mRNA_P-littoralis_Contig191.53.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig191.53.2 vs. uniprot
Match: D7G811_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G811_ECTSI) HSP 1 Score: 1110 bits (2870), Expect = 0.000e+0 Identity = 704/1083 (65.00%), Postives = 820/1083 (75.72%), Query Frame = 1
Query: 241 MQFEPEESGEERRRRQRDYHAFLDAQVDARKKQPAEAQDDATDPAGN-WLPVLPLSARFKHQAG-APYRVDP-TTFARQTYKAPVVSNGGGVEIN-LDHRAEIANREEHFSLVGQRLEAEIQRRHLVERKLADLGQKLEMWMTASTASINSLGARDAVVTEVREQTRNLDTELAGIREWKNRVDASLALAPKVQEMTQQQVKALEEEARTRIQADEARSARFRQAVELVSSEVESLAHRLKADENGTRQRLAKVEAAFTGEAKGTSEATRQLGVQVQSLGSDVSESESKMSSLLQSLRMLEKRQQQEQQSVAAKAKTARDENVQSREKMNGLSAAVSGSEKKTSSLLEALWRLETRQREQRNSAFCLHNAITQ--LPPSAVQESLIAATTVKLDLLRTSLADELSGLMGDTAKRAVESTNVPQLMTALRGRVELAEERLNNMADKSFRALEEELTGVRSEVKRLGGRIDTGPIATGLKVLTANTATAQAAAQSQLTELQDALSAEITARRRNAVRLAEAQAATKEGGRESAVQATSGLRARCLELEELVARLTRDIQTAQEDLSSQTQTQLAATQERNSRAVGKLEESLAGVRVQLAQQGADEDRNSARVAARIDELEGLIAGNKDLLREAEERARNAFGAIEAK-------FIDKMAGIESEEMARIEAIELALRGQGHSLEEAIEADHRSNKKRSEEIXXXXXXXXXXXXXXXXXAQEEDSARVGSLLQQAQEQVNREIARVRQTTDRVATEANTFRDKLNAVETSCMEAAQDLHRDLSTSSEASQSRMRLWAEDRMRKERAAMQESFERTQQQGKMVRALLDETVQAVSKEVELLRAESRARDLALEDSLDERASELEVKLTEIDNGAAKKRRVAELTKETGARIGGVERRVRQAEQELKKDLEVKLAVSSLVCTIADNASTQRLEQGSSEVAQLEALREAGAMEREASLRAELGKTNALVAGLQADIGAARGWQTGVDNLELKLMAHIEDLKAMVEAAESAAAIQKAVTSANLVVXXXXXLA-LENATKRKAAETVSEQKAEAAKVSSAD--QGQLARKRPKKKAMDFAALNDELEAEE 3441
MQFEPEESGEERRRRQRDYHAFLDAQV+AR ++PA +DD TDPAGN LPVLPLSAR K+Q Y D T FAR K P V +G G + DHRAEIA REEH + + QRLE E+QRRHLVER LA LGQKLE WM+ ST S+ SLGARD VVT KVQEMTQQQVKALEEEARTRIQADE RS+RFRQAVE VS +VE+LA +L+A++NGT QR+AK EAAF GEAKG EAT+QL QVQ+L +DV+ SE KMSSLLQSLR +E RQ+ EQ SVAA+A+ A D Q RE++ LSAAVSGS+ K +SLL+AL LE RQ++Q + + NA + + +QESL+AAT+VKLDLLR+SLADELSG+MGD AKRAVESTNVPQLM ALRGRVE EERLNNMADKSFRA+E+EL+GVR+EV RL GRIDTGPIA GLKVL+ +T AQAA QSQLTELQDALSAEITARRRNAVRLAEAQAATKEGGRESAVQA SGLRARCLELEELVARLTRDI+TAQED+SSQTQTQLAA+QE NSRAVGKLEESLAG+R+Q+AQQ +D DRN ARV AR+DELEG+I NKDLLREAEERARN A+EAK F DK+AG+ESEEMARI+AIELA+ QG++L+EA E HR+NK+RS+EI AQE++S RV SLL QAQEQ+ R+K+ A ET+ ++ QDLHRDLS ++EAS SR RLWAED++RKERAAM+ES ERTQ Q M+R LLDE V+AVSKE+++LRAESR R+LALE+ LDERAS LE ++TEIDNG+AKKRRV ELT+ETGARIG VERRVRQAE+ELK++LEVKLAVSS+VC++AD ASTQRLEQ S EV +LE +R+AGAME EASL+AEL KTNA+VA L+ADIG AR WQTGVDNLE+KLMA IE+L+AM EAAESAAAI KA SA L ++ R E + + E V A QGQL +K KKAMDFAA+NDELEA+E
