prot_P-littoralis_Contig190.22.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig190.22.2
Unique Nameprot_P-littoralis_Contig190.22.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length682
Homology
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BLAST of mRNA_P-littoralis_Contig190.22.2 vs. uniprot
Match: A0A6H5KXX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXX4_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 7.340e-9
Identity = 40/75 (53.33%), Postives = 46/75 (61.33%), Query Frame = 0 
Query:   12 KARISSLVPTVRVFGLTWRLPTRVLRAEAAVELWTWLEVLKLREASSADSRSLSGGGLEAMIWPPGLKRLVLDFG 86
            KARISS VP  +  GLTW LPT +L    AVELWT LE L+LRE       SLS   L ++ WP  LKRL L+ G
Sbjct:  108 KARISSRVPVGQALGLTWALPTEILLQGVAVELWTKLEFLQLRE-------SLSPSDLVSVAWPQNLKRLALETG 175
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig190.22.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KXX4_9PHAE7.340e-953.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 373..422
e-value: 2.6E-4
score: 21.1
coord: 307..349
e-value: 6.4E-6
score: 26.2
coord: 219..262
e-value: 1.3E-6
score: 28.5
coord: 599..639
e-value: 2.7E-7
score: 30.6
coord: 533..575
e-value: 4.1E-5
score: 23.6
coord: 423..464
e-value: 3.6E-6
score: 27.0
coord: 489..531
e-value: 2.9E-8
score: 33.7
coord: 139..174
e-value: 1.0E-4
score: 22.4
coord: 263..305
e-value: 8.8E-6
score: 25.8
NoneNo IPR availablePANTHERPTHR32134:SF114FNIP REPEAT-CONTAINING PROTEIN DDB_G0274063/DDB_G0272642-RELATEDcoord: 479..668
coord: 92..313
NoneNo IPR availablePANTHERPTHR32134:SF114FNIP REPEAT-CONTAINING PROTEIN DDB_G0274063/DDB_G0272642-RELATEDcoord: 307..492
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 479..668
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 307..492
NoneNo IPR availablePANTHERPTHR32134:SF114FNIP REPEAT-CONTAINING PROTEIN DDB_G0274063/DDB_G0272642-RELATEDcoord: 389..557
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 389..557
coord: 92..313
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 116..464
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 391..660

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig190contigP-littoralis_Contig190:120554..140797 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig190.22.2mRNA_P-littoralis_Contig190.22.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig190 120359..141680 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig190.22.2 ID=prot_P-littoralis_Contig190.22.2|Name=mRNA_P-littoralis_Contig190.22.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=682bp
MSPTQQSTHRSKARISSLVPTVRVFGLTWRLPTRVLRAEAAVELWTWLEV
LKLREASSADSRSLSGGGLEAMIWPPGLKRLVLDFGGKMGLEAVSWPAFR
EEISFGEAFNQPIARIVWPASLQRLSFSHFFLEPITRVKWPASLRHLSFG
DYFDQAIVEVAWPDSLEQLSFGRFFVHPIAGVVWPASLRRLSFGIEFNQP
IAGVVWPASLQQLSFEEEFNHPIAGVVWPASLGKLSFGADFNHPIAGVVW
PASLRKLSFGYSFNRPISGTVWPASLRHLSLGDSFNQLVAGVVWPASLRH
LSFGSDFNQPLTGSVWPASLKQLSFEDRFNQPITGVVWPAYLQELLFGQD
FNKPITGVVWPASLQQLSCGQDFNQPIAGVVTSIGVVWPASLQQLSFGVY
FDRPIAGVVWPASLKQLSFGCFFDKSIAGVVWPDSLQQLSFGDGFNQPIS
GAMWPASLRHLSFGAEFDQPITGTAWPTSLERLSFEESFNQPIAGVVWPA
SLKQLSFGRYFNQPIAGVVWPASLRQLSFGQEFNQHIAEVAWPTSLRELS
FGRSFNRSITGVVWPASLRQLSFGSWFNQRITQAVWPAFLERLSFGRFFN
QPIDGVLWPAALKGLFFGRNFNQPIAKVSWPPSLKLLSFWRHFDQPIADI
AWPASLEQIWFDDDFHRPIITRFCNGRPCKV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP