mRNA_P-littoralis_Contig191.45.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig191.45.3 vs. uniprot
Match: D7G813_ECTSI (MATE efflux family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G813_ECTSI) HSP 1 Score: 867 bits (2241), Expect = 1.690e-302 Identity = 465/582 (79.90%), Postives = 499/582 (85.74%), Query Frame = 1
Query: 295 MPCRASGLILWIAWLATLKNDAQGLVTAPIWSFRGSAAAALRSGRPQTARRRPVNMVVASEDVGRVLPSPGGGDGKIGDNLGTKTQTLVRVRKRTRAKKKLNSAVEGVSKPHVFDREIFALALPTLGAVLIDPCLSLVDTGYVGRLGALSLAAIGPCAAAFNFVFVTASCALLVSTSVLVSEQRAMGDRAAIGRTLTLASGLAVSMGVLMAVLFYINSAGLLSIMGAPQEVMGLAVPYLRWRASAFPANLFLLVACGAFRGMGEPKAGLNNAIVVGVVNLVLDPLLMFGCGLGVTGAAMATAAAQWVGALVYARFMWTRREKLGLKGGASMPGWREVKQFLGAGGAMVFRQLCNVGAWTVMASAATRMGIIEVAAHQLMLSLWLVIAFVQESLGSSGQVLVAQYLGLARDCRKAAGLGSEAPWAGEAEKFRETARSIAKRVLTLSXXXXXXXAASSMAIFPALLAVVCQSAEVAALVSEAFPTILYAFPMCCVVWTWDSLFYGASDFVYNAKTVAVASTCGVIGSILSLRRGWGILGLWTSMTYVLFGVRMAAHVWRFNSRRGPFGPSAFLAESRLIAELDS 2040
MPCR + L L + L LK + Q V+AP WS+ GS A R +RR + MV+ASED V+P P D G + + VRKRTRAK+K+NSAVEGVSKPHVFD+EIFALALPTLGAVLIDPCLSLVDTGYVGRLGALSLAAIGPCAAAFNFVFVTASCALLVSTSVLVSEQRAM DRAAIGRTLTLASGLAVSMGV+MAVLFY+NSAGLLS+MGAPQEVM LAVPYLRWRASAFPANLFLLVACGAFRGMGEPKAGLNNAIVVGVVNLVLDP+LMF CGLGVTGAAMATAAAQWVGALVY ++MW RRE+LGL GG S+PG EVKQFLGAGGAMVFRQLCNVGAWTVMASAATRMGI+EVAAHQLMLSLWLVIAFVQESLGSSGQVLVAQYLGLARD KA+GL +A W G A + RETARSIAKRVLTLS AA S +FPALL+VVCQS EVAALVS+ FPTILYAFPMCCVVWTWDSLFYGASDFVYNAKTVAVAS CGV+GS+LSLRRGWG+LGLW SMTYVLFGVRMAAH+WRFNSRRGPFGPSAF+ ESR IAE S
Sbjct: 1 MPCRTTTLTLRLILLTFLKTNVQAFVSAPGWSYTGSTAWYRREFSASASRRPVLGMVMASEDASLVVP-PSPADDXXGTSASLPPAATL-VRKRTRAKQKINSAVEGVSKPHVFDKEIFALALPTLGAVLIDPCLSLVDTGYVGRLGALSLAAIGPCAAAFNFVFVTASCALLVSTSVLVSEQRAMNDRAAIGRTLTLASGLAVSMGVIMAVLFYVNSAGLLSLMGAPQEVMSLAVPYLRWRASAFPANLFLLVACGAFRGMGEPKAGLNNAIVVGVVNLVLDPVLMFSCGLGVTGAAMATAAAQWVGALVYTKYMWDRRERLGLAGGVSLPGLGEVKQFLGAGGAMVFRQLCNVGAWTVMASAATRMGILEVAAHQLMLSLWLVIAFVQESLGSSGQVLVAQYLGLARDSHKASGLDLKAAWDGAALESRETARSIAKRVLTLSLGLGFSLAACSRLVFPALLSVVCQSREVAALVSQVFPTILYAFPMCCVVWTWDSLFYGASDFVYNAKTVAVASLCGVVGSVLSLRRGWGVLGLWVSMTYVLFGVRMAAHLWRFNSRRGPFGPSAFMDESRRIAETAS 580
BLAST of mRNA_P-littoralis_Contig191.45.3 vs. uniprot
