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Homology
BLAST of mRNA_P-littoralis_Contig1.136.4 vs. uniprot
Match: D8LNC2_ECTSI (COP9 signalosome complex subunit 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNC2_ECTSI) HSP 1 Score: 731 bits (1886), Expect = 1.520e-261 Identity = 375/461 (81.34%), Postives = 404/461 (87.64%), Query Frame = 1
Query: 142 TDVGLENSYYSAKALKAEDPKAAVEAFREIMANEEGQGIWGFKALKQLMKLLFSMSAFKEFTECYTQLLGYTRGAVSQNVGEKGVNSVLDYVSSSNDWNLLKGFYEQTLDTLREHKNNRLWFKCNLKLGHLMYEVGEMGRLQRIIKELLRACKTEGIGDDDGSNAVKRGTQLLEIFALQILMHSRQRDKKKLREVYERAQRVTSAVPHPRTLATILECGGKMHMQQEREWDHACTAFFQSFKNYDEAGDPERLQVLKYLVMASILHESKIDPFDSQEAKPYKEDPEIVAMTNLVTAFRNKQIKDFERILKTHHASLMGDPFIKLYMDDILRTMRTQ------------VLLKAIAPYTRVRLPYLASELNGIPVSDVEDLLVSLILDGKVDGKIDQVNEVVLCGKTFIPRGAGGGTDAPVALGSGSASGPGAPTRTALALERWAEALCTLSANVVAKVNCR 1488
TDVGLENSYYSAKALKAEDPKAAVEAFRE+MA EE QGIWGFKALKQ+MKLLF MSAF+EFT+CYTQLLGYT+GAVSQNVGEKGVNSVLDYVSSSNDW LLKGFYEQTLDTLREHKNNRLWFKCNLKLGHLMY+VGEMGRLQRIIKELL+ACK EG GDDD +NAVKRGTQLLEIF+LQILMHSRQRD+KKLREVYERA+++TSAVPHPR +ATILECGGKMHMQ EREWD ACTAFFQSFKNYDEAGDPERLQVLKYLVMASILH+S+IDPFDSQEAKPYK+DPEIVAMTNLV AFRNKQIKDFERILKTH ASLMGDPFIKLY+DDILRTMRTQ VLLKAIAPYTRV+LPYLA ELN IPV+DVEDLLVS ILDGKVDGKIDQVN+VVLCGK G ++A TA+ALERWAE+L +L+ N+ AKV+ R
Sbjct: 51 TDVGLENSYYSAKALKAEDPKAAVEAFREVMAQEEEQGIWGFKALKQMMKLLFKMSAFQEFTDCYTQLLGYTKGAVSQNVGEKGVNSVLDYVSSSNDWGLLKGFYEQTLDTLREHKNNRLWFKCNLKLGHLMYDVGEMGRLQRIIKELLKACKNEGNGDDDDTNAVKRGTQLLEIFSLQILMHSRQRDQKKLREVYERARKITSAVPHPRVVATILECGGKMHMQ-EREWDQACTAFFQSFKNYDEAGDPERLQVLKYLVMASILHKSEIDPFDSQEAKPYKQDPEIVAMTNLVEAFRNKQIKDFERILKTHRASLMGDPFIKLYIDDILRTMRTQKVSIMSNNTHFQVLLKAIAPYTRVKLPYLAGELNDIPVTDVEDLLVSCILDGKVDGKIDQVNQVVLCGKVCPAAGGPASSEAGAXXXXXXXXXXXXXXXTAVALERWAESLRSLNTNIAAKVDYR 510
BLAST of mRNA_P-littoralis_Contig1.136.4 vs. uniprot
Match: UPI000D0C7A97 (COP9 signalosome complex subunit 2 n=1 Tax=Halyomorpha halys TaxID=286706 RepID=UPI000D0C7A97) HSP 1 Score: 425 bits (1093), Expect = 3.180e-142 Identity = 208/389 (53.47%), Postives = 300/389 (77.12%), Query Frame = 1
Query: 145 DVGLENSYYSAKALKAEDPKAAVEAFREIMANEEGQ-GIWGFKALKQLMKLLFSMSAFKEFTECYTQLLGYTRGAVSQNVGEKGVNSVLDYVSSSNDWNLLKGFYEQTLDTLREHKNNRLWFKCNLKLGHLMYEVGEMGRLQRIIKELLRACKTEGIGDDDGSNAVKRGTQLLEIFALQILMHSRQRDKKKLREVYERAQRVTSAVPHPRTLATILECGGKMHMQQEREWDHACTAFFQSFKNYDEAGDPERLQVLKYLVMASILHESKIDPFDSQEAKPYKEDPEIVAMTNLVTAFRNKQIKDFERILKTHHASLMGDPFIKLYMDDILRTMRTQVLLKAIAPYTRVRLPYLASELNGIPVSDVEDLLVSLILDGKVDGKIDQVNEVV 1308
DV LEN YY++KALK +DPK A+++F++++ E G+ G WGFKALKQ++K+ F ++ F+E E Y LL Y + AV++N EK +NS+LDY+S+S + +LL+ FYE TL+ L++ KN+RLWFK N KLG L Y++G+ +L +IIK+L ++CKT DDG + +K+GTQLLEI+AL+I M++ Q++ KKL+ +YE++ + SA+PHP + I ECGGKMH++ E E++ A T FF++FKNYDE+G P R LKYLV+A++L +S I+PFDSQEA PYK DPEI+AMTNLV++++N I +FE+ILK H ++M DPFIK +++D+LR +RT+VL+K I PYTR+ +P+++ ELN I V+DVE LLVS ILD V+GKIDQVN+V+
Sbjct: 30 DVNLENQYYNSKALKEDDPKLALDSFQKVLELESGEKGEWGFKALKQMIKIFFKLNEFQEMMEKYLLLLTYIKSAVTRNHSEKSINSILDYISTSKNMDLLQNFYEATLEALKDAKNDRLWFKTNTKLGKLYYDIGDYSKLAKIIKQLHQSCKT-----DDGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLR-EGEYEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLMKSGINPFDSQEAIPYKNDPEILAMTNLVSSYQNNDINEFEQILKNHEKNIMDDPFIKEHIEDLLRNIRTKVLIKLIKPYTRLHIPFISKELN-IDVADVESLLVSCILDKSVNGKIDQVNQVL 411
BLAST of mRNA_P-littoralis_Contig1.136.4 vs. uniprot
Match: N6TIN0_DENPD (COP9 signalosome complex subunit 2 (Fragment) n=20 Tax=Polyphaga TaxID=41084 RepID=N6TIN0_DENPD) HSP 1 Score: 424 bits (1089), Expect = 1.160e-141 Identity = 218/446 (48.88%), Postives = 316/446 (70.85%), Query Frame = 1
Query: 145 DVGLENSYYSAKALKAEDPKAAVEAFREIMANEEGQ-GIWGFKALKQLMKLLFSMSAFKEFTECYTQLLGYTRGAVSQNVGEKGVNSVLDYVSSSNDWNLLKGFYEQTLDTLREHKNNRLWFKCNLKLGHLMYEVGEMGRLQRIIKELLRACKTEGIGDDDGSNAVKRGTQLLEIFALQILMHSRQRDKKKLREVYERAQRVTSAVPHPRTLATILECGGKMHMQQEREWDHACTAFFQSFKNYDEAGDPERLQVLKYLVMASILHESKIDPFDSQEAKPYKEDPEIVAMTNLVTAFRNKQIKDFERILKTHHASLMGDPFIKLYMDDILRTMRTQVLLKAIAPYTRVRLPYLASELNGIPVSDVEDLLVSLILDGKVDGKIDQVNEVVLCGKTFIPRGAGGGTDAPVALGSGSASGPGAPTRTALALERWAEALCTLSANVVAKV 1479
DV LEN YY++KALK E+P+AA+ +F++++ E G+ G WGFKALKQ++K+ F +S + E Y QLL Y + AV++N EK +NS+LDY+S+S + LL+ FYE TL+ L++ KN+RLWFK N KLG L Y+ G+ +L +I+K+L ++C+T DDG + +K+GTQLLEI+AL+I M++ Q++ KKL+ +YE++ + SA+PHP + I ECGGKMH++ E E++ A T FF++FKNYDE+G P R LKYLV+A++L +S I+PFDSQEAKPYK DPEI+AMTNLVTA++N I DFE ILK + ++M DPFI+ +++D+LR +RTQVL+K I PYTR+++P++++ELN I V +VE LLV+ ILD + G+IDQVN+V+ + I T +AL+RWA L TL A++V K+
