mRNA_P-littoralis_Contig19.195.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig19.195.1 vs. uniprot
Match: A0A6H5KTP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTP7_9PHAE) HSP 1 Score: 380 bits (975), Expect = 2.920e-122 Identity = 189/282 (67.02%), Postives = 212/282 (75.18%), Query Frame = 1
Query: 10 QYLSAHETQPAFVQALMEFVARCCAQKGNLAKAISGKLAAVKYFHRVNVQVELPTDSQLINRELRGIERVHVHVGTPRRVRLPVSWEVLLSGQDLVPSWGQGGRILWLCLALSYFLVARSEEIFASA*GGIHAIHCLRRDDVTFLAEEKALPPLHWHKATMVRVRFRGHKGDQTEQGSYIVRVRDIAHGRRSAVGAGGGAVAVLVELMTCHLSLPESAPLCSFRCSRSKDVKVLGYHKASKALRQIVQKAGGDPNTVGLHSLRIGAATTLAAGGQIPDRIIQ 855
+YLS QAL+EFVA CCA KGN+A ISGKLAAV+YFHRV+ Q+ELP + LI L G RVHV GT R R+PVSWE LL GQ L SWG GGR+LWLCL LSYF VARS+E+ A+ G H +HCLRR DV F E L LHWHKAT VRVRFRGHKGDQ+E+G+ + RVR++A G S +GAGGGAVAVLVELM CHL+LPE APLCSFRC RSK +KV GY KA ALRQIV KAGGDP VGLHSLRIGAATTLAAGG +PDRIIQ
Sbjct: 593 EYLSGDADGAGLEQALLEFVAWCCADKGNVAPTISGKLAAVQYFHRVDKQLELPAGAPLIKGSLLGFARVHVRAGTKSRSRVPVSWETLLEGQQLTASWGTGGRVLWLCLTLSYFQVARSDEVCATLSGQCHQVHCLRRSDVEFFDGEDVLAQLHWHKATGVRVRFRGHKGDQSEKGACVTRVREVARGASSQIGAGGGAVAVLVELMACHLALPEDAPLCSFRCRRSKTIKVWGYPKALSALRQIVDKAGGDPKQVGLHSLRIGAATTLAAGGDVPDRIIQ 874
BLAST of mRNA_P-littoralis_Contig19.195.1 vs. uniprot
Match: A0A6H5K718_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K718_9PHAE) HSP 1 Score: 317 bits (812), Expect = 2.660e-105 Identity = 167/282 (59.22%), Postives = 191/282 (67.73%), Query Frame = 1
Query: 10 QYLSAHETQPAFVQALMEFVARCCAQKGNLAKAISGKLAAVKYFHRVNVQVELPTDSQLINRELRGIERVHVHVGTPRRVRLPVSWEVLLSGQDLVPSWGQGGRILWLCLALSYFLVARSEEIFASA*GGIHAIHCLRRDDVTFLAEEKALPPLHWHKATMVRVRFRGHKGDQTEQGSYIVRVRDIAHGRRSAVGAGGGAVAVLVELMTCHLSLPESAPLCSFRCSRSKDVKVLGYHKASKALRQIVQKAGGDPNTVGLHSLRIGAATTLAAGGQIPDRIIQ 855
+YLS + QAL+EF A CCA KG G++ + L G+ RVHV GT R R+PVSWE LL GQ L SWG GGR LWL LALSYFLVARS+E+FA+ G H +HCLRR DV F E L LHWHKAT VRVRFRGHKGDQ+E+G+ + RVR++A G S +GAGGGAVAVLVELM CHL+LPE APLCSFRC RSK +KV GY KA A QIV+KAGG+P VGLHSLRIGAATTLAAGG +PDRIIQ
Sbjct: 6 EYLSGDADRAGLEQALLEFAAWCCADKG-------GRVXS-----------------------LLGVARVHVRAGTKSRNRVPVSWETLLEGQQLTASWGTGGRALWLWLALSYFLVARSDEVFATLSGQCHQVHCLRRSDVEFFDGEDVLAQLHWHKATGVRVRFRGHKGDQSEKGACVTRVREVARGASSQIGAGGGAVAVLVELMACHLALPEDAPLCSFRCRRSKTIKVWGYSKALSA--QIVEKAGGNPKQVGLHSLRIGAATTLAAGGDVPDRIIQ 255
