mRNA_P-littoralis_Contig19.189.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig19.189.1
Unique NamemRNA_P-littoralis_Contig19.189.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig19.189.1 vs. uniprot
Match: D7FRF8_ECTSI (DLH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRF8_ECTSI)

HSP 1 Score: 413 bits (1062), Expect = 7.690e-145
Identity = 196/236 (83.05%), Postives = 210/236 (88.98%), Query Frame = 1
Query:   16 GPPVACDYTPKGSIFKIGDVDAYFIGSGPKAIVVVYDIFGFSTQTKQVCDMLAAAGFNVAMPDFCKGNEWPVENFPPKDMSELGAWFGTTGKWETSILPTFTAAVAHMKENKGAEVVGVTGFCWGGMIAMKAASMGAEAEGGVKAAANVHAAMMTPGLAEDVKVPMLIMPSGEDPDHLPVKAVLDKKSFGDKCQYRRFDDMHHGFCAARGDWSIPEQATRAAEAIDMLVKFFGANL 723
            GPPVACDYTPKG+I KIGDVD YF+GSGPKA+VVVYDIFGFS Q KQVCDM AAAGFNVAMPDFCKGN WP+ENFPPKD SELGAWFGTTGKWETSI PTF  AVAHMKE++GAEVVGVTGFCWGGMIAMKAAS+  +AEGGVKA   VH AM++  LA+DVKVP+LIMPSGEDPDHLPVK VLDKK FGDKCQYRRFDDMHHGFCAARGDW+   QATRAAEAID  VKF+ ANL
Sbjct:   10 GPPVACDYTPKGTISKIGDVDTYFVGSGPKALVVVYDIFGFSPQLKQVCDMFAAAGFNVAMPDFCKGNPWPLENFPPKDRSELGAWFGTTGKWETSIRPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDPDAEGGVKAGGTVHPAMLSAELAQDVKVPVLIMPSGEDPDHLPVKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWANAVQATRAAEAIDAFVKFYTANL 245          
BLAST of mRNA_P-littoralis_Contig19.189.1 vs. uniprot
Match: A0A835Z8A5_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8A5_9STRA)

HSP 1 Score: 270 bits (690), Expect = 2.760e-88
Identity = 137/236 (58.05%), Postives = 160/236 (67.80%), Query Frame = 1
Query:   16 GPPVACDYTPKGSIFKIGDVDAYFIGSGPKAIVVVYDIFGFSTQTKQVCDMLAAAGFNVAMPDFCKGNEWPVENFPPKDMSELGAWFGTTGKWETSILPTFTAAVAHMKENKGAEVVGVTGFCWGGMIAMKAASMGAEAEGGVKAAANVHAAMMTPGLAEDVKVPMLIMPSGEDPDHLPVKAVLDKKSFGDKCQYRRFDDMHHGFCAARGDWSIPEQATRAAEAIDMLVKFFGANL 723
            GPP++ DY PKG+I  IGD + YF GSGP+AI +VYDIFG S Q KQVCD LA AGF+VAMPDF +G  W +ENFPPKD  E  AW G    ++  I P      AHM+E  GA+V G  GFCWGG IA KAA     A+G V A A VH A +TP L E V VP+ ++PSG+DPD  P+K VLDKK FG  C Y RF+DMHHGFCAARGDWS P  A RA+EA+ ML  F   NL
Sbjct:   10 GPPISSDYEPKGTIATIGDQEVYFSGSGPRAICIVYDIFGLSPQAKQVCDKLADAGFSVAMPDFARGQPWLLENFPPKDQGEFMAWVGKHD-FDAVIRPDMERVQAHMRETMGAKVFGAIGFCWGGSIATKAAC----AQGLVAAGAAVHYAFITPELVEGVCVPLCLLPSGDDPDTAPLKEVLDKKPFGAACVYHRFEDMHHGFCAARGDWSQPLIAQRASEAVAMLSDFMDKNL 240          
BLAST of mRNA_P-littoralis_Contig19.189.1 vs. uniprot