Sbjct: 27 DVDLENQYYNSKALKEEEPRAALTSFQKVLDLEGGEKGEWGFKALKQMIKINFRLSNYDEMMRRYKQLLTYIKSAVTRNHSEKSINSILDYISTSRNMELLQNFYETTLEALKDAKNDRLWFKTNTKLGKLYYDRGDFNKLGKILKQLHQSCRT-----DDGEDDLKKGTQLLEIYALEIQMYTTQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLR-EGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVTAYQNNDINDFEYILKQNRQNIMDDPFIREHIEDLLRNIRTQVLIKLIKPYTRIQIPFISTELN-IDVQEVESLLVACILDNTIQGRIDQVNQVLFLERRTIN------------------------TARYIALDRWANQLSTLHASIVNKM 441
BLAST of mRNA_P-littoralis_Contig1.136.4 vs. uniprot
Match: A0A7S3W5Y9_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3W5Y9_9SPIT) HSP 1 Score: 422 bits (1085), Expect = 3.680e-141 Identity = 220/445 (49.44%), Postives = 302/445 (67.87%), Query Frame = 1
Query: 145 DVGLENSYYSAKALKAEDPKAAVEAFREIMANEEGQGIWGFKALKQLMKLLFSMSAFKEFTECYTQLLGYTRGAVSQNVGEKGVNSVLDYVSSSNDWNLLKGFYEQTLDTLREHKNNRLWFKCNLKLGHLMYEVGEMGRLQRIIKELLRACKTEGIGDDDGSNAVKRGTQLLEIFALQILMHSRQRDKKKLREVYERAQRVTSAVPHPRTLATILECGGKMHMQQEREWDHACTAFFQSFKNYDEAGDPERLQVLKYLVMASILHESKIDPFDSQEAKPYKEDPEIVAMTNLVTAFRNKQIKDFERILKTHHASLMGDPFIKLYMDDILRTMRTQVLLKAIAPYTRVRLPYLASELNGIPVSDVEDLLVSLILDGKVDGKIDQVNEVVLCGKTFIPRGAGGGTDAPVALGSGSASGPGAPTRTALALERWAEALCTLSANVVAKV 1479
DV +EN YYS+KAL+ D + AVE F+E+ E +G WGFKA K ++KL F + E Y ++L Y R AV++N EK +N +LD VSSS LL+ YE TL L+E KN RLWFK NLKLG L ++ + GRLQRIIKEL +AC+ DG+ + +GTQLLE++AL+I M++ ++ KKL+ +YE+A ++ SA+PHP+ + I ECGGKMHM REW+ A FF +FKNYDEAG R+ LKYL+++++L S I PFDSQEAKPYK DPEI+AMTNL++A+ N +I++FE++LK H AS+MGD FIKLY+DD+L+ +RTQVLL+ I PYTR+RL ++A+ELN IP+++VEDLLVSLILDG +DG +DQ+ ++L + AG T+ ALE+W++ L TL V K+
Sbjct: 20 DVNIENQYYSSKALRETDEEGAVEGFKEVAEMESSKGEWGFKAYKMIVKLQFKRGKWAEMMAAYKEMLTYIRSAVTRNYSEKVINKILDLVSSSQQMELLQELYETTLSALQEAKNERLWFKTNLKLGKLWFDRAQYGRLQRIIKELNKACQNA-----DGTEDLSKGTQLLEVYALEIQMYTETKNNKKLQCLYEKALQIKSAIPHPKIMGVIRECGGKMHMSL-REWEMARNDFFDAFKNYDEAGISRRIHCLKYLILSNMLMNSDISPFDSQEAKPYKNDPEILAMTNLLSAYMNNEIREFEKVLKQHSASVMGDAFIKLYLDDLLKNIRTQVLLRVIRPYTRIRLSFIATELN-IPLNEVEDLLVSLILDGHIDGHVDQIGSLLL-----LADKAG-------------------DTKKYNALEKWSKQLATLQQTVYNKL 433
BLAST of mRNA_P-littoralis_Contig1.136.4 vs. uniprot
Match: A0A8H7PN60_MORIS (COP9 signalosome complex subunit 2 n=2 Tax=Umbelopsis TaxID=64561 RepID=A0A8H7PN60_MORIS) HSP 1 Score: 422 bits (1086), Expect = 3.750e-141 Identity = 206/390 (52.82%), Postives = 297/390 (76.15%), Query Frame = 1
Query: 145 DVGLENSYYSAKALKAEDPKAAVEAFREIMANEEGQGIWGFKALKQLMKLLFSMSAFKEFT----ECYTQLLGYTRGAVSQNVGEKGVNSVLDYVSSSNDWNLLKGFYEQTLDTLREHKNNRLWFKCNLKLGHLMYEVGEMGRLQRIIKELLRACKTEGIGDDDGSNAVKRGTQLLEIFALQILMHSRQRDKKKLREVYERAQRVTSAVPHPRTLATILECGGKMHMQQEREWDHACTAFFQSFKNYDEAGDPERLQVLKYLVMASILHESKIDPFDSQEAKPYKEDPEIVAMTNLVTAFRNKQIKDFERILKTHHASLMGDPFIKLYMDDILRTMRTQVLLKAIAPYTRVRLPYLASELNGIPVSDVEDLLVSLILDGKVDGKIDQVNE 1302
DV LEN YYSAKA K +D +AA++ F++++ EE +G WGFKALKQ++KL F + +++ + Y +LL YT+ AV++N EK +N++LDYVSSS+D ++ FY TL++L + KN+RLW K NLKL L + E RL +I+++L +C+ DDG++ ++GT LLEIFAL+I M++ ++ KKL+EVY++ RV SA+PHPR + I ECGGKMHM E+ WD A T FF+SFKNYDEAG +R+QVLKYLV+A++L ES+I+PFDSQE KPYK DP+IVAMTNLV+A++ K+I++FE+ILK +H+++MGD FI+ Y+DD+L+ +RTQVL++ I PYTR+ +P+++ +LN IPV DVE+LLV+LILD K+ G+IDQ+ +
Sbjct: 28 DVDLENKYYSAKARKEDDSEAAIQEFQDVVDTEEEKGDWGFKALKQMVKLSFQLGRYEDVSIPTIRYYEELLTYTKSAVTRNYSEKSINNILDYVSSSDDMAFMEKFYHTTLNSLMDSKNDRLWVKTNLKLAKLWLDRQEYSRLNKILRQLHTSCQK-----DDGTDDQRKGTHLLEIFALEIQMYTETKNNKKLKEVYQQCLRVKSAIPHPRIMGVIRECGGKMHMG-EKSWDQAQTDFFESFKNYDEAGSSQRIQVLKYLVLANMLTESQINPFDSQETKPYKNDPQIVAMTNLVSAYQKKEIREFEKILKENHSAIMGDSFIRTYIDDVLKNIRTQVLIRLIKPYTRIEIPFISKQLN-IPVEDVEELLVTLILDKKIAGRIDQIQQ 410
BLAST of mRNA_P-littoralis_Contig1.136.4 vs. uniprot
Match: CSN2_DANRE (COP9 signalosome complex subunit 2 n=322 Tax=Vertebrata TaxID=7742 RepID=CSN2_DANRE) HSP 1 Score: 422 bits (1084), Expect = 6.810e-141 Identity = 205/387 (52.97%), Postives = 298/387 (77.00%), Query Frame = 1
Query: 148 VGLENSYYSAKALKAEDPKAAVEAFREIMANEEGQGIWGFKALKQLMKLLFSMSAFKEFTECYTQLLGYTRGAVSQNVGEKGVNSVLDYVSSSNDWNLLKGFYEQTLDTLREHKNNRLWFKCNLKLGHLMYEVGEMGRLQRIIKELLRACKTEGIGDDDGSNAVKRGTQLLEIFALQILMHSRQRDKKKLREVYERAQRVTSAVPHPRTLATILECGGKMHMQQEREWDHACTAFFQSFKNYDEAGDPERLQVLKYLVMASILHESKIDPFDSQEAKPYKEDPEIVAMTNLVTAFRNKQIKDFERILKTHHASLMGDPFIKLYMDDILRTMRTQVLLKAIAPYTRVRLPYLASELNGIPVSDVEDLLVSLILDGKVDGKIDQVNEVV 1308
V LEN YY++KALK +DPKAA+ +F++++ E +G WGFKALKQ++K+ F ++ F E Y QLL Y R AV++N EK +NS+LDY+S+S +LL+ FYE TL+ L++ KN+RLWFK N KLG L E E G+LQ+I+++L ++C+T DDG + +K+GTQLLEI+AL+I M++ Q++ KKL+ +YE++ + SA+PHP + I ECGGKMH++ E E++ A T FF++FKNYDE+G P R LKYLV+A++L +S I+PFDSQEAKPYK DPEI+AMTNLV+A++N I +FE+ILKT+H+++M DPFI+ +++++LR +RTQVL+K I PYTR+ +P+++ ELN I V+DVE LLV ILD ++G+IDQVN+++