Match: A0A4D9CXB6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXB6_9STRA) HSP 1 Score: 453 bits (1165), Expect = 5.190e-143 Identity = 246/464 (53.02%), Postives = 319/464 (68.75%), Query Frame = 1
Query: 634 FDREIFALALPTLGAVLIDPCLSLVDTGYVGRLGALSLAAIGPCAAAFNFVFVTASCALLVSTSVLVSEQRAMGDRAAIGRTLTLASGLAVSMGVLMAVLFYINSAGLLSIMGAPQ-EVMGLAVPYLRWRASAFPANLFLLVACGAFRGMGEPKAGLNNAIVVGVVNLVLDPLLMFGCGLGVTGAAMATAAAQWVGALVYARFMWTRREKLGLK-GGASMPGWREVKQFLGAGGAMVFRQLCNVGAWTVMASAATRMGIIEVAAHQLMLSLWLVIAFVQESLGSSGQVLVAQYLGLARDCRKAAGLGSEAPWAGEAEKFRETARSIAKRVLTLSXXXXXXXAASSMAIFPALLAVVCQSAEVAALVSEAFPTILYAFPMCCVVWTWDSLFYGASDFVYNAKTVAVASTCGVIGSILSLRRGWGILGLWTSMTYVLFGVRMAAHVWRFNSRRGPFGPSAFLAESR 2019
+D +I+ LALPTLGAVLIDPCLSLVDT +VG+LG ++LA++GPC A +N +F TASC VST+VL++ +A+GD A GRTL A +V++G+ VL + L +MGA E++ L PYL WRA+A PAN+FLLVA GAFRG+G + N +VVG+VNLVLDP+LMF C LGV GAAMATA AQW+GAL Y M R+E GL G +PG +V++FL AG AM+FR LCNVGAWT+MAS ATRMG++E+AAHQL+LS+WLVIAFVQ+++G++GQVLV+Q LG R A G + AR+IAKRV++ S + + P+L+ + C S EV AL S P +L FP+CCVVWTWDS++YGASDF YNAK +AV+S+ V ++ SL WG+LGLW+SM +V FG+R+ AH RFNS GPFG S R
Sbjct: 49 YDGQIWELALPTLGAVLIDPCLSLVDTMFVGKLGHVALASMGPCTALYNMIFATASCMFSVSTAVLIARYKALGDGQATGRTLFTAITSSVALGIFFTVLMASRPSQALRLMGASSPEMIRLGAPYLLWRATALPANMFLLVAGGAFRGIGNARENFTNGLVVGLVNLVLDPVLMFSCNLGVAGAAMATAIAQWIGALSYIFKMTRRKEAFGLNLGWKIIPGMADVQEFLTAGTAMLFRSLCNVGAWTLMASIATRMGVVEIAAHQLILSMWLVIAFVQDAVGAAGQVLVSQQLGNPGSSRHAIRRG------------KARARAIAKRVISFSAIIGVALSLIGQIVLPSLIPLFCSSPEVIALTSSVLPIVLLGFPVCCVVWTWDSVYYGASDFKYNAKVIAVSSSIAVSLTLASLHYEWGLLGLWSSMVFVYFGLRVVAHYRRFNSEHGPFGKSTLSLNER 500
BLAST of mRNA_P-littoralis_Contig191.45.3 vs. uniprot
Match: W7U9X4_9STRA (Mate efflux family protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U9X4_9STRA) HSP 1 Score: 453 bits (1165), Expect = 7.860e-141 Identity = 246/464 (53.02%), Postives = 319/464 (68.75%), Query Frame = 1
Query: 634 FDREIFALALPTLGAVLIDPCLSLVDTGYVGRLGALSLAAIGPCAAAFNFVFVTASCALLVSTSVLVSEQRAMGDRAAIGRTLTLASGLAVSMGVLMAVLFYINSAGLLSIMGAPQ-EVMGLAVPYLRWRASAFPANLFLLVACGAFRGMGEPKAGLNNAIVVGVVNLVLDPLLMFGCGLGVTGAAMATAAAQWVGALVYARFMWTRREKLGLK-GGASMPGWREVKQFLGAGGAMVFRQLCNVGAWTVMASAATRMGIIEVAAHQLMLSLWLVIAFVQESLGSSGQVLVAQYLGLARDCRKAAGLGSEAPWAGEAEKFRETARSIAKRVLTLSXXXXXXXAASSMAIFPALLAVVCQSAEVAALVSEAFPTILYAFPMCCVVWTWDSLFYGASDFVYNAKTVAVASTCGVIGSILSLRRGWGILGLWTSMTYVLFGVRMAAHVWRFNSRRGPFGPSAFLAESR 2019
