mRNA_P-littoralis_Contig19.112.4 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig19.112.4
Unique NamemRNA_P-littoralis_Contig19.112.4
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig19.112.4 vs. uniprot
Match: D7FLU2_ECTSI (OTU domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLU2_ECTSI)

HSP 1 Score: 291 bits (745), Expect = 1.620e-90
Identity = 236/321 (73.52%), Postives = 256/321 (79.75%), Query Frame = 1 
Query:    1 QSVDEVMTRHKRELKALDGTRRKLIKQANKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTAGXXXXXXXXXXXXXXXXXXXXXXVSGGGDQAVDKVAEGVGGMSVEDREKEKRDXXXXXXXXXXXXXXXXXXXXX----QRIAKEKAEGGPNPRDVEMEALKTQVAPRGFRVREIKADGHCLYRAVAEQLGITGRKAGSTQEAYAEMRREAARELRSCPDEYLPFLDGLGEGEEFQQYCGKVEGSAEWGGQVELQALCSALEVPIEVFSAMSPPLLLGEGHGGAPLMLTYHEHYYALGAHYNSVVPA 951
            +SVDEV  RHK+E+KALDGT RKLIKQANK XXXXXXXXXXXXXXXXXXXXXXXXXX              + +      XXXXXXXXXXXXXXXXXX        VD VA+GVG MSV         XXXXXXXXXXXXXXXXXXXXX    QRIAKEK EGGP+PR VEM+ LKTQVAPRGFRV EIKADGHCLYRAVA+QL +TGR+ G T+E+Y  MR+EAARELRS P EYLPFLDGL EGEEF +YC KVEGSAEWGGQVELQALCSAL VP+EVFSAMSPPLLLG+G+ G PL+LTYHEHYYALG+HYNSVVPA
Sbjct:    5 ESVDEVKARHKKEIKALDGTGRKLIKQANKNXXXXXXXXXXXXXXXXXXXXXXXXXXEEATEAAAGDGDVDDASESAAKSXXXXXXXXXXXXXXXXXXXXX---SEVDGVADGVGAMSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRIAKEKEEGGPDPRIVEMDVLKTQVAPRGFRVSEIKADGHCLYRAVADQLSLTGRRPGLTEESYPLMRQEAARELRSSPSEYLPFLDGLEEGEEFDKYCVKVEGSAEWGGQVELQALCSALRVPMEVFSAMSPPLLLGQGYDGPPLLLTYHEHYYALGSHYNSVVPA 322
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BLAST of mRNA_P-littoralis_Contig19.112.4 vs. uniprot
Match: A0A835Z5X2_9STRA (OTU domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5X2_9STRA)

HSP 1 Score: 162 bits (411), Expect = 1.200e-41
Identity = 86/171 (50.29%), Postives = 115/171 (67.25%), Query Frame = 1 
Query:  466 KAEGGPNPRDVEMEALKTQVAPRGFRVREIKADGHCLYRAVAEQLGITGR------KAGSTQEAYAEMRREAARELRSCPDEYLPFLDGLGEGEEFQQYCGKVEGSAEWGGQVELQALCSALEVPIEVFSAMSP-PLLLGEGHGG---APLMLTYHEHYYALGAHYNSVVP 948
            +A  GP+ R VE+EAL   + PRG  V  I++DG+CLYRAVA QL +          A + ++ +A +RR AA  LR    E++PF++   EG  ++ YC  VEGSAEWGG+VEL+AL  AL VPIEV+SA +  P+++GEG  G   APL ++YH+HYYALG HYNSVVP
Sbjct:  150 RAAAGPDARTVELEALSANLLPRGLAVAPIRSDGNCLYRAVAHQLAVAAHGGDGAAAAAAAEDGHAGLRRVAAAHLREHAAEFMPFVEACDEGA-YEAYCALVEGSAEWGGEVELRALSRALRVPIEVWSAAAAQPMVVGEGEEGGAAAPLRVSYHQHYYALGEHYNSVVP 319
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BLAST of mRNA_P-littoralis_Contig19.112.4 vs. uniprot
Match: A0A7S4B021_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B021_CHRCT)