Sbjct: 30 VDLENQYYNSKALKEDDPKAALSSFQKVLELEGEKGEWGFKALKQMIKINFKLTNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYISTSKQMDLLQEFYETTLEALKDAKNDRLWFKTNTKLGKLYLEREEFGKLQKILRQLHQSCQT-----DDGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLR-EGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELN-IDVADVESLLVQCILDNTINGRIDQVNQLL 409
BLAST of mRNA_P-littoralis_Contig1.136.4 vs. uniprot
Match: A0A7M4FAY3_CROPO (COP9 signalosome complex subunit 2 n=7 Tax=Euteleostomi TaxID=117571 RepID=A0A7M4FAY3_CROPO) HSP 1 Score: 421 bits (1081), Expect = 9.220e-141 Identity = 205/387 (52.97%), Postives = 297/387 (76.74%), Query Frame = 1
Query: 148 VGLENSYYSAKALKAEDPKAAVEAFREIMANEEGQGIWGFKALKQLMKLLFSMSAFKEFTECYTQLLGYTRGAVSQNVGEKGVNSVLDYVSSSNDWNLLKGFYEQTLDTLREHKNNRLWFKCNLKLGHLMYEVGEMGRLQRIIKELLRACKTEGIGDDDGSNAVKRGTQLLEIFALQILMHSRQRDKKKLREVYERAQRVTSAVPHPRTLATILECGGKMHMQQEREWDHACTAFFQSFKNYDEAGDPERLQVLKYLVMASILHESKIDPFDSQEAKPYKEDPEIVAMTNLVTAFRNKQIKDFERILKTHHASLMGDPFIKLYMDDILRTMRTQVLLKAIAPYTRVRLPYLASELNGIPVSDVEDLLVSLILDGKVDGKIDQVNEVV 1308
V LEN YY++KALK +DPKAA+ +F++++ E +G WGFKALKQ++K+ F ++ F E Y QLL Y R AV++N EK +NS+LDY+S+S +LL+ FYE TL+ L++ KN+RLWFK N KLG L E E G+LQ+I+++L ++C+T DDG + +K+GTQLLEI+AL+I M++ Q++ KKL+ +YE++ + SA+PHP + I ECGGKMH++ E E++ A T FF++FKNYDE+G P R LKYLV+A++L +S I+PFDSQEAKPYK DPEI+AMTNLV+A++N I +FE+ILKT+H+++M DPFI+ +++++LR +RTQVL+K I PYTR+ +P+++ ELN I V+DVE LLV ILD + G+IDQVN+++
Sbjct: 15 VDLENQYYNSKALKEDDPKAALSSFQKVLELEGEKGEWGFKALKQMIKINFKLTNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYISTSKQMDLLQEFYETTLEALKDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQT-----DDGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLR-EGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELN-IDVADVESLLVQCILDNTIHGRIDQVNQLL 394
BLAST of mRNA_P-littoralis_Contig1.136.4 vs. uniprot
Match: A0A397UQX1_9GLOM (COP9 signalosome complex subunit 2 n=14 Tax=Eukaryota TaxID=2759 RepID=A0A397UQX1_9GLOM) HSP 1 Score: 421 bits (1083), Expect = 9.640e-141 Identity = 208/409 (50.86%), Postives = 292/409 (71.39%), Query Frame = 1
Query: 76 YIMGDEEXXXXXXXXXXXXXXXTDVGLENSYYSAKALKAEDPKAAVEAFREIMANEEGQGIWGFKALKQLMKLLFSMSAFKEFTECYTQLLGYTRGAVSQNVGEKGVNSVLDYVSSSNDWNLLKGFYEQTLDTLREHKNNRLWFKCNLKLGHLMYEVGEMGRLQRIIKELLRACKTEGIGDDDGSNAVKRGTQLLEIFALQILMHSRQRDKKKLREVYERAQRVTSAVPHPRTLATILECGGKMHMQQEREWDHACTAFFQSFKNYDEAGDPERLQVLKYLVMASILHESKIDPFDSQEAKPYKEDPEIVAMTNLVTAFRNKQIKDFERILKTHHASLMGDPFIKLYMDDILRTMRTQVLLKAIAPYTRVRLPYLASELNGIPVSDVEDLLVSLILDGKVDGKIDQVNE 1302
+++ D+E DV LEN YYSAKA K EDP A++ F+ ++ E+ +G WGFKALKQ+ KL F + + Y QLL YT+ AV++N EK +N++LD++SSS D + ++ FY TL+ L E KN RLW K NLKL L + E RL +I+++L +C+ DDG++ ++GT LLEIFAL+I M++ ++ KKL+ +Y++ V SA+PHPR + I ECGGKMHM E+EWD A T FF+SFKNYDEAG P+R+QVLKYLV+A++L ES+I+PFDSQE KPYK DP+IVAMTNLV+A++ K+I++FE+IL+ + A++M DPFI+ Y+DD+L+ +RTQVLL+ I PYTR+ +P+++ +LN IP DVEDLLV L+LD K+ G IDQVN+
Sbjct: 6 FMLEDDEEEDYNFDYEDDDPEEPDVNLENKYYSAKARKEEDPTGAIKEFQSVVDTEQEKGDWGFKALKQMAKLSFKAGDHESTLKYYKQLLSYTKSAVTRNYSEKSINNILDFISSSQDMSFMEEFYSTTLNALEEAKNERLWVKTNLKLAKLWLDRKEYNRLNKILRQLHLSCQK-----DDGTDDQRKGTHLLEIFALEIQMYTETKNNKKLKALYQQCLHVKSAIPHPRIMGVIRECGGKMHMG-EKEWDKAQTDFFESFKNYDEAGSPQRIQVLKYLVLANMLTESQINPFDSQETKPYKNDPQIVAMTNLVSAYQRKEIREFEKILRDNRATIMDDPFIRTYIDDVLKNIRTQVLLRLIKPYTRIEIPFVSKQLN-IPAQDVEDLLVGLVLDQKIKGCIDQVNQ 407
BLAST of mRNA_P-littoralis_Contig1.136.4 vs. uniprot
Match: K7FTP5_PELSI (COP9 signalosome complex subunit 2 n=25 Tax=Amniota TaxID=32524 RepID=K7FTP5_PELSI) HSP 1 Score: 421 bits (1081), Expect = 1.060e-140 Identity = 205/387 (52.97%), Postives = 297/387 (76.74%), Query Frame = 1
Query: 148 VGLENSYYSAKALKAEDPKAAVEAFREIMANEEGQGIWGFKALKQLMKLLFSMSAFKEFTECYTQLLGYTRGAVSQNVGEKGVNSVLDYVSSSNDWNLLKGFYEQTLDTLREHKNNRLWFKCNLKLGHLMYEVGEMGRLQRIIKELLRACKTEGIGDDDGSNAVKRGTQLLEIFALQILMHSRQRDKKKLREVYERAQRVTSAVPHPRTLATILECGGKMHMQQEREWDHACTAFFQSFKNYDEAGDPERLQVLKYLVMASILHESKIDPFDSQEAKPYKEDPEIVAMTNLVTAFRNKQIKDFERILKTHHASLMGDPFIKLYMDDILRTMRTQVLLKAIAPYTRVRLPYLASELNGIPVSDVEDLLVSLILDGKVDGKIDQVNEVV 1308
V LEN YY++KALK +DPKAA+ +F++++ E +G WGFKALKQ++K+ F ++ F E Y QLL Y R AV++N EK +NS+LDY+S+S +LL+ FYE TL+ L++ KN+RLWFK N KLG L E E G+LQ+I+++L ++C+T DDG + +K+GTQLLEI+AL+I M++ Q++ KKL+ +YE++ + SA+PHP + I ECGGKMH++ E E++ A T FF++FKNYDE+G P R LKYLV+A++L +S I+PFDSQEAKPYK DPEI+AMTNLV+A++N I +FE+ILKT+H+++M DPFI+ +++++LR +RTQVL+K I PYTR+ +P+++ ELN I V+DVE LLV ILD + G+IDQVN+++
Sbjct: 12 VDLENQYYNSKALKEDDPKAALSSFQKVLELEGEKGEWGFKALKQMIKINFKLTNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYISTSKQMDLLQEFYETTLEALKDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQT-----DDGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLR-EGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELN-IDVADVESLLVQCILDNTIHGRIDQVNQLL 391