+D +I+ LALPTLGAVLIDPCLSLVDT +VG+LG ++LA++GPC A +N +F TASC VST+VL++ +A+GD A GRTL A +V++G+ VL + L +MGA E++ L PYL WRA+A PAN+FLLVA GAFRG+G + N +VVG+VNLVLDP+LMF C LGV GAAMATA AQW+GAL Y M R+E GL G +PG +V++FL AG AM+FR LCNVGAWT+MAS ATRMG++E+AAHQL+LS+WLVIAFVQ+++G++GQVLV+Q LG R A G + AR+IAKRV++ S + + P+L+ + C S EV AL S P +L FP+CCVVWTWDS++YGASDF YNAK +AV+S+ V ++ SL WG+LGLW+SM +V FG+R+ AH RFNS GPFG S R
Sbjct: 208 YDGQIWELALPTLGAVLIDPCLSLVDTMFVGKLGHVALASMGPCTALYNMIFATASCMFSVSTAVLIARYKALGDGQATGRTLFTAITSSVALGIFFTVLMASRPSQALRLMGASSPEMIRLGAPYLLWRATALPANMFLLVAGGAFRGIGNARENFTNGLVVGLVNLVLDPVLMFSCNLGVAGAAMATAIAQWIGALSYIFKMTRRKEAFGLNLGWKIIPGMADVQEFLTAGTAMLFRSLCNVGAWTLMASIATRMGVVEIAAHQLILSMWLVIAFVQDAVGAAGQVLVSQQLGNPGSSRHAIRRG------------KARARAIAKRVISFSAIIGVALSLIGQIVLPSLIPLFCSSPEVIALTSSVLPIVLLGFPVCCVVWTWDSVYYGASDFKYNAKVIAVSSSIAVSLTLASLHYEWGLLGLWSSMVFVYFGLRVVAHYRRFNSEHGPFGKSTLSLNER 659
BLAST of mRNA_P-littoralis_Contig191.45.3 vs. uniprot
Match: A0A5J4Z3T9_PORPP (Protein DETOXIFICATION 44, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z3T9_PORPP) HSP 1 Score: 246 bits (629), Expect = 1.360e-67 Identity = 164/459 (35.73%), Postives = 253/459 (55.12%), Query Frame = 1
Query: 634 FDREIFALALPTLGAVLIDPCLSLVDTGYVGRLGALSLAAIGPCAAAFNFVFVTASCALLVSTSVLVSEQRAMGDRAAIGRTLTLASGLAVSMGVLMAVLFYINSAGLLSIMGAPQEVMGLAVPYLRWRASAFPANLFLLVACGAFRGMGEPKAGLNNAIVVGVVNLVLDPLLMFG-CGLGVTGAAMATAAAQWVGALVYARFMWTRREKLGLKGG--ASMPGWR-EVKQFLGAGGAMVFRQLCNVGAWTVMASAATRMGIIEVAAHQLMLSLWLVIAFVQESLGSSGQVLVAQYLGLARDCRKAAGLGSEAPWAGEAEKFRETARSIAKRVLTLSXXXXXXXAASSMAIFPALLAVVCQSAEVAALVSEAFPTILYAFPMCCVVWTWDSLFYGASDFVYNAKTVAVASTCGVIGSILSLRRGW--GILGLWTSMTYVLFGVRMAAHVWR-FNSRRGPF 1989
FD E+++LA+P LG++L+DP L+LVDT VGRLG LAA+GPC+A +F+F T +S ++LV+ A D + R + L++ +A+ MG ++A+L ++ + LLS MGA + ++G A+ Y R R A P LL GA RG+ + ++++G++NLVLDPLLMFG +G+ GAA+AT+ AQ GA+ Y + R + GL A P R EV F+ + A++ RQ+ N+G WT M+S TRMG+IE+A+HQL+LS +L + F+ E L +GQ+L ++L + TAR+ R++ +S A + P L ++ A+V +L FPM C+VW +DS Y ASDF +NA ++ VA C +++ R +W + F +R+ AHV+R + SR PF
