mRNA_P-littoralis_Contig191.60.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig191.60.1
Unique NamemRNA_P-littoralis_Contig191.60.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig191.60.1 vs. uniprot
Match: A0A6H5KKV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKV2_9PHAE)

HSP 1 Score: 781 bits (2018), Expect = 5.970e-274
Identity = 445/587 (75.81%), Postives = 475/587 (80.92%), Query Frame = 1
Query:   70 MLIPWALSTVAVYSIASVADSLSSPASLGFDARHGRIQASS---------------TSSRLGARSRVRCRRGIRTRGGG-QPSAGGLHETRPLGWQQRQQQAWQRSALAVDGVEIGTEEAEVA---EGGWGEQNEDDNVSYARMLKFILPTLGIWLASPIMSLVDAGVVGTRSAMELASLGPATVLCESLIYCSTFLAIATTNLQATALANGKRAEAQKVVAQALGLALXXXXXXXXXVQVFGPTVLVHLAGEKSKEVVPAALVYSRVRILGAPASIAAMVLQAACLGARDSVTPLGIVLIASAINGLGDWVTVCRMGMGVFGAAAATASAETVSMLLLGAAVWKAQGKRLYKFVALPSREELKTFLNFAGPIAFALLGKVLCYSVMTLTVTAIGTIPLATHNVMLRVFFFFATFGEALSQTAQAFIPGQLAKERNMKEAKAAAKAAAVQAGT-ATAPEEVRVDPRLSPARTMMRKVLILGVGVGSLNACVAGLVPLHLSHLFTNSLEVAAGMRSLTPLLSWSLLTHACVMGLEGILLARRRLQFLAGCYAINTVVLVTFMQWVRTWPAARGLHGAWMGLLILQTIR 1770
            MLIPWA+ST    SI SVA     P SLG+   HG    +                +S+R+G R RVRC RGI  RGGG +    G+   RP          W+RSA+A D VE+  +   VA   EGGWGEQ +D NVSY RMLKFILPTLGIWLASPIMSLVDAGVVGTRSA ELASLGPATVLCESLIYCSTFLAIA TNLQATALA+GKRAEAQKVVAQALGLAL         VQ FGP VL  LAGEKSKEVVPAALVYSRVRILGAPASIAAMVLQAACLGARDSVTPLG+VLIASA+NGLGDWVTVCRMGMGVFGAAAATASAETVSM+LLG AVW+AQG+R+YKFV LPS EELK FL+FAGPIAFALLGKVLCYSVMTLTVTAIG +PLATHNVMLRVFFFFATFGEALSQTAQAFIPGQLA+ER++K AK A           A A E+   DPRLSPARTMMRKVLILGVGVGS+NACVAGLVPLHL HLFTNSLEVAAGMRSLTPLLSWSLLTHACVMGLEGILLARRRL FLAGCYA+NTVVLV+FMQWVRTWPA RGLHGAWMGLL+LQ IR
Sbjct:    1 MLIPWAISTALASSIVSVAVGFFPPTSLGYTTGHGTRLTTPRPFSRAAGAPGSTPVSSARVGERLRVRCTRGIHARGGGDRHGRDGIR--RP----------WRRSAMATDEVEVEEDSKGVAAMIEGGWGEQKDDGNVSYTRMLKFILPTLGIWLASPIMSLVDAGVVGTRSATELASLGPATVLCESLIYCSTFLAIAVTNLQATALADGKRAEAQKVVAQALGLALSIGLMVAVGVQAFGPRVLAQLAGEKSKEVVPAALVYSRVRILGAPASIAAMVLQAACLGARDSVTPLGVVLIASAMNGLGDWVTVCRMGMGVFGAAAATASAETVSMVLLGLAVWRAQGERVYKFVELPSAEELKVFLDFAGPIAFALLGKVLCYSVMTLTVTAIGPLPLATHNVMLRVFFFFATFGEALSQTAQAFIPGQLARERSIKSAKKAXXXXXXXXXXDAAAAEDSSADPRLSPARTMMRKVLILGVGVGSVNACVAGLVPLHLPHLFTNSLEVAAGMRSLTPLLSWSLLTHACVMGLEGILLARRRLGFLAGCYALNTVVLVSFMQWVRTWPATRGLHGAWMGLLLLQIIR 575          
BLAST of mRNA_P-littoralis_Contig191.60.1 vs. uniprot
Match: D7G808_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G808_ECTSI)

HSP 1 Score: 683 bits (1763), Expect = 5.530e-238
Identity = 386/497 (77.67%), Postives = 406/497 (81.69%), Query Frame = 1
Query:  343 LAVDGVEIGTEEAEVA---EGGWGEQNEDDNVSYARMLKFILPTLGIWLASPIMSLVDAGVVGTRSAMELASLGPATVLCESLIYCSTFLAIATTNLQATALANGKRAEAQKVVAQALGLALXXXXXXXXXVQVFGPTVLVHLAGEKSKEVVPAALVYSRVRILGAPASIAAMVLQAACLGARDSVTPLGIVLIASAINGLGDWVTVCRMGMGVFGAAAATASAETVSMLLLGAAVWKAQGKRLYKFVALPSREELKTFLNFAGPIAFALLGKVLCYSVMTLTVTAIGTIPLATHNVMLRVFFFFATFGEALSQTAQAFIPGQLAKERNMKEAKAAAKAAAVQA-GTATAPEEVRVDPRLSPARTMMRKVLILGVGVGSLNACVAGLVPLHLSHLFTNSLEVAAGMRSLTPLLSWSLLTHACVMGLEGILLARRRLQFLAGCYAINTVVLVTFMQWVRTWPAARGLHGAWMGLLILQTIRVAEFGTHLLWLNRRSRV 1821
            +A+DGVE+  +   VA   EGGWGEQ +D NVSY RMLKFILPTLGIWLASPIMSLVDAGVVGTRSA ELASLGPATVLCESLIYCSTFLAIA TNLQATALA+GKRAEAQKVVAQALGLAL         VQ FGP VL  LAGEKSKEVVPAALVYSR+RILGAPASIAAMVLQAACLGARDSVTPLG+VLIASA+NGLGDWVTVCRMGMGVFGAAAATASAETVSM+LLG AVW+AQG+R+YKFV LPS EELK FL+FAGPIAFALLGKVLCYSVMTLTVTAIG +PLATHNVMLRVFFFFATFGEALSQTAQAFIPGQLA+ER++K AK A         G   A E+   DPRLSPARTMMRKVLILGVGVGSLNACVAGLVPLHL HLFTNSLEVAAGMRSLTPLLSWSLLTHACVMGLEGILLA+RRL FLAG                                       VAEFG HLLWLNRRSRV
Sbjct:    1 MAIDGVEVEEDSKGVAATIEGGWGEQKDDGNVSYTRMLKFILPTLGIWLASPIMSLVDAGVVGTRSATELASLGPATVLCESLIYCSTFLAIAVTNLQATALADGKRAEAQKVVAQALGLALSIGLMVAVGVQAFGPRVLAQLAGEKSKEVVPAALVYSRMRILGAPASIAAMVLQAACLGARDSVTPLGVVLIASAVNGLGDWVTVCRMGMGVFGAAAATASAETVSMVLLGLAVWRAQGERVYKFVELPSAEELKVFLDFAGPIAFALLGKVLCYSVMTLTVTAIGPLPLATHNVMLRVFFFFATFGEALSQTAQAFIPGQLARERSIKSAKKAXXXXXXXXXGDTAAAEDSSADPRLSPARTMMRKVLILGVGVGSLNACVAGLVPLHLPHLFTNSLEVAAGMRSLTPLLSWSLLTHACVMGLEGILLAQRRLGFLAG---------------------------------------VAEFGMHLLWLNRRSRV 458          
BLAST of mRNA_P-littoralis_Contig191.60.1 vs. uniprot
Match: A0A835YQ91_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ91_9STRA)

HSP 1 Score: 334 bits (856), Expect = 1.440e-102
Identity = 214/458 (46.72%), Postives = 278/458 (60.70%), Query Frame = 1
Query:  493 MSLVDAGVVGTRSAMELASLGPATVLCESLIYCSTFLAIATTNLQATALANGKRAEAQKVVAQALGLALXXXXXXXXXVQVFGPTVLVHLAGEKSKEVVPAALVYSRVRILGAPASIAAMVLQAACLGARDSVTPLGIVLIASAINGLGDWVTVCRMGMGVFGAAAATASAETVSMLLLGAAVWKAQGKRLYKFVALPSREELKTFLNFAGPIAFALLGKVLCYSVMTLTVTAIG-TIPLATHNVMLRVFFFFATFGEALSQTAQAFIPGQLAKERNMKEAKAAAKAAAVQAG------------TATAPEEVRVDPRLSPART---MMRKVLILGVGVGSLNACVAGLVPLHLSHLFTNSLEVAAGMRSLTPLLSWSLLTHACVMGLEGILLARRRLQFLAGCYAINTVVLVTFMQWVRTWPAARGLHGAWMGLLILQTIRVAEFGTHLLWLNRRSR 1818
            MSLVD GVVG RS+++LA+LGPAT LC+SL+Y   FL+IATTNL A+ALANG + E+QKVV+QAL + L         V +FG  +++  AG  +  + P AL YS +R++GAPA +A+M+ QAACLG++DSVTPL +VL   A N +GD   V  MGMG+ GAA AT+ +E + M LL  AV + QG R+Y F+A+P R++   F+ FAGPI   LL K+L YS MT+ VT  G T+ LA H  MLR+FFFF TFG++LSQ AQAF+PG +A +R    A AAA                       AP   R  P  +P      M+RK+L L  G+G   A  AGLVPL L HLFTN   +   MR L P+LSWSLL HA VMGLEGILLA+R L FLA  Y +N ++ V                           +R+A+FG+ L+ L R+ R
Sbjct:    1 MSLVDTGVVGQRSSLDLAALGPATNLCDSLLYGCAFLSIATTNLLASALANGDKRESQKVVSQALAIGLTFGTALSIAVFLFGTRMMLWSAGGNAA-IAPIALKYSNIRMIGAPACLASMIAQAACLGSKDSVTPLFVVLACGAFNAVGDVFLVRTMGMGIRGAAIATSVSEVIGMGLLMRAVARMQGPRVYPFIAMPGRQDFWKFMTFAGPIFVTLLCKILFYSGMTVLVTGGGDTVMLAAHTCMLRIFFFFTTFGDSLSQAAQAFLPGMMASDR----AAAAAHRKXXXXXXXXXXRGANLNFNGDAPSAQRRAPAQAPVSAGNLMIRKLLTLAAGIGVCMALSAGLVPLRLPHLFTNDALITDQMRRLVPVLSWSLLVHASVMGLEGILLAKRELSFLAKTYLVNAIMAV---------------------------LRLAQFGSRLMVLKRQER 426          
BLAST of mRNA_P-littoralis_Contig191.60.1 vs. uniprot
Match: W7TLJ7_9STRA (Dna-damage-inducible protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLJ7_9STRA)

HSP 1 Score: 319 bits (818), Expect = 1.150e-94
Identity = 202/456 (44.30%), Postives = 265/456 (58.11%), Query Frame = 1
Query:  436 ARMLKFILPTLGIWLASPIMSLVDAGVVGTRSAMELASLGPATVLCESLIYCSTFLAIATTNLQATALANGKRAEAQKVVAQALGLALXXXXXXXXXVQVFGPTVLVHLAGEKSKEVVPAALVYSRVRILGAPASIAAMVLQAACLGARDSVTPLGIVLIASAINGLGDWVTVCRMGMGVFGAAAATASAETVSMLLLGAAVWKAQG-KRLYKFVALPSR-EELKTFLNFAGPIAFALLGKVLCYSVMTLTVTAIGTIPLATHNVMLRVFFFFATFGEALSQTAQAFIPGQLAKERNMKEAKAAAKAAAVQAGTATAPEEVRVDPRLSPARTMMRKVLILGVGVGSLNACVAGLVPLHLSHLFTNSLEVAAGMRSLTPLLSWSLLTHACVMGLEGILLARRRLQFLAGCYAINTVVLVTFMQWVRTWPAARGLHGAWMGLLILQTIRVAEFGTHLL 1797
            A +L+F +PTLGIWLA PIMSLVD  VVG  S +ELA +GPAT LC+S IY  TFLA+ATTNL A ALA+G  A++Q VV+ AL +AL         ++  G  +L    G     ++P AL Y+ +R LGAP  +  MV Q++ LGA+DSVTPL + L A AIN + D   V     G+ GAAAAT  AE V  ++L  A+ +AQG +R Y F+AL S  +++  F  FAGP+ FAL GK LCY+ + +    +G +PLA H VMLR FFFF TFG++LS TAQAF+PG L                              VD        ++R+++ + +GVG LNA +AGL+P     LFT S  +   M  + P LS  LL HAC M LEG LLA R L+FLA  YAINT++++  ++  R    A G+ G W  LL  Q  R   F   LL
Sbjct:  155 AALLRFTIPTLGIWLAGPIMSLVDTSVVGLSSDLELAGMGPATNLCDSFIYLFTFLAVATTNLLAGALADGDEAKSQTVVSHALAIALGAGILVMLVIEFAGKRMLAATIGADGPLLIPVALKYTNIRALGAPFVLVGMVAQSSLLGAKDSVTPLLVTLGAGAINLILDMTLVSFGKCGIAGAAAATVVAEIVGTVVLLRALKRAQGPRRFYPFIALSSPLKDIAKFFTFAGPVFFALFGKSLCYTSLGIAAQMMGAVPLAAHQVMLRCFFFFTTFGDSLSTTAQAFLPGFL------------------------------VDDNKLAIGKVVRRLVSISLGVGGLNAMLAGLLPSFFPGLFTTSAAIVGQMHLIAPWLSLCLLAHACTMALEGTLLAERELRFLASSYAINTLLVLVGLR--RLQHVAAGIQGVWACLLYFQVSRCIIFALRLL 578          
BLAST of mRNA_P-littoralis_Contig191.60.1 vs. uniprot
Match: A0A8J9WM82_9CHLO (Protein DETOXIFICATION 46, chloroplastic n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WM82_9CHLO)

HSP 1 Score: 241 bits (616), Expect = 5.230e-66
Identity = 169/469 (36.03%), Postives = 246/469 (52.45%), Query Frame = 1
Query:  442 MLKFILPTLGIWLASPIMSLVDAGVVGTRSAMELASLGPATVLCESLIYCSTFLAIATTNLQATALANGKRAEAQKVVAQALGLALXXXXXXXXXVQVFGPTVLVHLAGEKSKEVVPAALVYSRVRILGAPASIAAMVLQAACLGARDSVTPLGIVLIASAINGLGDWVTVCRMGMGVFGAAAATASAETVSMLLLGAAVWKAQGKRLYKFVA---------------LPSREELKTFLNFAGPIAFALLGKVLCYSVMTLTVTAIGTIPLATHNVMLRVFFFFATFGEALSQTAQAFIPGQLAKERNMKEAKAAAKAAAVQAGTATAPEEVRVDPRLSPARTMMRKVLILGVGVGSLNACVAGLVPLHLSHLFTNSLEVAAGMRSLTPLLSWSLLTHACVMGLEGILLARRRLQFLAGCYAINTVVLVTFMQWVR--TWPAARGLHGAWMGLLILQTIRVAEFGTHLL 1797
            +L+F LPTLGIW+ +P++SLVD  VVGTRSA ELA+LGP T+LC+   Y  TFLA ATTN+ A + A   +A+A  +++ AL ++L         +  + P  L  +AG+ S  VV  A+ Y RVR LG PA++   V QA  L A D +TPL    +A   N LGD + VC  G G+ GAA ATA A+   ++  GA +W      LY+ +A               LPS + +  F+ +AGPIA  L+ KV+ Y VMT   + +G + +  H+V+   + FF T G+A+SQ AQ+F+PG++ + +                                 A+++ ++++  G  VG+ N+  AG V +    LFTNS EV A M  + P +  +L+ H   M  EG+LLA R L FL   Y  N + ++  +  +    WP   GL G W  LL  Q  R+   G  LL
