mRNA_P-littoralis_Contig191.73.11 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig191.73.11 vs. uniprot
Match: A0A6H5KP90_9PHAE (TRUD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KP90_9PHAE) HSP 1 Score: 1063 bits (2748), Expect = 0.000e+0 Identity = 714/1120 (63.75%), Postives = 793/1120 (70.80%), Query Frame = 1
Query: 208 MGTRATESTVGITHFMTESDTGFSGVLKQRYSDFVVHEVDPDGNVCKGTDFPGLLRPIEHDRQ----------SASSH------SSVEPQPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE------LKTLIKSGAQSLIPVVGEEVTAKVEAFVLEGISIRGRDQRTLTLPTTDKTIRTKVYGLLKQNLSKYLLAVTVDDPASIPIPXXXXXXXXXXXXXXKIDTAVTK-ASDGDGTPPEGA------AAAEATESTVGNGXXXXXXXXXXXXDDAKKHPSEGKPVEKQNGDAAPGQAAEAAAVKKPDPNGPKCVQLKMKPDWRRAGGGRKXXXGDLDHXXXXXXXXXXGR-WAWPEGRPEFCRFILYKENNDTMGAVSRMCKHLRFSSKVVGYAGTKDKRGVTSQWCTVKRKSIEELRTFNRPLGAFQGSIVLLGNFSYVEEPLKLGNLSGNRFGIVLRNLTLPGASGSNSNSTGNGRXAAAPRTENGAGSGAVNPEGGVSTAGEEVTKNGSDDAADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVEAGAKLEETVERRCTWVKERGFINYFGLQRFGSGGAPTSEVGLAMLKEDWAGAVRLIMTPRLGENEATHESKVHFLKHPTDIKGTLSKLPFFMDAEKSMMQALLRGGPNAHVDALKAVPKNLQLMYLHAFQSLVWNLAASERIKLYGREGVVEGDLVFPKDSAAVLDDNDEPVVELA-NAASEASADVEGEDADAGGEGE-PQGKRAKTGGAPLPPVHAVTKEDVEQGTFQMTDVVLPMPGSGVTYPSNGVGECYTKALEERGLTEACFNTSTQKSFNLGGAYRRLLQVPKDMQWEMKRYDDHTLHLINTDIDDLLDIDDARIAKENAEKKXXXXXXXXXXXXXXXXXXXXXXXAPA-------ETNKTDLGQQEQPPSVKEGEAGDGKPAS-DAMDVVDATAEVK----PSAESKGRFHALCLHFTLPSAAYATMCLREITQQDTSTSFHTSLNTLAPGQHPAKGAASVEGGATAXXXXXXXXXXXXXXXDKGDANASTPKGAVIKIGSSFK 3435
MG RA ESTVGITHF+TE+DTGFSGVLKQRYSDF+VHEV DG VCKGTDFPGLLRPIEH+RQ +A++H S+ P A XXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXX LK KSGA++L+PVVGE+V AKVEAF+LEG+ + G+D+RTLTLPT DK R KVYGLLKQNLSKYLLAVTVDDPAS P P K +T K A DGD GA A EA + GNG +P EK + A AA KKPDPNGPKCVQLKMKPDWR GG K GDLD XXXXXXXX R W WPEGRPEFCRF+LYKEN+DTMGAVSR+CKHLRFSSKVVGYAGTKDKRGVT+QWCTVKRKSIEELR+FNRPLGAFQGSIVLLGNFSYV EPLKLG+LSGNRFGIVLRNL+LP ENGA GG + +E +K ++ A AVVE GAKL+ETV+RRC WVKERGFINYFGLQRFGSGGAPTSEVGLAMLKEDWAGAVRLIMTPR+GENEATH SKVH+LK+PTDI+GTL+KLPFFMDAEKSMMQALL+GGPNAH+DALKAVPKNLQLMYLHAFQSL+WNLAASERIKLYGR+ VEGDLVFP+DS A ++D +V+ A AA+ +A+ +G+ D GGEG+ P+ KRAKT LPPVH VTKEDVE+GTF++TDVVLPMPGSGVTYP+NGV ECYTKALEERG+TEACF++STQK+F LGGAYRRLLQVPKDMQWE+KRYDDHTLHLINTDIDDLLDIDDARIAKE+AE+KXXXXXXXXXXXX XXXXXX + + ++QPPS K+ E GD K + DAMDV A E K P GRFH LCLHFTLPS++YATMCLRE+TQQDTST +HTSLN+LA GQHPAK +S XXXXXXXXXXXXXXX AS PKGAVIKIGSSFK
Sbjct: 1 MGERAKESTVGITHFITENDTGFSGVLKQRYSDFIVHEVTRDGEVCKGTDFPGLLRPIEHERQPPPPAHGQPTAAAAHKETPSDSTASPTAARGSDAVEDGSKDKDGEGKGDGEGSPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDGSSGGGMXXXXXXXXXXXXXXXXXXXXXXXXXLKKQAKSGAEALLPVVGEQVAAKVEAFMLEGLGVTGKDKRTLTLPTADKNTRAKVYGLLKQNLSKYLLAVTVDDPASAPPPMAS-----------KTETFEAKDAEDGDAKATAGASDDKSGAGGEAPAAKEGNGTENPSSEKGGENGXXXXXXXXXEPAEKTAANTK-ASAGTPAAAKKPDPNGPKCVQLKMKPDWRNIDGGNKRRRGDLDRSGXXXXXXXXXRRWVWPEGRPEFCRFVLYKENSDTMGAVSRICKHLRFSSKVVGYAGTKDKRGVTAQWCTVKRKSIEELRSFNRPLGAFQGSIVLLGNFSYVAEPLKLGDLSGNRFGIVLRNLSLPSGG------------------ENGA---XXXXXGGQDASADEASKKEAEYAE-------------------------------AAVVETGAKLKETVDRRCAWVKERGFINYFGLQRFGSGGAPTSEVGLAMLKEDWAGAVRLIMTPRMGENEATHASKVHYLKNPTDIQGTLNKLPFFMDAEKSMMQALLKGGPNAHIDALKAVPKNLQLMYLHAFQSLLWNLAASERIKLYGRDAAVEGDLVFPRDSPAAAIEDDATLVDPAIGAAAVDAAERDGDGEDEGGEGQQPEAKRAKTAETSLPPVHVVTKEDVEEGTFRLTDVVLPMPGSGVTYPTNGVKECYTKALEERGVTEACFSSSTQKAFKLGGAYRRLLQVPKDMQWELKRYDDHTLHLINTDIDDLLDIDDARIAKEDAERKXXXXXXXXXXXXADPSSXXXXXXXXXXXXXXXXDPAAAEADVEKQPPSTKK-EEGDSKATTPDAMDVDGAAPESKCEASPPGSRGGRFHGLCLHFTLPSSSYATMCLREVTQQDTSTIYHTSLNSLAAGQHPAKKGSSAXXXXXXXXXXXXXXXXXXXXXXXXXEKASPPKGAVIKIGSSFK 1055
BLAST of mRNA_P-littoralis_Contig191.73.11 vs. uniprot
Match: A0A059D3U1_EUCGR (TRUD domain-containing protein n=5 Tax=Myrtoideae TaxID=1699513 RepID=A0A059D3U1_EUCGR) HSP 1 Score: 259 bits (663), Expect = 1.890e-70 Identity = 200/654 (30.58%), Postives = 297/654 (45.41%), Query Frame = 1
Query: 1333 GRWAWPEGRPEFCRFILYKENNDTMGAVSRMCKHLRFSSKVVGYAGTKDKRGVTSQWCTVKRKSIEELRTFNRPLGAFQGSIVLLGNFSYVEEPLKLGNLSGNRFGIVLRNLTLPGASGSNSNSTGNGRXAAAPRTENGAGSGAVNPEGGVSTAGEEVTKNGSDDAADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVEAGAKLEETVERRCTWVKERGFINYFGLQRFGSGGAPTSEVGLAMLKEDWAGAVRLIMTPRLGENEATHESKVHFLKHPTDIKGTLSKLPFFMDAEKSMMQALLRGGPNAHVDALKAVPKNLQLMYLHAFQSLVWNLAASERIKLYGREGVVEGDLVFPKDSAAVLDDNDEPVVELANAASEASADVEGEDADAGGEGEPQGKRAKTGGAPLP-----PVHAVTKEDVEQGTFQMTDVVLPMPGSGVTYPSNGVGECYTKALEERG--LTEACFNTSTQKSFNLGGAYRRLLQVPKDMQWEMKRYDDHTLHLINTDIDDLLDIDDARIAKENAEKKXXXXXXXXXXXXXXXXXXXXXXXAPAETNKTDLGQQEQPPSVKEGEAGDGKPASDAMD-VVDATAE--VKPSAESKGRFH-ALCLHFTLPSAAYATMCLREITQQDTSTSFHTSLN 3261
G +WPE +F RF LYKEN DT A+ + K L S+ G+AGTKDKR V++Q TV ++ +L + N L + +G+F YV++ L LG L GNRF + LR + A E+T++ + +RGFINYFGLQRFGSG PT +G A+L+ +W AV +I+ PR GE + ++ ++ K DI GTLS++P + AE++++Q+ + P ++ ALKA+P+ L++MY+H++QS +WN AAS R++ YG + VV GD+V ++ +DE V E+ SE D + D +T G LP PV +T ED+ G + D+VLPMPGS V YP+N V + Y ++ LTE+ N ++ G YRR+ Q P D +WEM RY D+++ L TD+D + R+ + N VK + +G +D +D V+ T E V S + H AL L FTLPS++YATM +RE+ + TS +FH +LN
Sbjct: 183 GSSSWPEHVGKFLRFHLYKENKDTQEALGVIGKMLGIQSRSFGFAGTKDKRAVSTQRVTVFKQYASKLASLNEKLIGIK-----VGDFCYVKDGLVLGQLLGNRFTVTLRGVI--------------------------------------------------------------------------------------------ADSEDTIKAAADALGKRGFINYFGLQRFGSGSVPTHNIGAALLRGEWKTAVSMILDPREGEKDVIAIAREYY-KESKDIDGTLSRMPRHLVAERAVLQSFKKF-PGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASARVQKYGSDQVVVGDMVHHQEH------DDENVAEVV---SECGNDDSSDAFD-------HVHLDETSGMDLPAEGHSPVKVLTSEDIASGRYSFDDIVLPMPGSRVIYPNNDVADIYHDLAKKDSISLTESVHNVKEFSITSMTGGYRRVFQKPMDYEWEMLRYSDYSVPLAETDLDKITKSKPLRLVEGNE-------------------------------------------CVKGKDFVNGNKENDPLDSVISLTRENSVNASISDRDEIHMALKLAFTLPSSSYATMAIRELLKTSTSVAFHKTLN 678
BLAST of mRNA_P-littoralis_Contig191.73.11 vs. uniprot
