mRNA_P-littoralis_Contig190.119.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig190.119.1 vs. uniprot
Match: A0A6H5JR14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR14_9PHAE) HSP 1 Score: 194 bits (493), Expect = 6.140e-55 Identity = 91/125 (72.80%), Postives = 109/125 (87.20%), Query Frame = 2
Query: 128 RPRYARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLRDTPRYVNPRHHCQDVVENRFGHMRDGLGSHRN 502
R YAR+ GLDK+AGYI+SADDSKLEEL++++RFF+KWR +L+EKTT+GD TWKKHFITE+SWTDIRV ILGFVSMCRYLFE+DSRFKVS R P ++N R+ QDV+E+ FGHMR GLGSHRN
Sbjct: 554 RSEYARRNGLDKEAGYISSADDSKLEELINMVRFFDKWRSSLQEKTTMGDETWKKHFITEFSWTDIRVCILGFVSMCRYLFEEDSRFKVSPRRPWPHFINQRNCGQDVIEHCFGHMRQGLGSHRN 678
BLAST of mRNA_P-littoralis_Contig190.119.1 vs. uniprot
Match: A0A6H5JTX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX6_9PHAE) HSP 1 Score: 164 bits (415), Expect = 6.850e-48 Identity = 82/122 (67.21%), Postives = 94/122 (77.05%), Query Frame = 2
Query: 137 YARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLRDTPRYVNPRHHCQDVVENRFGHMRDGLGSHRN 502
YARK GLDK GY SADDSKLE LMDILRFF++WR +LE + TLGD WK HFIT++SWTDIRV ILG VSMCRYLFE DSRFK+ L D P ++N R QD+VE+R+GHM LGSH N
Sbjct: 44 YARKNGLDKMVGYTGSADDSKLEGLMDILRFFDEWRASLEARPTLGD--WKAHFITDHSWTDIRVCILGTVSMCRYLFEKDSRFKIYPLSDVPHFINLRCIGQDIVEHRYGHMCQCLGSHCN 163
BLAST of mRNA_P-littoralis_Contig190.119.1 vs. uniprot
Match: A0A6H5JRH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRH8_9PHAE) HSP 1 Score: 140 bits (354), Expect = 1.250e-35 Identity = 67/108 (62.04%), Postives = 81/108 (75.00%), Query Frame = 2
Query: 137 YARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLRDTPRYVNPRHHCQDVVEN 460
YARK GLDK YI SADDSKLEE+MDIL F++WR +LE + TLGD WK HFIT++SWTDIRV ILG VSMCRY+FE+DS FK+ L D P ++N R+ Q +N
Sbjct: 434 YARKNGLDKMVSYIRSADDSKLEEVMDILLLFDEWRASLEARPTLGDGAWKAHFITDHSWTDIRVCILGTVSMCRYVFEEDSTFKIPPLSDVPHFINLRYIGQASQKN 541
BLAST of mRNA_P-littoralis_Contig190.119.1 vs. uniprot
Match: A0A6H5K5I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5I6_9PHAE) HSP 1 Score: 121 bits (303), Expect = 1.250e-30 Identity = 63/130 (48.46%), Postives = 87/130 (66.92%), Query Frame = 2
Query: 128 RPRYARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEK---TTLGD-VTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLR-DTPRYVNPRHHCQDVVENRFGHMRDGLGSHRN 502
R + RK G K G I S + + ++ L++IL FF+ W+ LE K + GD + WKKHFIT SW D+R+SILGFVSMCRYLFED RF++ L + R+++PR+ QD+ E+RF H+R LG+HRN
Sbjct: 69 RSKVDRKDGSKKMVGCIRSFESAPMDRLLEILEFFDDWQSTLERKHIPSGEGDKLGWKKHFITHQSWFDLRLSILGFVSMCRYLFEDPERFQIDSLSPNCRRFLSPRNCSQDICEHRFSHIRAALGTHRN 198
BLAST of mRNA_P-littoralis_Contig190.119.1 vs. uniprot
Match: A0A6H5JZW9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZW9_9PHAE) HSP 1 Score: 114 bits (286), Expect = 6.070e-30 Identity = 54/82 (65.85%), Postives = 62/82 (75.61%), Query Frame = 2
Query: 170 GYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLRDTP 415
GYI S DDSKL+ELMDIL FF++WR +LE + TLGD WK HFIT++ WTD RV ILG V MCRYL E DSRFK+S L P
Sbjct: 3 GYIRSTDDSKLDELMDILWFFDEWRASLEARPTLGDGAWKAHFITDHLWTDSRVCILGTVRMCRYLIEKDSRFKISPLNMFP 84
BLAST of mRNA_P-littoralis_Contig190.119.1 vs. uniprot
Match: A0A6H5K7Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z3_9PHAE) HSP 1 Score: 117 bits (293), Expect = 1.840e-27 Identity = 57/120 (47.50%), Postives = 80/120 (66.67%), Query Frame = 2
Query: 143 RKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLRDTPRYVNPRHHCQDVVENRFGHMRDGLGSHRN 502