Sbjct:  163 LLRFTLPTLGIWIINPVLSLVDTSVVGTRSARELAALGPGTMLCDGNAYIFTFLAAATTNMLAISFARRDKAQASGILSDALFISLGLGVALAIAMYFYAPPALQRIAGQASAAVVEPAVTYVRVRCLGLPAALVIFVAQAFFLAAMDPMTPLLAATLAGVANLLGDILLVCGFGWGIAGAALATAVAQ---IMTAGALLWG-----LYRPLAKRSLFPGWRADVRWRLPSLQSVINFVAYAGPIAGVLITKVIIYGVMTTVASYLGPVTVGAHHVVQSTYMFFCTCGDAVSQAAQSFLPGKVGRPK--------------------------------AAQSLGKQLMTTGFIVGTFNSIFAGCVVVFAPTLFTNSPEVVAMMGRMLPFMCMALVIHTASMATEGMLLAGRDLSFLLWSYIANMIAVLWALAALHYGPWPLT-GL-GLWWCLLQFQLFRLLVNGVRLL 589          
BLAST of mRNA_P-littoralis_Contig191.60.1 vs. uniprot
Match: A0A0M0J4L8_9EUKA (Enhanced disease susceptibility (Fragment) n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J4L8_9EUKA)

HSP 1 Score: 233 bits (595), Expect = 1.140e-63
Identity = 173/474 (36.50%), Postives = 250/474 (52.74%), Query Frame = 1
Query:  436 ARMLKFILPTLGIWLASPIMSLVDAGVVGTRSAMELASLGPATVLCESLIYCSTFLAIATTNLQATALANGKRAEAQKVVAQALGLALXXXXXXXXXVQVFGPTVLVHLAGEKSKEVVPAALVYSRVRILGAPASIAAMVLQAACLGARDSVTPLGIVLIASAINGLGDWVTVCRMGMGVFGAAAATASAETVSMLLLGAAVWK---------------------AQGKRLYKFVALPSREELKTFLNFAGPIAFALLGKVLCYSVMTLTVTAIGTIPLATHNVMLRVFFFFATFGEALSQTAQAFIPGQLAKERNMKEAKAAAKAAAVQAGTATAPEEVRVDPRLSPARTMMRKVLILGVGVGSLNACVAGLVPLHLSHLFTNSLEVAAGMRSLTPLLSWSLLTHACVMGLEGILLARRRLQFLAGCYAINTVVLVTFMQWVRTWPAARGLHGAWMGLLILQTIRVAEFGTHL 1794
            A +++FI+PTL   L+S +MS+VD  VVG+ SA ELA+LGPAT+L +S  Y   +L +ATT+L ATALA G + EA   ++ AL +AL         +   GP  L  L    + EVVPAA  Y R+R+ G PA +  +VLQAACLGA+DS++PL ++L+  A+N   D V V   GMG+ GAA AT +A+ +   LL   V +                     +QG +       PS   ++TFL FAGP+A  L+GK+ CY+ MTL  +  G   LA H V+  +FF    +G+A+SQT+QAF+P               A      +G+ T      + P  + AR + R++L L + +G+  +  A LV   LS LFT+ + V A +     LL  +LL H   M  EG+L+    ++FLA  YA N  + +T +  V       GL   W  L + Q +R+  F   L
Sbjct:   70 ADLIRFIVPTLAALLSSEVMSVVDTAVVGSCSATELAALGPATMLVDSSAYLFFWLNVATTSLFATALAAGDQNEAFSTLSDALYVALLCGLGVSVFIACLGPATL-QLICASALEVVPAATRYLRIRMFGYPAFLVGLVLQAACLGAKDSLSPLLVLLVCGALNLGLDLVLVRSCGMGIGGAAIATLAAQLLQTALLAYVVQRXXXXXXXXXXXVATSASPVLASQGPQWLLLRGRPSLPRIRTFLAFAGPMALVLMGKIACYNSMTLAAST-GVASLAAHQVLNSIFFVGCKYGDAISQTSQAFLPACFPS---------GAATGLQGSGSPTKASTAVLPP--AAARRLSRRLLRLSISMGAFVSTAAYLVTTRLSTLFTSDVSVTAQVLRCASLLFVALLLHPPTMASEGLLIGSLEVRFLAKSYAANVAIFLTALYVVS--KRQLGLLAVWATLAMFQLVRLGTFTMRL 528          
BLAST of mRNA_P-littoralis_Contig191.60.1 vs. uniprot
Match: R1DI57_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DI57_EMIHU)

HSP 1 Score: 231 bits (590), Expect = 6.110e-63
Identity = 174/483 (36.02%), Postives = 249/483 (51.55%), Query Frame = 1
Query:  421 DNVSYARMLKFILPTLGIWLASPIMSLVDAGVVGTRSAMELASLGPATVLCESLIYCSTFLAIATTNLQATALANGKRAEAQKVVAQALGLALXXXXXXXXXVQVFGPTVLVHLAGEKSKEVVPAALVYSRVRILGAPASIAAMVLQAACLGARDSVTPLGIVLIASAINGLGDWVTVCRMGMGVFGAAAATASAETVSMLLLGAAVWKAQGKRLYKFVALP-------SREELKTFLNFAGPIAFALLGKVLCYSVMTLTVTAIGTIPLATHNVMLRVFFFFATFGEALSQTAQAFIPGQLAKERNMKEAKAAAKAAAVQAGTATAPEEVRVDPRLSPARTMMRKVLILGVGVGSLNACVAGLVPLHLSHLFTNSLEVAAGMRSLTPLLSWSLLTHACVMGLEGILLARRRLQFLAGCYAINTVVLVTFMQWVRTWPAARGLHGAWMGLLILQTIRVAEFGTHL-----------LWLNRRS 1815
            ++V+   +L+F LP L   L++ IMS+VD  VVGT    +LA+LGPAT+L +S +Y   +L +A TNL AT  A G+  +A  V++ AL ++L         +   G   L  +    +   +P A  Y  +RILG PA + A VLQ AC G +D+ TP   +++   +N   D   V   GMG+ GAA+AT  ++ V +L+L A + K +  RL   V  P       S   L  FL+FAGPI   L+GK+ CY+ MTL  TA G + LA H V+  VFF    FG+A+SQTAQA++P  L     M+                 APE+  V+        + RK+L++ + +G   +  A  V L  S +FT    VAA M ++ PLL  +L  H   M LEG+LL  R+L FLAG YA N +V ++ +  +     A GL   W  L   Q +RV EF T +            WL RR+
Sbjct:   85 EDVTALELLRFTLPVLTAALSAEIMSVVDTAVVGTLGPQQLAALGPATMLSDSTVYLFFWLNVACTNLFATHFARGEHRDAFAVLSDALYVSLACAALLVVGLSWGGGAALARICA-MAPGALPGAKQYLAIRILGVPALMTATVLQGACTGMKDATTPFIAIVLGGLLNLALDLWLVLGCGMGIAGAASATVVSQVVQVLVL-AVIVKRKRSRLVPGVTAPTLLQRPPSPARLVDFLSFAGPIFCVLIGKISCYNSMTLAATAGGVVALAGHQVVATVFFLGCKFGDAISQTAQAYLPACLPAAARMR--------------PGGAPEKGAVE--------LSRKLLLVSMLLGGAVSLAAVGVVLGCSGVFTQDAAVAAAMATVAPLLGVALSIHPATMCLEGLLLGGRQLGFLAGAYAANVLVFLSSLHAIAR--RALGLRYVWAALAAFQLVRVCEFATRVRAVGLLDSLLPAWLRRRA 541          
BLAST of mRNA_P-littoralis_Contig191.60.1 vs. uniprot
Match: K0T8C3_THAOC (Polysacc_synt_C domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T8C3_THAOC)

