mRNA_P-littoralis_Contig19.188.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig19.188.1 vs. uniprot
Match: D7FRF5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRF5_ECTSI) HSP 1 Score: 358 bits (919), Expect = 1.690e-122 Identity = 231/263 (87.83%), Postives = 252/263 (95.82%), Query Frame = 1
Query: 1 MSSGD--GLQQVSKIVNSFFNKPETLAFREPVNPKAMGIPDYPQIVKNPMDLGTVRSKLDEGLYDRAEDVARDVRLIWSNCILYNSPGSEFGLLAAGLAKKFEERFSKIKIAEKERQRKPTSKSEPVSTKAPTLEEKVRFTYDLYRTTKINVGQVMEQIDARCPQALKSPAEDEVELNVDMLDPLTFRVVERLIRQALQGGPSSATASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--KNTDGESRPKKQRS 777
MSSGD GLQQVSKIVNSFFNKPETLAFREPVNPKAMGIPDYPQIVKNPMDLGTVR+KL+EG Y+RAEDVARDVRLIWSNCILYNSPGSEFGLLAAGLAKKFEERFS++K AEKER RKP++KSEPV+TKAPTL+EKVRFTYDLYRTTK++VGQVMEQ+DARCPQALKSPA+DEVELNVDMLDPLTFR VERL+RQ+LQG +SAT++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KN+DGE+RPKKQR+
Sbjct: 1 MSSGDSNGLQQVSKIVNSFFNKPETLAFREPVNPKAMGIPDYPQIVKNPMDLGTVRTKLEEGRYERAEDVARDVRLIWSNCILYNSPGSEFGLLAAGLAKKFEERFSRVKTAEKERDRKPSAKSEPVNTKAPTLDEKVRFTYDLYRTTKVDVGQVMEQVDARCPQALKSPADDEVELNVDMLDPLTFRFVERLLRQSLQGN-ASATSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKNSDGETRPKKQRA 262
BLAST of mRNA_P-littoralis_Contig19.188.1 vs. uniprot
Match: A0A8J2WSU6_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WSU6_9STRA) HSP 1 Score: 172 bits (437), Expect = 3.970e-50 Identity = 88/208 (42.31%), Postives = 136/208 (65.38%), Query Frame = 1
Query: 1 MSSGDGLQQVSKIVNSFFNKPETLAFREPVNPKAMGIPDYPQIVKNPMDLGTVRSKLDEGLYDRAEDVARDVRLIWSNCILYNSPGSEFGLLAAGLAKKFEERFSKIKIAEKERQRKPTSKSEPVSTKAPTLEEKVRFTYDLYRTTKINVGQVMEQIDARCPQAL-KSPAEDEVELNVDMLDPLTFRVVERLIRQAL-QGGPSSATAS 618
M+ DG+ ++KI+N+ +P+++ FREPV+ + +G+ DYPQ++ PMDL TV+ ++ Y D A D+RLIW+NC YN GS+F LA G +K+FEERFSK+K P E + T AP LEEK RF++++YR + +G ++E++DA+CP A+ KS ++DE+E+N+D +DP TF ++R +RQ L Q P A+
Sbjct: 1 MTQADGMAAMTKIINTLMQRPDSVPFREPVDWRGLGLYDYPQVIAKPMDLTTVKQTIERQGYKSVNDCADDIRLIWNNCKKYNQDGSDFYNLADGFSKRFEERFSKVKAEN------PALDEEEL-THAPDLEEKTRFSHNIYRIKQEELGVLVEKLDAKCPDAIDKSTSDDEIEINIDQIDPRTFHDLDRYVRQCLSQSNPKKKKAA 201
BLAST of mRNA_P-littoralis_Contig19.188.1 vs. uniprot
Match: A0A7S2PE54_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PE54_9STRA) HSP 1 Score: 157 bits (396), Expect = 2.370e-43 Identity = 91/219 (41.55%), Postives = 130/219 (59.36%), Query Frame = 1
Query: 4 SSGDGLQQVSKIVNSFFNKPETLAFREPVNPKAMGIPDYPQIVKNPMDLGTVRSKLDEGLYDRAEDVARDVRLIWSNCILYNSPGSEFGLLAAGLAKKFEERFSKIKI-------AEKERQRKPTSKSEPVST-------------KAPTLEEKVRFTYDLYRTTKINVGQVMEQIDARCPQALK----SPAEDEVELNVDMLDPLTFRVVERLIRQAL 588