BLAST of mRNA_P-littoralis_Contig19.195.1 vs. uniprot
Match: A0A6H5KCI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI7_9PHAE) HSP 1 Score: 253 bits (646), Expect = 5.550e-78 Identity = 122/237 (51.48%), Postives = 164/237 (69.20%), Query Frame = 1
Query: 148 VNVQVELPTDSQLINRELRGIERVHVHVGTPRRVRLPVSWEVLLSGQDLVPSWGQGGRILWLCLALSYFLVARSEEIFASA*GGIHAIHCLRRDDVTFLAEEKALPPLHWHKATMVRVRFRGHKGDQTEQGSYIVRVRDIAHGRRSAVGAGGGAVAVLVELMTCHLSLPESAPLCSFRCSRSKDVKVLGYHKASKALRQIVQKAGGDPNTVGLHSLRIGAATTLAAGGQIPDRIIQR 858
V QVE+ T S LI LRG+ R HV +G RRVRLPV+W +L + ++PSWG GR+ WLCL+LSYF + RS+E+FA++ G +H +HCL R DV F + L +HW +A V +RFRGHKGDQ + G R RD HG RS A GGAVA++V ++CH +LP+SAPL S+R + +VKVL Y +A +ALR+IV+++G +P LHSLRIG A+TLAAGG + +R+IQR
Sbjct: 178 VTRQVEIDTSSPLIKCALRGVARSHVDLGRRRRVRLPVTWSMLRDSEGIIPSWGLAGRVTWLCLSLSYFFITRSDEMFANSSGVVHPVHCLTRRDVAFFRGSRQLEYMHWQQADRVEIRFRGHKGDQGQIGDVRARTRDEVHGPRSGYRANGGAVALMVASLSCHATLPDSAPLSSYRSGQ--EVKVLKYDQALRALREIVERSGRNPKDFALHSLRIGGASTLAAGGAVSERVIQR 412
BLAST of mRNA_P-littoralis_Contig19.195.1 vs. uniprot
Match: A0A6H5K3G1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3G1_9PHAE) HSP 1 Score: 172 bits (436), Expect = 6.230e-48 Identity = 102/252 (40.48%), Postives = 141/252 (55.95%), Query Frame = 1
Query: 7 PQYLSAHETQPAFVQALMEFVARCCAQKGNLAKAISGKLAAVKYFHRVNVQVELPTDSQLINRELRGIERVHVHVGTPRRVRLPVSWEVLLSGQDLVPSWGQGGRILWLCLALSYFLVARSEEIFASA*GGIHAIHCLRRDDVTFLAEEKALPPLHWHKATMVRVRFRGHKGDQTEQGSYIVRVRDIAHGRRSAVGAGGGAVAVLVELMTCHLSLPESAPLCSFRCSRSKDVKVLGYHKASKALRQIVQKAG 762
P ++ P V L+E+VA G I+G L+AVK+FHR+ +E+ T LI + L+G+ R H VG +RVR PVSW +L G LVP WG GR+L+L L+ S+F + R+ E+FA + + + H LRR DV F + LPP +A V VRFR KGDQ +G+ R R G +V GGGAV V++EL++C LP SAPL +F + V A++ALRQ+V AG
Sbjct: 79 PTFMMPSSPSPDSVSQLLEYVAYAFTVLGLRQTTIAGHLSAVKFFHRLAYAMEVDTCHSLIKQALKGVARGHAGVGAQQRVRRPVSWSMLKEGGRLVPQWGTRGRVLFLALSASFFFLMRACEMFAVSSLAMDSCHGLRRGDVAFFLGSRQLPPERRGEADRVEVRFRSSKGDQFRKGAVCTRARP---GPPQSVECGGGAVDVMIELLSCFPVLPSSAPLVAFGTGEGR-WSVWTRRHATEALRQVVSLAG 326
BLAST of mRNA_P-littoralis_Contig19.195.1 vs. uniprot