HSP 1 Score: 226 bits (577), Expect = 2.220e-60
Identity = 171/544 (31.43%), Postives = 269/544 (49.45%), Query Frame = 1
Query:  337 SALAVDGVEIGTEE-AEVAEGGWGEQNED--DNVSYARMLKFILPTLGIWLASPIMSLVDAGVVGT--------------RSAMELASLGPATVLCESLIYCSTFLAIATTNLQATALANGKRAEAQKVVAQALGLALXXXXXXXXXVQVFGPTVLVHLAG------------------EKSKEVVPAALVYSRVRILGAPASIAAMVLQAACLGARDSVTPLGIVLIASAINGLGDWVTVCRMGMGVFGAAAATASAET------VSMLLLGAAVWKAQGKRL--------YKFVALPSREELKTFLNFAGPIAFALLGKVLCYSVMTLTVTAIGTIPLATHNVMLRVFFFFATFGEALSQTAQAFIPGQLA-KERNMKEAKAAAKAAAVQAGTATAPEEVRVDPRLSPARTMMRKVLILGVGVGSLNACVAGLVPLHLSHLFTNSLEVAAGMRSLTPLLSWSLLTHACVMGLEGILLARRRLQFLAGCYAINTVVLVTFMQWVRTWPAARGLHGAWMGLLILQTIRVAEFGTHLLWLNRRSR 1818
            SA A    +  T+E A    GG GE N       SY R+L F+  T  IW++ P++SLVD+  VG                S ++LA+LGPA VLC+S IY + F+A+ATTN  ATA A   +AE  + ++  +G++L         V + G  +L  + G                  +K+ EV+  AL YSR+R L +P ++  +  Q+A L A D+ TP   VL+ASAIN   D++ V + G+GV GAAAATA A        V  L L    WK+  +          YKFV  P R+   + L  AGP+   +  K+  Y+ +T+   + G + LA  N+++R+FFFFAT G+AL+Q +Q F+PG L  K+R +                     E  V    +PART+++++ ++    G +N  +  L+  +   +FT+   +   M  ++P +  +L  H   M LEG ++A     +L G Y +   VL+  +++     A +   G W  LL+ Q +R+++FG  + W    S+
Sbjct:  104 SAAAAGEEQANTKENASKINGGSGEPNAPFVGLPSYKRILSFVSTTFLIWVSEPLLSLVDSATVGRFAGRSTAAGSSSDLASVVQLAALGPAVVLCDSSIYLTLFIAMATTNKLATAFAKEDKAEQIETISHVMGVSLAVGSLLLLFVMLRGEGLLASILGPDGAKIATTGAWGATKQVDKTSEVLSEALGYSRIRSLVSPLAVMGLTAQSALLCAGDTRTPALAVLLASAINCALDYLLVAKFGLGVRGAAAATAVASASANSFLVRKLYLMFNSWKSSFRSSVGNKDDAEYKFVTFPDRKSFLSLLKLAGPLFGVMAAKIFGYNSLTVRAGSFGLVALACQNILMRIFFFFATVGDALNQASQTFLPGLLVIKDRGV--------------------TETHVTAVENPARTLLKRLTVISCLSGLVNCILGRLIARYAGGIFTSDANLIRLMAHISPFMGLALSLHPLTMALEGSIIAANDAMYLVGTYGLTLAVLLAQLKF-----ACKDFLGVWHTLLLFQMLRISQFGIRV-WKKTASK 621          
BLAST of mRNA_P-littoralis_Contig191.60.1 vs. uniprot
Match: D8R6V7_SELML (Uncharacterized protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R6V7_SELML)

HSP 1 Score: 217 bits (552), Expect = 9.990e-59
Identity = 152/457 (33.26%), Postives = 241/457 (52.74%), Query Frame = 1
Query:  439 RMLKFILPTLGIWLASPIMSLVDAGVVGTRSAMELASLGPATVLCESLIYCSTFLAIATTNLQATALANGKRAEAQKVVAQALGLALXXXXXXXXXVQVFGPTVLVHLAGEKSKEVVPAALVYSRVRILGAPASIAAMVLQAACLGARDSVTPLGIVLIASAINGLGDWVTVCRMGMGVFGAAAATASAETVSMLLLGAAVWKAQGKRLYKFVALPSREELKTFLNFAGPIAFALLGKVLCYSVMTLTVTAIGTIPLATHNVMLRVFFFFATFGEALSQTAQAFIPGQLA-KERNMKEAKAAAKAAAVQAGTATAPEEVRVDPRLSPARTMMRKVLILGVGVGSLNACVAGLVPLHLSHLFTNSLEVAAGMRSLTPLLSWSLLTHACVMGLEGILLARRRLQFLA----GCYAINTVVLVTFMQWVRTWPAARGLHGAWMGLLILQTIRVAEFGTHL 1794
            ++  F  P LGIWL+ PIMSL+D  VVGT S+++LA+LGP TV+C+ L Y   FL++AT+NL AT+LAN    EA   +A+ L +A          ++    ++L    G K+  +VPAA  Y  +R    PA +  MV Q+A LG +DS +PL ++L+AS +N  GD +    +G G+ GAA ATA ++ V+ +L+  ++ KA+G      V +PS +++   +  A P+   +L K+  Y+ +T   T++G + L  H VM+ +F  F+  GE L+QTAQ+F+P  ++ K RN ++                             ART+++ +L  G  +G   A +   VP  +  LFTN   + A M S+     WS++     + LEG LLA R L FL      C+   ++++  F +         GL+  W  L++ Q+ R+A   T L
Sbjct:    7 QIFAFAGPALGIWLSGPIMSLIDTSVVGTTSSLQLAALGPGTVMCDGLSYVFMFLSVATSNLIATSLANKDEKEAANHLARLLFVAFGCGMAMLAAIRFSSSSMLQAFVGAKNSGIVPAAATYVNIRAWAWPAVLVTMVAQSASLGMQDSWSPLKVLLVASLVNAFGDILLCTFLGYGIAGAAWATALSQYVAGILMLTSL-KAKGYNPLAIV-VPSFKDILQMIEIAAPVLMTMLSKICFYTTITYFATSLGPLTLGAHQVMIGIFTLFSVCGEPLAQTAQSFMPELISGKTRNFEQ-----------------------------ARTLLKTLLYTGAILGFSLASIGVAVPFLVPQLFTNDSAIVAQMHSVAFPFFWSIVLTPPALSLEGTLLAGRDLGFLGLSMTSCFVCGSLLMKIFHK------LGLGLNSCWWTLVLFQSARLAASYTRL 426          
BLAST of mRNA_P-littoralis_Contig191.60.1 vs. uniprot
Match: D8QNB4_SELML (Uncharacterized protein n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QNB4_SELML)

HSP 1 Score: 213 bits (542), Expect = 2.460e-57
Identity = 151/457 (33.04%), Postives = 238/457 (52.08%), Query Frame = 1
Query:  439 RMLKFILPTLGIWLASPIMSLVDAGVVGTRSAMELASLGPATVLCESLIYCSTFLAIATTNLQATALANGKRAEAQKVVAQALGLALXXXXXXXXXVQVFGPTVLVHLAGEKSKEVVPAALVYSRVRILGAPASIAAMVLQAACLGARDSVTPLGIVLIASAINGLGDWVTVCRMGMGVFGAAAATASAETVSMLLLGAAVWKAQGKRLYKFVALPSREELKTFLNFAGPIAFALLGKVLCYSVMTLTVTAIGTIPLATHNVMLRVFFFFATFGEALSQTAQAFIPGQLA-KERNMKEAKAAAKAAAVQAGTATAPEEVRVDPRLSPARTMMRKVLILGVGVGSLNACVAGLVPLHLSHLFTNSLEVAAGMRSLTPLLSWSLLTHACVMGLEGILLARRRLQFLA----GCYAINTVVLVTFMQWVRTWPAARGLHGAWMGLLILQTIRVAEFGTHL 1794
