prot_P-littoralis_Contig19.123.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig19.123.1
Unique Nameprot_P-littoralis_Contig19.123.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length366
Homology
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BLAST of mRNA_P-littoralis_Contig19.123.1 vs. uniprot
Match: A0A6H5JI08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI08_9PHAE)

HSP 1 Score: 264 bits (675), Expect = 2.890e-82
Identity = 178/325 (54.77%), Postives = 222/325 (68.31%), Query Frame = 0 
Query:    5 AGFVHLDSLVDDIKKKEGDRVKLESQLRQQRLRAESEAADACQVKIELEAASSEMMSLQKQIGLLSRKNEDLAGENAKLMEEKCDFQRSMTNNEAKLRENEQDLKAAQQGFVEDLEKINISYSRNRAEMNTLLGRKGAGCAEIPSPEELDALKAAAAGAAEAKLRAAEVEAXXXXXXXESQALKREVAESVQRQQSLRLEVVSLKEKLKSTVGGKSNGDQVNRHPRGAETANEDKQQSKRQQEMHE-------HISKLEHEVARLDDTCNRQQMYIDQLEEYANGVEDINAELNRQLAQGGDRAG---------GSGGQGGHEHD 313
            AGF HL SLVDDI KK+G+R+KLESQLRQQR+RA++E A A Q+K ELE AS++ +SLQ++IGLLSR+NEDL  E AKL E+  DFQRSM NNEAKL+ENE+DLK AQ+GFVE LEK N SYSR+RA MNTL+GR G GCAEIPSPEEL+A +  AA AAE + R   VEA       ESQALK+E A S ++QQ LR E+ S K   ++  GGKS+       PR  + + ++KQQ+               HI+ LE+E+ARL+DTCNRQ  Y+ QLEEYAN VE IN +L ++   G +  G         G GG+GG E D
Sbjct:    2 AGFGHLGSLVDDINKKDGERLKLESQLRQQRMRADAEEAKASQLKGELEVASADRVSLQQEIGLLSRRNEDLIAEKAKLSEQSSDFQRSMFNNEAKLKENERDLKKAQRGFVESLEKSNASYSRHRAVMNTLVGRNGMGCAEIPSPEELEAFRGLAARAAELQARLHAVEA-------ESQALKQEAATSSRKQQVLRREIDSFK---RNGAGGKSSAGS----PRVDKGSGKNKQQTXXXXXXXXXXXXXXXHITALENEIARLNDTCNRQMEYMSQLEEYANSVEAINEDLRKEQEAGPENGGRGVEGEEREGGGGRGGKEAD 312
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BLAST of mRNA_P-littoralis_Contig19.123.1 vs. uniprot
Match: D8LN29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN29_ECTSI)

HSP 1 Score: 233 bits (593), Expect = 9.830e-72
Identity = 150/290 (51.72%), Postives = 186/290 (64.14%), Query Frame = 0 
Query:    5 AGFVHLDSLVDDIKKKEGDRVKLESQLRQQRLRAESEAADACQVKIELEAASSEMMSLQKQIGLLSRKNEDLAGENAKLMEEKCDFQRSMTNNEAKLRENEQDLKAAQQGFVEDLEKINISYSRNRAEMNTLLGRKGAGCAEIPSPEELDALKAAAAGAAEAKLRAAEVEAXXXXXXXESQALKREVAESVQRQQSLRLEVVSLKEKLKSTVGGKSNGDQVNRHPRGAETANEDKQQSKRQQEMHEHISKLEHEVARLDDTCNRQQMYIDQLEEYANGVEDINAELNRQL 294
            AGF HL SLVDDI K++G+R+KLESQLRQQR+RA++E A   Q+K ELE AS++ +SLQ++IGLLSR+NEDL  E AKL E+  DFQRSM NNEAKL+ENE+DLK AQ+GFV+ LEK N SYSR+RA MN L+GR G GCAEIPSPEEL+A +  AA AAE + R   VEA       ESQALK+E A S ++Q+ L+ E+ S K                                                 +ARLDDTCNRQ  Y+ QLEEYAN VE IN +L +++
Sbjct:    2 AGFGHLGSLVDDINKRDGERLKLESQLRQQRMRADAEEAKVSQLKGELEVASADRVSLQQEIGLLSRRNEDLIAEKAKLSEQSSDFQRSMFNNEAKLKENERDLKEAQRGFVDSLEKSNASYSRHRAVMNNLVGRNGVGCAEIPSPEELEAFRGLAARAAELQARLHAVEA-------ESQALKQEAAASSRKQKVLQREIDSFK-------------------------------------------------IARLDDTCNRQMEYMSQLEEYANSVEAINEDLRKEV 235
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig19.123.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JI08_9PHAE2.890e-8254.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LN29_ECTSI9.830e-7251.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 52..86
NoneNo IPR availableCOILSCoilCoilcoord: 10..37
NoneNo IPR availableCOILSCoilCoilcoord: 273..296
NoneNo IPR availableCOILSCoilCoilcoord: 163..197
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 280..365
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 214..256
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 230..256

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig19contigP-littoralis_Contig19:540802..545687 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig19.123.1mRNA_P-littoralis_Contig19.123.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig19 539769..546955 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig19.123.1 ID=prot_P-littoralis_Contig19.123.1|Name=mRNA_P-littoralis_Contig19.123.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=366bp
MQPTAGFVHLDSLVDDIKKKEGDRVKLESQLRQQRLRAESEAADACQVKI
ELEAASSEMMSLQKQIGLLSRKNEDLAGENAKLMEEKCDFQRSMTNNEAK
LRENEQDLKAAQQGFVEDLEKINISYSRNRAEMNTLLGRKGAGCAEIPSP
EELDALKAAAAGAAEAKLRAAEVEARMHAVEAESQALKREVAESVQRQQS
LRLEVVSLKEKLKSTVGGKSNGDQVNRHPRGAETANEDKQQSKRQQEMHE
HISKLEHEVARLDDTCNRQQMYIDQLEEYANGVEDINAELNRQLAQGGDR
AGGSGGQGGHEHDGAVDSAAPASDLPGAGAEGSQDQDHRKGLTQNVEHGN
AQALPGASRGEQGRE*
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