Match: A0A1Y1Y5T6_9FUNG (Alpha/beta-hydrolase n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y5T6_9FUNG)

HSP 1 Score: 185 bits (470), Expect = 5.420e-55
Identity = 99/238 (41.60%), Postives = 132/238 (55.46%), Query Frame = 1
Query:   19 PPVACDYTPKGSIFKIGDVDAYFIG--SGPKAIVVVYDIFGFSTQTKQVCDMLAAA-GFNVAMPDFCKGNEWPVENFPPKDMSELGAWFGTTGKWETSILPTFTAAVAHMKENKGAEVVGVTGFCWGGMIAMKAASMGAEAEGGVKAAANVHAAMMTPGLAEDVKVPMLIMPSGEDPDHLPVKAVLDKKSFGDKCQYRRFDDMHHGFCAARGDWSIPEQATRAAEAIDMLVKFFGANL 723
            PPV  DY PKGSI KI D+  YF+G     KA+VV+YDIFGF   TKQ CD+L     F VA+PDF +G  W      P+D   L  W  + G W+ +  P       H+  + G+   GV GFCWG  + + A       +G   AA+ +H +++    AE  + P+L++PS ++PD      +L KKSFG KC Y  FDDMHHGF AARGD++ P    R  EAI +   FF  N+
Sbjct:   11 PPVVSDYQPKGSIEKIDDLSVYFVGPKDAKKAVVVIYDIFGFHPNTKQFCDILGEKFNFRVALPDFFRGKPWDHTRMTPEDRPALMQWITSVGSWDNT-KPDLEKVKKHLSSS-GSTDFGVVGFCWGAKMGVLATR-----DGSFSAASLIHPSLLADEDAELAEAPILLIPSKDEPDLTKFVEILKKKSFGSKCSYHLFDDMHHGFAAARGDYNDPANVKRTTEAIQLTGDFFQNNV 241          
BLAST of mRNA_P-littoralis_Contig19.189.1 vs. uniprot
Match: A0A0L0HMK7_SPIPD (DLH domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HMK7_SPIPD)

HSP 1 Score: 186 bits (472), Expect = 5.860e-55
Identity = 100/239 (41.84%), Postives = 144/239 (60.25%), Query Frame = 1
Query:   19 PPVACDYTPKGSIFKIGDVDAYFIGS-GPKAIVVVYDIFGFSTQTKQVCDMLAAAGFNVAMPDFCKGNEWPVENFP---PKDMSELGAWFGTTGKWETSILPTFTAAVAHMKENKGAEVVGVTGFCWGGMIAMKAASMGAEAEGGVKAAANVHAAMMTPGLAEDVKVPMLIMPSGEDPDHLPVKAVLDKKSFGDKCQYRRFDDMHHGFCAARGDWSIPEQATRAAEAIDMLVKFFGANL 723
            PP A +Y PKG +  +GD+  YF+G  G +AI+++YDIFGF   T Q  D LAA GF VA PDF +GN WP+E  P   P+ M+ L          E+ +L    +   +++ N GAE +G  GFCWG + A++A       EG V A+A  H + +T  + +DVK P+ ++PS ++PD +P+   L +K F DK  + RFDDMHHG+CAAR D+S P  A R+ EA+ ++ +FF   L
Sbjct:   36 PPFASNYQPKGQVSTVGDLPTYFVGEKGKRAIILIYDIFGFHPNTHQFADELAAKGFFVAEPDFYRGNPWPLEKVPIQLPELMAHLEQHVP-----ESRMLADIGSVCRYLRSN-GAESIGTLGFCWGAIYAIRA-----NVEGLVDASAAAHPSRLTVEIVKDVKGPLALLPSKDEPDLIPLMEALKEKPFVDKNVHVRFDDMHHGWCAARSDYSNPANARRSREALQIMARFFDETL 263          
BLAST of mRNA_P-littoralis_Contig19.189.1 vs. uniprot
Match: L8H284_ACACA (Dienelactone hydrolase family protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H284_ACACA)

HSP 1 Score: 182 bits (463), Expect = 6.730e-54
Identity = 98/236 (41.53%), Postives = 142/236 (60.17%), Query Frame = 1