Match: A0A067DBE6_CITSI (TRUD domain-containing protein n=1 Tax=Citrus sinensis TaxID=2711 RepID=A0A067DBE6_CITSI) HSP 1 Score: 254 bits (650), Expect = 3.330e-70 Identity = 205/644 (31.83%), Postives = 292/644 (45.34%), Query Frame = 1
Query: 1345 WPEGRPEFCRFILYKENNDTMGAVSRMCKHLRFSSKVVGYAGTKDKRGVTSQWCTVKRKSIEELRTFNRPLGAFQGSIVLLGNFSYVEEPLKLGNLSGNRFGIVLRNLTLPGASGSNSNSTGNGRXAAAPRTENGAGSGAVNPEGGVSTAGEEVTKNGSDDAADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVEAGAKLEETVERRCTWVKERGFINYFGLQRFGSGGAPTSEVGLAMLKEDWAGAVRLIMTPRLGENEATHESKVHFLKHPTDIKGTLSKLPFFMDAEKSMMQALLRGGPNAHVDALKAVPKNLQLMYLHAFQSLVWNLAASERIKLYGREGVVEGDLVFPK--DSAAVLDD-NDEPVVELANAASEASADVEGEDADAGGEGEPQGKRAKTGGAPLPPVHAVTKEDVEQGTFQMTDVVLPMPGSGVTYPSNGVGECYTKALEERG--LTEACFNTSTQKSFNLGGAYRRLLQVPKDMQWEMKRYDDHTLHLINTDIDDLLDIDDARIAKENAEKKXXXXXXXXXXXXXXXXXXXXXXXAPAETNKTDLGQQEQPPSVKEGEAGDGKPASDAMDVVDATAEVKPSAESKGRFHALCLHFTLPSAAYATMCLREITQQDTSTSFHTSLN 3261
WPE +F RF LYKEN DT A+ + K L + G+AGTKDKR V++Q TV ++ +L N+ L + LG+F YV+E L LG L GNRF I LR + VV++ E+ ++ + GFINYFGLQRFGSG PT VG +L+ +W AV++I+ PR GE +++ ++ K DI GTL KLP + AE++++Q L + P ++ ALKA+P+ L++MY+H++QS +WN AAS R++ +G E VV GDLVF K D+ L N E E +N A ++S E + D P G+ V VT D+ G + + DVVLP+PGS V YP N V E Y E+ G LTE+ N ++ G YRR+ Q P D +WE+ Y D L TD+D + I KE E + +D +Q + S + + A+ A +V E A+S+G+ AL L TLPS+ YATM +RE+ + TS +FH +LN
Sbjct: 24 WPEQLGKFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQRVTVFKQRASKLAALNKRLIGIR-----LGDFCYVKEGLLLGQLLGNRFTITLRGV----------------------------------------------------------------------------------------VVDS----EDVIKASANSLGRNGFINYFGLQRFGSGSVPTHLVGATLLRGEWKSAVKMILDPREGERNEISKAREYY-KETDDIDGTLRKLPRHLVAERAILQCLKKC-PGNYLQALKAIPRTLRMMYVHSYQSFLWNHAASARVQKHGTEHVVVGDLVFCKGDDTEKELGCVNPEFEYESSNDADDSSHLDEVPETD-----HPDGRHNL--------VKTVTAADINSGKYTIDDVVLPLPGSRVIYPMNDVAEVYHHLAEKDGINLTESLHNVKEFSITSMTGNYRRVFQKPMDFEWELLTYIDGNKPLAETDLDKIAKAKLVNIVKEEEA-----------------------VCGNKEKDPSDCMKQSESLSKDIKLSTENNEAACAKEVKQPHVESVCGADSQGKQMALKLGLTLPSSCYATMAIRELLKTSTSVAFHKTLN 532
BLAST of mRNA_P-littoralis_Contig191.73.11 vs. uniprot
Match: UPI001CF9B84D (multisubstrate pseudouridine synthase 7 n=2 Tax=Anacardiaceae TaxID=4011 RepID=UPI001CF9B84D) HSP 1 Score: 259 bits (661), Expect = 7.700e-70 Identity = 202/646 (31.27%), Postives = 287/646 (44.43%), Query Frame = 1
Query: 1345 WPEGRPEFCRFILYKENNDTMGAVSRMCKHLRFSSKVVGYAGTKDKRGVTSQWCTVKRKSIEELRTFNRPLGAFQGSIVLLGNFSYVEEPLKLGNLSGNRFGIVLRNLTLPGASGSNSNSTGNGRXAAAPRTENGAGSGAVNPEGGVSTAGEEVTKNGSDDAADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVEAGAKLEETVERRCTWVKERGFINYFGLQRFGSGGAPTSEVGLAMLKEDWAGAVRLIMTPRLGENEATHESKVHFLKHPTDIKGTLSKLPFFMDAEKSMMQALLRGGPNAHVDALKAVPKNLQLMYLHAFQSLVWNLAASERIKLYGREGVVEGDLVFPKDSAAVLDDNDEPVVELANAASEASADVEGEDADAGGEGEPQGKRAKTGGAPLPPVHAVTKEDVEQGTFQMTDVVLPMPGSGVTYPSNGVGECYTKALEERG--LTEACFNTSTQKSFNLGGAYRRLLQVPKDMQWEMKRYDDHTLHLINTDIDDLLDIDDARIAK-----ENAEKKXXXXXXXXXXXXXXXXXXXXXXXAPAETNKTDLGQQEQPPSVKEGEAGDGKPASDAMDVVDATAEVKPSAESKGRFHALCLHFTLPSAAYATMCLREITQQDTSTSFHTSLN 3261