BLAST of mRNA_P-littoralis_Contig1.136.4 vs. uniprot
Match: A0A8D2QG32_ZONAL (COP9 signalosome complex subunit 2 n=4 Tax=Sauria TaxID=32561 RepID=A0A8D2QG32_ZONAL) HSP 1 Score: 421 bits (1081), Expect = 1.130e-140 Identity = 205/387 (52.97%), Postives = 297/387 (76.74%), Query Frame = 1
Query: 148 VGLENSYYSAKALKAEDPKAAVEAFREIMANEEGQGIWGFKALKQLMKLLFSMSAFKEFTECYTQLLGYTRGAVSQNVGEKGVNSVLDYVSSSNDWNLLKGFYEQTLDTLREHKNNRLWFKCNLKLGHLMYEVGEMGRLQRIIKELLRACKTEGIGDDDGSNAVKRGTQLLEIFALQILMHSRQRDKKKLREVYERAQRVTSAVPHPRTLATILECGGKMHMQQEREWDHACTAFFQSFKNYDEAGDPERLQVLKYLVMASILHESKIDPFDSQEAKPYKEDPEIVAMTNLVTAFRNKQIKDFERILKTHHASLMGDPFIKLYMDDILRTMRTQVLLKAIAPYTRVRLPYLASELNGIPVSDVEDLLVSLILDGKVDGKIDQVNEVV 1308
V LEN YY++KALK +DPKAA+ +F++++ E +G WGFKALKQ++K+ F ++ F E Y QLL Y R AV++N EK +NS+LDY+S+S +LL+ FYE TL+ L++ KN+RLWFK N KLG L E E G+LQ+I+++L ++C+T DDG + +K+GTQLLEI+AL+I M++ Q++ KKL+ +YE++ + SA+PHP + I ECGGKMH++ E E++ A T FF++FKNYDE+G P R LKYLV+A++L +S I+PFDSQEAKPYK DPEI+AMTNLV+A++N I +FE+ILKT+H+++M DPFI+ +++++LR +RTQVL+K I PYTR+ +P+++ ELN I V+DVE LLV ILD + G+IDQVN+++
Sbjct: 14 VDLENQYYNSKALKEDDPKAALSSFQKVLELEGEKGEWGFKALKQMIKINFKLTNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYISTSKQMDLLQEFYETTLEALKDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQT-----DDGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLR-EGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELN-IDVADVESLLVQCILDNTIHGRIDQVNQLL 393
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D8LNC2 |
| Preferred name | COPS2 |
| PFAMs | PCI |
| Model size | 1524 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K12176 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000003,GO:0000122,GO:0000338,GO:0000715,GO:0000909,GO:0002009,GO:0003006,GO:0003674,GO:0003712,GO:0003714,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006351,GO:0006355,GO:0006357,GO:0006366,GO:0006464,GO:0006508,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007281,GO:0007282,GO:0007283,GO:0007292,GO:0007293,GO:0007399,GO:0007517,GO:0007519,GO:0008134,GO:0008150,GO:0008152,GO:0008180,GO:0008230,GO:0008231,GO:0008283,GO:0008356,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009653,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0014706,GO:0016043,GO:0016070,GO:0016333,GO:0016922,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019827,GO:0019953,GO:0022008,GO:0022412,GO:0022414,GO:0023052,GO:0030154,GO:0030163,GO:0030182,GO:0030582,GO:0030584,GO:0030718,GO:0030727,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031647,GO:0031935,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0032774,GO:0032991,GO:0033043,GO:0033044,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0035257,GO:0035914,GO:0036099,GO:0036211,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043235,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044798,GO:0045892,GO:0045934,GO:0046483,GO:0046983,GO:0048134,GO:0048135,GO:0048138,GO:0048140,GO:0048142,GO:0048232,GO:0048468,GO:0048477,GO:0048513,GO:0048519,GO:0048523,GO:0048608,GO:0048609,GO:0048646,GO:0048699,GO:0048729,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050821,GO:0050896,GO:0051128,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0051301,GO:0051427,GO:0051704,GO:0051716,GO:0060255,GO:0060429,GO:0060537,GO:0060538,GO:0060968,GO:0061061,GO:0061458,GO:0065007,GO:0065008,GO:0070013,GO:0070646,GO:0070647,GO:0070791,GO:0071704,GO:0071840,GO:0075259,GO:0080090,GO:0090052,GO:0090054,GO:0090304,GO:0090575,GO:0097659,GO:0098727,GO:0140110,GO:1901360,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1902275,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 |
| Exons | 12 |
| Evalue | 4e-263 |
| EggNOG OGs | COG5159@1|root,KOG1464@2759|Eukaryota |
| Ec32 ortholog description | Proteasome component (PCI) domain |
| Ec32 ortholog | Ec-04_004400.1 |
| Description | protein deneddylation |
| Cds size | 1410 |
| COG category | O |
| BRITE | ko00000,ko04121 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680789314.3115368-UTR-P-littoralis_Contig1:808280..808313 | 1680789314.3115368-UTR-P-littoralis_Contig1:808280..808313 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig1 808281..808313 - |
| 1680789314.478554-UTR-P-littoralis_Contig1:820838..820919 | 1680789314.478554-UTR-P-littoralis_Contig1:820838..820919 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig1 820839..820919 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680789314.328301-CDS-P-littoralis_Contig1:808313..808511 | 1680789314.328301-CDS-P-littoralis_Contig1:808313..808511 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1 808314..808511 - |
