prot_P-littoralis_Contig19.138.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig19.138.1
Unique Nameprot_P-littoralis_Contig19.138.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length94
Homology
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BLAST of mRNA_P-littoralis_Contig19.138.1 vs. uniprot
Match: D8LS20_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS20_ECTSI)

HSP 1 Score: 60.1 bits (144), Expect = 1.680e-8
Identity = 36/64 (56.25%), Postives = 42/64 (65.62%), Query Frame = 0 
Query:   25 MAPITASIAPLAALFMGSTTTAFVAPTGRGVSWSLAGPQEPSGRPLPPSPGATTSLVAGRQHER 88
            MAPITA+I PL  LF+GSTT AFV PTGRG SWSLA PQ         +  ++TS VA R + R
Sbjct:    1 MAPITATIVPLVTLFVGSTT-AFVTPTGRGASWSLANPQH--------AVRSSTSAVATRHNAR 55
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BLAST of mRNA_P-littoralis_Contig19.138.1 vs. uniprot
Match: D8LS19_ECTSI (EF-hand domain-containing protein n=7 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS19_ECTSI)

HSP 1 Score: 60.1 bits (144), Expect = 1.690e-8
Identity = 36/64 (56.25%), Postives = 42/64 (65.62%), Query Frame = 0 
Query:   25 MAPITASIAPLAALFMGSTTTAFVAPTGRGVSWSLAGPQEPSGRPLPPSPGATTSLVAGRQHER 88
            MAPITA+I PL  LF+GSTT AFV PTGRG SWSLA PQ         +  ++TS VA R + R
Sbjct:    1 MAPITATIVPLVTLFVGSTT-AFVTPTGRGASWSLANPQH--------AVRSSTSAVATRHNAR 55
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BLAST of mRNA_P-littoralis_Contig19.138.1 vs. uniprot
Match: A0A6H5L2G5_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2G5_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 7.250e-8
Identity = 29/39 (74.36%), Postives = 32/39 (82.05%), Query Frame = 0 
Query:   25 MAPITASIAPLAALFMGSTTTAFVAPTGRGVSWSLAGPQ 63
            MAPI+A+I PL  LF+GSTT AFV PTGRG SWSLA PQ
Sbjct:    1 MAPISATIVPLVTLFVGSTT-AFVTPTGRGASWSLANPQ 38
[Close]
BLAST of mRNA_P-littoralis_Contig19.138.1 vs. uniprot
Match: D7FRG5_ECTSI (EF-hand domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRG5_ECTSI)

HSP 1 Score: 50.8 bits (120), Expect = 3.030e-5
Identity = 27/39 (69.23%), Postives = 31/39 (79.49%), Query Frame = 0 
Query:   25 MAPITASIAPLAALFMGSTTTAFVAPTGRGVSWSLAGPQ 63
            MAP++A+  PL AL +GSTT AFVAP GRG SWSLA PQ
Sbjct:    1 MAPLSATTIPLLALSLGSTT-AFVAPIGRGASWSLANPQ 38
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig19.138.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LS20_ECTSI1.680e-856.25EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
D8LS19_ECTSI1.690e-856.25EF-hand domain-containing protein n=7 Tax=Ectocarp... [more]
A0A6H5L2G5_9PHAE7.250e-874.36EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
D7FRG5_ECTSI3.030e-569.23EF-hand domain-containing protein n=2 Tax=Ectocarp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig19contigP-littoralis_Contig19:647126..647407 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig19.138.1mRNA_P-littoralis_Contig19.138.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig19 647126..647407 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig19.138.1 ID=prot_P-littoralis_Contig19.138.1|Name=mRNA_P-littoralis_Contig19.138.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=94bp
QHHNTEQHTFLPHFLPQHHTTTYNMAPITASIAPLAALFMGSTTTAFVAP
TGRGVSWSLAGPQEPSGRPLPPSPGATTSLVAGRQHERLLCEW*
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