Query:   19 PPVACDYTPKGSIFKIGDVDAYFIG--SGPKAIVVVYDIFGFSTQTKQVCDMLAAAGF-NVAMPDFCKGNEWPVENFPPKDMSELGAWFGTTGKWETSILPTFTAAVAHMKENKGAEVVGVTGFCWGGMIAMKAASMGAEAEGGVKAAANVHAAMMTPGLAEDVKVPMLIMPSGEDPDHLPVKAVLDKKS--FGDKCQYRRFDDMHHGFCAARGDWSIPEQATRAAEAIDMLVKFF 711
            PPV  +Y P+GS+ ++G ++ Y +G      AIV +YDIFGF   TKQ CD++A+A    V +PDF +G  W  E     D SEL  W GT G WE  I P+  A  A  ++ +GA+ + + GFCWG  +A  AA  G+       AAA +H +  TP  A+ ++VP++ +P+ ++PD +P    L + S    +K +++RFDD+HHGFCAARGDWS   QA RA EAI ++  F+
Sbjct:   11 PPVKSEYAPQGSVVEVGGIEVYSVGPSDAKAAIVGIYDIFGFHNNTKQFCDLVASATHARVLLPDFFRGAPWTAEKLETHDRSELLKWIGTEGSWE-KIQPSLAATTAFAQK-EGAQKIALFGFCWGAKMAWHAAQDGST----YAAAAFIHPSFFTPDDAKFLQVPIINLPTKDEPDMVPYMEALKEASPALHEKSEHKRFDDVHHGFCAARGDWSDELQAQRANEAIKLVANFY 240          
BLAST of mRNA_P-littoralis_Contig19.189.1 vs. uniprot
Match: A0A836BBU2_9CHLO (DLH domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836BBU2_9CHLO)

HSP 1 Score: 181 bits (458), Expect = 3.700e-53
Identity = 104/234 (44.44%), Postives = 129/234 (55.13%), Query Frame = 1
Query:   16 GPPVACDYTPKGSIFKIGDVDAYFIGSGPKAIVVVYDIFGFS-TQTKQVCDMLAAAGFNVAMPDFCKGNEWPVENFPPKDMSELGAWFGTTGKWETSILPTFTAAVAHMKENKGAEVVGVTGFCWGGMIAMKAASMGAEAEGGVKAAANVHAAMM--TPGLAEDVKVPMLIMPSGEDPDHLPVKAVLDKKSFGDKCQYRRFDDMHHGFCAARGDWSIPEQATRAAEAIDMLVKF 708
            G PV   Y PKG+  K G  D Y  G+G   +V+V DIFGF   Q  QV D  A AGFNV   D   G  W ++ FPPK   +   W G  G W+  + P   AAVA +KE  GA   G  GFCWG  IAM+A   G EA          H A+       AE V+ P++++P+  D D  PVKAVLD++ +G KC Y+RFDD  HGF AARGDWS PE A  A +AI ++  F
Sbjct:   11 GAPVVSSYEPKGTFTKAGSTDVYRSGAGALGLVIVPDIFGFGHKQVFQVADRFAEAGFNVCAIDPFHGKPWTMDKFPPKPEHDFMGWIGREGSWQ-KLQPQVAAAVAKLKE-AGATKFGCIGFCWGVSIAMQA---GQEAT--FSGVGGAHPALFGKDAAFAEKVQCPVVLLPAQGDADTAPVKAVLDRRPYGSKCVYQRFDDQTHGFVAARGDWSKPEVAAAAGKAIGIMADF 237          
BLAST of mRNA_P-littoralis_Contig19.189.1 vs. uniprot
Match: A0A2K3CV50_CHLRE (DLH domain-containing protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3CV50_CHLRE)

HSP 1 Score: 176 bits (446), Expect = 2.590e-51
Identity = 103/234 (44.02%), Postives = 126/234 (53.85%), Query Frame = 1
Query:   16 GPPVACDYTPKGSIFKIGDVDAYFIGSGPKAIVVVYDIFGFS-TQTKQVCDMLAAAGFNVAMPDFCKGNEWPVENFPPKDMSELGAWFGTTGKWETSILPTFTAAVAHMKENKGAEVVGVTGFCWGGMIAMKAASMGA--EAEGGVKAAANVHAAMMTPGLAEDVKVPMLIMPSGEDPDHLPVKAVLDKKSFGDKCQYRRFDDMHHGFCAARGDWSIPEQATRAAEAIDMLVKF 708