S + L+++SK+V+S K +T FREPVN + + + DYP+I+K PMDLGTV+ KL+ Y+ A + A D+RLIWSNC+ YN GS+F LLA L++KFE+RF K++ A + K K K PTLEEK +F ++++ +G VM+ ID RCPQA++ AEDE+E+NVD LDP TF ++R I+ L
Sbjct: 9 SKQEALRKMSKLVSSMMTKSDTAPFREPVNWRELELWDYPKIIKRPMDLGTVKRKLESTQYETANECAEDIRLIWSNCMTYNQEGSDFYLLAQALSRKFEDRFRKVRAEYDVGGDAYDNTKSKSDGKGGSAENGSGSAAGGKMGDHKPPTLEEKTQFAGNIFKIGGDALGYVMQVIDLRCPQAIERGNNGAAEDELEINVDTLDPRTFAELDRFIQDKL 227
BLAST of mRNA_P-littoralis_Contig19.188.1 vs. uniprot
Match: B8BSQ7_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BSQ7_THAPS) HSP 1 Score: 155 bits (391), Expect = 3.440e-43 Identity = 86/179 (48.04%), Postives = 117/179 (65.36%), Query Frame = 1
Query: 22 QQVSKIVNSFFNKPETLAFREPVNPKAMGIPDYPQIVKNPMDLGTVRSKLDEGLYDRAEDVARDVRLIWSNCILYNSPGSEFGLLAAGLAKKFEERFSKIKIAEKERQRKPTSKSEPVSTKAPTLEEKVRFTYDLYRTTKINVGQVMEQIDARCPQAL-KSPAEDEVELNVDMLDPLTF 555
Q +SK+V+ F+ K + FREPV+ KA+G+ DYP +VK PMDLG V+ KL+E Y D A DVRLIW NC+ YN+ GS+F LLA +AKKFEE+F+K+ E K+ + PT E+K F LY+ TK +G V+ +DA+CP+AL K+ AEDEVE+NVD++ P F
Sbjct: 6 QAMSKLVSQFYAKADAEPFREPVDYKALGLVDYPLVVKKPMDLGQVKKKLNESKYKSIHDAADDVRLIWKNCMTYNADGSDFYLLAQTMAKKFEEKFAKLVEQFGEAAGDGGDKNGEDDYEDPTPEDKRTFAKLLYKITKEELGNVITDLDAKCPKALVKNSAEDEVEINVDVISPKIF 184
BLAST of mRNA_P-littoralis_Contig19.188.1 vs. uniprot
Match: A0A7S3JU45_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JU45_9STRA) HSP 1 Score: 152 bits (384), Expect = 3.740e-42 Identity = 72/191 (37.70%), Postives = 127/191 (66.49%), Query Frame = 1
Query: 19 LQQVSKIVNSFFNKPETLAFREPVNPKAMGIPDYPQIVKNPMDLGTVRSKLDEGLYDRAEDVARDVRLIWSNCILYNSPGSEFGLLAAGLAKKFEERFSKIKIAEKERQRKPTSKSEPVSTKAPTLEEKVRFTYDLYRTTKINVGQVMEQIDARCPQAL-KSPAEDEVELNVDMLDPLTFRVVERLIRQAL 588
++ + KIV+ + + + F EPV+ + +G+ DYP+++K PMDLGTV+ K++E Y A D+RL+WSNC YN GS+F LA L+K+FE++F+K+K + E + AP+LEEK +F++ +Y+ + +GQ++E+++ RCP+A+ K+P +DE+E+N+D +DP TFR +++ ++ +
Sbjct: 1 MEAMKKIVDKLMKRQDAVPFLEPVDWQGLGLVDYPKMIKKPMDLGTVKKKIEENEYASVHACAEDIRLVWSNCKKYNQDGSDFFNLAESLSKRFEDQFAKVKAED--------PMIEDDTEHAPSLEEKTKFSHMIYKIKQEELGQLVEKLEDRCPEAIDKTPNDDELEINIDAIDPKTFRELDKFVKACI 183
BLAST of mRNA_P-littoralis_Contig19.188.1 vs. uniprot
Match: A0A6G0WNJ5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WNJ5_9STRA) HSP 1 Score: 149 bits (376), Expect = 6.250e-41 Identity = 78/188 (41.49%), Postives = 123/188 (65.43%), Query Frame = 1
