mRNA_P-littoralis_Contig191.96.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig191.96.2 vs. uniprot
Match: D7G7Z6_ECTSI (START domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Z6_ECTSI) HSP 1 Score: 488 bits (1255), Expect = 1.340e-154 Identity = 292/543 (53.78%), Postives = 340/543 (62.62%), Query Frame = 1
Query: 448 TGALLFKRTRTDGLQRQHQPGASSKGGKGKGGKRGKVKEDVAWLLEDTRDGGWEPIRDDGHVQVWKRSMPNSDFVAIKSKASLAVSPQALFEVLTPGDIEIVRQYNPLVEDGNDLEVIDRDNKISWSATTGVWPCRPRDFVTHIQRATLDDGSVAIVNSATTHPKAPAKGQYVRGEILHGVFHIKAAKNKKHSEFTMVHHFNPGGNIPPWLINWLAEGKPITFVRKLEEVARKWDKQAALTKSMPCKGRGFADKPCAFLLPPTDDSQDSDGMGSRAPEAGRG----WSAFRTAVTLAMLACCGWVLCFGWPSSLEKAGVARSPAAAAVAAAAPVKVPRKENGTPVDVADAIAHASCATHGAPEATPSLEPPSGSFQEARKDVVVLGEQVVEEAAGESS--EGGRAKYIERPNGEVPSEKVTTAAESAEDTHVG-GLIGGASASGEKDLLSSAPPPPSAPVMAIAVEIAETPGEDNWDLGRADIAHAVPSAQADPQADPQTPVCAGEVTRKELGTGALPCVEENGG-ETERCANTAALEPMNGE 2052
TGA LFKR RT+ + Q G GKGGKRGKVKEDVAWLLEDT DGGW+P+RDDGHVQVWKRSMPNSDFVAIKSKASLAVSPQALFEVLTPGDIEIVRQYNPLVEDG DLEVIDRDNK+SWSAT G+WPCRPRDFVTHIQRATL+DGSVAIVNSAT+HPKAPA G+YVRGEILHGVFHIKAAKNKKHSEFTMVHHF+PGGNIPPWL+NWLAEGKPITFVRKLEEVA+KWD+QAALTKSMPCKGRGFADKPCAFLLP D S++ D + W + A+T+A L W L F + K G +AA P ++P +E + A+ P L S VV+ G A GE + +G K + P+G+V + V A + G G + GA+A EK+ S P E P E+ L A+ A P++ +D + +P T GE+ + + GG E TA + GE
Sbjct: 4 TGASLFKRKRTNSKEVQPSGGVPF----GKGGKRGKVKEDVAWLLEDTSDGGWKPVRDDGHVQVWKRSMPNSDFVAIKSKASLAVSPQALFEVLTPGDIEIVRQYNPLVEDGIDLEVIDRDNKVSWSATMGIWPCRPRDFVTHIQRATLEDGSVAIVNSATSHPKAPAGGKYVRGEILHGVFHIKAAKNKKHSEFTMVHHFSPGGNIPPWLMNWLAEGKPITFVRKLEEVAKKWDRQAALTKSMPCKGRGFADKPCAFLLPTGDSSEEGDTLAXXXXXXXXXXXXEWGSLVKALTMAALLAYAWALFFDRRAVFGKKGEP--------SAAGPGRMPAEEKSGTLHSRVAL----------PAKHEKLAVISREQSAGVPAVVISGAVPHAHADGEKAGPDGRDVKDLRGPSGDVQHDDVLMAEGGGGEVVPGRGELAGATA--EKEDPSPTP-------------AREAPREECGAL--AERAEVPPASSSDSREEPDTSFLDGEIANGGIAGQVEGSISRGGGVEVTNSGPTAVASAIGGE 507
BLAST of mRNA_P-littoralis_Contig191.96.2 vs. uniprot
Match: A0A6H5KXT6_9PHAE (START domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXT6_9PHAE) HSP 1 Score: 488 bits (1256), Expect = 1.810e-154 Identity = 252/354 (71.19%), Postives = 278/354 (78.53%), Query Frame = 1