WPE + +F RF LYKEN DT A+ + K L + G+AGTKDKR V++Q TV ++ L N+ L Q +G+F YV+E L LG L GNRF + LR + A E+ ++ + GFINYFGLQRFGSG PT +G +LK +W AV +I+ PR GE +++ ++ K DI GTL KLP + AE++++Q L + P ++ ALKA+P+ L++MY+H++QS +WN AAS R+K YG E VV GDLV+ K DN E + N SE+ + ++ D G E G L V VT EDV G + + D++LPMPGS V YP N V E Y ++ G LTE N ++ G+YR++ Q P D +WE+ +Y D + L TD+D + I K EKK + N+ D G + SV +G++ +G ES+ AL L FTLP++ YATM +RE+ + TS +FH +LN
Sbjct: 218 WPEHQGKFLRFHLYKENKDTQEALGLITKMLGVQPRSFGFAGTKDKRSVSTQRVTVFKQHASRLAALNKRLIGIQ-----VGDFCYVKEGLLLGQLQGNRFTVTLRGVV--------------------------------------------------------------------------------------------ADSEDVIKASANSLGRLGFINYFGLQRFGSGSVPTQLIGATLLKGEWKAAVSMILDPREGERSEISKARQYY-KETDDIDGTLRKLPRHLVAERAILQCLKKC-PGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVKKYGTEQVVVGDLVYSKG------DNTEKEMTFVN--SESEDENSNDEDDCGRLDEVSATDLPVGTNNL--VKTVTAEDVHSGKYTIGDIILPMPGSRVIYPINDVAEVYHNLAKKDGISLTERVHNVKEFSIISMTGSYRQVFQKPLDFEWELLKYTDSSKPLAETDLDKIAKAKHLNIIKVEELVAGVEKKDPSDCMEHSESLENVVKLS------TDDNEADCGGEL---SVPQGKSLNGS-------------------ESEELQTALKLGFTLPTSCYATMAIRELLKTSTSVAFHKTLN 726
BLAST of mRNA_P-littoralis_Contig191.73.11 vs. uniprot
Match: A0A6J1KMR0_CUCMA (multisubstrate pseudouridine synthase 7 isoform X1 n=4 Tax=Cucurbita TaxID=3660 RepID=A0A6J1KMR0_CUCMA) HSP 1 Score: 257 bits (657), Expect = 2.190e-69 Identity = 202/646 (31.27%), Postives = 287/646 (44.43%), Query Frame = 1
Query: 1345 WPEGRPEFCRFILYKENNDTMGAVSRMCKHLRFSSKVVGYAGTKDKRGVTSQWCTVKRKSIEELRTFN-RPLGAFQGSIVLLGNFSYVEEPLKLGNLSGNRFGIVLRNLTLPGASGSNSNSTGNGRXAAAPRTENGAGSGAVNPEGGVSTAGEEVTKNGSDDAADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVEAGAKLEETVERRCTWVKERGFINYFGLQRFGSGGAPTSEVGLAMLKEDWAGAVRLIMTPRLGENEATHESKVHFLKHPTDIKGTLSKLPFFMDAEKSMMQALLRGGPNAHVDALKAVPKNLQLMYLHAFQSLVWNLAASERIKLYGREGVVEGDLVFPKDSAAVLDDNDEPVVELANAASEASADVEGEDA-DAGGEGEPQGKRAKTGGAPLPP---VHAVTKEDVEQGTFQMTDVVLPMPGSGVTYPSNGVGECY--TKALEERGLTEACFNTSTQKSFNLGGAYRRLLQVPKDMQWEMKRYDDHTLHLINTDIDDLLDIDDARIAKENAEKKXXXXXXXXXXXXXXXXXXXXXXXAPAETNKTDLGQQEQPPSVKEGEAGDGKPASDAMDVVDATAEVKPSAESKGRFHALCLHFTLPSAAYATMCLREITQQDTSTSFHTSLN 3261
WPE +F RF LYKEN DT A+ + K L ++ G+AGTKDKR +T+Q TV ++ L N R +G + LGNFSY++E L LG L GNRF I LR + A E+T++ + GFINYFGLQRFGSG PT VG ++L+ +W GAV +I+ PR GE E++ ++ K DI GTL +LP ++ AE++++Q L + P ++ ALKA+P+ L++MY+H++QS +WN AAS R++ YG + VV GDLV+ K++ A AA + S + ED DA + T P V AV+ EDV+ G F + DVVLP+PGS V YP+N + E Y A + LTE N N+ G+YR + Q PKD +WE+ Y D L L +D+D+LL I KE +K + N+ + G+ Q P + AL L F LP+++YATM +RE+ + TS +FH +LN
Sbjct: 221 WPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRAITTQRVTVFKQHASRLAALNDRLIG------IKLGNFSYIQEGLLLGQLLGNRFTITLRGVV--------------------------------------------------------------------------------------------ADSEDTIKTSAEALGRLGFINYFGLQRFGSGSVPTHLVGASLLRGEWKGAVNMILDPREGETNVIAEAR-NYYKESNDIDGTLKQLPRYLVAERAILQCLKKC-PGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKYGIDKVVVGDLVYCKEN------------HTATAAVQKSEENVDEDCGDANTYDSCHLEEICTLDLPTERNKHVKAVSAEDVQSGNFTIDDVVLPLPGSRVIYPTNDIAEVYHDLAAKDSINLTETIHNVKEFSITNMTGSYRSVFQRPKDYEWELISYVDRNLPLAESDLDNLLKSLSVEITKE---EKMHDKSKDEDSLDSTEQSGSCKKSNKLQANENENGEAAQDPQM-----------------------------------ALKLSFNLPTSSYATMAIRELLKTSTSVAFHKALN 716
