prot_P-littoralis_Contig190.125.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig190.125.1
Unique Nameprot_P-littoralis_Contig190.125.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length206
Homology
BLAST of mRNA_P-littoralis_Contig190.125.1 vs. uniprot
Match: A0A6H5KNH6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH6_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 1.050e-27
Identity = 78/214 (36.45%), Postives = 124/214 (57.94%), Query Frame = 0
Query:    3 CAAGELCHLSDRNITPE------LSCCGPRGGRLHRICGEIQNPGGDEEVNRICQSCAAANESASSTNTRTNTHSNAAKRTEGGGILQQSAPKKRKGEK-----RNRLTLGQKREILQLLDQKVSRTEIMRRFNCGRSTVGDIRKDRATLQENAASTSWSETSKSRKGGDFPKVDSLVMTMIEDARKLRIPVTGATIEAYGVAAKKKLVAEAST 205
            CA  ELC L +R +  +      L C    GGRLH ICGE +  GG +E++R+C  C A  +    ++ +    S  ++    G   +++ P  +   K     R RL  GQ+ E+L+LLD+K +  EI RR++   S +  I+  R  L++ AA+ + S TSKS + GDFP+++  V+ +IE+AR++ +P+T ATIE++G+A + KLVA  ST
Sbjct:    4 CADQELCKLPNRPLGEKDGHECRLGC----GGRLHGICGEPEEEGG-QEIHRVCNPCIAKKQKTPGSSKQPKRASPESELAGDGAAAKKTKPAGKAAGKAGKSTRTRLNFGQQLEVLKLLDEKTTYAEIARRYSISTSAISLIKGKRQQLEQAAATNARSTTSKSSRRGDFPELEKDVLALIEEARRVPLPITRATIESFGIAVRDKLVAAPST 212          
BLAST of mRNA_P-littoralis_Contig190.125.1 vs. uniprot
Match: A0A6H5L4Y6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y6_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 3.350e-27
Identity = 74/208 (35.58%), Postives = 120/208 (57.69%), Query Frame = 0
Query:    3 CAAGELCHLSDRNITPE------LSCCGPRGGRLHRICGEIQNPGGDEEVNRICQSCAAANESASSTNTRTNTHSNAAKRTEGGGILQQSAPKKRKGEK-----RNRLTLGQKREILQLLDQKVSRTEIMRRFNCGRSTVGDIRKDRATLQENAASTSWSETSKSRKGGDFPKVDSLVMTMIEDARKLRIPVTGATIEAYGVAAKKKL 199
            CA  ELC L +R +  +      L C    GGRLH ICGE +  GG +E++R+C  C A  +    ++ +    S  ++    G   +++ P  +   K     R RL  GQ+ E+L+LLD+K +  EI RR++   S +  I+  R  L++ AA+ + S TSKS + GDFP+++  V+ +IE+AR++ +P+T ATIE++G+A + KL
Sbjct:    4 CADQELCKLPNRPLGEKDGHECRLGC----GGRLHGICGEPEEEGG-QEIHRVCNPCIAKKQKTPGSSKQPKRASPESELAGDGAAAKKTKPAGKAAGKAGKSTRTRLNFGQQLEVLKLLDEKTTYAEIARRYSISTSAISLIKGKRQQLEQAAATNARSTTSKSSRRGDFPELEKDVLALIEEARRVPLPITRATIESFGIAVRDKL 206          
BLAST of mRNA_P-littoralis_Contig190.125.1 vs. uniprot
Match: A0A6H5KEK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEK9_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 1.500e-21
Identity = 63/177 (35.59%), Postives = 106/177 (59.89%), Query Frame = 0
Query:   34 CGEIQNPGGDEEVNRICQSCAAANESASSTNTRTNTHSNAAKRTEGGGILQQSAPKKRKGEK-----RNRLTLGQKREILQLLDQKVSRTEIMRRFNCGRSTVGDIRKDRATLQENAASTSWSETSKSRKGGDFPKVDSLVMTMIEDARKLRIPVTGATIEAYGVAAKKKLVAEAST 205
            CGE +  GG +E++R+C  C A  +    ++ +    S  ++    G   +++ P  +   K     R RL  GQ+ E+L+LLD+K +  EI RR++   S +  I+  R  L++ AA+ + S TSKS + GDFP+++  V+ +IE+AR++ +P+T ATIE++G+A + KLVA  ST
Sbjct:   16 CGEPEEEGG-QEIHRVCNPCIAKKQKTPGSSKQPKRASPESELAGDGAAAKKTKPAGKAAGKAGKSTRTRLNFGQQLEVLKLLDEKTTHAEIARRYSISTSAISLIKGKRQQLEQAAATNARSTTSKSSRRGDFPELEKDVLALIEEARRVPLPITRATIESFGIAVRDKLVAAPST 191          
BLAST of mRNA_P-littoralis_Contig190.125.1 vs. uniprot
Match: A0A6H5K1H9_9PHAE (HTH psq-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H9_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 2.350e-15
Identity = 67/176 (38.07%), Postives = 93/176 (52.84%), Query Frame = 0
Query:    1 MSCAAGELCHLSDRN-ITPE-LSCCGPRGGRLHRICGEIQNPGGDEEVNRICQSCAAANESASSTNTRTNTHSNAAKRTEGGGILQQSAPKKRKGE----KRNRLTLGQKREILQLLDQKVSRTE--IMRRFNCGRSTVGDIRKDRATLQENAASTSWSETS-KSRKGGDFPKVDS 167