            G PV  DY PKG+  K G  D Y  GSG   +V+V DIFGF   Q  QV D  A AGFNV   D   G  W  + FPPK   +   W      W+  + P   AAVA +KE  GA   G  GFCWG  IAM+A   G      GG   A   H A      AE V+ P++++P+  D D  PV+ VLDK+ +G KC Y+RFDD  HGF AARGDW+ PE A  A +AI ++  F
Sbjct:   11 GAPVVSDYEPKGTFTKAGSTDVYHSGSGALGVVIVPDIFGFGHKQVFQVADRFADAGFNVCAIDPFHGKPWTKDRFPPKPEHDFMGWLSREASWD-KLKPQIDAAVAKLKEG-GASKFGCIGFCWGVSIAMQAGQDGHTFSGVGGAHPALFGHDA----DFAEKVQCPVVLLPAQGDADTGPVQKVLDKRPYGSKCVYQRFDDQTHGFVAARGDWTKPEVAAAAGKAIGIMTDF 238          
BLAST of mRNA_P-littoralis_Contig19.189.1 vs. uniprot
Match: A0A835W382_CHLIN (DLH domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835W382_CHLIN)

HSP 1 Score: 176 bits (446), Expect = 2.590e-51
Identity = 102/234 (43.59%), Postives = 125/234 (53.42%), Query Frame = 1
Query:   16 GPPVACDYTPKGSIFKIGDVDAYFIGSGPKAIVVVYDIFGFS-TQTKQVCDMLAAAGFNVAMPDFCKGNEWPVENFPPKDMSELGAWFGTTGKWETSILPTFTAAVAHMKENKGAEVVGVTGFCWGGMIAMKAASMGAEAEGGVKAAANVHAAMMTPGL--AEDVKVPMLIMPSGEDPDHLPVKAVLDKKSFGDKCQYRRFDDMHHGFCAARGDWSIPEQATRAAEAIDMLVKF 708
            G PV  +Y PKG+  K G  D Y  GSG   +V++ DIFGF   Q  QV D  A AGFNV   D   G  W ++ FPPK   +   W G    W+  + P   AAVA +K   GA   G  GFCWG  IAM A   G    G        H A+    L  AE V+ P++++P+  D D  PVK VLDK+ +G KC Y+RFDD  HGF AARGDWS PE A  A  AI ++  F
Sbjct:   11 GAPVVSNYEPKGTFEKAGSADVYRSGSGALGVVIIPDIFGFGHKQVFQVADRFAEAGFNVCAIDPFHGKPWTMDRFPPKPEHDFKGWLGREAGWD-KLKPQVDAAVAKLKA-AGATKFGCIGFCWGVSIAMAAGQDGHTFSG----VGGAHPALFGHDLDYAEKVQCPVVLLPAQGDADTAPVKKVLDKRPYGTKCVYQRFDDQTHGFVAARGDWSKPEVAAAAGRAIGLMADF 238          
BLAST of mRNA_P-littoralis_Contig19.189.1 vs. uniprot
Match: A0A1D2MEH3_ORCCI (Putative AIM2 family protein C30D10.14 n=1 Tax=Orchesella cincta TaxID=48709 RepID=A0A1D2MEH3_ORCCI)

HSP 1 Score: 175 bits (444), Expect = 5.340e-51
Identity = 97/239 (40.59%), Postives = 140/239 (58.58%), Query Frame = 1
Query:   19 PPVACDYTPKGSIFKIGD-VDAYFI-GSGPKAIVV-VYDIFGFSTQTKQVCDMLAAAG-FNVAMPDFCKGNEWPVENFPPKDMSELGAWFGTTGKWETSILPTFTAAVAHMKENKGAEVVGVTGFCWGGMIAMKAASMGAEAEGGVKAAANVHAAMMTPGLAEDVKVPMLIMPSGEDPDHLPVKAVLDKKSFGDKCQYRRFDDMHHGFCAARGDWSIPEQATRAAEAIDMLVKFFGANL 723
            PPV+ DY  +GS F +GD +  Y      PK +++  YDIFG+   TKQ  D L + G F VAMPDF +G  + ++NFPPKD SE+  +  TTG W+  +       + H K+ +GA   G+ GFCWGG +++K    G      +KAAA +H A +    AE  K P+L  PS ++PD LP+  ++ K+   +  ++ RFDDM HGF AARGDW + +Q  RA +AI ++  FF  +L