Query: 352 MVSVARRR----PARARLAGVGSLMSLMLFVLSISSTGALLFKRTRTDGLQRQHQPGASSKGGKGKGGKRGKVKEDVAWLLEDTRDGGWEPIRDDGHVQVWKRSMPNSDFVAIKSKASLAVSPQALFEVLTPGDIEIVRQYNPLVEDGNDLEVIDRDNKISWSATTGVWPCRPRDFVTHIQRATLDDGSVAIVNSATTHPKAPAKGQYVRGEILHGVFHIKAAKNKKHSEFTMVHHFNPGGNIPPWLINWLAEGKPITFVRKLEEVARKWDKQAALTKSMPCKGRGFADKPCAFLLPPTDDSQDSDGMGSRAPEA----GRGWSAFRTAVTLAMLACCGWVLCFGWPSSLEKAG 1389
M + RRR A ARL ++ L+L + + TGA LFKR RT+ + H G G GK RGKVKEDVAWLLEDT DGGW+P+RDDGHVQVWKRSMPNSDFVAIKSKASLAVSPQALFEVLTPGDIEIVRQYNPLVEDG DLEVIDRDNK+SWSAT G+WPCRPRDFVTHIQRATL+DGSVAIVNSAT+HPKAP +YVRGEILHGVFHIKAAKNKKHSEFTMVHHF+PGGNIPPWL+NWLAEGKPITFVRKLEEVA+KWD+QAALTKSMPCKGRGFADKPC FLLP D S++ D + + A A G W + A+TLA L W L F P+ K G
Sbjct: 1 MAPIPRRRWNGSAAAARL-----VLGLVLLLTVMGPTGASLFKRKRTNSKE-VHPSGGVPFGKGGKXXXRGKVKEDVAWLLEDTSDGGWKPVRDDGHVQVWKRSMPNSDFVAIKSKASLAVSPQALFEVLTPGDIEIVRQYNPLVEDGIDLEVIDRDNKVSWSATMGIWPCRPRDFVTHIQRATLEDGSVAIVNSATSHPKAPVGEKYVRGEILHGVFHIKAAKNKKHSEFTMVHHFSPGGNIPPWLMNWLAEGKPITFVRKLEEVAKKWDQQAALTKSMPCKGRGFADKPCDFLLPTGDSSEEGDTLAAPARAAAGSGGGEWGSLVKALTLAALLAYAWALFFDRPAVFGKKG 348
BLAST of mRNA_P-littoralis_Contig191.96.2 vs. uniprot
Match: A0A835YMA7_9STRA (START domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMA7_9STRA) HSP 1 Score: 224 bits (570), Expect = 3.950e-59 Identity = 117/248 (47.18%), Postives = 153/248 (61.69%), Query Frame = 1
Query: 562 EDVAWLLEDTRDGGWEPIRDDGHVQVWKRSMPNSDFVAIKSKASLAVSPQALFEVLTPGDIEIVRQYNPLVEDGNDLEVIDRDNKISWSATTGVWPCRPRDFVTHIQRATLDDGSVAIVNSATTHPKAPAKG---QYVRGEILHGVFHIKAAKNKKH-SEFTMVHHFNPGGNIPPWLINWLAEGKPITFVRKLEEVARKWDKQAALT-------------KSMPCKGRGFADKPCAFLLPPTDDSQDS 1254
+D+ WLL GWEP+ D G QVWK +MP+S F+ +K+ A++ SP AL EVL PG+++IV+ YNP++ +G D+E + RD+KISWS+T +WPCR RDFVT I R L DG AI+ ATTHP+ PA G VR EILHG+F ++ + H S+FTMV H NPGG IP WL N LA P +FV L VA+++D AA T +S PC RGF PC +LL T + S
Sbjct: 46 KDMEWLLSGEL--GWEPVLD-GETQVWKMTMPDSAFIFVKAMATIDASPVALREVLAPGELDIVKMYNPVITEGRDIEYLGRDSKISWSSTMPMWPCRGRDFVTFINRIRLPDGGTAIIQKATTHPQYPAPGPGYDTVRAEILHGLFLVQPVPGESHRSQFTMVQHLNPGGKIPAWLTNQLAARTPASFVTALGRVAQRFDAVAAATANDATTTKGSKGSRSGPCFDRGFDSPPCPWLLNMTQGTSTS 290
BLAST of mRNA_P-littoralis_Contig191.96.2 vs. uniprot
Match: A0A7S4NFJ2_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NFJ2_GUITH) HSP 1 Score: 100 bits (249), Expect = 1.820e-19 Identity = 62/211 (29.38%), Postives = 98/211 (46.45%), Query Frame = 1
