mRNA_P-littoralis_Contig19.179.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig19.179.1 vs. uniprot
Match: A0A6H5K573_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K573_9PHAE) HSP 1 Score: 524 bits (1350), Expect = 1.860e-181 Identity = 271/402 (67.41%), Postives = 312/402 (77.61%), Query Frame = 1
Query: 271 LLLDFTNPTNGSRVEGPNVKLHYKIFSTNADGIVDHELTRNEVRALAETSKVCFKLHGFNDPPEICAPLRVSPLTIRDALPAKWHTVTGLIKDAKTGQSLGVSDGGVSVFNNLNGYGVLDMCGESACLDSSDLRAAYFDYVYRHPNWNANWNAKVKTGTQPMTPSTLSIRAALAGVLSAFNIKSILDAPCGDLTWMPLVPGINNVRYTGVDIVDLAVKNNRKQFQLEGRADLAENAVAAAAAAGDAGGEDVEGVLAEQQIAEVGERGRGLKDPVFYTADLVEGVPASRDGKPFDLVFVRDLMVHLPARHNLRVIKNIQASGARFLMASTYVHADENSASESFVPPVGHNINLSLPPYCLPEPLAVFADESTARRDLRMGLWDLHQDSPLALSGSCSPMSATV 1476
L L FT+P NG+RVEGPNV LHYKIF+T + + ELT EVR L+ ++ VCFKLHGFND PEICAPLRV+ +TI+DALPAKWH VTG IKD TG+ LG+SDGGVSVFNNLNGYGVLDMCGESACLDS+ LR+AYFDYVYRHP+W + TG ++ ST SIR+ L+ V+SAFNIKS+LDAPCGDL+WMPLV GI NV+YTG DIV++AV+ NRK+F AD+ E E + ++IA RG GLKDP F ADLVE VPAS+DG PFDLVFVRDLMVHLPARHNL+VI+NIQASGARFLMASTYV ADEN SE+FVPP+GHNINLSLPPYCLPEP+AVF D+ST R DLRMGLWDLH+ SPLALSG CSP S V
Sbjct: 56 LHLGFTSPINGTRVEGPNVFLHYKIFNT----LENRELTSAEVRDLSVSTTVCFKLHGFNDVPEICAPLRVATVTIKDALPAKWHHVTGSIKDTSTGKLLGLSDGGVSVFNNLNGYGVLDMCGESACLDSNALRSAYFDYVYRHPSW---YGRIPLTGASKLS-STFSIRSGLSKVISAFNIKSMLDAPCGDLSWMPLVSGIQNVQYTGADIVEIAVETNRKKFG----ADITEIRD--------------EDLKVGREIAAAMRRGEGLKDPAFVVADLVESVPASQDGAPFDLVFVRDLMVHLPARHNLKVIQNIQASGARFLMASTYVEADENKLSETFVPPMGHNINLSLPPYCLPEPMAVFLDDSTKRTDLRMGLWDLHEHSPLALSGDCSPTSVAV 431
BLAST of mRNA_P-littoralis_Contig19.179.1 vs. uniprot
Match: D7FTE5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTE5_ECTSI) HSP 1 Score: 261 bits (668), Expect = 1.210e-78 Identity = 164/414 (39.61%), Postives = 227/414 (54.83%), Query Frame = 1
Query: 274 LLDFTNPTNGSR-VEGPNVKLHYKIFSTNADGIVDHELTRNEVRALAETS-KVCFKLHGFNDPPEICAPLRV-SPLTIRDALPAKWHTVTGLIK---------DAKTGQSLGVSDGGVSVFNNLNGYGV---LDMCGESACLDSSDLRAAYFDYVYRHPNWNANWNAKVKTGTQPMTPSTLSIRAALAGVLSAFNIKSILDAPCGDLTWMPLVPGINNVRYTGVDIVDLAVKNNRKQFQLEGRADLAENAVAAAAAAGDAGGEDVEGVLAEQQIAEVGERGRGLKDPVFYTADLVEGVPASRDGKPFDLVFVRDLMVHLPARHNLRVIKNIQASGARFLMASTYVHADENSASESFVPPVGHNINLSLPPYCLPEPLAVFADESTARRDLRMGLWDLHQDSPLALS-GSCSPMS 1467
+L F +P+NGS V G N+ L + + S+ I+ HE E+ AL E VC G PP CA L + L++ LP WHT+ + D+ ++ + VS + + G + MCGESACLDSS+ R+AYFD VYR W A+ ++G +T IR AL V+ + + SILDAPCGD TWMPLV GI+ VRY G DI V++NR++F +D G ++ +A GL + F ADLVE +P S DGKP+DL+FVRD+M+HL RHN+R+++NI+ASGARFLMAST V ++N +++F P +G +NLSLPPYCL P+A+++D R RMGLW+L PL S G C +S
