prot_P-littoralis_Contig190.45.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig190.45.2
Unique Nameprot_P-littoralis_Contig190.45.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length64
Homology
BLAST of mRNA_P-littoralis_Contig190.45.2 vs. uniprot
Match: D7FSK9_ECTSI (Nucleolar protein 10 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSK9_ECTSI)

HSP 1 Score: 123 bits (309), Expect = 8.300e-36
Identity = 57/63 (90.48%), Postives = 61/63 (96.83%), Query Frame = 0
Query:    1 MHLMYYMKNGKRVYTLKKADPEGNLTESAHPARFSPDDKFSGARVANKARFGVLPTQQAPIVL 63
            MHLMYY++NGKRVYTLKKA+P GNLTESAHPARFSPDDKFSGARVANKARFGVLPTQQ PI+L
Sbjct:    1 MHLMYYLENGKRVYTLKKANPAGNLTESAHPARFSPDDKFSGARVANKARFGVLPTQQPPIIL 63          
BLAST of mRNA_P-littoralis_Contig190.45.2 vs. uniprot
Match: A0A0G4J2C6_PLABS (Nucleolar protein 10 n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J2C6_PLABS)

HSP 1 Score: 101 bits (252), Expect = 4.170e-27
Identity = 47/61 (77.05%), Postives = 51/61 (83.61%), Query Frame = 0
Query:    1 MHLMYYMKNGKRVYTLKKADPEGNLTESAHPARFSPDDKFSGARVANKARFGVLPTQQAPI 61
            MHLMYYM++GKRVYTLKK DP G  T SAHPARFSPDDK+S  RV  K RFG+LPTQQAPI
Sbjct:    1 MHLMYYMEDGKRVYTLKKVDPRGMPTHSAHPARFSPDDKYSRERVTIKKRFGILPTQQAPI 61          
BLAST of mRNA_P-littoralis_Contig190.45.2 vs. uniprot
Match: L8H2Y9_ACACA (Nucleolar protein 10 n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H2Y9_ACACA)

HSP 1 Score: 96.3 bits (238), Expect = 5.860e-25
Identity = 46/61 (75.41%), Postives = 51/61 (83.61%), Query Frame = 0
Query:    1 MHLMYYM-KNGKRVYTLKKADPEGNLTESAHPARFSPDDKFSGARVANKARFGVLPTQQAP 60
            MHLMYY+ K+GKRVYTLKK++PEG  T SAHPARFSPDDKFS  RV  K RFG+LPTQQ P
Sbjct:    1 MHLMYYLDKDGKRVYTLKKSNPEGTATVSAHPARFSPDDKFSRQRVTLKKRFGILPTQQPP 61          
BLAST of mRNA_P-littoralis_Contig190.45.2 vs. uniprot
Match: A7S3U4_NEMVE (Nucleolar protein 10 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7S3U4_NEMVE)

HSP 1 Score: 92.4 bits (228), Expect = 1.970e-23
Identity = 45/60 (75.00%), Postives = 48/60 (80.00%), Query Frame = 0
Query:    1 MHLMYYMKN-GKRVYTLKKADPEGNLTESAHPARFSPDDKFSGARVANKARFGVLPTQQA 59
            MHLMYYM N GKRVYTLKK DP G  T SAHPARFSPDDK+S  RV  K RFG+LPTQQ+
Sbjct:    1 MHLMYYMDNDGKRVYTLKKQDPSGKPTTSAHPARFSPDDKYSRHRVTLKKRFGILPTQQS 60          
BLAST of mRNA_P-littoralis_Contig190.45.2 vs. uniprot
Match: A0A3M6UWD8_POCDA (Nucleolar protein 10 n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6UWD8_POCDA)

HSP 1 Score: 92.4 bits (228), Expect = 1.970e-23
Identity = 45/60 (75.00%), Postives = 49/60 (81.67%), Query Frame = 0
Query:    1 MHLMYYMKN-GKRVYTLKKADPEGNLTESAHPARFSPDDKFSGARVANKARFGVLPTQQA 59
            MHLMYY+ N GKRVYTLKK DP G  T+SAHPARFSPDDK+S  RV  K RFG+LPTQQA
Sbjct:    1 MHLMYYLNNEGKRVYTLKKIDPLGQPTKSAHPARFSPDDKYSRHRVTLKRRFGILPTQQA 60          
BLAST of mRNA_P-littoralis_Contig190.45.2 vs. uniprot
Match: A0A0L0HHH4_SPIPD (H/ACA ribonucleoprotein complex subunit NOP10 n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HHH4_SPIPD)

HSP 1 Score: 92.4 bits (228), Expect = 2.020e-23
Identity = 44/60 (73.33%), Postives = 52/60 (86.67%), Query Frame = 0
Query:    1 MHLMYYM-KNGKRVYTLKKADPEGNLTESAHPARFSPDDKFSGARVANKARFGVLPTQQA 59
            MHLMYY+ ++GKRVYTLKK  PEG++T+SAHPARFSPDDK+S  RV  K RFG+LPTQQA
Sbjct:    1 MHLMYYLDESGKRVYTLKKLTPEGSVTKSAHPARFSPDDKYSRHRVTLKRRFGLLPTQQA 60          
BLAST of mRNA_P-littoralis_Contig190.45.2 vs. uniprot
Match: UPI000874AB97 (H/ACA ribonucleoprotein complex subunit 3 n=1 Tax=Anoplophora glabripennis TaxID=217634 RepID=UPI000874AB97)