Sbjct: 41 FDDEVWSLAVPALGSLLVDPFLTLVDTACVGRLGLRPLAAMGPCSALTSFIFATFQPMYTISPALLVTRASAKKDLPGVARAVRLSASVALGMGTILALLSFVFARPLLSAMGATELIIGDALAYFRARIVALPFMFLLLCLDGAHRGVQDTVTPFRISMLIGIINLVLDPLLMFGPLKMGLRGAAIATSIAQICGAIAYVVDVLRRPDTFGLHAAQTAQAPIKRSEVMAFMQSSWALLVRQVSNLGVWTFMSSLITRMGLIEIASHQLVLSTFLFLTFLHEPLSVAGQILCTKHL--------------------VEDTSHATARAFIPRLVAISLALSSAIAVVAQFAMPKWLQIMATDAQVQLKALSVMRMLLCVFPMFCLVWLYDSFSYAASDFSFNALSLLVAGACTAPIALMLARSSQYASAHAMWFVLFCPYFTIRLVAHVFRTYISRSSPF 479
BLAST of mRNA_P-littoralis_Contig191.45.3 vs. uniprot
Match: D7CWB4_TRURR (MATE efflux family protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) TaxID=649638 RepID=D7CWB4_TRURR) HSP 1 Score: 241 bits (616), Expect = 1.860e-66 Identity = 159/445 (35.73%), Postives = 234/445 (52.58%), Query Frame = 1
Query: 634 FDREIFALALPTLGAVLIDPCLSLVDTGYVGRLGALSLAAIGPCAAAFNFVFVTASCALLVSTSVLVSEQRAMGDRAAIGRTLTLASGLAVSMGVLMAVLFYINSAGLLSIMGAPQEVMGLAVPYLRWRASAFPANLFLLVACGAFRGMGEPKAGLNNAIVVGVVNLVLDPLLMFGCGLGVTGAAMATAAAQWVGALVYARFMWTRREKLGLKGGASMPGWREVKQFLGAGGAMVFRQLCNVGAWTVMASAATRMGIIEVAAHQLMLSLWLVIAFVQESLGSSGQVLVAQYLGLARDCRKAAGLGSEAPWAGEAEKFRETARSIAKRVLTLSXXXXXXXAASSMAIFPALLAVVCQSAEVAALVSEAFPTILYAFPMCCVVWTWDSLFYGASDFVYNAKTVAVASTCGVIGSILSLRRGWGILGLWTSMTYVLFGVRMAAHVWRF 1968
+DR+I ALALP LG + DP +SLVDT +VGRLG++ LAA+G A F+ FV + L T+ +V+ GDR A GR + A LA+ G L + +A LL +MGA +E++G A+ YLR RA A PA L + GAFRG + + + + +VN+ LDPL +FG G G+ GAA AT AQW GAL + ++ RR LG+ ++P + E++ F+ G ++ R + T+ + ATR+G++EVAAHQ+ LWL +A V ++L + Q LVA+Y G + R AR++A R+L AA P L + V V FP + P+ +V+ WD + G DF Y A + V++ CG + +L L GWG+ G+W + L GVR+ WR+
Sbjct: 10 YDRDILALALPALGTLAADPLVSLVDTAFVGRLGSVPLAALGVNTALFSLAFVVFNF-LAYGTTPMVARSLGRGDREAAGRAVVQALTLALLAGGLAVAFLQLFAAPLLRLMGAGEELVGPALGYLRVRALAGPALLLITAGNGAFRGYQDTRTPFLLTLGLNLVNVALDPLFIFGFGWGLAGAAWATVVAQWAGALGFVWVLFARRRALGIS--VALPRFAELRPFVRVGWELLVRTAALLSTLTLATAVATRVGVLEVAAHQVAAQLWLFLALVVDALAVAAQALVARYRGAGQPLR---------------------ARAVADRLLAWGFGVGLVLAAGFALFAPVLPRLFTDDPAVVRAVLTVFPFVALMQPLNALVFVWDGVLMGLEDFRYLALAMLVSAACGALVLLLVLPLGWGLTGVWWGVA-TLMGVRLVTLSWRY 429
BLAST of mRNA_P-littoralis_Contig191.45.3 vs. uniprot
Match: A0A6C1NP02_9BACT (MATE family efflux transporter n=1 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A6C1NP02_9BACT) HSP 1 Score: 234 bits (598), Expect = 6.330e-64 Identity = 163/455 (35.82%), Postives = 235/455 (51.65%), Query Frame = 1