Sbjct: 1 MQFEPEESGEERRRRQRDYHAFLDAQVEARSRKPAP-EDDRTDPAGNPRLPVLPLSARLKYQPSPGSYGADSFTNFARPNGKGPAVGDGSGCGVRGTDHRAEIAIREEHVNRIEQRLEEEVQRRHLVERNLAALGQKLENWMSDSTVSLKSLGARDEVVT-------------------------------KVQEMTQQQVKALEEEARTRIQADETRSSRFRQAVERVSGDVENLARKLEAEDNGTLQRVAKFEAAFKGEAKGAREATKQLVAQVQALDADVAGSERKMSSLLQSLRQIESRQR-EQLSVAAEARKATDGTEQLREQVRTLSAAVSGSDSKMNSLLQALQALEKRQQDQHS----VGNARKEEKVSKQQIQESLMAATSVKLDLLRSSLADELSGMMGDIAKRAVESTNVPQLMAALRGRVEHTEERLNNMADKSFRAMEDELSGVRTEVTRLEGRIDTGPIAAGLKVLSVSTKEAQAATQSQLTELQDALSAEITARRRNAVRLAEAQAATKEGGRESAVQAASGLRARCLELEELVARLTRDIKTAQEDISSQTQTQLAASQEHNSRAVGKLEESLAGIRMQMAQQVSDGDRNIARVTARVDELEGVITTNKDLLREAEERARNGLAAMEAKRQEQAKQFADKIAGVESEEMARIQAIELAMAEQGNTLKEAFETGHRTNKRRSDEIYAEVKRLEGSLRTALADAQEDESERVNSLLHQAQEQI--------------------LREKITAEETARIDGVQDLHRDLSRATEASYSRTRLWAEDQLRKERAAMEESLERTQAQSGMIRTLLDEAVKAVSKELDILRAESRDRNLALEEVLDERASGLEERITEIDNGSAKKRRVNELTRETGARIGEVERRVRQAEKELKEELEVKLAVSSMVCSVADKASTQRLEQSSLEVVRLEEVRKAGAMENEASLKAELAKTNAVVASLKADIGVARAWQTGVDNLEVKLMARIEELRAMAEAAESAAAIAKADASAALEAEAKHTSEDTSSSVTRNDLEVKTLRGTEPLDVEGAAKAQGQLGKKGLTKKAMDFAAMNDELEADE 1026
BLAST of mRNA_P-littoralis_Contig191.53.2 vs. uniprot
Match: A0A6H5KVY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVY4_9PHAE) HSP 1 Score: 917 bits (2369), Expect = 6.840e-304 Identity = 623/1074 (58.01%), Postives = 725/1074 (67.50%), Query Frame = 1
Query: 241 MQFEPEESGEERRRRQRDYHAFLDAQVDARKKQPAEAQDDATDPAGN-WLPVLPLSARFKHQAGAP-YRVDPTT-FARQTYKAPVVSNGGGVEIN-LDHRAEIANREEHFSLVGQRLEAEIQRRHLVERKLADLGQKLEMWMTASTASINSLGARDAVVTEVREQTRNLDTELAGIREWKNRVDASLALAPKVQEMTQQQVKALEEEARTRIQADEARSARFRQAVELVSSEVESLAHRLKADENGTRQRLAKVE---------------------AAFTGEAKGTSEATRQLGVQVQSLGSDVSESESKMSSLLQSLRMLEKRQQQEQQSVAAKAKTARDENVQSREKMNGLSAAVSGSEKKTSSLLEALWRLETRQREQRNSAFCLHNAITQ--LPPSAVQESLIAATTVKLDLLRTSLADELSGLMGDTAKRAVESTNVPQLMTALRGRVELAEERLNNMADKSFRALEEELTGVRSEVKRLGGRIDTGPIATGLKVLTANTATAQAAAQSQLTELQ------------DALSAEITARRRNAVRLAEAQAATKEGGRESAVQATSGLRARCLELEELVARLTRDIQTAQEDLSSQTQTQLAATQERNSRAVGKLEESLAGVRVQLAQQGADEDRNSARVAARIDELEGLIAGNKDL------------------------LREAEERARNAFGAIEAK-------FIDKMAGIESEEMARIEAIELALRGQGHSLEEAIEADHRSNKKRSEEIXXXXXXXXXXXXXXXXXAQEEDSARVGSLLQQAQEQVNREIARVRQTTDRVATEANTFRDKLNAVETSCMEAAQDLHRDLSTSSEASQSRMRLWAEDRMRKERAAMQESFERTQQQGKMVRALLDETVQAVSKEVELLRAESRARDLALEDSLDERASELEVKLTEIDNGAAKKRRVAELTKETGARIGGVERRVRQAEQELKKDLEVKLAVSSLVCTIADNASTQRLEQGSSEVAQLEALREAGAMEREASLRAELGKTNALVAGLQADIGAARGWQTGVDNLELKLMAHIEDLKAMVEAAESAAAIQKAVTSANL 3252
MQFEPEESGEERRRRQRDYHAFLDAQV+AR ++ A +DD TDPAGN LPVLPLSAR K+Q Y D +T FA K PVV +G G + DHRAE+A REEHF+ + QRLE E+QRRHLVER LA LGQ+LE W++ STAS+ SLGARD VVT KVQEMTQQQVKALEEEARTRIQADE RS+RFRQAVE VS EVE+LA +L++++NGT QR+AK E A F GEAK EAT+QL QVQ+L DV+ SE KMSSLL+SLR +E RQ+ EQ SVAA+A+ A D Q REK+ LSAAVS S+ K +SLL+A LE RQ++Q + + NAI + + +QESL+AAT+VKL+LLR+SLADELSG+MGDTAKRAVESTNVPQLM ALRGRVE EERLNNM DKSFRA+E+EL+GV +E AA QSQLTELQ DALSAEITARRRNAVRLAEAQAATKEGGRESAVQA SGLRARCLELEELVARLTRDI+TAQED+SSQ +D DRN ARV AR+DELEG+I NKDL LREAEERARN A E+K F DK+A +ES EMARIEAIELA+ QG L+EA E HR+NK+RS+EI AQEE S RV LL QAQEQVN + R TT R+K+ A ET+ ++ +DLHRDLS ++EAS SR RLWAED++RKE AAM+ES ERTQ Q M+R LLDE V+AVSKE++LLR ESR R+LALE+ LDERAS LE +LTEIDNG+AKKRRV ELT+ETGARIG VERRVRQAE+ELK++LEVKLAVSS+VC++AD ASTQRLEQ S EV +LE + +AGAME EASL+AEL KTNA+VA L+ADIG AR WQTGVD+LE+KLMA IE+L+ M EAAESAAAI KA SA L
Sbjct: 1 MQFEPEESGEERRRRQRDYHAFLDAQVEARSRKSAP-EDDRTDPAGNPRLPVLPLSARLKYQPSPETYGTDSSTNFALPNGKGPVVGDGSGGRVRGTDHRAEVAIREEHFNRIEQRLEEEVQRRHLVERNLAALGQRLENWISDSTASLKSLGARDEVVT-------------------------------KVQEMTQQQVKALEEEARTRIQADETRSSRFRQAVERVSGEVENLARKLESEDNGTLQRVAKFEVRFKRRIGMSTLIPSCYGTTKAVFKGEAKSAREATKQLVAQVQALDDDVAGSERKMSSLLESLRQIESRQR-EQLSVAAEARKATDGTEQLREKVCALSAAVSRSDSKMNSLLQAHQALEKRQQDQHS----VGNAIKEENVSKQQLQESLMAATSVKLELLRSSLADELSGMMGDTAKRAVESTNVPQLMAALRGRVEHTEERLNNMVDKSFRAMEDELSGVHTE----------------------------AATQSQLTELQSYRLHVLTRRRKDALSAEITARRRNAVRLAEAQAATKEGGRESAVQAASGLRARCLELEELVARLTRDIKTAQEDISSQV---------------------------------SDGDRNIARVTARVDELEGVITINKDLVSECTLERDVSTPMFFAPYKEVEPLREAEERARNGLAATESKRQEQAKQFADKIASVESSEMARIEAIELAMTEQGDILKEAFETGHRTNKRRSDEIHAEVKRLEGSLRTELADAQEE-SERVNYLLHQAQEQVNASLLRPSNTTRTHPI----LREKITAEETARIDGVRDLHRDLSRATEASYSRTRLWAEDQLRKEHAAMEESLERTQAQSGMIRTLLDEAVKAVSKELDLLRVESRDRNLALEEVLDERASGLEERLTEIDNGSAKKRRVNELTRETGARIGEVERRVRQAERELKEELEVKLAVSSMVCSVADKASTQRLEQSSLEVVRLEEMHKAGAMESEASLKAELAKTNAVVASLKADIGVARAWQTGVDSLEVKLMARIEELRTMAEAAESAAAIAKADASAAL 971