Sbjct: 54 VLVFESPSNGSAAVYGTNIDLAFSLRSSREGRILTHE----EIEALREDGVSVCLAKKGDPRPPP-CALLSTDTTLSLHKPLPGMWHTIVATLHHEAATSAGDDSDEARAWAEAGDSVSTYAEIEGLSSTSSVSMCGESACLDSSEKRSAYFDNVYRMEYW-----AETRSGPGSTVHNTNRIRLALEEVIRSHGVTSILDAPCGDATWMPLVRGIDQVRYLGADISPSIVEDNRRKFSKL---------------------QDHSGGSGDEAVASA--NAGGLHEDSFIQADLVERIPPSMDGKPYDLIFVRDVMLHLAPRHNVRMLQNIEASGARFLMASTNVDGNDNWKADTFRPAIGLLVNLSLPPYCLRPPIALYSDAMPERPGQRMGLWELDPARPLVGSNGLCDHLS 434
BLAST of mRNA_P-littoralis_Contig19.179.1 vs. uniprot
Match: A0A6H5JDW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDW5_9PHAE) HSP 1 Score: 187 bits (476), Expect = 3.370e-52 Identity = 110/266 (41.35%), Postives = 156/266 (58.65%), Query Frame = 1
Query: 643 SACLDSSDLRAAYFDYVYRHPNWNANWNAKVKTGTQPMTPSTLSIRAALAGVLSAFNIKSILDAPCGDLTWMPLVPGINNVRYTGVDIVDLAVKNNRKQF-QLEGRADLAENAVAAAAAAGDAGGEDVEGVLAEQQIAEVGERGRGLKDPVFYTADLVEGVPASRDGKPFDLVFVRDLMVHLPARHNLRVIKNIQASGARFLMASTYVHADENSASESFVPPVGHNINLSLPPYCLPEPLAVFADESTARRDLRMGLWDLHQDSPL 1437
+A L S + Y+ R W A+ ++G +T IR AL V+ + + SILDAPCGD TWMPLV GI+ VRY GVDI V++NR++F +L+ + + + A+A+AG GL F ADLVE +P S DGKP+DL+F+RD+M+HL +HN+++++NI+ASGARFLMAST V ++N +++F P G +NLSLPPYCL P+A+++D R RMGLW+L PL
Sbjct: 30 TASLPISRATSLQLFYLSRMEYW-----AETRSGPGSTVHNTNRIRLALEEVIRSNGVTSILDAPCGDATWMPLVRGIDQVRYLGVDISPSVVEDNRRKFSKLQDHSGGSGDEAVASASAG------------------------GLHGASFIQADLVERIPPSMDGKPYDLIFLRDVMLHLARQHNVQMLQNIEASGARFLMASTNVDGNDNWKADTFRPADGLLVNLSLPPYCLRPPIALYSDAIPERPGQRMGLWELDPARPL 266
BLAST of mRNA_P-littoralis_Contig19.179.1 vs. uniprot
Match: A0A7S1HHD7_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HHD7_HEMAN) HSP 1 Score: 110 bits (276), Expect = 1.680e-24 Identity = 82/251 (32.67%), Postives = 114/251 (45.42%), Query Frame = 1
Query: 670 RAAYFDYVYRHPNWNANWNAKVKTGTQPMTPSTLSIRAALAGVLSAFNIKSILDAPCGDLTWMPLVPGINNVRYTGVDIVDLAVKNNRKQFQLEGRADLAENAVAAAAAAGDAGGEDVEGVLAEQQIAEVGERGRGLKDPVFYTADLVEGVPASRDGKPFDLVFVRDLMVHLPARHNLRVIKNIQASGARFLMASTYVHADENSASESFVPPVG-HNINLSLPPYCLPEPLAVFADESTARRDLRMGLWDL 1419
R F+ +Y +WNA + ++GT + +T S+RA L V+ F I SILDA CGD+ W LVPGI+ VRY GVDIV V+ NR++F G ++ F DLVEG +DLV RD ++HLP + + NI+A+GA+F ++ N+ S V P G HNINL P+ LP PL +E+ + LW L
Sbjct: 1 RKQVFEGIYETNHWNAQ---ETRSGTGSVVSATKSLRAFLHRVVEEFAITSILDAGCGDMNWQALVPGIDKVRYHGVDIVAAMVEANREKFAA-----------------------------------------LGWRNMSFAVHDLVEGAVEG----DYDLVMCRDTLIHLPHADVRKALHNIEATGAKFFLSHYDAGISVNTIS---VEPGGWHNINLLAHPFRLPAPLLT-VNETEKGDGSMLALWRL 199