            ++  F  P LGIWL+ PIMSL+D  VVGT S+++LA+LGP TV+C+ L Y   FL++AT+NL AT+LAN    EA   +A+ L +A          ++      L    G K+  +VPAA  Y  +R    PA +  MV Q+A LG +DS +PL ++L+AS +N  GD +    +G G+ GAA ATA ++ V+ +L+  ++ KA+G      V +PS +++   +  A P+   +L K+  Y+ +T   T++G + L  H VM+ +F  F+  GE L+QTAQ+F+P  ++ K RN ++                             ART+++ +L  G  +G   A +   VP  +  LFTN   + A M S+     WS++     + LEG LLA R L FL      C+   ++++  F +         GL+  W  L++ Q+ R+    T L
Sbjct:    7 QIFAFAGPALGIWLSGPIMSLIDTSVVGTTSSLQLAALGPGTVMCDGLSYVFMFLSVATSNLIATSLANKDEKEAANHLARLLFVAFGCGMAMLAAIRFSSNFFLSAFVGAKNSGIVPAAATYVNIRAWAWPAVLVTMVAQSASLGMQDSWSPLKVLLVASLVNAFGDILLCTFLGYGIAGAAWATALSQYVAGILMLTSL-KAKGYNPLAIV-VPSFKDILQMIEIAAPVLMTMLSKICFYTTITYFATSLGPLTLGAHQVMIGIFTLFSVCGEPLAQTAQSFMPELISGKTRNFEQ-----------------------------ARTLLKTLLYTGAILGFSLASIGVAVPFLVPQLFTNDSAIVAQMHSVAFPFFWSIVLTPPALSLEGTLLAGRDLGFLGLSMTSCFVCGSLLMKIFHK------LGLGLNSCWWTLVLFQSARLTASYTRL 426          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig191.60.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KKV2_9PHAE5.970e-27475.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G808_ECTSI5.530e-23877.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YQ91_9STRA1.440e-10246.72Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TLJ7_9STRA1.150e-9444.30Dna-damage-inducible protein n=2 Tax=Monodopsidace... [more]
A0A8J9WM82_9CHLO5.230e-6636.03Protein DETOXIFICATION 46, chloroplastic n=1 Tax=C... [more]
A0A0M0J4L8_9EUKA1.140e-6336.50Enhanced disease susceptibility (Fragment) n=1 Tax... [more]
R1DI57_EMIHU6.110e-6336.02Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
K0T8C3_THAOC2.220e-6031.43Polysacc_synt_C domain-containing protein n=1 Tax=... [more]
D8R6V7_SELML9.990e-5933.26Uncharacterized protein n=3 Tax=Selaginella moelle... [more]
D8QNB4_SELML2.460e-5733.04Uncharacterized protein n=1 Tax=Selaginella moelle... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig191contigP-littoralis_Contig191:219437..227149 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G808
Preferred nameEDS5
PFAMsMatE
Model size2591
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
GOsGO:0001101,GO:0002376,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006082,GO:0006725,GO:0006950,GO:0006952,GO:0006955,GO:0008150,GO:0008152,GO:0009058,GO:0009507,GO:0009526,GO:0009536,GO:0009605,GO:0009607,GO:0009617,GO:0009624,GO:0009696,GO:0009697,GO:0009719,GO:0009725,GO:0009751,GO:0009941,GO:0009987,GO:0010033,GO:0010817,GO:0014070,GO:0016053,GO:0016999,GO:0017000,GO:0017144,GO:0018958,GO:0019438,GO:0019752,GO:0031347,GO:0031348,GO:0031967,GO:0031975,GO:0032787,GO:0042221,GO:0042445,GO:0042446,GO:0042493,GO:0042537,GO:0042742,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0045087,GO:0046189,GO:0046394,GO:0046677,GO:0048519,GO:0048583,GO:0048585,GO:0050789,GO:0050896,GO:0051704,GO:0051707,GO:0065007,GO:0065008,GO:0071704,GO:0072330,GO:0080134,GO:0098542,GO:1901360,GO:1901362,GO:1901576,GO:1901615,GO:1901617,GO:1901700
Exons11
Evalue4.09e-243
EggNOG OGsCOG0534@1|root,KOG1347@2759|Eukaryota
Ec32 ortholog descriptionMulti antimicrobial extrusion protein
Ec32 orthologEc-06_009720.1
Descriptionantiporter activity
Cds size1770
COG categoryV
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig191.60.1prot_P-littoralis_Contig191.60.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig191 219506..226397 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789919.7917273-UTR-P-littoralis_Contig191:219436..2195051680789919.7917273-UTR-P-littoralis_Contig191:219436..219505Pylaiella littoralis U1_48UTRP-littoralis_Contig191 219437..219505 +
1680789919.934075-UTR-P-littoralis_Contig191:226397..2271491680789919.934075-UTR-P-littoralis_Contig191:226397..227149Pylaiella littoralis U1_48UTRP-littoralis_Contig191 226398..227149 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789919.8018153-CDS-P-littoralis_Contig191:219505..2196081680789919.8018153-CDS-P-littoralis_Contig191:219505..219608Pylaiella littoralis U1_48CDSP-littoralis_Contig191 219506..219608 +
1680789919.8178184-CDS-P-littoralis_Contig191:220879..2212271680789919.8178184-CDS-P-littoralis_Contig191:220879..221227Pylaiella littoralis U1_48CDSP-littoralis_Contig191 220880..221227 +