Query: 34 KIVNSFFNKPETLAFREPVNPKAMGIPDYPQIVKNPMDLGTVRSKLDEGLYDRAEDVARDVRLIWSNCILYNSPGSEFGLLAAGLAKKFEERFSKIKIAEKERQRKPTSKSEPVSTKAPTLEEKVRFTYDLYRTTKINVGQVMEQIDARCPQALKSPAEDEVELNVDMLDPLTFRVVERLIRQALQGG 597
++++ FF + AFRE VN + G+ DY Q+VK PMD+ TVR+KL +G Y + E+ A+D+RLIW NC LYN GS+ +A L+K F+ER ++K+ + P++KS S+ P+LEE++ F+ D+Y+ + ++G V+E ++ RCP+AL DE+ELNVD +D TF+ V+ I+ + GG
Sbjct: 11 EVLDEFFKMEASEAFRERVNWEEWGLYDYLQVVKTPMDMTTVRTKLSKGEYKKPEEFAKDMRLIWDNCKLYNQDGSDLWAVAHDLSKMFDERMKELKLDDG-----PSTKS---SSSEPSLEERIVFSQDIYKISSKDLGTVIEMLEERCPKALDRQNADELELNVDAIDTKTFKEVDAFIKDCVPGG 190
BLAST of mRNA_P-littoralis_Contig19.188.1 vs. uniprot
Match: A0A7R9VVT0_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VVT0_9STRA) HSP 1 Score: 149 bits (376), Expect = 6.810e-41 Identity = 81/191 (42.41%), Postives = 123/191 (64.40%), Query Frame = 1
Query: 28 VSKIVNSFFNKPETLAFREPVNPKAMGIPDYPQIVKNPMDLGTVRSKLDEGLYDRAEDVARDVRLIWSNCILYNSPGSEFGLLAAGLAKKFEERFSKIKIAEKERQRKPTSKSEPVSTKAPTLEEKVRFTYDLYRTTKINVGQVMEQIDARCPQAL-KSPAEDEVELNVDMLDPLTFRVVERLIRQALQGG 597
++K+V + K + FREPV+ K++G+ DYPQI+K PMDLG V+ K++ G Y D A DVRLIW NC+ YN+ GS+F +LA ++KKFE++F+K+ +K+ K + + S++ PTLEEK F LY+ +K +G+V+ +DA+C AL K+ AEDEVE+NVD + P F + ++ G
Sbjct: 11 MAKLVAQIYAKSDAEPFREPVDWKSLGLFDYPQIIKKPMDLGQVKRKIETGKYGAIHDAAEDVRLIWKNCMQYNADGSDFFILAQNMSKKFEDKFAKL---QKDLDSKSAANGKGNSSE-PTLEEKRTFAKLLYKISKEELGKVIVDLDAKCSTALTKNSAEDEVEINVDHISPTVFHELMNFVKSCADSG 197
BLAST of mRNA_P-littoralis_Contig19.188.1 vs. uniprot
Match: A0A7S2MY29_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MY29_9STRA) HSP 1 Score: 149 bits (375), Expect = 8.830e-41 Identity = 77/177 (43.50%), Postives = 116/177 (65.54%), Query Frame = 1
Query: 28 VSKIVNSFFNKPETLAFREPVNPKAMGIPDYPQIVKNPMDLGTVRSKLDEGLYDRAEDVARDVRLIWSNCILYNSPGSEFGLLAAGLAKKFEERFSKIKIAEKERQRKPTSKSEPVSTKAPTLEEKVRFTYDLYRTTKINVGQVMEQIDARCPQAL-KSPAEDEVELNVDMLDPLTF 555
+SK+V + K + FR+PV+ K +G+ DYPQI+K PMDLG V+ K++ G Y D A DVRLIW NC+ YN+ GS+F +LA +++KFE++F+K+ + + +S+ + PTLEEK F LY+ +K+ +G V+ ++D +CP AL K+ AEDEVE+NVD + P F
Sbjct: 9 MSKLVAQIYAKGDAEPFRDPVDWKLLGLFDYPQIIKKPMDLGQVKRKIESGKYGTIHDAAEDVRLIWKNCMQYNADGSDFYILAKNMSRKFEDKFTKLL-----KDQGSAGESKTKNATEPTLEEKRSFARSLYKISKVELGIVITELDKKCPAALTKNSAEDEVEINVDHISPAVF 180
BLAST of mRNA_P-littoralis_Contig19.188.1 vs. uniprot
Match: A0A1W0A9V6_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A9V6_9STRA) HSP 1 Score: 148 bits (374), Expect = 1.250e-40 Identity = 76/196 (38.78%), Postives = 125/196 (63.78%), Query Frame = 1