BLAST of mRNA_P-littoralis_Contig191.73.11 vs. uniprot
Match: A0A5D6YSG9_9STRA (TRUD domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YSG9_9STRA) HSP 1 Score: 256 bits (655), Expect = 1.050e-68 Identity = 169/517 (32.69%), Postives = 257/517 (49.71%), Query Frame = 1
Query: 1333 GRWAWPEGRPEFCRFILYKENNDTMGAVSRMCKHLRFSSKVVGYAGTKDKRGVTSQWCTVKRKSIEELRTFNRPLGAFQGSIVLLGNFSYVEEPLKLGNLSGNRFGIVLRNLTLPGASGSNSNSTGNGRXAAAPRTENGAGSGAVNPEGGVSTAGEEVTKNGSDDAADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVEAGAKLEETVERRCTWVKERGFINYFGLQRFGSGGAPTSEVGLAMLKEDWAGAVRLIMTPRLGENEATHESKVHFLKHPTDIKGTLSKLPFFMDAEKSMMQALLRGGPNAHVDALKAVPKNLQLMYLHAFQSLVWNLAASERIKLYGREGVVEGDLVFPKDS--AAVLDDNDEPVVELANAASEASADVEGEDADAGGEGEPQGKRAKTGGAPLPPVHAVTKEDVEQGTFQMTDVVLPMPGSGVTYPSNGVGECYTKALEERGLTEACFNTSTQKSFNLGGAYRRLLQVPKDMQWEMKRYDDHTLHLINTDIDDL 2877
G+ AWP GRP+ +F+LYK N +T + ++ K + S GYAGTKDKRGVT+Q+CT+ R S+E L NR + L+G+ YV + L LG+L GN+F + +R L ADA A++ V +W RGF+NYFGLQRFG+ PT EVG A+L+ D+A V L++ P+ G+ E++ F + D++ L LP ++ AE++++Q L G AH A++ +P++L++MY H++QS VWN+ AS+R+ + + V GDLV P D+ AA+LD+ V + + A+ ++G+D DAG E P KR K G + PV VT E++ Q F + DVVLP+PG + YP NG+ Y + L G+ +T ++L G++R LL+ P + E+K Y+D T+ L+ TD+D L
Sbjct: 296 GKNAWPPGRPDHLQFVLYKRNLETNSVMGQLAKAMGVSVAAFGYAGTKDKRGVTTQFCTIYRGSLERLEMLNRAGRGLESFNFLVGDAKYVRDKLNLGDLQGNQFSLAIRGLP----------------------------------------------------PADAVPD---------------------------------AQIHAAV---ASWTA-RGFVNYFGLQRFGTKSVPTHEVGRAILQRDYARVVDLVLQPQEGDATKIAEARARF-QADQDVEAALRALPPYLIAERALLQGLKTYGLGAHAQAIQCIPRHLRMMYTHSYQSFVWNMVASDRVSQFASDAPVVGDLVIPHDAVAAALLDE----FVAVDETDATAAVPLDGDDGDAGSERAP--KRPKVGASIAAPV-LVTAENIAQ--FSVYDVVLPLPGYDIAYPENGLRARYEEILAADGVDFESLQRATNSEYHLPGSFRHLLKKPLAVSHEIKLYEDPTVPLLETDVDRL 713
BLAST of mRNA_P-littoralis_Contig191.73.11 vs. uniprot
Match: A0A1S3CHJ1_CUCME (pseudouridylate synthase 7 homolog isoform X1 n=10 Tax=Benincaseae TaxID=1003877 RepID=A0A1S3CHJ1_CUCME) HSP 1 Score: 255 bits (651), Expect = 1.430e-68 Identity = 207/653 (31.70%), Postives = 293/653 (44.87%), Query Frame = 1
Query: 1345 WPEGRPEFCRFILYKENNDTMGAVSRMCKHLRFSSKVVGYAGTKDKRGVTSQWCTVKRKSIEELRTFN-RPLGAFQGSIVLLGNFSYVEEPLKLGNLSGNRFGIVLRNLTLPGASGSNSNSTGNGRXAAAPRTENGAGSGAVNPEGGVSTAGEEVTKNGSDDAADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVEAGAKLEETVERRCTWVKERGFINYFGLQRFGSGGAPTSEVGLAMLKEDWAGAVRLIMTPRLGENEATHESKVHFLKHPTDIKGTLSKLPFFMDAEKSMMQALLRGGPNAHVDALKAVPKNLQLMYLHAFQSLVWNLAASERIKLYGREGVVEGDLVFPKDS----AAVLDDNDEPVVELANAASEASADVEGEDADAGGEGEPQGKRAKTGGAPLPP-----VHAVTKEDVEQGTFQMTDVVLPMPGSGVTYPSNGVGECYTKAL--EERGLTEACFNTSTQKSFNLGGAYRRLLQVPKDMQWEMKRYDDHTLHLINTDIDDLLDIDDARIAKEN--AEKKXXXXXXXXXXXXXXXXXXXXXXXAPAETNKTDLGQQEQPPSVKEGEAGDGKPASDAMDVVDATAEVKPSAESKGRFHALCLHFTLPSAAYATMCLREITQQDTSTSFHTSLN 3261