| 1680789314.3367796-CDS-P-littoralis_Contig1:808909..809053 | 1680789314.3367796-CDS-P-littoralis_Contig1:808909..809053 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1 808910..809053 - |
| 1680789314.3503864-CDS-P-littoralis_Contig1:809398..809497 | 1680789314.3503864-CDS-P-littoralis_Contig1:809398..809497 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1 809399..809497 - |
| 1680789314.361226-CDS-P-littoralis_Contig1:809910..810057 | 1680789314.361226-CDS-P-littoralis_Contig1:809910..810057 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1 809911..810057 - |
| 1680789314.372686-CDS-P-littoralis_Contig1:810538..810625 | 1680789314.372686-CDS-P-littoralis_Contig1:810538..810625 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1 810539..810625 - |
| 1680789314.3829222-CDS-P-littoralis_Contig1:811618..811715 | 1680789314.3829222-CDS-P-littoralis_Contig1:811618..811715 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1 811619..811715 - |
| 1680789314.395169-CDS-P-littoralis_Contig1:812340..812469 | 1680789314.395169-CDS-P-littoralis_Contig1:812340..812469 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1 812341..812469 - |
| 1680789314.4076943-CDS-P-littoralis_Contig1:813286..813397 | 1680789314.4076943-CDS-P-littoralis_Contig1:813286..813397 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1 813287..813397 - |
| 1680789314.428543-CDS-P-littoralis_Contig1:814175..814305 | 1680789314.428543-CDS-P-littoralis_Contig1:814175..814305 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1 814176..814305 - |
| 1680789314.4402864-CDS-P-littoralis_Contig1:814686..814807 | 1680789314.4402864-CDS-P-littoralis_Contig1:814686..814807 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1 814687..814807 - |
| 1680789314.4515953-CDS-P-littoralis_Contig1:815223..815368 | 1680789314.4515953-CDS-P-littoralis_Contig1:815223..815368 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1 815224..815368 - |
| 1680789314.4660401-CDS-P-littoralis_Contig1:820836..820838 | 1680789314.4660401-CDS-P-littoralis_Contig1:820836..820838 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1 820837..820838 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1.136.4 >prot_P-littoralis_Contig1.136.4 ID=prot_P-littoralis_Contig1.136.4|Name=mRNA_P-littoralis_Contig1.136.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=470bp
MGDEEEEDYDFDYSDEEEEETDVGLENSYYSAKALKAEDPKAAVEAFREI MANEEGQGIWGFKALKQLMKLLFSMSAFKEFTECYTQLLGYTRGAVSQNV GEKGVNSVLDYVSSSNDWNLLKGFYEQTLDTLREHKNNRLWFKCNLKLGH LMYEVGEMGRLQRIIKELLRACKTEGIGDDDGSNAVKRGTQLLEIFALQI LMHSRQRDKKKLREVYERAQRVTSAVPHPRTLATILECGGKMHMQQEREW DHACTAFFQSFKNYDEAGDPERLQVLKYLVMASILHESKIDPFDSQEAKP YKEDPEIVAMTNLVTAFRNKQIKDFERILKTHHASLMGDPFIKLYMDDIL RTMRTQVLLKAIAPYTRVRLPYLASELNGIPVSDVEDLLVSLILDGKVDG KIDQVNEVVLCGKTFIPRGAGGGTDAPVALGSGSASGPGAPTRTALALER WAEALCTLSANVVAKVNCR* back to topmRNA from alignment at P-littoralis_Contig1:808281..820919- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig1.136.4 ID=mRNA_P-littoralis_Contig1.136.4|Name=mRNA_P-littoralis_Contig1.136.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=12639bp|location=Sequence derived from alignment at P-littoralis_Contig1:808281..820919- (Pylaiella littoralis U1_48) CAGCTCCAGTCTCAGCGCAGGTTCCGTCGAGTGCTGCTGCTACTCGCTTT
CCCGTTCTCCCACACACGTGGGCACTACATCATGTGAGCAAGCTCGAACG
ACAGCGCACCAACTGCTGCAGGCGTGTAACCCCTGTACATGTAGAGCCAG
CTTGTTGACCAAGCCAAAATATAGTCCACACTTCTGACCAACCTTCAAAT
TTAGTTTAGAAACAAAGGAATGAGTACTTACAGGGCAGTGCAAAGCAGAG
CACACACACCGGCACACATATATACTTCGAAGTATGCTCTAGGTCGTCTG
CGCTGCCCCTGTGAATATTGCACAAAAAACGGCTGCCCATGCAGCATGGA
AAAGCGTTCATTAAGTTTGATAGCCGTGGTGGGATCGGGGTACCACTGCC
AAATACTCTGCTGAATACTGCTGCTGTTTAAAGCGTGGAGTACGTCACAA
AAAAAATTATCATTCTGATATACTGCTGTACTGGAGGCGAATTCAAAATT
GAAAAATCCTACTTTGTCGTCGTTGTATCATGTGATACTTTCCTGGTATC
AGGGTATCCCCTATTTGCAGTTTAACACTGTTATTTGCAGTTTAACGACA
ACACTCTTCATGATCTATGCCGCTCCTGACCAACCTATCCCTATCCCTAA
CCCTCTGGTTATTTAACCCTCTGCTTATTTGCAGTTTAACGACAACACTC
TTCATTATCTATGCCGTTCCCGACCAACCTAGCCCTATCCCTAACCCTAA
CCCTAACCCAAACGCCCGACCTCTGCCCGACCTCTGGGGTGATCGGGTCC
CAAAGGGGCCTCTGCGCGGCTTCGCCGCGCGTTCGGTTGGCGTTCTTGAC
AAAAAGCAGCCGTTGGCCTTTGGCCAATCAGACCGTGTTGTCAAGTTAAA
CTGCACGGTGCTATTTGCAGTGTTAAACTGCAAATAGAGGCTACCCTGGT
CTCAGATATCGTATCATACGTACGACGTACCGGTATCATCATTCGTACAT
ACGGCCTCATGTGTACTACTTAATTCTAACTCACGCAAAAAAACGGGTTT
GCTCACGCACGAAGCCGGGTCAGCAGATTATTGTCCTACGAAAGAATCGA
GTGTAGTGAACGCAGATAGGAGGAGTAGTACTGGAATCACATGAAGTTAT