BLAST of mRNA_P-littoralis_Contig191.53.2 vs. uniprot
Match: A0A836CJD2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJD2_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 8.350e-5 Identity = 48/171 (28.07%), Postives = 87/171 (50.88%), Query Frame = 1
Query: 1711 ELQDALSAEITARRRNAVRLAEAQAATKEGGRESAVQATSGLRARCLELEELVARLTRDIQTAQEDLSSQTQTQLAATQERNSRAVGKLEESLAGVRVQLAQQGADEDRNSARVAARIDELEGLIAGNKDLLREAEER----ARNAFGAIEAKFIDKMAGIESEEMARIEA 2211
EL+ L+AE ARRR +L +AQA +E + + Q G++ R EL+ + + + A+ L+ ++Q+A + ER++RAV ++E++ A QL+ A +++ AAR+D L + + EER AR A G +++ +++E R +A
Sbjct: 491 ELRAGLAAEAEARRRGIAQLGQAQAQLREAEKAAVAQTAFGMQRRFDELQAAIKAASGEANDARHMLAQTLKSQIAQSAERSARAVARVEDATAQHESQLSALAAQRQSDASTTAARLDTLAASADAFSEAVERCEERVKDWARGALGNVQSAIASLRHSLDAEGELREQA 661 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig191.53.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig191.53.2 >prot_P-littoralis_Contig191.53.2 ID=prot_P-littoralis_Contig191.53.2|Name=mRNA_P-littoralis_Contig191.53.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1472bp MQFEPEESGEERRRRQRDYHAFLDAQVDARKKQPAEAQDDATDPAGNWLPback to top mRNA from alignment at P-littoralis_Contig191:193288..211457- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig191.53.2 ID=mRNA_P-littoralis_Contig191.53.2|Name=mRNA_P-littoralis_Contig191.53.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=18170bp|location=Sequence derived from alignment at P-littoralis_Contig191:193288..211457- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig191:193288..211457- >mRNA_P-littoralis_Contig191.53.2 ID=mRNA_P-littoralis_Contig191.53.2|Name=mRNA_P-littoralis_Contig191.53.2|organism=Pylaiella littoralis U1_48|type=CDS|length=4416bp|location=Sequence derived from alignment at P-littoralis_Contig191:193288..211457- (Pylaiella littoralis U1_48)back to top |