WPE +F RF LYKEN DT A+ + K L ++ G+AGTKDKR +++Q TV ++ + N R +G + LGNFSY++E L LG L GNRF I LR V N D V++A A+ T GFINYFGLQRFGSG PT VG ++L+ +W GAV +I+ PR GE +++ ++ K DI GTL +LP ++ AE++++Q L + P ++ ALKA+P+ L++MY+H++QS +WN AAS R++ YG + VV GDLV+ K++ AAV + + + +A S S +E + K G LP V AVT EDV G F + DVVLP+PGS V YP+N + E Y + LTE+ N ++ G+YRR+ Q PKD +WE+ Y D L L +D+ LL I+KE A K A N+T+ GQ P + AL L FTLP+++YATM +RE+ + TS +FH +LN
Sbjct: 221 WPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASRIAALNDRLIG------IKLGNFSYIQEGLLLGQLLGNRFTITLRG----------------------------------------------VVANSED------------------------------------VIKASAEALGT----------HGFINYFGLQRFGSGSVPTHLVGASLLRGEWKGAVNMILDPREGETNEIAKAREYY-KESDDIDGTLKQLPRYLVAERAILQCLKKC-PGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKYGIDKVVVGDLVYCKENHTETAAVQNSEEYEDEDCGDANSYDSCHLE--------------EMCKLG---LPTERNKLVKAVTAEDVLSGNFTIDDVVLPLPGSRVLYPANDIAEVYNDLATKDSISLTESVHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSVEISKEEKIANKSKIEDSLDSTDQSVCCKKDIQLE---AGGNETEYGQGTPDPQM-----------------------------------ALKLSFTLPASSYATMAIRELLKTSTSVAFHKTLN 718
BLAST of mRNA_P-littoralis_Contig191.73.11 vs. uniprot
Match: UPI0012630A26 (multisubstrate pseudouridine synthase 7 isoform X2 n=1 Tax=Pistacia vera TaxID=55513 RepID=UPI0012630A26) HSP 1 Score: 252 bits (644), Expect = 5.830e-68 Identity = 200/641 (31.20%), Postives = 283/641 (44.15%), Query Frame = 1
Query: 1345 WPEGRPEFCRFILYKENNDTMGAVSRMCKHLRFSSKVVGYAGTKDKRGVTSQWCTVKRKSIEELRTFNRPLGAFQGSIVLLGNFSYVEEPLKLGNLSGNRFGIVLRNLTLPGASGSNSNSTGNGRXAAAPRTENGAGSGAVNPEGGVSTAGEEVTKNGSDDAADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVEAGAKLEETVERRCTWVKERGFINYFGLQRFGSGGAPTSEVGLAMLKEDWAGAVRLIMTPRLGENEATHESKVHFLKHPTDIKGTLSKLPFFMDAEKSMMQALLRGGPNAHVDALKAVPKNLQLMYLHAFQSLVWNLAASERIKLYGREGVVEGDLVFPKDSAAVLDDNDEPVVELANAASEASADVEGEDADAGGEGEPQGKRAKTGGAPLPPVHAVTKEDVEQGTFQMTDVVLPMPGSGVTYPSNGVGECYTKALEERG--LTEACFNTSTQKSFNLGGAYRRLLQVPKDMQWEMKRYDDHTLHLINTDIDDLLDIDDARIAKENAEKKXXXXXXXXXXXXXXXXXXXXXXXAPAETNKTDLGQQEQPPSVKEGEAGDGKPASDAMDVVDATAEVKPSAESKGRFHALCLHFTLPSAAYATMCLREITQQDTSTSFHTSLN 3261
WPE + +F RF LYKEN DT A+ + K L S+ G+AGTKDKR V++Q TV ++ L N+ L Q +G+F YV+E L LG L GNRF + LR + A E+ ++ + GFINYFGLQRFGSG PT VG +L+ +W AV +I+ PR GE +++ ++ K DI GTL KLP + AE++++Q L + P + ALKA+P+ L++MY+H++QS +WN AAS R++ YG E VV GDLV+ K DN E EL SE A+ + D G E G L V T ED+ G + + DV+LPMPGS V YP+N V E Y + ++ G LTE N ++ G+YR++ Q D +WE+ +Y D + L TD+D + I KE E + N+ D G++ + P K D + EV+ AL L FTLP++ YATM +RE+ + TS +FH +LN