Sbjct:   11 PPVSSDYQAQGSEFTLGDDLKIYETKNKSPKIVLICAYDIFGYHPNTKQFADQLNSCGIFRVAMPDFFRGKPFSLDNFPPKDPSEIMNFVSTTGSWDDVVKKDLQNVIEHYKK-EGAVSFGIFGFCWGGKMSIK----GVSEVDDIKAAALLHPAFVDTSDAEAAKGPVLFCPSKDEPDMLPLYEIVKKRLGEENAEHHRFDDMFHGFAAARGDWKVEDQRKRADQAIALVHNFFKKHL 244          
BLAST of mRNA_P-littoralis_Contig19.189.1 vs. uniprot
Match: A0A1D2MXF0_ORCCI (Putative AIM2 family protein C30D10.14 n=1 Tax=Orchesella cincta TaxID=48709 RepID=A0A1D2MXF0_ORCCI)

HSP 1 Score: 174 bits (442), Expect = 2.450e-50
Identity = 93/241 (38.59%), Postives = 133/241 (55.19%), Query Frame = 1
Query:   10 VKGPPVACDYTPKGSIFKIGDVDAYFIGS--GPKAIVVVYDIFGFSTQTKQVCDMLAAA-GFNVAMPDFCKGNEWPVENFPPKDMSELGAWFGTTGKWETSILPTFTAAVAHMKENKGAEVVGVTGFCWGGMIAMKAASMGAEAEGGVKAAANVHAAMMTPGLAEDVKVPMLIMPSGEDPDHLPVKAVLDKKSFGDKCQYRRFDDMHHGFCAARGDWSIPEQATRAAEAIDMLVKFFGANL 723
            +KG  +  +YTP+G+ ++IG++  Y   +    + ++ VYDIFG ST  KQV D +A    F V MPDF +G  W   NFPP++  ++  W    G W+  +     + +   +  +    VG+ G CWGG +A  AA+   E    +K A  VH A +    A+ VK PM ++P+  +PD LP   VL K+ FGD C +RRFDDM HGF  ARGD++ P    R  E ID+L  FF  NL
Sbjct:   38 LKGKAIEANYTPRGAEYEIGNLTVYESQNREAKRVLIAVYDIFGLSTNMKQVVDSIAELYDFRVVMPDFFRGVYWDENNFPPENPEDMANWLNRNGSWDNIVKWDVMSVINSFQTTQNISEVGIFGMCWGGKVATLAATEIPE----IKVAGLVHPASVNNSEADGVKAPMYLLPTANEPDMLPFYEVL-KQKFGDNCGHRRFDDMFHGFAGARGDFNNPLNVQRVEEVIDILGIFFNKNL 273          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig19.189.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRF8_ECTSI7.690e-14583.05DLH domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835Z8A5_9STRA2.760e-8858.05Alpha/Beta hydrolase protein n=1 Tax=Tribonema min... [more]
A0A1Y1Y5T6_9FUNG5.420e-5541.60Alpha/beta-hydrolase n=1 Tax=Basidiobolus meristos... [more]
A0A0L0HMK7_SPIPD5.860e-5541.84DLH domain-containing protein n=2 Tax=Spizellomyce... [more]
L8H284_ACACA6.730e-5441.53Dienelactone hydrolase family protein n=1 Tax=Acan... [more]
A0A836BBU2_9CHLO3.700e-5344.44DLH domain-containing protein n=1 Tax=Chlamydomona... [more]
A0A2K3CV50_CHLRE2.590e-5144.02DLH domain-containing protein n=2 Tax=Chlamydomona... [more]
A0A835W382_CHLIN2.590e-5143.59DLH domain-containing protein n=1 Tax=Chlamydomona... [more]
A0A1D2MEH3_ORCCI5.340e-5140.59Putative AIM2 family protein C30D10.14 n=1 Tax=Orc... [more]