1680789919.8329737-CDS-P-littoralis_Contig191:221827..2219761680789919.8329737-CDS-P-littoralis_Contig191:221827..221976Pylaiella littoralis U1_48CDSP-littoralis_Contig191 221828..221976 +
1680789919.8450372-CDS-P-littoralis_Contig191:222538..2226521680789919.8450372-CDS-P-littoralis_Contig191:222538..222652Pylaiella littoralis U1_48CDSP-littoralis_Contig191 222539..222652 +
1680789919.8544397-CDS-P-littoralis_Contig191:222920..2231911680789919.8544397-CDS-P-littoralis_Contig191:222920..223191Pylaiella littoralis U1_48CDSP-littoralis_Contig191 222921..223191 +
1680789919.863166-CDS-P-littoralis_Contig191:223707..2238051680789919.863166-CDS-P-littoralis_Contig191:223707..223805Pylaiella littoralis U1_48CDSP-littoralis_Contig191 223708..223805 +
1680789919.8750465-CDS-P-littoralis_Contig191:224275..2243441680789919.8750465-CDS-P-littoralis_Contig191:224275..224344Pylaiella littoralis U1_48CDSP-littoralis_Contig191 224276..224344 +
1680789919.8861456-CDS-P-littoralis_Contig191:224897..2251091680789919.8861456-CDS-P-littoralis_Contig191:224897..225109Pylaiella littoralis U1_48CDSP-littoralis_Contig191 224898..225109 +
1680789919.903174-CDS-P-littoralis_Contig191:225263..2254821680789919.903174-CDS-P-littoralis_Contig191:225263..225482Pylaiella littoralis U1_48CDSP-littoralis_Contig191 225264..225482 +
1680789919.9172335-CDS-P-littoralis_Contig191:225771..2258881680789919.9172335-CDS-P-littoralis_Contig191:225771..225888Pylaiella littoralis U1_48CDSP-littoralis_Contig191 225772..225888 +
1680789919.9256272-CDS-P-littoralis_Contig191:226327..2263971680789919.9256272-CDS-P-littoralis_Contig191:226327..226397Pylaiella littoralis U1_48CDSP-littoralis_Contig191 226328..226397 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig191.60.1

>prot_P-littoralis_Contig191.60.1 ID=prot_P-littoralis_Contig191.60.1|Name=mRNA_P-littoralis_Contig191.60.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=590bp
MLIPWALSTVAVYSIASVADSLSSPASLGFDARHGRIQASSTSSRLGARS
RVRCRRGIRTRGGGQPSAGGLHETRPLGWQQRQQQAWQRSALAVDGVEIG
TEEAEVAEGGWGEQNEDDNVSYARMLKFILPTLGIWLASPIMSLVDAGVV
GTRSAMELASLGPATVLCESLIYCSTFLAIATTNLQATALANGKRAEAQK
VVAQALGLALAIGLAVAVGVQVFGPTVLVHLAGEKSKEVVPAALVYSRVR
ILGAPASIAAMVLQAACLGARDSVTPLGIVLIASAINGLGDWVTVCRMGM
GVFGAAAATASAETVSMLLLGAAVWKAQGKRLYKFVALPSREELKTFLNF
AGPIAFALLGKVLCYSVMTLTVTAIGTIPLATHNVMLRVFFFFATFGEAL
SQTAQAFIPGQLAKERNMKEAKAAAKAAAVQAGTATAPEEVRVDPRLSPA
RTMMRKVLILGVGVGSLNACVAGLVPLHLSHLFTNSLEVAAGMRSLTPLL
SWSLLTHACVMGLEGILLARRRLQFLAGCYAINTVVLVTFMQWVRTWPAA
RGLHGAWMGLLILQTIRVAEFGTHLLWLNRRSRVGRQCD*
back to top

mRNA from alignment at P-littoralis_Contig191:219437..227149+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig191.60.1 ID=mRNA_P-littoralis_Contig191.60.1|Name=mRNA_P-littoralis_Contig191.60.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=7713bp|location=Sequence derived from alignment at P-littoralis_Contig191:219437..227149+ (Pylaiella littoralis U1_48)
CCGGTAGGCAGATGGACCAGCAGTTCCATCGCCTTCCAACACACCATATG AGATAAAGCACCAGCAGCCATGCTTATCCCGTGGGCGCTATCAACGGTAG CAGTATACTCTATAGCCTCTGTGGCAGATAGTTTATCTAGTCCAGCTTCT CTAGGATTCGACGCACGGCACGGTGAGCGTTAGCTGTTGGGTGCGTTGAC ACGTGCGTGGTATCGAGGGTAGTGTTCCTTATCATGTCACCGGTGCGATG CACACAACAGGCACATCCATCGTCATCCTACACACCTGCTGTGATACTTG ATACTGCGTACTCTCTAAAACGGTTCTCGTGGTGCTGCTATACCGCAATC TCTCCAAGATGTCTTATCACCTTGCGACTTGTCAGTGCGTGTCACGAGAG CGAGAGAAGCAGTGAGAGGTATTCGAGTACGCTTTATATATCATATCATA CCACCTTTTAACTTTTTTCACAGATGCTGCGCACGTGACATCATCCAGCA AGACCATAATTTGGCTACGATATTTCTCTGAATGACGAGCACCAAGTATC ACAGCAGCGGTTTTTTACTTTTAAAAACGTGTACAAGTACAAAAATAAAA AACGTGTATGTACCTAGTACACGAAACCGGAGAGAGCTGGGCGTCACGTG TAGGCACACACCTGCTGCTGTAGACACCGTGGAAGGCTGGCTGTCAGGTA TACATCTGCTGTCCGTACTGCTGCAATGATATCGCTGTGGGTAGCGGAGG ACTGAGATTTTCGTGGTACACGGCATGTTCCATATGATGGTACATACTTG TACTGCGTTGTATAATACGGCATCTAACCGTGCGATCTGCGCTTGCGACG AGACCGAGAGAAACGGCCATCAAACGGTGCTGCTGCCTTGTCGTGGTGTA TGCCACTTCACCGATATACCACATCATCATCATCATCAGCGGCAGCAGAG GCGGTGTTTACAGCAATGTTACCGGGGCTGCGTGCGTAGTTTTTCATGCT GCTTTTGCTCTGCAGTCGTTTGGCAGTGGCAAATGTCATTAGTAAGAGGC GGGATGTACTCTTTCCCGCATTTAGTATTCCAAGTATGTAATTGTACGAG AAAACCCCATGGCATGAAATGAGACGAAAGGATGTACATACAGCATTTCA TCTCATTTCATACCATGGGGTATGATGCTCACGGGTGTGTGATACATGAG GCACACAGACGTGTCTTGAACTGCTGTGCCGATGATTCTTTCGCCCTTGT CCTCTATCCCGAATCTCGAAAACCTGGCCGAATCTCGAAAACCTGGCGGA CAGCGGGCGGTCCATTGTAGATCCATGCTCAACAGGAGGGATCCGTTGAA CTTCCTGCTGTGTTGATATCTCTGGTGTTGACATATAAATATTATCTCAG