TTGCATACCCTGCCCGCCGTCGGCTCTACCGTGTATTTGCATACTGGTAC
AGTGCATAGAGCGGGTTTGATCCACACTTGAAGACTGCCGACCAAGAAGG
TGCACGTTTCCATCATCTTCTGTTCCACGGCTCTGCGGACTACTGCTGTA
AACTACAGGCTGTGTCCTGTGTCCTGTGTTTGTGTGTGATTCGTTCTGGA
AGCCAGTCTTCAAACCGAGGTTAGACAGAAGCAAGGTCAGCACAGATTTT
TTCCTGACATGATACACGAATATTTATTTGATCATGATATTTACATTAGG
CCCTGTGTTAACGACAATCAGGATATCAAAATTGAAAAATCAAAAAAGCA
AAAATCAAAGTTTGATTTTACGAAAAACACTGCGAGCCATATTAACGAAC
CAACCTGGTAGAGGCCTGTAAACGCCGCCCAGATCCAAAACCTCTGATTG
ATGATGATGTCACCATCGATCGGCACTACTGCAGTACAGATACATGTATC
AGAGCAGCACTGCAACACGCTGATGTTACGTCGCTGAGAGACACCACGTT
TGTTTGTGTGTCTGTCGGCTTGTTTGTGTGTGTTGGCTCATCATGGACTC
GAGACTGCTGTACGCGTCTGTCTGTCCGCTGTTGTTATTTGGCTGTCGTT
GTCCTGCTTTAGGTGTTGTCTGGTGCCTCATCATGCGAGTCTGTCTGTCT
TTGTTCTGCTGCTCTAGGTGTGGTGCTGGTTTTGACATGCCTGGTGCGGC
GGCACACCTCTCTCTCTCTGTGTTCTGTGGATTGCGTCGGCGTGCCCTGT
GCCTCTGTTTGCTTGTCTGTGGTGTGGTGCGCGAGCCACATCGTTCAGAA
AGCCTTCGATCGGGTTAAGACCCCCAATTTTGATTTTGATTTTCTGGCAA
TTACGTCTTTTTGGACTTCTTTGGTCTGCCGGTGATGTCCAAGAAATCAA
AATTGTCGTCGGGAGGCCTCGACCAATCAGAGACCAATTTTAATTTTGAT
TATTCCCAATTTGGATTTCCTGAACAGCGTTAATACAGGGCCTCACAGCA
GCATTGCATAGTCCGTTTACACTACTGCTGTACTTGCAAAGTATGTTACA
CTCCGGAGAATACTTCGTACAGAGTTTGGAGTACAGAGTGTGCAGCCCCG
ACCATCACCGTATGAACAAAGACAAAATCCTGGCTGACTCAGGCTGTATT
TGAAACTCTGCTGTTCATAAAGTTGCTCTTCTCGTAAATTAGAGATAGGG
GTACGTACGCGGAAAAGCCCGCTTTCGAGAAGCCATTGTTTTTTTGTCGA
AAACATCAATTTACTTTCATGTTCAAGTCAAAACTGCTTCTTTGGACAAG
TATCTCGTTAGGCCTGTCTTGTCCCGACCGCAGTGGTACTGACATCAGAC
CTGCTGCTCGTGCGGAGACATCGAAGGCCACAGCAGGGTCGAAAAGTCCG
CAAACTGGACCGAAAAGCTGGCACATGGTTTCCTGCACTGACACGTACAC
TTAAGGCGGGGACTCCCTTGCACAACAGACCTTATTCGAGTGTTGTCCAA
AGAACCTGTTCTGACTTGATTTTACGAGTAGAGAAGTGGAAAAGCTATCT
CGATTTGGGAGAAGGGAAAAAATACGTGGGGGTAGACATACGAACGTCAC
GGTGAAGAAAACGACGCACCTACCGCCGCTCTGCGTGAGACCAAACGGAC
CTAACGCTTCCCTGTTGGTGTTATCGATTTTCTGTGTGATACCGTGATCA
TGCGAAGGTTGGCACCCATCGGAAGGTTGGCACCCATCGGAGAGATAGCA
CCGGGGTGCGATAAAAAACACAACGTAGAAACAGTTAATCGTGTTTTCGC
ACCCCCATCGGAGCGATCGCACCCGGGTGCGATCTCTCCGACATAAATAG
AAATTTGAGGGCCACCGCAGCGGGTCTGTGGTAGGTAATATTCTCATTCT
TTCATACTCCGATGATGTAGTCCTCCAGGGCTTGGTCAACATCGGCGGTC
GAAGCTGCAACCCCAACGTTTAGCGACTTGGCACGCGAGCGCTTGGGCGC
GGAGGCGACCGCGACCTTGAGCTTTTCATCCTGCCGCACCCACTCGATCA
CGCGCTTTTTAGCTACACCGAGAACTCTCGCCGCTCCGCCGTTTCCCACC
GGGTTGCCGTCCGCGCAGCGGACCCTCGTGAATGCCGCCGCCTTCAGTTT
GAAGCCGTTGGTGTAGCTCTCTCTCCCTCCTGCCGAACCAGACCTTTCGA
CTGCGAAGCCAGGCTCCGGGTACTTGCGTTTTTTGCAGGCTTGTCGGTGG
CCATCATTTGCTGCCAGCATCTCGTCGTTGGCCTCTCCTGCTGCCAAAGG
GTCGGCAGCCGCAGCAGGAGCAGCAGTAGCACTCTCATTGGCCTCTGAAA
AAGCAGTCTCGCTGCGTGCACCCTCTGACATGATGCTGCAGGGGGTGGTC
TGGATGCCGTGGGTTTGTGTGGACGCTGCGCATCTCAGCGGAATGCCGCC
GCGTTTTTCGGGGTATTGTGCCGTACTATACCGTTTTTTACCGGATCGAT
TCTCAATTCGCCGGCACACCGTGTTGGGTGATGTAAGGTGTGTGTTAACT
GCTGTGTTTACTGTGCCCTACATCTGCAACAGGGTGGGTAAGGTATCCAG
CTGTTGTGGTACTCGGTATCGCACCCATCGGAGAGATCGCACCGAGGGTG
CGCCAAAATTGAAGAACGGCATGATTTGATTGTATTTCCGCACCCCCATC
GGAAGGTTGGCACCCATCGGAGAGATAGCACCGGGGTGCGATAAAAAACA
CAACGTAGAAACATTTGAAAATCGATCGCACCCCGGTGCCAACCTTCGCA
TGATTACGGTAACTGGGTGCTCTATTGAGGCCTGGGGCTACGAGCTCCAA
AAAATCGAAATGTACTCTAGGGGAGATTTTTCGCGGACCCTCCAGTGGTG
TCTCAATTCCCCACAAACTTTTTTTGAGGCTGATCCTCGTGAGCGCGATG
TCATATTTACGAACTACTTCCCAACATACCCACCGATGACCCGGCGCATT
TACTGTACGAGGTAAGCCGTAAAGTTCACTAGGCAGGGGCTGAAAACCGG
TAGTTGTCCACCGCTGCTGTAGTGGAGAACACGTCGAACCCTCTCTCCTT
CTGAAGAAAACAAAAATCCTGTGCTGACAGTCCTCCTTGTGTTTCCACCC
ACCCCGACTGGTTCGCCCAACCTACATACTGAAAGGTGAAGACAGGCGTC
CGGGACAGATGGTATGACAACGATAACACACACACAGTCTTGTACCGGCA
CCAAGCAACACATGCAGACAGCAGGTCATGGTGTACTCTGTTGTTTTGGG
GTCCAGGTGCGGGTGCTACTACTCCTGCCGCTGTGAGCACGCACAGACAG
TGCTGTCATGGCGCGAGAGACACAGATGAACGTTGACCGACCCCCCTGTT
GATTCGTCGTATTTTTCGTTGGTTGCCTTCTTGGCACCCCGAACATTGGC
ATTTTCTTGTGTGCCGCGAATTGTCGTCTCTGCACGGCCTCGCTGCTATG
ATCCCATCAACAGCGCCAACCACGGGCGGCGAGAGAAAAGGCTGCGACTT
GGACAAAATGTTTACAGGAGTGACCTCTCGTGATGCAGCCACGAGCGGCT
GTTTGTGGGACGGGGAGAGACCGAAAACGATGCTGTAGTCGAATGGATGC
CTGCGCGGTGGTGGTGTTGGTTCATTTGCTTGCGCGCCATTCGCATGAGA
AAGGCGCAGCTTCTTCGGCCTTGTGTGAACCCTTCCTTTTTACTTTCTGT
GCTTTTAGTCGGACCTTCCTGTAGGGCTCAGCACTTTTGTGACCACGGGC
TAGGTCTCGGCGATGAGCTCATGTGAGAACCGTCACCACCTCTCCAACAC
CACCACCGCCACCAACAACAACGACAACAACAACAACAAGAACAAGAGTA
ACAACAACACCTGTCACGAGTGTCCCCCTATGTGGTTTTCCGATCATCAA
AAGTACACCCAAGGGACCAACCCGGTACTACTACGCTCGGTATAGATGCG
ATAATAAATGAATCCAGTTATCATATCCGTCAAACAACCAACCCTTCTCC
CTTACCGCAAGGGCGACGTATATCGTCCTGTTCTAGCTAACACATGCATG
CTCACAGTCAGTCGCGCGAAAGGGGGGGCACATTCTGGAGCTGTTCGGTC
GAGTAAATACTAGACTTCAGTGTGGATTGGTGAAAAAGGGGGGGGACCCC
CCCTTTCGCGGGACCCCTCTTATCGAACCGAAATCCAAGCTCGCCATTGC
ATCTTACAGTGTACTTCACTGTTGCATTGCGTCACGCGACGTCACGCTAC
GTTACTCCTACATCACATCATGAACCGGCACATTTAATTGCACTGCCGTA
GGGGCGACGAAGAGGAAGAAGACTACGACTTCGACTACTCGGATGAGGAG