Query: 634 FDREIFALALPTLGAVLIDPCLSLVDTGYVGRLGALSLAAIGPCAAAFNFVFVTASCALLVSTSVLVSEQRAMGDRAAIGRTLTLASGLAVSMGVLMAVLFYINSAGLLSIMGAPQEVMGLAVPYLRWRASAFPANLFLLVACGAFRGMGEPKAGLNNAIVVGVVNLVLDPLLMFGCGLGVTGAAMATAAAQWVGALVYARFMW-TRREKLGLKGGASMPGW---REVKQFLGAGGAMVFRQLCNVGAWTVMASAATRMGIIEVAAHQLMLSLWLVIAFVQESLGSSGQVLVAQYLGLARDCRKAAGLGSEAPWAGEAEKFRETARSIAKRVLTLSXXXXXXXAASSMAIFPALLAVVCQSAEVAALVSEAFPTILYAFPMCCVVWTWDSLFYGASDFVYNAKTVAVASTCGVIGSILSLRRGWGILGLWTSMTYVLFGVRMAAHVWRFNSRRGP 1986
FDREI ALA+P LGA+ DP +S+VDT +VGRLG + LAA+G A+ F FV + L T+ V+ GDR +GR + A LAV+ GV+ L + +LS+MGA E+ A+ YLR RA A PA L ++ G FRG+ + + L + + VVNLVLDP+L+FG G G+ GAA AT AQW GAL + R ++ RR LG P W E+ FL GG ++ R +G T+ + ATR+G +VAAHQ+ + LW+++A V +SL + Q +V +Y G A E+ + R + R+L P L + V+ P +++ P+ +V+ WD +F GA DF Y A + +++ +L L GWG+ G+W +T L GVR A R+ RRGP
Sbjct: 12 FDREITALAIPALGALAADPLVSMVDTAFVGRLGTVPLAALGVNASVFAMTFVVFNF-LAYGTTPRVARALGRGDRGEVGRVVLQALVLAVAAGVVATALLLALAGPILSVMGATGELREPAMAYLRIRALAGPAVLLIMAGHGVFRGLQDTRTPLRITLALNVVNLVLDPILIFGLGWGLEGAAWATVVAQWAGALAFVRLIFGPRRAMLG-----ESPRWPRPAELLPFLRVGGELLLRTGALIGTLTLATAVATRVGTAQVAAHQVAVQLWMLLALVVDSLAVAAQAMVGKYRG-----------------ADESREGVAVLREVTNRLLLWGAGVGVVLLGLFWVAAPWLPRIFTDDPLTLLAVAAVLPFVVFMQPLNALVFVWDGIFMGAEDFRYLAVQMVLSALAAAGILLLVLPMGWGLAGVWWGIT-ALMGVRAATLAVRYWGRRGP 442
BLAST of mRNA_P-littoralis_Contig191.45.3 vs. uniprot
Match: A0A651HEU5_9BACT (MATE family efflux transporter n=1 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A651HEU5_9BACT) HSP 1 Score: 225 bits (573), Expect = 1.250e-60 Identity = 160/454 (35.24%), Postives = 232/454 (51.10%), Query Frame = 1
Query: 637 DREIFALALPTLGAVLIDPCLSLVDTGYVGRLGALSLAAIGPCAAAFNFVFVTASCALLVSTSVLVSEQRAMGDRAAIGRTLTLASGLAVSMGVLMAVLFYINSAGLLSIMGAPQEVMGLAVPYLRWRASAFPANLFLLVACGAFRGMGEPKAGLNNAIVVGVVNLVLDPLLMFGCGLGVTGAAMATAAAQWVGALVYARFMWT----RREKLGLKGGASMPGWREVKQFLGAGGAMVFRQLCNVGAWTVMASAATRMGIIEVAAHQLMLSLWLVIAFVQESLGSSGQVLVAQYLGLARDCRKAAGLGSEAPWAGEAEKFRETARSIAKRVLTLSXXXXXXXAASSMAIFPALLAVVCQSAEVAALVSEAFPTILYAFPMCCVVWTWDSLFYGASDFVYNAKTVAVASTCGVIGSILSLRRGWGILGLWTSMTYVLFGVRMAAHVWRFNSRRGP 1986