A0A1D2MXF0_ORCCI2.450e-5038.59Putative AIM2 family protein C30D10.14 n=1 Tax=Orc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig19contigP-littoralis_Contig19:835995..838674 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FRF8
PFAMsDLH
Model size726
Max annot lvl2759|Eukaryota
KEGG rclassRC01018,RC01906,RC01907,RC02441,RC02467,RC02468,RC02674,RC02675,RC02686
KEGG koko:K01061,ko:K14515,ko:K18272
KEGG ReactionR03893,R05510,R05511,R06835,R06838,R08120,R08121,R09136,R09220,R09222
KEGG Pathwayko00361,ko00364,ko00623,ko01100,ko01110,ko01120,ko01130,ko04016,ko04075,map00361,map00364,map00623,map01100,map01110,map01120,map01130,map04016,map04075
Hectar predicted targeting categoryother localisation
Exons6
Evalue1.26e-145
EggNOG OGsCOG0412@1|root,KOG3043@2759|Eukaryota
Ec32 ortholog descriptionAlpha/Beta hydrolase fold
Ec32 orthologEc-08_000790.1
EC3.1.1.45
DescriptionDienelactone hydrolase family
Cds size726
COG categoryQ
BRITEko00000,ko00001,ko01000,ko04121,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig19.189.1prot_P-littoralis_Contig19.189.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig19 835995..838674 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789913.881039-CDS-P-littoralis_Contig19:835994..8360791680789913.881039-CDS-P-littoralis_Contig19:835994..836079Pylaiella littoralis U1_48CDSP-littoralis_Contig19 835995..836079 -
1680789913.8952057-CDS-P-littoralis_Contig19:836581..8367241680789913.8952057-CDS-P-littoralis_Contig19:836581..836724Pylaiella littoralis U1_48CDSP-littoralis_Contig19 836582..836724 -
1680789913.906425-CDS-P-littoralis_Contig19:837215..8374591680789913.906425-CDS-P-littoralis_Contig19:837215..837459Pylaiella littoralis U1_48CDSP-littoralis_Contig19 837216..837459 -
1680789913.9188838-CDS-P-littoralis_Contig19:837832..8379301680789913.9188838-CDS-P-littoralis_Contig19:837832..837930Pylaiella littoralis U1_48CDSP-littoralis_Contig19 837833..837930 -
1680789913.9280996-CDS-P-littoralis_Contig19:838187..8382521680789913.9280996-CDS-P-littoralis_Contig19:838187..838252Pylaiella littoralis U1_48CDSP-littoralis_Contig19 838188..838252 -
1680789913.938669-CDS-P-littoralis_Contig19:838583..8386741680789913.938669-CDS-P-littoralis_Contig19:838583..838674Pylaiella littoralis U1_48CDSP-littoralis_Contig19 838584..838674 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig19.189.1