GAGGAGGAGACCGATGTCGGGCTAGAGAACAGCTACTACTCCGCCAAGGC
CCTCAAGGCGGAAGACCCCAAGGCCGCCGTGGAAGCTTTCCGAGAGGCAA
GAACAGCAAGAACAAGCGCTCCCTCATGTATTGGAGGAAAAGAGGCGGGA
GGGGGGTTAGAGCGCACCCATTGGTTGCTCGCAGTATACCCGTTTGATCA
TTGACTATGCATACATGGATTCCTTTCGAGACGGAACACCAAGGTAGGGG
AGGGAGAGGGGGCGTGGCCCTTTGCAACGCCAGCCTTGCCTTTGTGTCGC
TTCGCTTCACTTTTCGAACAAATGCATAGTTCTGCGGCGGTTTTCTGGCA
TGACGGCTTTGTTCGCGCCTTTGAGCTCTCTTATATGTACTACTCACAGG
AGTCATGCGGTGCGGTCGTTTTTTTTATTTGCCACACAGACAGAGTTTTG
TTGTTTCTCTCCGTCATTTTGTCACAGAGTCTTCGCCACATCTGCTGTCA
ATGTTGTCACAGATCATGGCGAATGAGGAGGGGCAGGGGATCTGGGGATT
CAAGGCCCTGAAGCAGCTGATGAAGCTTCTCTTTTCGATGTCCGCCTTCA
AGGAATTCACGGAGTGCTATACGCAGCTGCTTGGTAAGGGGGGGGGGGCG
TTCACTTTATGTCGCCGTTCCGCGTCTTACTTCGTCTTTGGGTATGCGCT
GTTTGTTTCGTTGTGTGCGTGGCGGCAAAAGTTGGACGGGGAGTTCAGCA
GTGGCATTCCATAGAACAAGAATACGCGAAATGGTAAGGAGCACAGCAAG
TAGAGTACTGCGGAGCATCGTGTATCGTAAAGTAGGTTATTTTCAACAGG
GAAAGGGTACACAGAGGGAGCTGCGTAGCCGAACTTTGCAGTCGCTAGTG
TACCCTTTTTGGACGAAGGGTACACAACGGTCGTTTCTGTCGCTGCTTTT
CACGAATTACTTCGTATTTGACTCAACCTTATTTCACTCAATTTTTCGTT
TCCTTCGACAAAAGGGTACACAAGAGGAGCCGTGAGTCAAAACGTGGGGG
AAAAGGGCGTGAATAGCGTCCTGGACTACGTGTCGTCGTCAAACGATTGG
AACCTTCTCAAAGGATTCTACGAGCAGACGCTGGACACGCTCAGGCAAGC
CGATTAAAATTCGCGCATGATGTTCCATTCCTGTCGCTTCAACTTTTTTA
CTCTTCATTATTTGTGGGGTAATTATTTTTTGCTCATGTAATTCGTTCAT
GCACGATTTACGAAGTATTTGTTTTGTATGATGGGCTACCTATGTGGTTC
TTTGTTCGCATCGCTTTTTTGTCACTCGTCACAATGATTTTCGATTTTCG
GCAGATCTTTTTTCTTTGGCCCTTGAATTTTTTTTTTTTGTGTCCCTCGG
TTTCTTGCCCGGGTCGGTCGTTCGTTAGTATCCACCTTGTCACCTTCTTC
GTTTTCAAGCTCTACAATGTATGACATACAATATGTGTAACGGCGGTTTA
TTTTCAGTACGTTCCCGAACATTCTTGGAGAAGCATTACGCGAGAAATAA
TTTTCGCCCTCGCAGAAGTAGACTAATTTCGGGGTCACTTTTTAGTGAAG
GGGTAGAAGACAAGACAAGACAAGACAAGACAAAGCCCAATGAAGAGATG
ACGCGAAACAAGGTCACCAACAATAGACATTGAAAAAGAGCTAATGAAGT
ACTAAATAAATACAACCTACAACCAACCCCGCGTTTTGTTTTATGATGGC
GCCGTTTTAAGCTTCTTTTTTTTTTCTGGTTTGCGCCGTCAGCGATGATA
GGCCAACGGCACTGCTGTGCTCTCGTCTTGCCTTAGCTTGCTTTGCTGCC
GCCGAAGCTGCCGCCGGTGCCGCCGCCGCCGCTGCCGCTACTACCCGTCT
GCTCCGCGTCTCGTGTGCGCAGGGAGCACAAGAACAACAGACTGTGGTTC
AAGTGCAACTTGAAACTTGGTCATTTGATGTACGAAGTGGGAGAAATGGG
CAGGCTCCAGAGAATAATCAAGGAGCTCCTGAGGTGATCGTTTTTTTTTG
CTCTTCCCCTTCTAACCCGTCCTCGATGCTGAATCGCTCTGACTTTTCTC
ACTGCTCCGAGCAACGTCAAATTTGCTGCTTGTGTATGTGCCTCTTCGGT
TTTCGGTCGAAAAGAAAATGCCTAGCCTACACAAATATAAAGTCAATGGA
GTAACTGATCGTCTAGAGGATTACCGTGGGTCTCAAGCGTAAATAGCTAG
GGGGCGGGGGGGGAGGGGGGCATATTTGTTGTCTTTTTCATAGCACGCAC
CGCAAAACATGTTTGAACACGCAAACCCACTGGTAGGGGACCGCCTTTTT
TTTTATTCATGCTTCGAAGTACATGCAGCAGTGTAGCGGTGCGTGCGCAA
AGTACTCCTCGTTTGGAAAGTGCTGGTTTGGTAGAAAGAGGCACGCCTTG
TTTGCCCCGCAGCTACGGGGTCGGCCCGCTTGGTCTGCTCTACCTGTCGC
GCTGATTCTCGCGACCCATCCCCCCCACCCTCGTGGGTGCTTGTTTGCTT
CGCCAGCAACCCACTTTGTGAGATGAAAAATCAATCTTGTCGAGTATGTA
TCGGTAGAGTTTCGAACCTCATCGTCGTCCTTGTCGCCATCGCTGTCCTC
CTCCTTCTTCTCCTTGTCCTCCTTCTCCTCCTCTTGCCGGTGTTGTTGTT
GTTGTTTTGCTGGTTTTGGCGATTTGTTGATGATGTTGACATTTGGGTCG
GTGTTGATTGTGTTGGTGGTGTTGTCCTCGCCGTCGATGTTTTTCGCGTT
GTTGTTGGTGGTGGTGGTGGTGGTGGTGGTGGGCATGGTGATGGCACCAG
GGCGTGCAAGACCGAGGGGATCGGGGACGATGATGGGAGCAACGCCGTCA
AACGTGGGACACAACTGCTGGAGATTTTTGCTTTGCAGATCCTTATGCAC
TCCAGACAAAGAGACAAGAAAAAGCTAAGGTGTGCGTGTGCGTGTTTGTG
TGTGTGTGTTGAGATGCTGGTAATCGTTGTGGCGTCGATGCTTTTTTGCT
GTGTTCACTGGTGTTGCTGTTTGTTCGTGCTCGAAATCGTGTGACATGGG
TATCGACCCACTCTTTTTTTTGCGACCCTCTCATTGGCCCATTGCGGCGT
GTGCATCGACTGGACTCTTCATCCCCTATCCCCCCCCCCCTGCCCTTACA
TACAACGCTAAATGATGCGAAAGGAATGGTGCGTCTTAGCTTGCCCTCAA
CTCGTCTGCAAAACAATACGAAGTACGAAGTATATTACAACAGTCACAAG
AGTAGTGGAATCTCTGCCACCCGCACCCCTCTCCCCTCCACCCCCTATTT
TTTCGTATGCTTCTGTCACAGCCCAAGCGACTGCTTCAACGAAAACCGCC
ATCCTCTCCCATCCCCTATCCCCACCCCCCGCGTTTCCTTCGTCTGGTTT
CCGTTATTGGCTTGTCCGACAAGCACGCACGCCTCAGAGTTGTTTGTCAG
CATGCTCCGCCTCATCCTCGGGCAACGACAGCGCCAACTTACCTCGAACC
CCCCCCCCGACTTATCTCTCCGCGCCCCGCCTCGCTCTTCATTGGTTGGG
CCAGGGAAGTTTACGAGCGAGCGCAGAGGGTAACCTCCGCGGTACCGCAT
CCGAGAACTCTGGCGACGATCCTCGAGTGCGGCGGGAAGATGCATATGCA
GGTAGATTTTGGCAAATAGGACTACCGTTAACCGTAGGTCGCGTGAGATA
CCATTGATTTCCAAAGGTCCCATCACTATGATACCGTCAACAGGATTGCC
CTGCGTACGGTACTCCAAGATCGCACAAGATACAACACGAACATACACAC
AAGCACGCACACGCACAAACGTGGGCCGATTTACAGAGCTCGACTATGTC
CGAGTAGAAAGATATCCGTGCTCGTAGATCACACACATGCACAAAACAAA
ACACACGCAAACGCACACAACTGGGCTGATTTTCTATTCTCGACTGCGGT
ACCCCCCACAACAAAGAGCGCGCCTGCCATGCCTGCCAATACCAAACACG
ATGACTGTCATAAAGCCTCAACGAGATGGATACGTTCCAAATGCCGGCCG
GGCGGCCCTTTCGATCGATGCAGCACCGACACTCTTTTCTCTCTACCGCA
GTCGAGCGTTGGAATCGGTCCCAGAGTGTGGTAACTTACATGACTTCTCA
TACGGGGTGAGGTCCCTGCTGTAAGGTACGGAGTCCTTGCGTTGGGGTCG
GTGAGGGAACTTCAACTCTCGCTCCTCCTCGTTCTTGGCATCGTACTGCT
TGTCACAGAGTGCACGTTTCATTCCATACATACAGTAGCACGTATTGATT
CGTTCCTTAATTCCTTTTGCACTCCAAGGGGGCGCTTTACGCTTGCTGAA
GATGTTGACGTGTGTTGACACGCAATTCCGGCCTCCCACCGCATTTCCAC
