prot_P-littoralis_Contig191.34.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig191.34.1
Unique Nameprot_P-littoralis_Contig191.34.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length85
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig191.34.1 vs. uniprot
Match: A0A6H5K201_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K201_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 3.590e-9
Identity = 43/64 (67.19%), Postives = 47/64 (73.44%), Query Frame = 0 
Query:   22 INSRKEDLLDYLDEYVGGFRCDSGEGAGPNVTDIGLGGGRXXXXXXXXLGESNTSTGGGEMASA 85
            +NSRK DLLDYL+ +V GFR +   GAGPNVT  GL    XXXXXXXX GE NT TG GEMASA
Sbjct:  449 VNSRKADLLDYLETFVCGFRQEPVGGAGPNVTGTGLXXXXXXXXXXXXAGEGNTLTGSGEMASA 512
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig191.34.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K201_9PHAE3.590e-967.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..85
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig191contigP-littoralis_Contig191:137696..137950 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig191.34.1mRNA_P-littoralis_Contig191.34.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig191 137696..137974 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig191.34.1 ID=prot_P-littoralis_Contig191.34.1|Name=mRNA_P-littoralis_Contig191.34.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=85bp
MHHKTTCRAQKCRGDSEGHYNINSRKEDLLDYLDEYVGGFRCDSGEGAGP
NVTDIGLGGGRGGGRGGENLGESNTSTGGGEMASA
back to top