Query: 10 GDGLQQVSKIVNSFFNKPETLAFREPVNPKAMGIPDYPQIVKNPMDLGTVRSKLDEGLYDRAEDVARDVRLIWSNCILYNSPGSEFGLLAAGLAKKFEERFSKIKIAEKERQRKPTSKSEPVSTKAPTLEEKVRFTYDLYRTTKINVGQVMEQIDARCPQALKSPAEDEVELNVDMLDPLTFRVVERLIRQALQGG 597
G+ + S ++ FF + FRE VN + G+ DY Q+VK PMD+GTVR KL++G Y + ED A+D+RLIW NC LYN GS+ +A L+K F+E+ +K+ + P +KS S++ P+LE+++ F+ D+Y+ + ++G V+E +D RCP+AL DE++LN+D +D TF+ ++ +++ + GG
Sbjct: 3 GETKKLCSDVLEEFFQMENSEPFRERVNWEEWGLYDYLQVVKVPMDMGTVRVKLNKGEYKKPEDFAKDMRLIWDNCKLYNQDGSDLYAIAHSLSKLFDEKMKHLKLDDG-----PPTKS---SSRDPSLEDRIVFSQDIYKISSKDLGTVVEMLDERCPKALDKQNSDELDLNIDAIDAKTFKELDTFVKECIPGG 190
BLAST of mRNA_P-littoralis_Contig19.188.1 vs. uniprot
Match: A0A7S2UZN8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZN8_9STRA) HSP 1 Score: 148 bits (374), Expect = 2.250e-40 Identity = 80/192 (41.67%), Postives = 115/192 (59.90%), Query Frame = 1
Query: 4 SSGDGLQQVSKIVNSFFNKPETLAFREPVNPKAMGIPDYPQIVKNPMDLGTVRSKLDEGLYDRAEDVARDVRLIWSNCILYNSPGSEFGLLAAGLAKKFEERFSKIKIAEKERQRKPTSKSEPVSTKAPTLEEKVRFTYDLYRTTKINVGQVMEQIDARCPQALKSPAEDEVELNVDMLDPLTFRVVERLIR 579
S DGL Q+ KIV+ + + + FREPV+ + + I DYPQIVK PMDLGT++ KL+ G Y + A D+RL+W NC++YN GS++ LA L+KKFE++++K+ E S K PTLEEK+ F +YR G+V+ +D RCP L DE+E+ VD++DP TF V R ++
Sbjct: 36 SKQDGLTQMKKIVSYLMTRQDAVPFREPVDWRQLQIFDYPQIVKRPMDLGTIKKKLENGEYRTPAECAADIRLVWENCMIYNQDGSDYYRLAEKLSKKFEDKYAKVSNKE--------VSSAIDDDKVPTLEEKLLFEQMIYRLRAEQTGEVVLTLDQRCPDCLAKVDGDELEITVDVIDPRTFHDVFRTLQ 219 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig19.188.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig19.188.1 >prot_P-littoralis_Contig19.188.1 ID=prot_P-littoralis_Contig19.188.1|Name=mRNA_P-littoralis_Contig19.188.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=260bp MSSGDGLQQVSKIVNSFFNKPETLAFREPVNPKAMGIPDYPQIVKNPMDLback to top mRNA from alignment at P-littoralis_Contig19:830508..834581+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig19.188.1 ID=mRNA_P-littoralis_Contig19.188.1|Name=mRNA_P-littoralis_Contig19.188.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4074bp|location=Sequence derived from alignment at P-littoralis_Contig19:830508..834581+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig19:830508..834581+ >mRNA_P-littoralis_Contig19.188.1 ID=mRNA_P-littoralis_Contig19.188.1|Name=mRNA_P-littoralis_Contig19.188.1|organism=Pylaiella littoralis U1_48|type=CDS|length=780bp|location=Sequence derived from alignment at P-littoralis_Contig19:830508..834581+ (Pylaiella littoralis U1_48)back to top |