Sbjct: 171 WPEHQGKFLRFHLYKENKDTQEALGLIGKMLGIQSRSFGFAGTKDKRAVSTQRVTVFKQRASRLAALNKRLIGIQ-----VGDFCYVKEGLLLGQLQGNRFTVTLRGVV--------------------------------------------------------------------------------------------ANSEDVIKASANSLGRLGFINYFGLQRFGSGSVPTQLVGATLLRGEWKAAVSMILDPREGERNEISKAREYY-KETDDIDGTLRKLPRHLVAERAILQCLKKC-PGNFLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVEKYGTEQVVVGDLVYSKA------DNTE---ELTCVNSECEAENCNDIDDCGQLDEVSATELPVGRNNL--VKTATAEDIHTGKYTIDDVILPMPGSRVIYPTNEVAEVYHRLAKKDGINLTEIVHNVKEFSITSMTGSYRQVFQKLLDFEWELLKYTDASKPLAETDLDKIAKAKPLSIIKEE-ELVGGDEKKDPSDCIEQFESLENVIKLSTDDNEADCGRELRVPQFKSLHGSDSQ-------------EVQM---------ALKLGFTLPTSCYATMAIRELLKTSTSVAFHKTLN 678
BLAST of mRNA_P-littoralis_Contig191.73.11 vs. uniprot
Match: A0A1U8DTS7_CAPAN (LOW QUALITY PROTEIN: multisubstrate pseudouridine synthase 7 n=9 Tax=Solanoideae TaxID=424551 RepID=A0A1U8DTS7_CAPAN) HSP 1 Score: 249 bits (635), Expect = 1.670e-66 Identity = 199/654 (30.43%), Postives = 293/654 (44.80%), Query Frame = 1
Query: 1342 AWPEGRPEFCRFILYKENNDTMGAVSRMCKHLRFSSKVVGYAGTKDKRGVTSQWCTVKRKSIEELRTFNRPLGAFQGSIVLLGNFSYVEEPLKLGNLSGNRFGIVLRNLTLPGASGSNSNSTGNGRXAAAPRTENGAGSGAVNPEGGVSTAGEEVTKNGSDDAADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVEAGAKLEETVERRCTWVKERGFINYFGLQRFGSGGAPTSEVGLAMLKEDWAGAVRLIMTPRLGENEATHESKVHFLKHPTDIKGTLSKLPFFMDAEKSMMQALLRGGPNAHVDALKAVPKNLQLMYLHAFQSLVWNLAASERIKLYGREGVVEGDLVFPKDSAAVL--------DDNDEPVVELANAASEASADVEGEDADAGGEGEPQGKRAKTGGAPLPPVHAVTKEDVEQGTFQMTDVVLPMPGSGVTYPSNGVGECYTKALEERG--LTEACFNTSTQKSFNLGGAYRRLLQVPKDMQWEMKRYDDHTLHLINTDIDDLLDIDDARIAKENAEKKXXXXXXXXXXXXXXXXXXXXXXXAPAETNKTDLGQQEQPPSVKEGEAGD---GKPASDAMDVVDATAEVKPSAESKGRFH-ALCLHFTLPSAAYATMCLREITQQDTSTSFHTSLN 3261
++P +F RF L+KEN DT A++ + K L S+ G+AGTKDKR V++Q TV ++ +L N+ L + +G+F +V+E L LG L GNRF I LR GVS E++ K + V G + GFINYFGLQRFGS PT +G A+L+ +W AV LI+ PR GE A + ++ K D+ GTL +LP ++ AEK+++Q L R P ++ ALKA+P+ L++MY+H++QS +WN AAS R++ +G + VV GDLV+ K+ V D N + + +N + D+ P+ + PV + +ED++ GT+ + DV+LP+PGS V YPSN +GE Y ++ G LTE N+ GAYRR+ Q PKD +WE+ Y D T+ L +TD+D IAK + K V+E ++GD GK + ++ K + AL L FTLP++ YATM +RE+ + TS +FH SLN
Sbjct: 223 SYPGHLGKFLRFHLFKENKDTQEALNVIAKMLGIQSRSFGFAGTKDKRAVSTQRVTVFKQQASKLAALNKRLIGIK-----VGDFCHVKEGLLLGQLYGNRFTITLR---------------------------------------GVSAESEDIIK--------------------------------------ASAVALG---------------KHGFINYFGLQRFGSSSVPTHLIGAALLRGEWKAAVSLILDPREGEKNAISTVREYY-KESGDVDGTLRQLPRYLVAEKAILQCLKRS-PGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKHGFDQVVLGDLVYSKEQHIVKETFVAECEDVNVNNMDDYSNLDETSETDL------------PEERNI--------PVKVINEEDLKSGTYTIDDVLLPLPGSRVIYPSNDIGEVYRDLAQKDGISLTETAHKIKEFSITNMTGAYRRVFQKPKDFEWELLSYTDGTVPLADTDLD--------VIAKSVKKSK-----------------------------------------VREEDSGDMVTGKGHEEKINSESGMQSEKSHSGGNAESQMALKLSFTLPASCYATMAVRELLKTSTSVAFHKSLN 708
BLAST of mRNA_P-littoralis_Contig191.73.11 vs. uniprot
Match: UPI0010A55F59 (multisubstrate pseudouridine synthase 7 n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A55F59) HSP 1 Score: 247 bits (630), Expect = 5.330e-66 Identity = 210/695 (30.22%), Postives = 308/695 (44.32%), Query Frame = 1