DREI ALALP LGA+ DP ++LVDT YVGRLG + LAA+G AA F+ FV + L T+ V+ GDR GR + A LAV GV + + L+ +MGA E+ G A+ YLR RA A PA L ++ G FRG + + + + VVNLVLDP+L+FG G G+TGAA AT AQWVGA+ F+W RR+ LG G + +P E+ FL GG ++ R L +G T+ A+ ATR+G EVA HQ+ + LW+++A V +++ + Q LV ++ G R R + R+L + + P L + V+ P +++ P+ +V+ WD +F GA DF + A + ++ + +L L GWG+ G+W + L GVR+ R+ R GP
Sbjct: 7 DREIVALALPALGALAADPLVTLVDTAYVGRLGTVPLAALGVNAALFSLAFVVFNF-LAYGTTPRVARAVGRGDRTEAGRVVLQALTLAVVTGVAATTILLMGGDLLVRLMGATGELRGPALDYLRIRALAGPAVLLIMAGHGIFRGFQDTRTPFRVTLGLNVVNLVLDPILIFGLGWGLTGAAWATVVAQWVGAV---GFLWLILGPRRDLLG--GVSRLPRPAELLPFLRVGGELLIRTLALIGTLTLAAAVATRVGTAEVAGHQVAVQLWILLALVVDAVAVAAQALVGRFRGEGRV---------------------HLLRRVTDRLLLWGLAMGLVLTLLFLLLAPLLPRLFTDDGATLREVARILPFVIWMQPLNALVFVWDGIFMGAEDFRFLAGQMLLSGAAAAMVLLLVLPMGWGLQGVWWGIV-TLMGVRLLTLSIRYWGRHGP 432
BLAST of mRNA_P-littoralis_Contig191.45.3 vs. uniprot
Match: A0A7Y2HRG9_9BACT (MATE family efflux transporter n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7Y2HRG9_9BACT) HSP 1 Score: 219 bits (559), Expect = 5.880e-59 Identity = 160/448 (35.71%), Postives = 231/448 (51.56%), Query Frame = 1
Query: 637 DREIFALALPTLGAVLIDPCLSLVDTGYVGRLGALSLAAIGPCAAAFNFVFVTASCALLVSTSVLVSEQRAMGDRAAIGRTLTLASGLAVSMGVLMAVLFYINSAGLLSIMGAPQEVMGLAVPYLRWRASAFPANLFLLVACGAFRGMGEPKAGLNNAIVVGVVNLVLDPLLMFGCGLGVTGAAMATAAAQWVGALVYARF-MWTRREKLGLKGGASMPGWREVKQFLGAGGAMVFRQLCNVGAWTVMASAATRMGIIEVAAHQLMLSLWLVIAFVQESLGSSGQVLVAQYLGLARDCRKAAGLGSEAPWAGEAEKFRETARSIAKRVLTLSXXXXXXXAASSMAIFPALLAVVCQSAEVAALVSEAFPTILYAFPMCCVVWTWDSLFYGASDFVYNAKTVAVASTCGVIGSILSLRRGWGILGLWTSMTYVLFGVRMAAHVWRFNSR 1977
D I ALALP LGA+ DP +S+VDT +VGRLG + LAA+G + F FV + L T+ LV+ GDR A G A L + G+ VL + + +L+ MGA E+ A+ YLR RA A PA L + G FRG + + L + + VNLVLDPLL+FG G G+ GAA+AT AQWVGAL + R + TRRE LG++ P ++ GGA++ R L +G T+ + ATRMG++ VAAHQ+ + LWL++A V ++L +GQ ++ EAP RE AR IA+R+L + A S P L + E + V E P I++ P+ V+ WD +F GA F Y A + ++S +LS+ GWG+ G+W ++ ++ + +W R
Sbjct: 2 DGRIVALALPALGALAADPLVSIVDTAFVGRLGVVPLAALGVNTSVFALAFVVFNF-LAYGTTPLVARAVGRGDREAAGDLALHALTLGLVAGIGALVLLQLLAEPVLAAMGASGELRAPALTYLRIRACAGPAVLLVTAGHGIFRGWQDTRTPLIVTLGLNAVNLVLDPLLIFGFGWGLAGAAIATVIAQWVGALWFLRLILGTRREALGVR--LHRPRLADLVPLGRVGGALLIRTLSLIGTMTLATATATRMGVLAVAAHQVAMQLWLLLALVVDALAVAGQAMIG-----------------EAP--------REEARRIARRLLLWAAGVGAVLALSFAVGRPWLPRIFTDDPEAISRVDELLPFIIFMQPLNAFVFVWDGIFMGAGAFRYLAVQMVLSSAVAAALLLLSVPLGWGLPGVWWAIVALMATRAVTLGLWHARGR 421
