prot_P-littoralis_Contig19.195.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig19.195.1
Unique Nameprot_P-littoralis_Contig19.195.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length123
Homology
BLAST of mRNA_P-littoralis_Contig19.195.1 vs. uniprot
Match: A0A6H5K718_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K718_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 1.040e-54
Identity = 90/121 (74.38%), Postives = 102/121 (84.30%), Query Frame = 0
Query:    2 VRVRFRGHKGDQTEQGSYIVRVRDIAHGRRSAVGAGGGAVAVLVELMTCHLSLPESAPLCSFRCSRSKDVKVLGYHKASKALRQIVQKAGGDPNTVGLHSLRIGAATTLAAGGQIPDRIIQ 122
            VRVRFRGHKGDQ+E+G+ + RVR++A G  S +GAGGGAVAVLVELM CHL+LPE APLCSFRC RSK +KV GY KA  A  QIV+KAGG+P  VGLHSLRIGAATTLAAGG +PDRIIQ
Sbjct:  137 VRVRFRGHKGDQSEKGACVTRVREVARGASSQIGAGGGAVAVLVELMACHLALPEDAPLCSFRCRRSKTIKVWGYSKALSA--QIVEKAGGNPKQVGLHSLRIGAATTLAAGGDVPDRIIQ 255          
BLAST of mRNA_P-littoralis_Contig19.195.1 vs. uniprot
Match: A0A6H5KTP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTP7_9PHAE)

HSP 1 Score: 191 bits (484), Expect = 4.680e-54
Identity = 93/121 (76.86%), Postives = 103/121 (85.12%), Query Frame = 0
Query:    2 VRVRFRGHKGDQTEQGSYIVRVRDIAHGRRSAVGAGGGAVAVLVELMTCHLSLPESAPLCSFRCSRSKDVKVLGYHKASKALRQIVQKAGGDPNTVGLHSLRIGAATTLAAGGQIPDRIIQ 122
            VRVRFRGHKGDQ+E+G+ + RVR++A G  S +GAGGGAVAVLVELM CHL+LPE APLCSFRC RSK +KV GY KA  ALRQIV KAGGDP  VGLHSLRIGAATTLAAGG +PDRIIQ
Sbjct:  754 VRVRFRGHKGDQSEKGACVTRVREVARGASSQIGAGGGAVAVLVELMACHLALPEDAPLCSFRCRRSKTIKVWGYPKALSALRQIVDKAGGDPKQVGLHSLRIGAATTLAAGGDVPDRIIQ 874          
BLAST of mRNA_P-littoralis_Contig19.195.1 vs. uniprot
Match: A0A6H5KCI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI7_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 7.020e-34
Identity = 66/122 (54.10%), Postives = 88/122 (72.13%), Query Frame = 0
Query:    2 VRVRFRGHKGDQTEQGSYIVRVRDIAHGRRSAVGAGGGAVAVLVELMTCHLSLPESAPLCSFRCSRSKDVKVLGYHKASKALRQIVQKAGGDPNTVGLHSLRIGAATTLAAGGQIPDRIIQR 123
            V +RFRGHKGDQ + G    R RD  HG RS   A GGAVA++V  ++CH +LP+SAPL S+R  +  +VKVL Y +A +ALR+IV+++G +P    LHSLRIG A+TLAAGG + +R+IQR
Sbjct:  293 VEIRFRGHKGDQGQIGDVRARTRDEVHGPRSGYRANGGAVALMVASLSCHATLPDSAPLSSYRSGQ--EVKVLKYDQALRALREIVERSGRNPKDFALHSLRIGGASTLAAGGAVSERVIQR 412          
BLAST of mRNA_P-littoralis_Contig19.195.1 vs. uniprot
Match: A0A6H5JL16_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL16_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 5.800e-32
Identity = 56/76 (73.68%), Postives = 61/76 (80.26%), Query Frame = 0
Query:   48 MTCHLSLPESAPLCSFRCSRSKDVKVLGYHKASKALRQIVQKAGGDPNTVGLHSLRIGAATTLAAGGQIPDRIIQR 123
            M CHL+LPE APLCS RC RSK +KV GY KA  ALRQIV++AGGDP  VGLHSLRIGA TTLAAGG +PDR  QR
Sbjct:    1 MACHLALPEDAPLCSCRCRRSKTIKVWGYSKALSALRQIVEEAGGDPKQVGLHSLRIGATTTLAAGGDVPDRTTQR 76          
BLAST of mRNA_P-littoralis_Contig19.195.1 vs. uniprot
Match: A0A6H5K3G1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3G1_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 3.440e-9
Identity = 39/90 (43.33%), Postives = 51/90 (56.67%), Query Frame = 0
Query:    2 VRVRFRGHKGDQTEQGSYIVRVRDIAHGRRSAVGAGGGAVAVLVELMTCHLSLPESAPLCSFRCSRSKDVKVLGYHKASKALRQIVQKAG 91
            V VRFR  KGDQ  +G+   R R    G   +V  GGGAV V++EL++C   LP SAPL +F     +   V     A++ALRQ+V  AG
Sbjct:  241 VEVRFRSSKGDQFRKGAVCTRARP---GPPQSVECGGGAVDVMIELLSCFPVLPSSAPLVAFGTGEGR-WSVWTRRHATEALRQVVSLAG 326          
BLAST of mRNA_P-littoralis_Contig19.195.1 vs. uniprot
Match: A0A6H5K297_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K297_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 1.790e-7
Identity = 33/75 (44.00%), Postives = 45/75 (60.00%), Query Frame = 0
Query:   44 LVELMTCHLSLPESAPLCSFRCSRSKDVKVLGYHKASKALRQIVQKAGGDPNTVGLHSLRIGAATTLAAGGQIPD 118
            +VEL++ +  LP  APL +F   + +   +    +A+ ALRQ+V  AG  P    LHSLRIG AT LAAGG  P+
Sbjct:    1 MVELLSLYTFLPSHAPLVAFGVGQGQWA-MWTKCQATVALRQVVALAGLQPEEYALHSLRIGGATFLAAGGASPE 74          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig19.195.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5K718_9PHAE1.040e-5474.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KTP7_9PHAE4.680e-5476.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCI7_9PHAE7.020e-3454.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JL16_9PHAE5.800e-3273.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3G1_9PHAE3.440e-943.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K297_9PHAE1.790e-744.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013762Integrase-like, catalytic domain superfamilyGENE3D1.10.443.10Intergrase catalytic corecoord: 1..123
e-value: 1.2E-7
score: 33.6
IPR011010DNA breaking-rejoining enzyme, catalytic coreSUPERFAMILY56349DNA breaking-rejoining enzymescoord: 68..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig19contigP-littoralis_Contig19:881641..882009 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig19.195.1mRNA_P-littoralis_Contig19.195.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig19 881641..882498 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig19.195.1 ID=prot_P-littoralis_Contig19.195.1|Name=mRNA_P-littoralis_Contig19.195.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=123bp
MVRVRFRGHKGDQTEQGSYIVRVRDIAHGRRSAVGAGGGAVAVLVELMTC
HLSLPESAPLCSFRCSRSKDVKVLGYHKASKALRQIVQKAGGDPNTVGLH
SLRIGAATTLAAGGQIPDRIIQR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013762Integrase-like_cat_sf
IPR011010DNA_brk_join_enz