Match: A0A6H5KDK3_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDK3_9PHAE) HSP 1 Score: 144 bits (363), Expect = 3.530e-37 Identity = 97/266 (36.47%), Postives = 141/266 (53.01%), Query Frame = 1
Query: 46 VQALMEFVARCCAQKGNLAKAISGKLAAVKYFHRVNVQVELPTDSQLINRELRGIERVHVHVGTPRRVRLPVSWEVLLSGQDLVPSWGQGGRILWLCLALSYFLVARSEEIFASA*GGIHAIHCLRRDDVTFLAEEKALPPLHWHKATMVRVRFRGHKGDQTEQGSYIVRVRDIAHGRRSAVGAGG----GAVAVLVELMTCHLSLPESAPLCSFRCSRSKDVKVLGYHKASKALRQIVQKAGGDPNTVGLHSLRIGAATTLAAGG 831
+ L+EF+A N + G LAAVK+FH++++ E+PT LI +GI R+ VG +VRLP++W +L G V + +GGR++WL LAL+YFL+ R+ E+FA A G +H CL R+ +TF + + A V+V F KGDQ G I R RS +G G GA +V ++ H LP +APL + + +V+ + ALR +V+ G +P LHS RIGAAT +AA G
Sbjct: 43 INTLLEFMACRLFAFDNQLSTVRGYLAAVKFFHKLHLGWEVPTSHCLIVAAGKGIARIRGGVGKKAQVRLPLTWSMLAQGYLTVSEFKEGGRVMWLGLALTYFLLCRASELFAYADGLVHPEFCLTRNSLTFYRGTERVGIEDRALADSVQVDFIASKGDQNRDGRSITR-------GRSPLGPDGEVPVGAFEAVVAILDVHPELPGNAPLLTRQTPSGW--RVITRTEGVAALRVMVESIGLNPAHFALHSGRIGAATQMAAQG 299
BLAST of mRNA_P-littoralis_Contig19.195.1 vs. uniprot
Match: A0A6H5KDR9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDR9_9PHAE) HSP 1 Score: 132 bits (331), Expect = 2.700e-32 Identity = 98/287 (34.15%), Postives = 134/287 (46.69%), Query Frame = 1
Query: 13 YLSAHETQPAFVQALMEFVARCCAQKGNLAKAISGKLAAVKYFHRVNVQVELPTDSQLINRELRGIERVHVHVGTPRRVRLPVSWEVLLSGQDLVPSWGQGGRILWLCLALSYFLVARSEEIFASA*GGIHAIHCLRRDDVTFL-AEEKALPPLHWHKATMVRVRFRGHKGDQTEQGSYIVRVRDI-------------AHGRRSAVGAGGGAVAVLVELMTCHLSLPESAPLCSFRCSRSKDVKVLGYHKASKALRQIVQKAGGDPNTVGLHSLRIGAATTLAAGG 831
YL + L +++A +GN I+GKL AVKY+H+ + V+LP G+ R + T R+R P+SW +L SG +WG+GGR+LWL LA+SYF + R EIFA G IH + R +V F E++ L P W A V V F K + E + + RV+ R VG GG VL+ELM C L AP+ ++ + KV ++S ALR +V G P HS RIG AT L A G
Sbjct: 42 YLDEARGEEVLASELAKYMAYLFFCRGNKMSTIAGKLVAVKYYHK-RIGVDLPMKHHFFRAVKAGLAREST-LHTESRMRRPISWTILRSGIRTAAAWGEGGRVLWLGLAVSYFFMCRPSEIFAYGNGKIHKEFGITRGNVAFWKGEQQLLTPALWRCADRVEVLFEASKSNHDE--AVVSRVKTCPGLAAFDWEWNGTGEVPRGMVGVGG--FEVLLELMCCFPQLDAMAPITAYPSGQVW--KVWTCAQSSSALRDLVAGQGLKPEEYAPHSGRIGGATRLGAMG 320
BLAST of mRNA_P-littoralis_Contig19.195.1 vs. uniprot
Match: A0A6H5JL16_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL16_9PHAE) HSP 1 Score: 117 bits (294), Expect = 9.000e-30 Identity = 56/76 (73.68%), Postives = 61/76 (80.26%), Query Frame = 1