BLAST of mRNA_P-littoralis_Contig191.45.3 vs. uniprot
Match: A0A7Y2YUF7_9BACT (MATE family efflux transporter n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7Y2YUF7_9BACT) HSP 1 Score: 216 bits (550), Expect = 1.400e-57 Identity = 152/426 (35.68%), Postives = 227/426 (53.29%), Query Frame = 1
Query: 637 DREIFALALPTLGAVLIDPCLSLVDTGYVGRLGALSLAAIGPCAAAFNFVFVTASCALLVSTSVLVSEQRAMGDRAAIGRTLTLASGLAVSMGVLMAVLFYINSAGLLSIMGAPQEVMGLAVPYLRWRASAFPANLFLLVACGAFRGMGEPKAGLNNAIVVGVVNLVLDPLLMFGCGLGVTGAAMATAAAQWVGALVYARFMW-TRREKLGLKGGASMPGWREVKQFLGAGGAMVFRQLCNVGAWTVMASAATRMGIIEVAAHQLMLSLWLVIAFVQESLGSSGQVLVAQYLGLARDCRKAAGLGSEAPWAGEAEKFRETARSIAKRVLTLSXXXXXXXAASSMAIFPALLAVVCQSAEVAALVSEAFPTILYAFPMCCVVWTWDSLFYGASDFVYNAKTVAVASTCGVIGSILSLRRGWGILGLW 1911
DR+I LALP LGA+ DP +S+VDT +VGRLG + LAA+G + F FV + L T+ LV+ DR G + A LA +G + +L + + ++++MGA E+ A+ YLR RA A PA LF+ GAFRG + + L + + ++N+VLDPL +FG G G+ GAA+AT AQWVGA + R + +RR +LG++ +P E++ FL GG +VFR L +G T+ + ATR+G ++VAAHQ+ +WL++A V +SL + Q +VA Y G AG+ AR + R+L + P L + A V V+ FP I++ P+ +V+ WD +F GA F + A +A A+ C +L L GWG+ G+W
Sbjct: 10 DRDIVRLALPALGALAADPLVSMVDTIFVGRLGIVPLAALGVNTSIFAMAFVAFNF-LAYGTTPLVARAVGREDRVGAGDVVMQAFLLAAVVGGVATLLLELLAVPIVNLMGAGPELQEPALSYLRIRALAGPAVLFVTAGHGAFRGYQDTRTPLLVTLGLNLINVVLDPLFIFGFGWGLEGAALATLIAQWVGAAWFLRLLLGSRRRELGIR--RRLPALAELRPFLRIGGELVFRTLALIGTLTLATAVATRVGTLQVAAHQVATQIWLLLAMVVDSLAVAAQAMVAGYRG-----------------AGDPVM----ARRASNRLLGWGLLSGCGLGGLFFLLAPVLPRLFTDEAAVLEAVAGIFPFIVFMQPLNAIVFVWDGVFMGAERFRFLAGQMAFAAACAAAVLVLVLPMGWGLSGVW 411
BLAST of mRNA_P-littoralis_Contig191.45.3 vs. uniprot
Match: A0A520PPV2_9DELT (MATE family efflux transporter n=1 Tax=Sandaracinaceae bacterium TaxID=2510337 RepID=A0A520PPV2_9DELT) HSP 1 Score: 214 bits (545), Expect = 5.400e-57 Identity = 157/448 (35.04%), Postives = 232/448 (51.79%), Query Frame = 1