BLAST of mRNA_P-littoralis_Contig19.179.1 vs. uniprot
Match: A0A5C7ZVD6_9FLAO (Class I SAM-dependent methyltransferase n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A5C7ZVD6_9FLAO) HSP 1 Score: 96.3 bits (238), Expect = 6.020e-19 Identity = 81/251 (32.27%), Postives = 116/251 (46.22%), Query Frame = 1
Query: 682 FDYVYRHPNWNANWNAKVKTGTQPMTPSTLSIRAALAGVLSAFNIKSILDAPCGDLTWMPLVPGINNVRYTGVDIVDLAVKNNRKQFQLEGRADLAENAVAAAAAAGDAGGEDVEGVLAEQQIAEVGERGRGLKDPVFYTADLVEGVPASRDGKPFDLVFVRDLMVHLPARHNLRVIKNIQASGARFLMASTYV-HADENSASESFVPPVGHNINLSLPPYCLPEPLAVFAD---ESTARR-DLRMGLWDL 1419
F ++ WN+ + +GT T+++ AL + F+IKSILD PCGDL WM VP ++ VRY G DIV+ + NR +F R +L E ++ ++ LKDP+ T DLV VRD MVHLP V++ I+ASG+R+L+A+T+ HA+ PV NL++ P+ LP PL + + E R D M LWDL
Sbjct: 41 FTLIHDRNYWNSQESV---SGTGSELGQTVALVHALPALFKEFDIKSILDVPCGDLNWMKEVP-LDGVRYIGGDIVEKLIHRNRARFTA--RPEL------------------------EFRVLDL------LKDPLPTT----------------DLVLVRDCMVHLPLADITTVLQRIKASGSRYLLATTFTRHAENRDIRMGDWRPV----NLTVAPFNLPTPLRLIDEGCMEGEGRYGDKAMALWDL 235
BLAST of mRNA_P-littoralis_Contig19.179.1 vs. uniprot
Match: A0A4V2FX40_9ACTN (Methyltransferase family protein n=2 Tax=Kribbella TaxID=182639 RepID=A0A4V2FX40_9ACTN) HSP 1 Score: 95.5 bits (236), Expect = 1.270e-18 Identity = 74/256 (28.91%), Postives = 114/256 (44.53%), Query Frame = 1
Query: 670 RAAYFDYVYRHPNWNANWNAKVKTGTQPMTPSTLSIRAALAGVLSAFNIKSILDAPCGDLTWMPLVPGINNVRYTGVDIVDLAVKNNRKQFQLEGRADLAENAVAAAAAAGDAGGEDVEGVLAEQQIAEVGERGRGLKDPVFYTADLVEGVPASRDGKP-FDLVFVRDLMVHLPARHNLRVIKNIQASGARFLMASTYVHADENSASESFVPPVGHNINLSLPPYCLPEPLAVFADESTARRDLRMGLWDLHQDSP 1434
R A F VY W++ + +GT +T+ IR L +L+ ++K++LDAPCGDL WM +P + +Y GVDIV ++ NR ++ G + F ADL ++D P DLV RD +VH+ + +++N +A+GA +L+ +TY + + N F +N+SLPP+ P PL F D + R+GLW L QD P
Sbjct: 40 REALFTQVYETSGWDSTESG---SGTGSELRATVDIRERLPEILTRLDVKTMLDAPCGDLNWMRHIP-LPVEKYHGVDIVASVIEKNRAEY--------------------------------------------GDEQRDFAVADL------TKDKLPEVDLVLCRDCLVHVSFQDAADILENFRATGAEWLVINTYANVERNH--NQFTGRNWRQLNMSLPPFNFPAPLESFPDGGEVDPN-RLGLWRL-QDLP 237
BLAST of mRNA_P-littoralis_Contig19.179.1 vs. uniprot
Match: A0A4R8CGY3_9ACTN (Uncharacterized protein n=1 Tax=Kribbella sp. VKM Ac-2573 TaxID=2512224 RepID=A0A4R8CGY3_9ACTN) HSP 1 Score: 95.1 bits (235), Expect = 1.730e-18 Identity = 72/256 (28.12%), Postives = 117/256 (45.70%), Query Frame = 1