RK+G +K+ GYIT AD L L++IL FF+ W+ +LE G W HFIT+YSWTD+R +ILGFV+MCRY+F+D+ L R++ PR QD++E+RF H+R G G+H+N
Sbjct: 483 RKQGGNKRKGYITGADSPLLGRLLEILEFFDSWQVSLEAH--FGPKEWANHFITDYSWTDMRTTILGFVAMCRYVFKDED------LVSGGRFLYPRMFSQDILEHRFAHIRSGRGTHKN 594
BLAST of mRNA_P-littoralis_Contig190.119.1 vs. uniprot
Match: A0A6H5KH17_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH17_9PHAE) HSP 1 Score: 107 bits (267), Expect = 1.060e-26 Identity = 51/71 (71.83%), Postives = 58/71 (81.69%), Query Frame = 2
Query: 137 YARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFV 349
YARK GLDK GYI SADDSKLEELMDILRFF++WR +LE + TLG WK +FIT++SWTDIRV ILG V
Sbjct: 31 YARKNGLDKMVGYIRSADDSKLEELMDILRFFDEWRASLEARPTLGGRAWKAYFITDHSWTDIRVCILGTV 101
BLAST of mRNA_P-littoralis_Contig190.119.1 vs. uniprot
Match: A0A6H5JNK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNK0_9PHAE) HSP 1 Score: 87.8 bits (216), Expect = 4.990e-20 Identity = 42/61 (68.85%), Postives = 51/61 (83.61%), Query Frame = 2
Query: 170 GYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVS 352
GYI SAD SKLE LMDILRFF++WR +LE + TLGD TW+ HFIT++SWTDI+V ILG V+
Sbjct: 3 GYIRSADRSKLE-LMDILRFFDEWRASLEARPTLGDGTWEAHFITDHSWTDIQVCILGTVA 62
BLAST of mRNA_P-littoralis_Contig190.119.1 vs. uniprot
Match: A0A6H5K095_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K095_9PHAE) HSP 1 Score: 77.4 bits (189), Expect = 4.300e-16 Identity = 35/49 (71.43%), Postives = 41/49 (83.67%), Query Frame = 2
Query: 167 AGYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYS 313
AGYI SADDSKLEELMDILRF +WR +LE ++TLGD WK HFIT++S
Sbjct: 2 AGYIRSADDSKLEELMDILRFLGEWRASLEARSTLGDCAWKAHFITDHS 50
BLAST of mRNA_P-littoralis_Contig190.119.1 vs. uniprot
Match: A0A6H5K071_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K071_9PHAE) HSP 1 Score: 70.9 bits (172), Expect = 3.280e-11 Identity = 41/122 (33.61%), Postives = 65/122 (53.28%), Query Frame = 2
Query: 149 KGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLE----EKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLRDTPRYVNPRHHCQDVVENRFGHMRDGLGSHRN 502
K +D + ITS D L+ L++IL +F+ W +L L D+ F+ + +W D+R++ILGFV+M RY+F DD + R +++ + D E RFGH+R G H+N
Sbjct: 502 KRIDIRKSCITSKDSPLLDRLLEILEWFDTWWQDLNLFGGSDLALDDL-----FLPDQTWDDLRLTILGFVAMTRYVFGDDD-WVTEGSRGRYKFMRDWNQASDTCEKRFGHIRANQGCHKN 617 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig190.119.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig190.119.1 >prot_P-littoralis_Contig190.119.1 ID=prot_P-littoralis_Contig190.119.1|Name=mRNA_P-littoralis_Contig190.119.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=159bp MLSTPEKDEGGPRTRSHTTPTTSDRALESDRCAPRPRYARKKGLDKKAGYback to top mRNA from alignment at P-littoralis_Contig190:366960..368485- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig190.119.1 ID=mRNA_P-littoralis_Contig190.119.1|Name=mRNA_P-littoralis_Contig190.119.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1526bp|location=Sequence derived from alignment at P-littoralis_Contig190:366960..368485- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig190:366960..368485- >mRNA_P-littoralis_Contig190.119.1 ID=mRNA_P-littoralis_Contig190.119.1|Name=mRNA_P-littoralis_Contig190.119.1|organism=Pylaiella littoralis U1_48|type=CDS|length=477bp|location=Sequence derived from alignment at P-littoralis_Contig190:366960..368485- (Pylaiella littoralis U1_48)back to top |