Query: 652 ALALPTLGAVLIDPCLSLVDTGYVGRLGALSLAAIGPCAAAFNFVFVTASCALLVSTSVLVSEQRAMGDRAAIGRTLTLASGLAVSMGVLMAVLFYINSAGLLSIMGAPQEVMGLAVPYLRWRASAFPANLFLLVACGAFRGMGEPKAGLNNAIVVGVVNLVLDPLLMFGCGLGVTGAAMATAAAQWVGALVYARFMWTR-REKLGLKGGASMPGWREVKQFLGAGGAMVFRQLCNVGAWTVMASAATRMGIIEVAAHQLMLSLWLVIAFVQESLGSSGQVLVAQYLGLARDCRKAAGLGSEAPWAGEAEKFRETARSIAKRVLTLSXXXXXXXAASSMAIFPALLAVVCQSAEVAALVSEAFPTILYAFPMCCVVWTWDSLFYGASDFVYNAKTVAVAS--TCGVIGSILSLRRGWGILGLWTSMTYVLFGVRMAAHVWRFNSRRGP 1986
+LA+P LGA+ DP +SLVDT +VGRLG L A+G CA+ F F + L T+ LV++ GDR+A R A LAV GV A++ + + +LS+MGA E+ A+ YLR RA A PA L + V G FRG + + L + + +VNL LDPLL+FG G G+ GAA AT AQW GALV+ + R RE LG++ + P +V GGA+ R L + +T + A R+G ++VAAHQ+ +WL ++ V ++L +GQ LV LG R AR +A +L AA + L + A+V A V++ + ++ + P+ +V+ WD LF GA DF + A + V++ CG++ +L + GWG+ G+W +M +L R WR+ GP
Sbjct: 9 SLAIPALGALAADPLVSLVDTAFVGRLGPAQLGALGVCASVFGLAFFVFNF-LATGTTPLVADAVGRGDRSAASRVTMSALSLAVVAGVGAALVLELAAEPILSLMGASGELRAPALAYLRVRALAAPAVLLVTVGHGVFRGYHDTRTPLWVTLGLNLVNLALDPLLIFGLGWGIAGAAWATTLAQWAGALVFVWLLLFRARETLGIE--RAWPRLADVTHLARVGGALALRTLSLLLVFTYATAVAARLGTLDVAAHQVAAQIWLFLSLVVDALAVAGQALVGSALG---------------------RGDRAEARHVANMLLRWGLGLGLALAALFALLAHPLPRLFTDEADVIARVADVYVFVVVSQPIGALVFVWDGLFQGAQDFRFLAVQMIVSALTACGILALVLPM--GWGLDGVWWAMLALLVA-RALTLGWRYWLGGGP 429 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig191.45.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig191.45.3 >prot_P-littoralis_Contig191.45.3 ID=prot_P-littoralis_Contig191.45.3|Name=mRNA_P-littoralis_Contig191.45.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=596bp MPCRASGLILWIAWLATLKNDAQGLVTAPIWSFRGSAAAALRSGRPQTARback to top mRNA from alignment at P-littoralis_Contig191:175737..187621- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig191.45.3 ID=mRNA_P-littoralis_Contig191.45.3|Name=mRNA_P-littoralis_Contig191.45.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=11885bp|location=Sequence derived from alignment at P-littoralis_Contig191:175737..187621- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig191:175737..187621- >mRNA_P-littoralis_Contig191.45.3 ID=mRNA_P-littoralis_Contig191.45.3|Name=mRNA_P-littoralis_Contig191.45.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1788bp|location=Sequence derived from alignment at P-littoralis_Contig191:175737..187621- (Pylaiella littoralis U1_48)back to top |