Query: 670 RAAYFDYVYRHPNWNANWNAKVKTGTQPMTPSTLSIRAALAGVLSAFNIKSILDAPCGDLTWMPLVPGINNVRYTGVDIVDLAVKNNRKQFQLEGRADLAENAVAAAAAAGDAGGEDVEGVLAEQQIAEVGERGRGLKDPVFYTADLVEGVPASRDGKP-FDLVFVRDLMVHLPARHNLRVIKNIQASGARFLMASTYVHADENSASESFVPPVGHNINLSLPPYCLPEPLAVFADESTARRDLRMGLWDLHQDSP 1434
R A F +VY W++ A+ +GT +T+ IR L +L+ ++K++LDAPCGDL WM +P + +Y G+DIV ++ NR+++ G + F ADL ++D P DL+ RD +VH+ + +++N +A+GA++L+ +TY + + N F +N+ LPP+ P PL F D + R+GLW L QD P
Sbjct: 40 REALFTHVYETSGWDS---AESGSGTGSELRATVDIRERLPELLTRLDVKTMLDAPCGDLNWMRHIP-LPVDKYHGLDIVASVIEKNRQEY--------------------------------------------GNEQRDFAVADL------TKDKLPSVDLILCRDCLVHVSFQDAADILENFRATGAQWLVINTYANVERNH--NQFTGRNWRQLNMQLPPFNFPAPLESFPDGGEVDPN-RLGLWRL-QDLP 237
BLAST of mRNA_P-littoralis_Contig19.179.1 vs. uniprot
Match: UPI00168A2AE9 (class I SAM-dependent methyltransferase n=1 Tax=Oscillatoria sp. FACHB-1407 TaxID=2692847 RepID=UPI00168A2AE9) HSP 1 Score: 94.4 bits (233), Expect = 2.300e-18 Identity = 71/250 (28.40%), Postives = 109/250 (43.60%), Query Frame = 1
Query: 691 VYRHPNWNANW-NAKVKTGTQPMTPSTLSIRAALAGVLSAFNIKSILDAPCGDLTWMPLVPGINNVRYTGVDIVDLAVKNNRKQFQLEGRADLAENAVAAAAAAGDAGGEDVEGVLAEQQIAEVGERGRGLKDPVFYTADLV-EGVPASRDGKPFDLVFVRDLMVHLPARHNLRVIKNIQASGARFLMASTYVHADENS--ASESFVPPVGHNINLSLPPYCLPEPLAVFADEST---ARRDLRMGLWDL 1419
++ H N W +A+ +G T SIRA L VL +KSILDAPCGD WM +P ++ + YTGVD+V ++ N++ + G F AD+ + +P + DL+ RD +VHL R R ++ Q SG+++L+ +TY +N A+ S+ ++NL LPP+ EPL + +D S A D + LW L
Sbjct: 4 IFTHITQNRLWQSAESCSGRGSELACTASIRATLPNVLKKLEVKSILDAPCGDFNWMRHIP-LDGIDYTGVDVVPEVIEQNQRTY--------------------------------------------GSAAIRFMAADIANDALPTA------DLIICRDCLVHLSLRTGYRALQQFQRSGSKYLLVTTYPRTTKNRDVATGSW-----RSLNLLLPPFNFGEPLMILSDPSDDTGAHPDKALALWRL 197
BLAST of mRNA_P-littoralis_Contig19.179.1 vs. uniprot
Match: A0A7S4A599_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A599_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 2.260e-17 Identity = 97/363 (26.72%), Postives = 145/363 (39.94%), Query Frame = 1
Query: 409 AETSKVCFKLHGFNDPPEICAPLRV---SPLTIRDALPAKWHTVTGLIKD------AKTGQSLGVSDGGVSVFNNLNGYGVLDMCGESACLDSSDLRAAYFDYVYRHPNWNANWNAKVKTGTQPMTPSTLSIRA--ALAGVLSAFNIKSILDAPCGDLTWMPLVPGINNVRYTGVDIVDLAVKNNRKQFQLEGRADLAENAVAAAAAAGDAGGEDVEGVLAEQQIAEVGERGRGLKDPVFYTADLVEGVPASRDGKPFDLVFVRDLMVHLPARHNLRVIKNIQASGARFLMASTYVHADENSASESFVPPVGHNINLSLPPYCLPEPLAVFADESTARRDLRMGLWDLHQDSPLALSGSCSPM 1464
AE +VC L G P C L V L + LP K V + D A T S+GV G V + ++ G + D R++YF VY W A + P + + A + ++ F+I+ ++DAPCGD+TWM V + V Y G+D+V + +N +E L A+ V E + ++ RG + L+ R L+ HLP V++++ SGA +L+ STYV AD+ S +V GH NL PYC +P ++ D A D +GLWDL + L G C +