Query: 568 VAWLLEDTRDGGWEPIRDDGHVQVWKRSMPNS------------DFVAIKSKASLAVSPQALFEVLTPGDIEIVRQYNPLVEDGNDLEVIDRDNKISWSATTGVWPCRPRDFVTHIQRATLDDGSVAIVNSATTHPKAPAKGQYVRGEILHGVFHIKAAK------NKKHSEFTMVHHFNPGG----NIPPWLINWLAEGKPITFVRKLEE 1134
V +L + W I D ++VW+ +P S F + S L P+ ++ D V +YN + DLE +D + KI+WSA+ V P + RDFVT + T DGS+ I N A HPKAP +++R EI+ G ++ A+ + + T++ H NPGG + ++N A PI F++ L +
Sbjct: 14 VEKILTICGEASWTQISDSDGIKVWRTMLPESLQIAGRPLGPSAKFFCVMSSGILDAPPEQVYTYFV--DNSRVHEYNEFCKQVKDLEYLDANTKITWSASGRVGPFKERDFVTRVHYRTASDGSLIIANRAEKHPKAPETERFLRMEIMIGGNVLRPAREADGSLDHSRTNITVLTHVNPGGIAETRLGTMILNSAAASGPIKFIQGLRQ 222
BLAST of mRNA_P-littoralis_Contig191.96.2 vs. uniprot
Match: A0A7S0I3S0_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0I3S0_9CRYP) HSP 1 Score: 104 bits (259), Expect = 4.600e-19 Identity = 72/232 (31.03%), Postives = 109/232 (46.98%), Query Frame = 1
Query: 529 KGKGGKRGK-------VKED-VAWLLEDTRDGGWEPIRDDGHVQVWKRSMPNSDFVA------------IKSKASLAVSPQALFEVLTPGDIEIVRQYNPLVEDGNDLEVIDRDNKISWSATTGVWPCRPRDFVTHIQRATLDDGSVAIVNSATTHPKAPAKGQYVRGEILHGVFHIKAAKNKKHS------EFTMVHHFNPGG----NIPPWLINWLAEGKPITFVRKLEE 1134
KGKGG GK V +D V +L + W I D ++VW+ +P+S VA + S L P+ ++ D V +YN + DLE +D + KI+WSA+ V P + RDFVT + T DGS+ I N A THP AP +++R EI+ G ++ + + S T++ H NPGG + ++N A PI F++ L +
Sbjct: 352 KGKGGDEGKELTGLDAVNDDLVEKILTICSEASWTQISDSDGIKVWRTMLPDSLLVAGRPLGPSAKFYCVMSSGVLDAPPEQVYTYFV--DNSRVHEYNEFCKQVKDLEYLDANTKITWSASGRVGPFKERDFVTRVHYRTAPDGSLIIANRAETHPTAPETDRFLRMEIMIGGNVLRPVREEDGSLDHSRTNITVLTHVNPGGIAETRLGTMILNSAAASGPIKFIQGLRQ 581
BLAST of mRNA_P-littoralis_Contig191.96.2 vs. uniprot
Match: A0A7S4K5H3_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4K5H3_GUITH) HSP 1 Score: 86.7 bits (213), Expect = 1.210e-15 Identity = 49/152 (32.24%), Postives = 72/152 (47.37%), Query Frame = 1
Query: 568 VAWLLEDTRDGGWEPIRDDGHVQVWKRSMPNS------------DFVAIKSKASLAVSPQALFEVLTPGDIEIVRQYNPLVEDGNDLEVIDRDNKISWSATTGVWPCRPRDFVTHIQRATLDDGSVAIVNSATTHPKAPAKGQYVRGEILHG 987
V +L + W I D ++VW+ +P S F + S L P+ ++ D V +YN + DLE +D + KI+WSA+ V P + RDFVT + T DGS+ I N A HPKAP +++R EI+ G
Sbjct: 14 VEKILTICGEASWTQISDSDGIKVWRTMLPESLQIAGRPLGPSAKFFCVMSSGILDAPPEQVYTYFV--DNSRVHEYNEFCKQVKDLEYLDANTKITWSASGRVGPFKERDFVTRVHYRTASDGSLIIANRAEKHPKAPETERFLRMEIMIG 163