TTTCCTACCCCCGCCCCCTCTCTTGAAAAAAAAAAAAGAACAGGCCGAAT ACAGGCGTCCTCCACATCCAGCCGCCTAGGAGCACGGTCAAGAGTTCGAT GCAGGAGAGGTATACGCACCCGTGGCGGTGGTCAGCCCTCCGCCGGTGGT TTACACGAGACACGACCATTAGGTTGGCAGCAGCGGCAGCAGCAGGCATG GCAACGGTCAGCCCTAGCCGTAGACGGGGTGGAGATTGGCACGGAGGAGG CTGAGGTCGCGGAGGGCGGGTGGGGGGAGCAGAACGAGGACGACAACGTG TCGTACGCCAGGATGCTGAAGTTTATATTGCCCACGCTGGGCATCTGGCT GGCGTCGCCGATCATGAGTCTCGTCGACGCTGGGGTGGTGGGTGAGTTTT TTTACTGCAGAAATGACGACAGGCAGACATCCCCGACCAAGGCTGCGCTC CGTGCGCTGTCGCAAGTGCCCGTGCGCGTTTTCCACGCCGTCGTACGTGC CGCTCTAGTTATTTTTGCTTGGTTACAGCAGTAGAAAATATTTTTTCGCA TTGTTTGTGCGGTTTCGCCGTCGCCTCTGCATCCCTTCTTTCATGTGCTG CAGTCTGGTGGGTATGTAGGCCGTAGGCCGTGTCCGAGCGCGTGATGGCA GTGGAATCTCGCTGTTGTTGTTTTCCAACACAGCAGTGAATCATCAAATG TATATGAGGGACAAGCAGCAGGAGGAAGTAGAGACGACAACCTCCGGAGT ACGGAGCGAAGTAGATGAAACTTAATCCATGCGTGATATACACGCCAGGC ATCACTGTCTCATTCCTCCGTCCTCGCTGTTCTTCTCCTTCAGGGTAGGG ACGAGAAACACTGCCCCTCAAATTCCGACATATGATACGACCAACGCCCC CCCCCGCCCCCTTTTTTTGATCGATCGGAGATGTAACCCAGTGCTCCCCC TTATCGATTCCTCTGACCGGCTACATGGCACGACCGAAAAGGCACGAGGA GTGCGATGGAGCTGGCGTCACTCGGCCCGGCCACGGTCCTCTGCGAGAGC TTAATATACTGCAGCACCTTCTTGGCCATCGCCACGACGAACCTTCAGGC CACTGCTCTGGCCAACGGTAAACGAGCAGAGGCCCAAAAGGTATGATGTT TTTTCAAGCTCAATTTGTTTTTTTATTTGCGTGGCACAGCGGTAGGTCGC TGATTCTCTTGGGCAAAAGAAAATTAATGCAGATAAATACAGCAGTAGTG CGGGCATGCTGGCGTGAGGTTGTTGGAGCGTTTTCGTCCGTCACGTCGCA ATTCTTTTCGAGAAAACCTACCTTTTGTATCGACCACTTCGGCCTCTCTG TTGGCTCATGCGGTTCCGACGCGTTTGCCCCGTCGTTGTGGTGCCACCTT GCCCCTTTTCCTCTTGAGGGTCGTCCACCGTAGTTTTTTCATTTTTGGTC AAAGCATTGGAACTGGATTTGAAACTGTCCGGGGTTGTCGAGCTAGGGCC GTCTCTCCTTTATGGGTGCTATTGGGACACACCCAGCAAGTGCTGACATG CAGGCAAGGGTGATAACACAGTCGGAAGTTACACTAGTAGTCGGAAGACT GAACTTTTTCAATCGCAGTACACCGACCACACCAACTTGTTAAAACGTCA TGCATTCGCTCTCTTGTACGTCATATCGCTGCCTCGCACGTCGCTGCGAC AGGTGGTGGCCCAGGCCCTAGGGTTGGCGCTGGCAATAGGACTGGCGGTG GCGGTGGGTGTTCAGGTGTTTGGACCGACAGTTCTGGTGCATCTCGCTGG GGAGAAGAGCAAGGAGGTATGATGAAGCATCTACGAAGTGTATATCTCAA CCAGCAAACACGGCCAAGCTTTGATGAGGACTTCCAGATAAAGCAATGGA GGGTGGGGATCGTGGTTCCCCTTCCCACCCACAAGTGTCCCAAACAACTC CCGGTATACCGTTCTAGCAGCTCGTCGCCAAATCCGCGGTACAACTTTGA AGGGGGCTCGAGGCAGAGCGCAAAGCAGGACCAGAACACCTTTACAACGG TATCACAATACGACGATGCGACGTTGACGCGCAGGTAGTACCAGCAGCTC TCGTGTACTCCAGAGTCCGGATCCTTGGCGCTCCTGCATCCATCGCGGCC ATGGTGCTGCAAGCCGCGTGTCTGGGCGCTAGGGACTCCGTTACCCCCCT CGGCATCGTGTTGATAGCCAGCGCTATAAACGGGCTCGGTGACTGGGTAA CCGTCTGTAGGATGGGCATGGGGGTGTTTGGAGCCGCTGCAGCTACTGCA TCTGCGGAGACCGTGAGCATGTTACTCCTGGGCGCTGCGGTGTGGAAGGC GCAGGGTGAGTGAGATGTGGGTTGTGGGAGCTGCACAGATTAGCATTTGC GGCGGTGGGACGAAGCGTTGGTCTTCACGGATGTTTGTGCCGCTTCTGCT GATGGCCGAAACCACAAAGATATGAATGGGATTCTACACGAAGTGCGCTG GTTGCACATGTTGTTACATACGCTCGCAACATCCGATGCGCAAGCGTATC GAAACATGGTGAGATGAAGGTGGGTAGCTGCTCTGCTTGGCTTTCTGCGT GCGACAGGTTTGCGACAGCAGTGGCATTTGTTTTTGCTCTGAATGGAAGG TTGACGCAGCACGAGAAATGCACTGTTTGCCACCCCACTACAAAGGTGAA AGCTGCTGCTACAGCGGTACCACCCGCGTTCCAAGGTTTTCCCAAGCATG CACAATCTCTACATGCACAAGCCGACGATTACACCGCCTGCTCGATGTTT TTACCTGCAGGACAGCATCGTAAAACCTAGCTAATACTGATCAACCTGTC CGGTACGCCTGCTTCCTGCAGGAAAGAGGTTGTACAAATTCGTGGCTCTA CCGTCTCGCGAAGAGCTTAAGACCTTTTTAAATTTCGCGGGCCCCATCGC CTTCGCATTGCTTGGGAAGGTGAATAAAAACCTGCTCATGTGGTGAAAAC CTTTTAAGTTTTACGCTCGAAGTCGAAAGTAGTTCCGTCCGGTTGGGATA GCGCGGGTTTGGGGAGGATGGAGGGCCGAGATCTGGATGGAACACATACA GTCAACAGTCCCGATTCAGATACATTTGAAGAGGTTTTTGCGTTGACGAA TTTTCGGGCTACACCGGGATTTCTTGCGAGTTGGGATGTAGAGTAACAAG CAGGATAAGTCGCATCTAATTCCGCACGGGAAAAGCTGCTCCGTGTAGTC GGTTTCATACCGTGTGCTTGAGTGCATTTTTGAGCGTGTTGTTGGTCTCG TGCTGCCTTTCAAGTAGATGCCATATTCACGTGTTGGCATTGTTTTGTGT TATGATATAATAGCATGGTTCACCTTGGGCTGGCGCCGGCTGTTCTTTTT CTTCCGACCTCCGCCGCTTGGTGCTCTCCTCATCAACAGGTGCTCTGCTA CTCCGTGATGACTCTTACGGTCACAGCAATAGGGACCATTCCGCTGGCGA CGCACAATGTGAGCAGAGATTGAATTGAATGCTCGATCGTCGCTGCCAAC TCTGCCGTGCCCGTTTGGTTACCACAAATTACCTCTTCCTGAAACGTCTA TTAGGCGAACAGGGATGCTGGAATGTCGCAGGTGCTGCTGCCCGAACGTG ATACACCACGTCGCGTGTGACCCCTTCGCCAGCTTTAGGACAGGCAGTAC ATTGCAGCCTAAATACCTCTCTTAGAGTAAGCGTCGCCACCCCGAGTACC ATTGCTGTGTCAGGGTTGGGTTGCCCTTTCAGTTTCATCTGCTTTTGGAT TTTGGCCGCGCAGCGCATCATGCACTGGTGTAAACGTCCAGTTCTACGCT CCAAAGTACCGTAGTTTACCCATGTTTTCCCCGCAATCGCTCCTCCACGG CTGCATCGTTTGAAATATGTTCGATGAAGAGGTGAAACATCTAGTACTTC GAAGTACAATATTTGTTCCTTTCTTTGAAAGTTAGTTTGAGATGTATCGA TCCGATGCATCCACTCTCTCCGGTCACCCGGTATTCGCCGACTCTCACGT GCGGTCATCAGGTGATGCTGCGAGTGTTTTTCTTCTTCGCTACCTTCGGA GAGGCCTTGTCCCAGACGGCTCAGGCGTTCATCCCCGGACAGCTCGCCAA AGAAAGGAACATGAAGGAGGCTAAGGCCGCCGCTAAGGCCGCCGCCGTTC