>prot_P-littoralis_Contig19.189.1 ID=prot_P-littoralis_Contig19.189.1|Name=mRNA_P-littoralis_Contig19.189.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=242bp
MPLVKGPPVACDYTPKGSIFKIGDVDAYFIGSGPKAIVVVYDIFGFSTQT
KQVCDMLAAAGFNVAMPDFCKGNEWPVENFPPKDMSELGAWFGTTGKWET
SILPTFTAAVAHMKENKGAEVVGVTGFCWGGMIAMKAASMGAEAEGGVKA
AANVHAAMMTPGLAEDVKVPMLIMPSGEDPDHLPVKAVLDKKSFGDKCQY
RRFDDMHHGFCAARGDWSIPEQATRAAEAIDMLVKFFGANL*
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mRNA from alignment at P-littoralis_Contig19:835995..838674-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig19.189.1 ID=mRNA_P-littoralis_Contig19.189.1|Name=mRNA_P-littoralis_Contig19.189.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2680bp|location=Sequence derived from alignment at P-littoralis_Contig19:835995..838674- (Pylaiella littoralis U1_48)
ATGCCGCTTGTGAAAGGCCCTCCCGTAGCGTGTGACTACACGCCCAAGGG CAGCATTTTCAAAATCGGCGACGTCGACGCGTACTTCATCGGTCAGTACC TCACGTCATGGCGTACAGCAGTACACGGCACCCAATAAGCATCGATTGTC GTGCGTTAGGAATGACGACTCGATTTTTCAGGCAAACGCCCAAAACAATT GGGCATAATTATTCTGAAATAAGCGGAGGAGGCGCACTTCTAAGCGAAGA AACGTAGCCTCGACGCCAAACAAGCGTGCCTCACGTGGGCGTCCTGCACA GGTCTGTAGCAGGACAGCATTCCCCATTTTTCTTGAGAAATGAAGCCTCA ATTTCTTCCACGAATGGCGCGTTTTCGTGTGACGTCCTGTGCTTCACCCA TGTCCCTCATCCATCCCGCCAGGCTCTGGGCCGAAGGCTATCGTGGTTGT GTACGACATCTTCGGGTTTAGCACCCAGACAAAGCAGGTACACGGCCAAA TGGCTTCGGTTCGATGCTGCCCCCAACATATTCACTCTTCCACGTTTGCG CACAAGGGAGGCACTCAAGCAGTTGCGGGGTAGGTGCAGCGTACGTCGCA ATGATTTCGTATTTCCATTTCACGGTGCAGCAGTAAGCTGCACTGCAAGA GAGCGCGTTTCAGCAAAGCGTTGCCGGTGGCATTTTATTTTTTCGCACTG TCTGGTGCTGCGCTGTGTCGAACTTTTTCGCCGCTATTGAAAAGGTCTGC GATATGCTTGCGGCCGCCGGATTTAACGTGGCCATGCCGGACTTCTGCAA GGGGAACGAATGGCCAGTGGAAAACTTCCCCCCCAAAGACATGTCAGTAC GAAACACAAGAAGCAGAAGGTTAAGGTTTATGATCGTAGGTCCCCCCGTG GGACGTTTTGCCTCTGGGACTGCGGTAGACACCCGGGTGTGTTTCGCCGT CGCTGTACTCCACAAGCCTCCGCCGTGGCGGCTACTTGAAAAAGTCTGCA ATTTGCGCGAAGATACTCTAACAGGCGTCTCTAATATCCCTCGTTTACGA TGTTTCCCTTGCAGGCTACCGAAAGCGCAATGTTGTACCGTAGTCTCTTC GTGGGCAGTCGTTTTGTTTTTCGGAAGCATTTTTCAGCAACGTCGTGTTT TGCGGAACTTCCTCTCCGCGTTCGCGCCGCGCCTTCACCCTTGTGCACAT AAACAACAACGCCAGGAGCGAACTGGGGGCATGGTTCGGCACAACCGGCA AGTGGGAGACATCAATCCTCCCCACCTTCACTGCAGCCGTTGCCCACATG AAGGAGAACAAAGGGGCCGAGGTTGTCGGAGTGACCGGGTTCTGTTGGGG CGGCATGATCGCCATGAAGGCCGCGTCAATGGGGGCTGAGGCGGAGGGGG GCGTTAAGGCTGCGGCTAACGTGCACGCCGCGATGATGACGCCCGGGCTG GCGGAGGACGTGAGTAGTGTGACGGGCAGCAAGCATGGTTCGTTCAATGG