BLAST of mRNA_P-littoralis_Contig191.96.2 vs. uniprot
Match: B8CFB1_THAPS (START domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CFB1_THAPS) HSP 1 Score: 83.2 bits (204), Expect = 2.570e-12 Identity = 65/231 (28.14%), Postives = 99/231 (42.86%), Query Frame = 1
Query: 577 LLEDTRDG-GWEPI----------RDDGHVQVWKRSMPNS------------DFVAIKSKASLAVSPQALFEVLTPGDIEIVRQYNPLVEDGNDLEVIDRDNKISWSATTGVWPCRPRDFVTHIQRATLDDGSVAIVNSATTHPKAPA-----KGQYVRGEILHGVFHIKAAKNKKH-SEFTMVHHFNPGGNIPPWLINWLAEG----KPITFVRKLEEVARKWDKQAALT 1170
L E+ R G GW+ I DG +V+ + +P+S ++ IK +++ + L + + V QYN LVED D+EVI +KI+W+ V +PRDFVT DG+ IVN A H P +G RG L G I + H + T++ H NPGG +P W +N +P + E A + + A+ +
Sbjct: 486 LFEEERAGDGWKTISCNSFVKKKFNKDGRTEVYLKWLPDSREEYVDKDNAEQEYPCIKCYSTIDAPMDQVCAFLA--NEKTVPQYNELVEDHADVEVITPHSKITWTLMPKVLFVKPRDFVTFCSHRWKRDGTQVIVNQACDHEDVPGNMVEGEGDVTRGFALRGANFISKDPDDPHKTRITILAHANPGGGLPQWALNTAVNAAVQIEPFKLFYSINEGASNYKESASFS 714
BLAST of mRNA_P-littoralis_Contig191.96.2 vs. uniprot
Match: A0A3P6T7K2_LITSI (START domain-containing protein n=1 Tax=Litomosoides sigmodontis TaxID=42156 RepID=A0A3P6T7K2_LITSI) HSP 1 Score: 76.6 bits (187), Expect = 3.140e-11 Identity = 54/183 (29.51%), Postives = 93/183 (50.82%), Query Frame = 1
Query: 631 VQVWKRSMPNSDFVAIKSKASLAVSPQAL-FEVLTPGDIEIVRQYNPLVEDGNDLEVIDRDNKISWSATTGVWPCRPRDFVTHIQRATLDDGSVA-IVNSATTHPKAPAKGQYVRGEILHGVFHIKAAKNKKHSEFTMVHHFNPGGN-------IPPWLINWLAEGKPITFVRKLEEVARKWD 1152
V VW +S+PNS+ IK+KA L P + ++VL D + +++ D+ +I+ +N I + A G+ P +PRDFV +QR+ LD+G I + H K P Y+RG + ++I+ ++ + T ++H +PGG +P WL N LA+ ++ L K++
Sbjct: 53 VNVWTKSVPNSNLQMIKAKAVLTGVPASTAYDVLH--DPQYRSKWDKYHVATVDVGLINPNNDICYYAVGGIPPLQPRDFV--LQRSWLDNGKEKYICGHSVCHKKCPPVKGYIRGIVYLTAYYIRNT-DENSCQITYINHSDPGGTDIRFSGKVPTWLTNHLAKVIGPKLIKNLHNACLKYE 230
BLAST of mRNA_P-littoralis_Contig191.96.2 vs. uniprot
Match: A0A448ZKN5_9STRA (START domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZKN5_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 7.100e-8 Identity = 45/149 (30.20%), Postives = 70/149 (46.98%), Query Frame = 1
Query: 754 RQYNPLVEDGNDLEVIDRDNKISWSATTGVWPCRPRDFVTHIQRATLDDGSVAIVNSATTHPKAP-----AKGQY-------VRGEILHGVFHIKAAKN--KKHSEFTMVHHFNPGGNIPPWLINW----LAEGKPITFVRKLEEVARK 1146