HSP 1 Score: 90.1 bits (222), Expect = 1.580e-22
Identity = 40/58 (68.97%), Postives = 50/58 (86.21%), Query Frame = 0
Query:    1 MHLMYYMKNGKRVYTLKKADPEGNLTESAHPARFSPDDKFSGARVANKARFGVLPTQQ 58
            M+LMYY++NGKRVYTLKK DP GN TESAHPARFSP+DK+S  R+  K+R+G+L TQ+
Sbjct:    1 MYLMYYLENGKRVYTLKKTDPWGNPTESAHPARFSPEDKYSKQRIIIKSRYGLLKTQK 58          
BLAST of mRNA_P-littoralis_Contig190.45.2 vs. uniprot
Match: A0A836CEE6_9STRA (Nucleolar protein 10 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEE6_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 2.300e-22
Identity = 44/58 (75.86%), Postives = 48/58 (82.76%), Query Frame = 0
Query:    1 MHLMYYM-KNGKRVYTLKKADPEGNLTESAHPARFSPDDKFSGARVANKARFGVLPTQ 57
            MHLMYYM ++GKRVYTLKK DP G+ T SAHPARFSPDDKFS  RV NK RFG+L TQ
Sbjct:    1 MHLMYYMGEDGKRVYTLKKEDPTGSPTVSAHPARFSPDDKFSHQRVVNKKRFGILLTQ 58          
BLAST of mRNA_P-littoralis_Contig190.45.2 vs. uniprot
Match: K3WVP2_GLOUD (Nucleolar protein 10 n=3 Tax=Pythiaceae TaxID=4782 RepID=K3WVP2_GLOUD)

HSP 1 Score: 89.4 bits (220), Expect = 3.350e-22
Identity = 42/58 (72.41%), Postives = 47/58 (81.03%), Query Frame = 0
Query:    1 MHLMYYM-KNGKRVYTLKKADPEGNLTESAHPARFSPDDKFSGARVANKARFGVLPTQ 57
            MHLMYY+ ++GKRVYTLKK DP G  T SAHPARFSPDDKFS  R+  K RFG+LPTQ
Sbjct:    1 MHLMYYLGEDGKRVYTLKKEDPSGKPTHSAHPARFSPDDKFSKERIITKKRFGLLPTQ 58          
BLAST of mRNA_P-littoralis_Contig190.45.2 vs. uniprot
Match: A0A5B8MZ39_9CHLO (Nucleolar protein 10 n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MZ39_9CHLO)

HSP 1 Score: 88.2 bits (217), Expect = 9.140e-22
Identity = 41/60 (68.33%), Postives = 46/60 (76.67%), Query Frame = 0
Query:    1 MHLMYYMKNGKRVYTLKKADPEGNLTESAHPARFSPDDKFSGARVANKARFGVLPTQQAP 60
            M+LMYY + GKRVYTLKK  P    TESAHPARFSPDDK+S  RV  K RFG+LPTQ+ P
Sbjct:    1 MYLMYYTEEGKRVYTLKKVTPGDQPTESAHPARFSPDDKYSRERVTCKKRFGILPTQRPP 60          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig190.45.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSK9_ECTSI8.300e-3690.48Nucleolar protein 10 n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A0G4J2C6_PLABS4.170e-2777.05Nucleolar protein 10 n=1 Tax=Plasmodiophora brassi... [more]
L8H2Y9_ACACA5.860e-2575.41Nucleolar protein 10 n=1 Tax=Acanthamoeba castella... [more]
A7S3U4_NEMVE1.970e-2375.00Nucleolar protein 10 n=1 Tax=Nematostella vectensi... [more]
A0A3M6UWD8_POCDA1.970e-2375.00Nucleolar protein 10 n=1 Tax=Pocillopora damicorni... [more]
A0A0L0HHH4_SPIPD2.020e-2373.33H/ACA ribonucleoprotein complex subunit NOP10 n=2 ... [more]
UPI000874AB971.580e-2268.97H/ACA ribonucleoprotein complex subunit 3 n=1 Tax=... [more]
A0A836CEE6_9STRA2.300e-2275.86Nucleolar protein 10 n=1 Tax=Tribonema minus TaxID... [more]
K3WVP2_GLOUD3.350e-2272.41Nucleolar protein 10 n=3 Tax=Pythiaceae TaxID=4782... [more]
A0A5B8MZ39_9CHLO9.140e-2268.33Nucleolar protein 10 n=1 Tax=Chloropicon primus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007264H/ACA ribonucleoprotein complex, subunit Nop10PFAMPF04135Nop10pcoord: 4..51
e-value: 8.0E-18
score: 64.2
IPR007264H/ACA ribonucleoprotein complex, subunit Nop10PANTHERPTHR13305RIBOSOME BIOGENESIS PROTEIN NOP10coord: 1..61
NoneNo IPR availableGENE3D4.10.80.300coord: 1..29
e-value: 4.2E-14
score: 53.9
IPR036756H/ACA ribonucleoprotein complex, subunit Nop10 superfamilySUPERFAMILY144210Nop10-like SnoRNPcoord: 2..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig190contigP-littoralis_Contig190:245696..263673 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig190.45.2mRNA_P-littoralis_Contig190.45.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig190 245364..265460 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig190.45.2 ID=prot_P-littoralis_Contig190.45.2|Name=mRNA_P-littoralis_Contig190.45.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=64bp
MHLMYYMKNGKRVYTLKKADPEGNLTESAHPARFSPDDKFSGARVANKAR
FGVLPTQQAPIVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007264H/ACA_rnp_Nop10
IPR036756H/ACA_rnp_Nop10_sf