Sbjct: 49 AEAYRVCVALDGE---PMTCNQLDVMAREQLVLTSLLPGKRSLVLTMFSDGTEVASASTQFSVGVGSGNVDIKSHT---------GTTTEWD----RSSYFSTVYELGYWAAQHKMPGVPASGPGSTLDAAKNAITTIEQLIREFDIELLIDAPCGDMTWMASVD-LRGVEYVGIDVVQSVIASN-----IEKHPSLTFMAL---------------DVADESSVDQLRSLVRGRRT----------------------LILCRHLLFHLPVGDGRAVLRHLHGSGASYLLTSTYVKADDFDTS--YVLANGHRTNLLKRPYCARDPSRLYLD---AHADQYLGLWDLAEGEVL---GDCEDL 344
BLAST of mRNA_P-littoralis_Contig19.179.1 vs. uniprot
Match: UPI001CD8EB6D (class I SAM-dependent methyltransferase n=1 Tax=Komarekiella sp. 'clone 1' TaxID=2593771 RepID=UPI001CD8EB6D) HSP 1 Score: 88.6 bits (218), Expect = 2.480e-16 Identity = 69/253 (27.27%), Postives = 106/253 (41.90%), Query Frame = 1
Query: 670 RAAYFDYVYRHPNWNANWNAKVKTGTQPMTPSTLSIRAALAGVLSAFNIKSILDAPCGDLTWMPLVPGINNVRYTGVDIVDLAVKNNRKQFQLEGRADLAENAVAAAAAAGDAGGEDVEGVLAEQQIAEVGERGRGLKDPVFYTADLVEGVPASRDGKPFDLVFVRDLMVHLPARHNLRVIKNIQASGARFLMASTYVHADENSASESFVPPVGHNINLSLPPYCLPEPLAVFADESTARRDL---RMGLWDL 1419
R F+ +Y W + + +G TL I + +L FN+K++LDAPCGD W+ +N RY G DIV + NN++++ E R F DLV G + DL+F RD +VHL + + VIKN + S +R+L+ +TY EN + + I+L L PY P+ + + +E+T R+D +GLW L
Sbjct: 29 RKEVFNDIYYRNRWG---DRESVSGRGSNLRQTLVIIKKIPALLEKFNVKTMLDAPCGDFYWLKEAE-LNLDRYIGCDIVAELITNNQRRYSNESRE--------------------------------------------FINLDLVTG-----ELPQVDLIFCRDCLVHLSFKDTIAVIKNFKKSNSRYLLTTTYPGILEN---KDIITGDWRAIDLQLSPYKFPDMIEIIDEETTERKDYPQKSLGLWKL 225 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig19.179.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig19.179.1 >prot_P-littoralis_Contig19.179.1 ID=prot_P-littoralis_Contig19.179.1|Name=mRNA_P-littoralis_Contig19.179.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=457bp MAVGIRSWTTMLGVWATAAVSRSAPSEQAAPFGLRQQEQQHQHRRQQTKPback to top mRNA from alignment at P-littoralis_Contig19:789413..800387- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig19.179.1 ID=mRNA_P-littoralis_Contig19.179.1|Name=mRNA_P-littoralis_Contig19.179.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=10975bp|location=Sequence derived from alignment at P-littoralis_Contig19:789413..800387- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig19:789413..800387- >mRNA_P-littoralis_Contig19.179.1 ID=mRNA_P-littoralis_Contig19.179.1|Name=mRNA_P-littoralis_Contig19.179.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1371bp|location=Sequence derived from alignment at P-littoralis_Contig19:789413..800387- (Pylaiella littoralis U1_48)back to top |