R+YN L+ D D+EV+ +KI WS + + +PRDFVT+ + L DG+ I N A HP A + GQ R L G ++ + K ++ M+ H N G ++P W + LA KP + +++ RK
Sbjct: 170 REYNSLLIDQEDVEVLTPHSKICWSQSKKLLFIQPRDFVTYCRHRWLKDGTQLITNQACDHPNATLNITGSNGQNSIRNLSGYRAFSLRGATYVSRCPDFPSKRTKIVMLSHCNCGRDVPEWAVRAAVGVLAPIKPFEIIHRIDVGIRK 318
BLAST of mRNA_P-littoralis_Contig191.96.2 vs. uniprot
Match: A0A3N7D178_9SPHI (Lipid-binding protein n=1 Tax=Pedobacter sp. KBW06 TaxID=2153359 RepID=A0A3N7D178_9SPHI) HSP 1 Score: 62.8 bits (151), Expect = 4.230e-7 Identity = 46/203 (22.66%), Postives = 91/203 (44.83%), Query Frame = 1
Query: 568 VAWLLEDTRDGGWEPIRDDGHVQVWKRSMPNSDFVAIKSKASLAVSPQALFEVLTPGDIEIVRQYNPLVEDGNDLEVIDRDNKISWSATTGVWPCRPRDFVTHIQRATLDDGSVAIVNSATTHPKAPAKGQYVRGEILHGVFHIK-AAKNKKHSEFTMVHHFNPGGNIPPWLINWLAEGKPITFVRKLE-EVARKWDKQAALT 1170
+A + W P + ++++ PNS A+K++ ++ + + +L D+E + + + ++ + +S + WP + RDFV H++ + V ++ + K VR + G + I A + + E+T+ H +PGG +PPWLIN A P+ ++ L+ +V + K A LT
Sbjct: 12 IAKTVPVLAQNNWVPEVEKEGIKIYTAVFPNSRIKAVKAQCNVKATASQVVALLM--DVESATDWVYHTKSCSLIKKVSPAELYYYSEISLPWPLQNRDFVAHLKVSQNTGTKVVTIDGPAVRGQVAEKKGIVRIQDSKGKWVISPAGPDYVNIEYTI--HVDPGGTLPPWLINLFASEGPLKIIKNLKIQVQKPEYKNAVLT 210 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig191.96.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig191.96.2 >prot_P-littoralis_Contig191.96.2 ID=prot_P-littoralis_Contig191.96.2|Name=mRNA_P-littoralis_Contig191.96.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=592bp MTRHGSCRWMVSVARRRPARARLAGVGSLMSLMLFVLSISSTGALLFKRTback to top mRNA from alignment at P-littoralis_Contig191:344592..353307+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig191.96.2 ID=mRNA_P-littoralis_Contig191.96.2|Name=mRNA_P-littoralis_Contig191.96.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=8716bp|location=Sequence derived from alignment at P-littoralis_Contig191:344592..353307+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig191:344592..353307+ >mRNA_P-littoralis_Contig191.96.2 ID=mRNA_P-littoralis_Contig191.96.2|Name=mRNA_P-littoralis_Contig191.96.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1776bp|location=Sequence derived from alignment at P-littoralis_Contig191:344592..353307+ (Pylaiella littoralis U1_48)back to top |