Query: 631 MTCHLSLPESAPLCSFRCSRSKDVKVLGYHKASKALRQIVQKAGGDPNTVGLHSLRIGAATTLAAGGQIPDRIIQR 858
M CHL+LPE APLCS RC RSK +KV GY KA ALRQIV++AGGDP VGLHSLRIGA TTLAAGG +PDR QR
Sbjct: 1 MACHLALPEDAPLCSCRCRRSKTIKVWGYSKALSALRQIVEEAGGDPKQVGLHSLRIGATTTLAAGGDVPDRTTQR 76
BLAST of mRNA_P-littoralis_Contig19.195.1 vs. uniprot
Match: A0A836CHG6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHG6_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 6.400e-14 Identity = 68/254 (26.77%), Postives = 120/254 (47.24%), Query Frame = 1
Query: 118 KLAAVKYFHRV---NVQVELPTDSQLINRELRGIERVHVHVGTPRRVRLPVSWEVLLSGQDLVPSWGQGGRILWLCLALSYFLVARSEEIFASA*GGIHAIHCLRRDDVTFLAEEKALPPLHWHKATMVR--VRFRGHKGDQTEQGSYIVRVRDIAHGRRSAVGAGGGAVAVLVELMTCHLSLPESAPLCSFRCS---RSKDVKVLGYHKASKALRQIVQKAGGDPNTVGLHSLRIGAATTLAAGGQIPDRIIQ 855
KLAA++Y H + V+L +++ LRGI R P+R RLP+ + +++G + W C+ L++ L+ R+ E++A G +H C+R DV F +A+P + + R + R K DQ G+ + + GG L ++LP AP + + D++ + + + + +R +V + GG + +G HS+R+GAATTLA G +P+R+I+
Sbjct: 119 KLAAIRYHHLIPDHGPGVDLQPH-RIVAGVLRGIAR---QTAPPKR-RLPIFRDDIVAGYTGAAAGRPAAIATWRCILLAFHLLLRASELWAYNGGHVHPHFCVRACDVQFALGARAVPAIQALSGSADRAFITIRASKTDQYRHGAVL-----------TITATDGGPFDPLHVAAALLVALPPYAPPDCPTVTVAHGATDLRTITHGETTHMIRTLVAQHGGATSQLGTHSMRVGAATTLAHAG-VPERLIK 355
BLAST of mRNA_P-littoralis_Contig19.195.1 vs. uniprot
Match: W2KYM1_PHYPR (Uncharacterized protein n=2 Tax=Phytophthora parasitica TaxID=4792 RepID=W2KYM1_PHYPR) HSP 1 Score: 65.5 bits (158), Expect = 1.270e-8 Identity = 64/252 (25.40%), Postives = 105/252 (41.67%), Query Frame = 1
Query: 91 GNLAKAISGKLAAVKYFHRVNVQVELPTDSQLINRELRGIERVHVHVGTPRRVRLPVSWEVLLSGQDLVPSWGQGGRILWLCLALSYFLVARSEEIFASA*GGIHAIHCLRRDDVTFLAEEKALPPLHWHKATMVRVRFRGHKGDQTEQGSYIVRVRDIAHGRRSAVGAGGGAVAVLVELMTC-----HLSLPESAPLCSFRCSRSKDVKVLGYHKASKALRQIVQKAGGDPNTVGLHSLRIGAATTLAAGG 831
GN I K+A++K+FHR + + + +L L+GI+R+ P+R + P++ L + +LW + + YF + R E G +CL+ + F +K + + AT V + G K DQ +G++ R+ +G + L+ L L + LC +R+ SKAL++I +AG P HS+RIG AT L AGG
Sbjct: 34 GNKHSTIVLKIASIKWFHRRYKNLIISSSPRL-TMLLQGIKRL----SDPKRKKQPITMPFLRLLHRTLDLARPRQCLLWGSILIGYFFMLRRSEYLLI--GSTRYFYCLKASNAYF--SDKDGKAVKYALATSVTIGLEGAKNDQYGRGAW-----------RTMHASGDPVICPLLGLYNIIQARRDLKMRSEPHLCGNLSART----------VSKALKRIAVRAGVSPRAYATHSIRIGGATALVAGG 255