CACCACCTTGAACCTGCAAGTTGTCGTTTACCCCTCGGAGAATTCGAGAC
TGCCGCTTTACCCACCGCACGCCCCGCCTTATTCGATTTCATCACCCCCC
CTTCCTCCTCCCTGTATGTATCTCCTCGGCATGTCTCGATCCAAACTGGA
ATTGCTGGACGCTCAAACTCTACGCCTACGCGCGCACAACATGATGATGG
CATTGGCGTTGTTGGATCGGCGCTTGCTTGATGTTGGACGGGAGCAGGAG
AGGGAGTGGGACCACGCGTGCACGGCTTTTTTCCAGAGCTTCAAGAACTA
CGACGAGGCGGGCGATCCCGAGAGGCTGCAGGTGTGTGTCTGTGTATGTC
TTGAGAGATACCCCGGCGTACGTAGGCTCTTGCTCCATCGAATCTGAGAG
AAAAATCGTCGGAGAACCCCGACGGAGACCTATCTTTCTCTTACAGGTCA
TCTGAGTGCGCGGCATTGTCCACGGGTATTCTGTGACAGCATTGCAATGG
CTGGATCATGCACACTCTTACTTCTAGCGCAGACCGCGCTTTTCCACCGT
TTTGGCAATAAAGAGGGTGTGCGTGCGTATGCATGTGTGCGTGTATGTAT
GATTTGATTTTTGTGTGGGAATTTGGTCCGTTTGGTAGGTTTCTTTTTGT
GATTGTCCCTGGTTGATTTAGTTTGATTTTATTTGATTCGATCGCGGCCC
GTAACCCGCCCCCCCCAAAACAGGAAACGGAAAACGATTTCACGCATATA
TATACTGTATGATTACCTCTGACCCCCCCCCCCCGCGCACGCGCGCCCTG
AACAAAAAAAAGGTGCTCAAGTACCTTGTGATGGCGTCTATCCTGCACGA
GTCGAAGATAGACCCATTTGACAGCCAGGAGGCCAAGCCGTACAAAGAGG
ACCCCGAGATCGTGGCCATGACCAACCTCGTGACTGCCTTTAGAAATAAA
CAGATCAAGGTCAGCACGGACTGCTGAGTTTAACCGTCGTTGATCATGCG
TTGCTCCTGGTGGCGCTTGTTGTCCTGTTCTTTCTGTCCGAAGAACGCCT
CTGTAGGAGTTCCGTCGACGGTCTCGCGTATTCCTGGCCGCTTTATCTGT
TGTTTGTTTCCAAATGAAACCTCTTGTAATATGATTTCTATTGGCGGCTA
TGCGTTTCTGTCAGGTGGTGTCACTTTTCTAGTTTGGTCCGAATCAAACC
TCTCAGGATTGGAATTTGATTGACGGGTTGGTGCGTTTTATCCTGGTGAG
GCTGTTTTATTCTTCTTGCTCTTATCGCCCGAAATAGTCTTCTCACAATC
GGTTTTCCGTTGGAAACTACGCGTTTTTTGCCTGATGGTGGTTTTTATGC
CTGTCCGAACAATACACAACAGGACTTCGAGCGAATTTTGAAGACGCACC
ACGCCTCCTTGATGGGAGACCCGTTCATCAAGCTCTACATGGACGACATT
CTGAGGACGATGCGCACACAGGTCTGTCGCTGACTTGTTATTTTTTCCCC
CACTAACCCATGCTGTTCTTGACTTTTTGAGAGAAAAAAAAAAACTCAAA
CACGAAACGACTGCTTGTGCTTTTTTGAGAGACAGAGACGGCCATGTAGT
ATGAACGTAAGCGACTAATATTTCATTGGAGCAAATCACTCACGATCAGA
GGCTGCTGAAGCAATATTTTTGTAAAGGGGCCATGCGATATCCGATTTTT
ATGTGCACCCCTTGAATGACTGGTGAATCATTCGAGAAAATGCCATGTTA
AGTGTCACCGCCGCCACCACCACCACAATAATAACAGTAGTAAACGTTCC
CCCCCCCGGGGTACAGGTGTTGCTCAAGGCAATCGCGCCTTACACGCGAG
TGAGGCTACCCTACCTCGCGTCGGAGCTGAACGGCATTCCCGTGTCCGAC
GTGGAAGATCTGCTGGTGTCGCTCATTTTGGACGGGAAAGTGGACGGCAA
GATAGACCAGGTGCGGTGCGGTGTGATAGTGTTGCCGATTGGTGCCGAGT
TTGGCAAGCGGTGGTGAACATTTAATATGGTTTGTGTGGATGGTTGGTCT
GTTGGTGGTGGTGGTGTTGATGTTGGTGGTAGTAGTGCTGGTATTGGTTG
TGTGAAAGGTTTCTTATTGGTGGCGTTAGTGGTGGTGTTGATGTCGTTGC
TATCTGTTGTTGGTGCTGCTGCCCTTGTTTTTGGCGTTGTTGATGTTGTT
ATCGTCGTCGTTGTCTTGGGTACATCATTTTTGGGTTTGCATCGCTCCGA
TGATTTACTCAAACGTTTCCCCCCGTTTTCTTGTCCTTCCTGCTCCCCCT
TTCCCTCCCCCCTCCCCCCGCTCGCTTTTTTTGTTTGTTTCTCCCCAATA
TTGTCCAGGTGAACGAGGTCGTTCTGTGCGGCAAAACGTTCATACCTAGA
GGAGCAGGAGGGGGAACGGACGCCCCCGTTGCCTTAGGGTCCGGCTCTGC
GTCAGGACCGGGGGCGCCGACGAGGACGGCCTTAGCGTTGGAGCGGTGGG
CGGAGGCCCTCTGCACGCTCAGTGCTAACGTCGTCGCGAAAGTCAACTGC
CGATGACGTGAAATTTCGCCTCGTGTATGTAGTGTTGGG back to topCoding sequence (CDS) from alignment at P-littoralis_Contig1:808281..820919- >mRNA_P-littoralis_Contig1.136.4 ID=mRNA_P-littoralis_Contig1.136.4|Name=mRNA_P-littoralis_Contig1.136.4|organism=Pylaiella littoralis U1_48|type=CDS|length=1410bp|location=Sequence derived from alignment at P-littoralis_Contig1:808281..820919- (Pylaiella littoralis U1_48) ATGGGCGACGAAGAGGAAGAAGACTACGACTTCGACTACTCGGATGAGGA GGAGGAGGAGACCGATGTCGGGCTAGAGAACAGCTACTACTCCGCCAAGG CCCTCAAGGCGGAAGACCCCAAGGCCGCCGTGGAAGCTTTCCGAGAGATC ATGGCGAATGAGGAGGGGCAGGGGATCTGGGGATTCAAGGCCCTGAAGCA GCTGATGAAGCTTCTCTTTTCGATGTCCGCCTTCAAGGAATTCACGGAGT GCTATACGCAGCTGCTTGGGTACACAAGAGGAGCCGTGAGTCAAAACGTG GGGGAAAAGGGCGTGAATAGCGTCCTGGACTACGTGTCGTCGTCAAACGA TTGGAACCTTCTCAAAGGATTCTACGAGCAGACGCTGGACACGCTCAGGG AGCACAAGAACAACAGACTGTGGTTCAAGTGCAACTTGAAACTTGGTCAT TTGATGTACGAAGTGGGAGAAATGGGCAGGCTCCAGAGAATAATCAAGGA GCTCCTGAGGGCGTGCAAGACCGAGGGGATCGGGGACGATGATGGGAGCA ACGCCGTCAAACGTGGGACACAACTGCTGGAGATTTTTGCTTTGCAGATC CTTATGCACTCCAGACAAAGAGACAAGAAAAAGCTAAGGGAAGTTTACGA GCGAGCGCAGAGGGTAACCTCCGCGGTACCGCATCCGAGAACTCTGGCGA CGATCCTCGAGTGCGGCGGGAAGATGCATATGCAGCAGGAGAGGGAGTGG GACCACGCGTGCACGGCTTTTTTCCAGAGCTTCAAGAACTACGACGAGGC GGGCGATCCCGAGAGGCTGCAGGTGCTCAAGTACCTTGTGATGGCGTCTA TCCTGCACGAGTCGAAGATAGACCCATTTGACAGCCAGGAGGCCAAGCCG TACAAAGAGGACCCCGAGATCGTGGCCATGACCAACCTCGTGACTGCCTT TAGAAATAAACAGATCAAGGACTTCGAGCGAATTTTGAAGACGCACCACG CCTCCTTGATGGGAGACCCGTTCATCAAGCTCTACATGGACGACATTCTG AGGACGATGCGCACACAGGTGTTGCTCAAGGCAATCGCGCCTTACACGCG AGTGAGGCTACCCTACCTCGCGTCGGAGCTGAACGGCATTCCCGTGTCCG ACGTGGAAGATCTGCTGGTGTCGCTCATTTTGGACGGGAAAGTGGACGGC AAGATAGACCAGGTGAACGAGGTCGTTCTGTGCGGCAAAACGTTCATACC TAGAGGAGCAGGAGGGGGAACGGACGCCCCCGTTGCCTTAGGGTCCGGCT CTGCGTCAGGACCGGGGGCGCCGACGAGGACGGCCTTAGCGTTGGAGCGG TGGGCGGAGGCCCTCTGCACGCTCAGTGCTAACGTCGTCGCGAAAGTCAA CTGCCGATGA back to top
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