            M CAAGELC L D+  + P    C G  GGRLH +CGE Q+   + E  RIC +C A+ +  S+ +T           TE G   +Q   K          R R+ +G K EIL+LLD K +RT+  I  +FNCG  TV  ++ +RA ++  AA T  S T+ K+ +  DFP+  S
Sbjct:    1 MPCAAGELCQLPDQTPVAPHGHQCHGGCGGRLHGLCGE-QDQDAEYETARICFACIASKQKGSNASTA-GKGKRKGSATESGDTARQKKTKPANHPDMTGSRTRMDIGTKMEILRLLD-KGTRTQKSIAEQFNCGERTVRTVKAERAKIENQAAKTRSSATTRKNLRAMDFPEESS 173          
BLAST of mRNA_P-littoralis_Contig190.125.1 vs. uniprot
Match: A0A6H5KX95_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX95_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 3.520e-12
Identity = 52/124 (41.94%), Postives = 72/124 (58.06%), Query Frame = 0
Query:   87 APKKR----KGEKRNRLTLGQKREILQLLDQK-VSRTEIMRRFNCGRSTVGDIRKDRATLQENAASTSWSETSKSRKGGDFPKVDSLVMTMIEDARKLRIPVTGATIEAYGVAAKKKLVAEAST 205
            APK+R    + + R RLTLGQK EIL LLDQK +SR EI   + C   TV     +R  L+  AAS++    SK R+   FP+VD  V+++I+     +IPV   TI ++G A K  L+A  +T
Sbjct:  125 APKRRACVDRSKPRARLTLGQKLEILDLLDQKKMSRVEIAAIYKCSDRTVSSCSVNRTILEAEAASSTRKLKSKGRRSAGFPEVDRRVLSLIKAFESSQIPVGRTTIASFGHAVKASLLAADAT 248          
BLAST of mRNA_P-littoralis_Contig190.125.1 vs. uniprot
Match: A0A6H5K3B1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3B1_9PHAE)

HSP 1 Score: 51.2 bits (121), Expect = 5.510e-5
Identity = 39/125 (31.20%), Postives = 63/125 (50.40%), Query Frame = 0
Query:    3 CAAGELCHLSDRNITPE------LSCCGPRGGRLHRICGEIQNPGGDEEVNRICQSCAAANESASSTNTRTNTHSNAAKRTEGGGILQQSAPKKRKGEK-----RNRLTLGQKREILQLLDQKVS 116
            CA  +LC L +R +  +      L C    GGRLH ICGE +  GG +E++R+C  C A  +    ++ +    S  ++    G   +++ P  +   K     R RL  GQ+ E+L+LLD+K +
Sbjct:    4 CADQQLCKLPNRPLGEKDGHECRLGC----GGRLHGICGEPEEEGG-QEIHRVCNPCIAKKQKTPGSSKQPKRASPESELAGDGAAAKKTKPAGKAAGKAGKSTRTRLNFGQQLEVLKLLDEKTT 123          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig190.125.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KNH6_9PHAE1.050e-2736.45Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L4Y6_9PHAE3.350e-2735.58Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEK9_9PHAE1.500e-2135.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1H9_9PHAE2.350e-1538.07HTH psq-type domain-containing protein n=2 Tax=Ect... [more]
A0A6H5KX95_9PHAE3.520e-1241.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3B1_9PHAE5.510e-531.20Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007889DNA binding HTH domain, Psq-typePFAMPF04218CENP-B_Ncoord: 94..143
e-value: 1.2E-12
score: 47.2
NoneNo IPR availableGENE3D1.10.10.60coord: 93..141
e-value: 5.1E-10
score: 40.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..99
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..79
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 93..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig190contigP-littoralis_Contig190:391772..392619 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig190.125.1mRNA_P-littoralis_Contig190.125.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig190 391761..392619 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig190.125.1 ID=prot_P-littoralis_Contig190.125.1|Name=mRNA_P-littoralis_Contig190.125.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=206bp
MSCAAGELCHLSDRNITPELSCCGPRGGRLHRICGEIQNPGGDEEVNRIC
QSCAAANESASSTNTRTNTHSNAAKRTEGGGILQQSAPKKRKGEKRNRLT
LGQKREILQLLDQKVSRTEIMRRFNCGRSTVGDIRKDRATLQENAASTSW
SETSKSRKGGDFPKVDSLVMTMIEDARKLRIPVTGATIEAYGVAAKKKLV
AEASTT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007889HTH_Psq
IPR009057Homeobox-like_sf