BLAST of mRNA_P-littoralis_Contig19.195.1 vs. uniprot
Match: A0A2P4X1D3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X1D3_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 3.000e-8 Identity = 68/262 (25.95%), Postives = 110/262 (41.98%), Query Frame = 1
Query: 64 FVARCCAQ------KGNLAKAISGKLAAVKYFHRVNVQVELPTDSQLINRELRGIERVHVHVGTPRRVRLPVSWEVLLSGQDLVPSWGQGGRILWLCLALSYFLVARSEEIFASA*GGIHAIHCLRRDDVTFLAEEKALPPLHWHKATMVRVRFRGHKGDQTEQGSYIVRVRDIAHGRRSAVGAGGGAVAVLVELMTCHLSLPESAPLCSFRCSRSKDVKVLGYHKASKALRQIVQKAGGDPNTVGLHSLRIGAATTLAAGG 831
F C AQ +GN I+ KLA++K+FHR +EL T +L L+GI+R+ PRR + P++ L + R+LW + + +F + R E +CL+ +V F +K ++ AT V + G K DQ +G++ R+ +G V L L + E + + L ++A+++ + AG P+ HS+RIG AT L AGG
Sbjct: 670 FATLCWAQGANSRREGNQYSTINLKLASIKWFHRRYQDIELKTTPRLALL-LQGIKRL----SHPRRKKQPITMPFLRLLHRNLDLSRPRQRLLWGSILIGFFFMLRRSEYLVVE--NTRHFYCLKDRNVFF--SDKHGKQVNQSSATSVTIGLEGAKNDQYGRGAW-----------RTMHASGDQIVCPLRGLRHIKKARKELGMIADVHLCGN-----LSSQDMNRAIKRTAKLAGVPPSCYATHSVRIGGATALVAGG 906 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig19.195.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig19.195.1 >prot_P-littoralis_Contig19.195.1 ID=prot_P-littoralis_Contig19.195.1|Name=mRNA_P-littoralis_Contig19.195.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=123bp MVRVRFRGHKGDQTEQGSYIVRVRDIAHGRRSAVGAGGGAVAVLVELMTCback to top mRNA from alignment at P-littoralis_Contig19:881641..882498- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig19.195.1 ID=mRNA_P-littoralis_Contig19.195.1|Name=mRNA_P-littoralis_Contig19.195.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=858bp|location=Sequence derived from alignment at P-littoralis_Contig19:881641..882498- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig19:881641..882498- >mRNA_P-littoralis_Contig19.195.1 ID=mRNA_P-littoralis_Contig19.195.1|Name=mRNA_P-littoralis_Contig19.195.1|organism=Pylaiella littoralis U1_48|type=CDS|length=369bp|location=Sequence derived from alignment at P-littoralis_Contig19:881641..882498- (Pylaiella littoralis U1_48)back to top |