GCAGCATATGTAGAGGGATGAATATATTTTTAGAAAAGGGAGAGACAAGG CCAGAGAGAGATAGAGCGCGTGTGGGAGGGGGAGGGCACAAGAGGAAATA ATGTACACGGACCGCCACATTTTTTTCAGACTCAATGTTTGTCTTATTCG AACCTCCGATCGTAATTGAACAATTTTTTCCACGTCTGATCCTAACAAAA GCGGCATACCGGTATCATTGCCGGCCTCGGCGAGCTCGTTTTTTTCCTAC GAAAATGTTTAACAGCTTGCCCTCACCTCACACCCGTTGCCAGTGACTAT TAGTTTCGCGTTGAAATACAGTCAGGCAGGCGGCTAGGCGGGCGGCTAGG CTAACGCTTGGACACCAATCATGTCCTGCACACCTGATGTGCCGTTCGTC TTACACCACTCTTTTTGCTCCACCGTACTGTAATTTGTTCTGTTCCGCAG GTGAAGGTGCCCATGTTGATCATGCCGTCAGGGGAGGACCCCGACCACCT CCCCGTGAAAGCGGTTTTGGACAAGAAGTCATTCGGCGACAAATGCCAGT ACCGCCGTTTCGACGACATGCATCACGGCTTCTGCGCTGCCAGGTATCTA CTGCTTTTGCCGCAGGCTATTTGACGTAGGAAGAACGAGAAACCGCTGTC GCGCAGAGTTCGCCTGCCTTGGGGGCGGGGGGGGGGTTCCTGACCCCCTG AGTATCATATTCCGATTTATGATGTATGGTTGTGTCCAGGTCTTGCGTCG GTGACCCCTCTTACTGCAATTTTCTTCGTCAACGAAGAAAAGAGCGGTAC TTGCACAACGTTTTCTAGCGTAAGCTGCCACGTGCACTTTCCTACGTGGT GAATTCACGACCGGAAAGGCAGGGGTTTAAGACCAGCTCGTGTCTACTGT AGTGAGTGGGAATTCGTGTTTCTTGATGACTGAGACATCATCTACTGCTG CACGGTGGGGTTCGTGTTTCCTCGAGTCAAGTGAATGGTCGGGTTGTGAT CCTACGGCAATTTCGCGCGTAGACAATTTTCTATGGTAGAGCTAATCAGC GCCTTATTCCCTGTTTTGAATGTTGCCATTGAATCGCCACGACAGGGGTG ACTGGAGCATCCCTGAGCAAGCCACGAGGGCCGCCGAAGCCATCGACATG CTTGTAAAGTTTTTCGGCGCTAATCTCTAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig19:835995..838674-

>mRNA_P-littoralis_Contig19.189.1 ID=mRNA_P-littoralis_Contig19.189.1|Name=mRNA_P-littoralis_Contig19.189.1|organism=Pylaiella littoralis U1_48|type=CDS|length=726bp|location=Sequence derived from alignment at P-littoralis_Contig19:835995..838674- (Pylaiella littoralis U1_48)
ATGCCGCTTGTGAAAGGCCCTCCCGTAGCGTGTGACTACACGCCCAAGGG
CAGCATTTTCAAAATCGGCGACGTCGACGCGTACTTCATCGGCTCTGGGC
CGAAGGCTATCGTGGTTGTGTACGACATCTTCGGGTTTAGCACCCAGACA
AAGCAGGTCTGCGATATGCTTGCGGCCGCCGGATTTAACGTGGCCATGCC
GGACTTCTGCAAGGGGAACGAATGGCCAGTGGAAAACTTCCCCCCCAAAG
ACATGAGCGAACTGGGGGCATGGTTCGGCACAACCGGCAAGTGGGAGACA
TCAATCCTCCCCACCTTCACTGCAGCCGTTGCCCACATGAAGGAGAACAA
AGGGGCCGAGGTTGTCGGAGTGACCGGGTTCTGTTGGGGCGGCATGATCG
CCATGAAGGCCGCGTCAATGGGGGCTGAGGCGGAGGGGGGCGTTAAGGCT
GCGGCTAACGTGCACGCCGCGATGATGACGCCCGGGCTGGCGGAGGACGT
GAAGGTGCCCATGTTGATCATGCCGTCAGGGGAGGACCCCGACCACCTCC
CCGTGAAAGCGGTTTTGGACAAGAAGTCATTCGGCGACAAATGCCAGTAC
CGCCGTTTCGACGACATGCATCACGGCTTCTGCGCTGCCAGGGGTGACTG
GAGCATCCCTGAGCAAGCCACGAGGGCCGCCGAAGCCATCGACATGCTTG
TAAAGTTTTTCGGCGCTAATCTCTAG
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