AAGCGGGGACTGCAACCGCTCCCGAGGAAGTTCGAGTCGATCCAAGACTG AGCCCAGCACGAACAATGATGAGGTGAGGAGTAAATAGCAACGTGGCTCG CGTTAGCGCAAACGTGTAGTATCGTTTTATTTGGGTGCGGTGAGATGAGC TTCTTGCGGAATGCCCTACCTCCCGTTTGCGTCAATTAAACTGTACCCGA TACCCGGATACCCTGCTGCCGTGGCAGGAAAGTGCTTATCCTCGGCGTTG GAGTGGGCAGTCTCAACGCCTGCGTGGCGGGGCTGGTTCCTCTCCACCTC TCCCACCTCTTCACCAACTCCTTGGAAGTGGCAGCCGGGATGCGGAGCCT GACGCCGCTTCTGTCTTGGAGCCTTTTGACCCACGCCTGCGTTATGGGCC TGGAGGGAATCCTTCTTGCTCGACGGCGTCTACAGTTTCTCGCAGGGTGA GCTGGGTTGACCGGGTCGACTTTAATTACCCATTGTTTTGAATAGCAAAA ACCACACCTGCTACACATCACACCGCCTTACCAATAAATTATCCACTGGA CCCCCACGATTATGTGCGCTGAAGCTCAACATGAAACGTAAAGGCAACAC CATGCCCTGGTCAAATCATCGGGGTACGTGAGTTCGTTGAGCTACATCCT CGGTGCAGTTCCAACATGGGGCTCCGCGTATTTTCACAATTGAAACCAAT CGTGTCCCGACCCACTCGACCTCGTTTCTATCTAGGTGCTACGCCATCAA CACGGTGGTGTTGGTGACCTTCATGCAGTGGGTTAGGACATGGCCTGCCG CACGGGGTTTGCATGGGGCCTGGATGGGACTCTTAATTCTGCAGACAATC AGGCGAGCTTACCCCTCACGCGTCGGGCCGTCCATCGGTTGGATGGTGTT ATTTTCTAGGCTGAGCACATGCGACAAGGCCGCAGGCCGTTGTTAGCCGA GCTCGTTTGTTCTCCTGTTTGATTCGCAGGCTCCAAATTGGGGCCCGGCG TTTAAAGCAGTCGGGACGAAACCCGTAAGCCGTGGCTAGCCAGAGGAGGA GTATCCATTCGCAAATTTAATCGAGAACCTGAGACCAAGCGTCGGAATCG CACGGCAACGCCAGTACTACCTAACGTACCCTGTGGGCCCAGGGGCGCCC AAACTACCAGCACCTTTTTGCCGGCATTGACCCCGCCCCGCCCCCCCTCC GCTGCGCTGCCATCGCTCTTCCGTATTTCGTCGGGTGTGCATTTGCCGGG TACTCTCATGGATTGCGATGAACCTACTCACTTGTGTCCAGGGTGGCGGA GTTCGGGACACACCTTCTGTGGCTTAACCGAAGGAGTCGCGTCGGGCGAC AATGTGATTGAGGCCGCTGAATAGGAGAGGAATGCCCGCTCGTAATGTTT TTTGTCGAGATGTCGTCAAAGTAGTGCACTTCTACGTCTTGGAGTGCACG GCTAAACTTCGAAGGATCACACTAGTTCCTCTGCTTGCAGCAAGTGCGCC GATCAACCCTCTGATGATTCGTATCGACAATGTTTTCGATTCAAGTCTTG ATGCTGTTGACTGGCGAATGATTCGGGTAGTTTTGATTTGTTTTAGTGGC GACTCTGTTGACGTCCTTGAGGGTCTTCCTTTCATGTCCTACGGGACGAG CAGTTGAAACAAACATCTGGCACGGGACGGCTCTCTGTACCATATGCTTG TCCGCTGGTCTGATCCAAGGCTGTCCACGAGCCACAAGATATTTCATCCG ATCTGGTGTTCGATACCGATACATACGTAAGAACACGGAACGGGCTCAGT TCCCGAGGCTTGAGACTGGGGGTTTATGAAAGAGAACCCCGAAAGCACCC ACGTGTATGATCTCAAGAATAATATGACGGGACATCGTTTCGCAACTTGC ACTGGTTCTCCCTTAAGTGTTGGGTACCCACTCATTTTTCGTCGGTTTGA CGGAAGATGGCCGCAATGTATCATGTAAGATGGTATGGATCAGTAAGTAG GATCTCGATCAGCTGTGTGCCGAGATTCAAGTCTCCCTCTTACTCTGTAA CATATCGTGTGATATCGAAATACATGCATGCCAAAGCGTTTGGGTCTTCA CGACATATACAGG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig191:219437..227149+

>mRNA_P-littoralis_Contig191.60.1 ID=mRNA_P-littoralis_Contig191.60.1|Name=mRNA_P-littoralis_Contig191.60.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1770bp|location=Sequence derived from alignment at P-littoralis_Contig191:219437..227149+ (Pylaiella littoralis U1_48)
ATGCTTATCCCGTGGGCGCTATCAACGGTAGCAGTATACTCTATAGCCTC
TGTGGCAGATAGTTTATCTAGTCCAGCTTCTCTAGGATTCGACGCACGGC
ACGGCCGAATACAGGCGTCCTCCACATCCAGCCGCCTAGGAGCACGGTCA
AGAGTTCGATGCAGGAGAGGTATACGCACCCGTGGCGGTGGTCAGCCCTC
CGCCGGTGGTTTACACGAGACACGACCATTAGGTTGGCAGCAGCGGCAGC
AGCAGGCATGGCAACGGTCAGCCCTAGCCGTAGACGGGGTGGAGATTGGC
ACGGAGGAGGCTGAGGTCGCGGAGGGCGGGTGGGGGGAGCAGAACGAGGA
CGACAACGTGTCGTACGCCAGGATGCTGAAGTTTATATTGCCCACGCTGG
GCATCTGGCTGGCGTCGCCGATCATGAGTCTCGTCGACGCTGGGGTGGTG
GGCACGAGGAGTGCGATGGAGCTGGCGTCACTCGGCCCGGCCACGGTCCT
CTGCGAGAGCTTAATATACTGCAGCACCTTCTTGGCCATCGCCACGACGA
ACCTTCAGGCCACTGCTCTGGCCAACGGTAAACGAGCAGAGGCCCAAAAG
GTGGTGGCCCAGGCCCTAGGGTTGGCGCTGGCAATAGGACTGGCGGTGGC
GGTGGGTGTTCAGGTGTTTGGACCGACAGTTCTGGTGCATCTCGCTGGGG
AGAAGAGCAAGGAGGTAGTACCAGCAGCTCTCGTGTACTCCAGAGTCCGG
ATCCTTGGCGCTCCTGCATCCATCGCGGCCATGGTGCTGCAAGCCGCGTG
TCTGGGCGCTAGGGACTCCGTTACCCCCCTCGGCATCGTGTTGATAGCCA
GCGCTATAAACGGGCTCGGTGACTGGGTAACCGTCTGTAGGATGGGCATG
GGGGTGTTTGGAGCCGCTGCAGCTACTGCATCTGCGGAGACCGTGAGCAT
GTTACTCCTGGGCGCTGCGGTGTGGAAGGCGCAGGGAAAGAGGTTGTACA
AATTCGTGGCTCTACCGTCTCGCGAAGAGCTTAAGACCTTTTTAAATTTC
GCGGGCCCCATCGCCTTCGCATTGCTTGGGAAGGTGCTCTGCTACTCCGT
GATGACTCTTACGGTCACAGCAATAGGGACCATTCCGCTGGCGACGCACA
ATGTGATGCTGCGAGTGTTTTTCTTCTTCGCTACCTTCGGAGAGGCCTTG
TCCCAGACGGCTCAGGCGTTCATCCCCGGACAGCTCGCCAAAGAAAGGAA
CATGAAGGAGGCTAAGGCCGCCGCTAAGGCCGCCGCCGTTCAAGCGGGGA
CTGCAACCGCTCCCGAGGAAGTTCGAGTCGATCCAAGACTGAGCCCAGCA
CGAACAATGATGAGGAAAGTGCTTATCCTCGGCGTTGGAGTGGGCAGTCT
CAACGCCTGCGTGGCGGGGCTGGTTCCTCTCCACCTCTCCCACCTCTTCA
CCAACTCCTTGGAAGTGGCAGCCGGGATGCGGAGCCTGACGCCGCTTCTG
TCTTGGAGCCTTTTGACCCACGCCTGCGTTATGGGCCTGGAGGGAATCCT
TCTTGCTCGACGGCGTCTACAGTTTCTCGCAGGGTGCTACGCCATCAACA
CGGTGGTGTTGGTGACCTTCATGCAGTGGGTTAGGACATGGCCTGCCGCA
CGGGGTTTGCATGGGGCCTGGATGGGACTCTTAATTCTGCAGACAATCAG
GGTGGCGGAGTTCGGGACACACCTTCTGTGGCTTAACCGAAGGAGTCGCG
TCGGGCGACAATGTGATTGA
back to top