Query: 1222 KCVQLKMKPDWRRAGGGRKXXXGDLDHXXXXXXXXXXGRWAWPEGRPEFCRFILYKENNDTMGAVSRMCKHLRFSSKVVGYAGTKDKRGVTSQWCTVKRKSIEELRTFN-RPLGAFQGSIVLLGNFSYVEEPLKLGNLSGNRFGIVLRNLTLPGASGSNSNSTGNGRXAAAPRTENGAGSGAVNPEGGVSTAGEEVTKNGSDDAADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVEAGAKLEETVERRCTWVKERGFINYFGLQRFGSGGAPTSEVGLAMLKEDWAGAVRLIMTPRLGENEATHESKVHFLKHPTDIKGTLSKLPFFMDAEKSMMQALLRGGPNAHVDALKAVPKNLQLMYLHAFQSLVWNLAASERIKLYGREGVVEGDLVFPKDSAAVLDDNDEPVVELANAASEASADVE-----GEDADAGGEGEPQGKRAKTGGAPLPPVHAVTKEDVEQGTFQMTDVVLPMPGSGVTYPSNGVGECYTKALEERG--LTEACFNTSTQKSFNLGGAYRRLLQVPKDMQWEMKRYDDHTLHLINTDIDDL---LDIDDARIAKENAEKKXXXXXXXXXXXXXXXXXXXXXXXAPAETNKTDLGQQEQPPS----VKEGEAGDGKPASDAMDVVDATAEVKPSAESKGRFHALCLHFTLPSAAYATMCLREITQQDTSTSFHTSLN 3261
KC+++++ D R G D D+ G WP +F RF LYKEN DT A+ + K L K G+AGTKDKR V++Q TV ++ L + N R +G + +G+F YV+E L LG L GNRF I LR + A E+T++ + + GFINYFGLQRFGSG PT +G A+L+ +W AV +I+ PR GE A +++ ++ K+ D++GTL +LP M AE++++Q+L + P ++ ALKA+P+ L++MY+H++QS +WN AA+ R++ YG E VV GDLV+ KD+AA N S D GE++ E E + V +T ED+E G + + DV+LPMPGS V YP+N V + Y ++ LTE N N+ G+YRR+ Q P + +WE+ Y D + L TD+D + IDD + AP + +L QP S K A D P + + D + S +S+ AL L FTLPS+ YATM +RE+ + TS ++H +LN
Sbjct: 148 KCIRVRVDSDGPRNKGRNSRKRKDRDYKPFDSR----GSENWPANVGKFLRFHLYKENKDTQEALGVIGKMLGTQPKSFGFAGTKDKRAVSTQRITVFKQRASRLASLNDRLIG------IKVGDFCYVKEGLLLGQLFGNRFTITLRGII--------------------------------------------------------------------------------------------ADSEDTIKASADALGKHGFINYFGLQRFGSGSVPTHLIGAALLRGEWKLAVDMILDPRDGERNAITKAREYY-KNSNDVEGTLKQLPRHMVAERAVLQSLKKA-PGNYLQALKAIPRTLRMMYVHSYQSYLWNHAATTRVQKYGTEQVVVGDLVYRKDNAA------------GNGTGFVSRDCSVSCNNGENSS--NEDEEMDVHEERNSH----VKVMTAEDLEAGCYTIDDVILPMPGSRVVYPTNDVAQVYHDWAKKDAISLTECVHNVKEFSITNMTGSYRRVFQKPINFEWELLTYTDRSKPLAETDLDKMGKTRPIDDFKQVN-----------------------------APRWEKEENLDCIRQPESSGDDAKLEIANDETPGDEVELLQDESICTSNSQDSQ---IALKLSFTLPSSCYATMAIRELLKTSTSVAYHKTLN 688 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig191.73.11 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig191.73.11 >prot_P-littoralis_Contig191.73.11 ID=prot_P-littoralis_Contig191.73.11|Name=mRNA_P-littoralis_Contig191.73.11|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1146bp GGGGGGGGRRGGRGGGGRGGWRGGNRGGGGGRWGRGGGRGGGGGRGRGGGback to top mRNA from alignment at P-littoralis_Contig191:244214..256781- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig191.73.11 ID=mRNA_P-littoralis_Contig191.73.11|Name=mRNA_P-littoralis_Contig191.73.11|organism=Pylaiella littoralis U1_48|type=mRNA|length=12568bp|location=Sequence derived from alignment at P-littoralis_Contig191:244214..256781- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig191:244214..256781- >mRNA_P-littoralis_Contig191.73.11 ID=mRNA_P-littoralis_Contig191.73.11|Name=mRNA_P-littoralis_Contig191.73.11|organism=Pylaiella littoralis U1_48|type=CDS|length=3438bp|location=Sequence derived from alignment at P-littoralis_Contig191:244214..256781- (Pylaiella littoralis U1_48)back to top |