HSP 1 Score: 158 bits (400), Expect = 1.270e-39
Identity = 80/166 (48.19%), Postives = 107/166 (64.46%), Query Frame = 1 
Query:  448 QRIAKEKAEGGPNPRDVEMEALKTQVAPRGFRVREIKADGHCLYRAVAEQLGITGRKAGSTQEAYAEMRREAARELRSCPDEYLPFLDGLGEGEEFQQYCGKVEGSAEWGGQVELQALCSALEVPIEVFSAMSPPLLLGEGHGGAPLMLTYHEHYYALGAHYNSVV 945
            +RIA+EKA  GP+ R VE E L  ++ P G  V+E+ ADGHCLYR+VA+QL  +G  A      + + RR AA  +R+ PD+++P+L G         YC +VE S+EWGGQ+E+ AL  A    + V+SA  PPLL GE + GAPL L YH HY+ LG HYNS+V
Sbjct:  205 KRIAEEKAASGPSARAVETERLMAKLEPLGLAVQEVPADGHCLYRSVADQLQRSGDAAD-----FQQCRRLAAEYIRTHPDDFMPYLPGEAGATTIDAYCAQVESSSEWGGQLEITALSHACRRCVAVYSADGPPLLTGEQYAGAPLTLAYHRHYFGLGEHYNSLV 365
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BLAST of mRNA_P-littoralis_Contig19.112.4 vs. uniprot
Match: A0A7S0I6F7_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I6F7_9EUKA)

HSP 1 Score: 148 bits (373), Expect = 4.810e-38
Identity = 82/170 (48.24%), Postives = 112/170 (65.88%), Query Frame = 1 
Query:  448 QRIAKEKAEGGPNPRDVEMEALKTQVAPRGFRVREIKADGHCLYRAVAEQLGITGRKAGSTQEAYAEMRREAARELRSCPDEYLPFLDGLGEGEEFQQYCGKVEGSAEWGGQVELQALCSALEVPIEVFSAMSPPLLLGEGHG--GAPLMLTYHEHYYALGAHYNSVVPA 951
            QR+A EKA  GP+ R++EM  L+ Q+ P G ++ EI ADGHCLYRAVA+QL   G +    +E Y+  RR AA  +RS P +++P++    EG +   Y  +VEGS EWGGQ+E+ AL  A +  I VFSA++P L+ GE +   G  L L YH+HYY LG HYN+VVP+
Sbjct:   11 QRMADEKAGAGPSQRELEMAQLEQQLQPLGRQIAEIAADGHCLYRAVAQQLMQHGSE--GVEEDYSGCRRLAAAYMRSHPGDFMPYV--AAEGMDMGTYTQQVEGSNEWGGQLEITALAHARKRTIAVFSAVAPLLVTGEEYADNGPRLELCYHKHYYGLGEHYNAVVPS 176
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BLAST of mRNA_P-littoralis_Contig19.112.4 vs. uniprot
Match: A0A7S1W3G8_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1W3G8_ALECA)

HSP 1 Score: 145 bits (365), Expect = 1.040e-36
Identity = 85/172 (49.42%), Postives = 108/172 (62.79%), Query Frame = 1 
Query:  454 IAKEKAEGGPNPRDVEMEALKTQVA--PRGFRVREIKADGHCLYRAVAEQLGITGRKAGS----TQEAYAEMRREAARELRSCPDEYLPFLDGLGEGEEFQQYCGKVEGSAEWGGQVELQALCSALEVPIEVFSAMSP-PLLLGEGHGGAPLMLTYHEHYYALGAHYNSVVP 948
            I +EK E GP+ R +E+ AL  Q+A      RV E+ ADGHCLYRAV +QL     +A       ++ + E+R   A+ L   PD Y PF + L +GE+F+ YCG+VE S +WGG++EL+AL   L V I V  A  P PL LGEG G APL +TYH HYYALG HYNS VP
Sbjct:   20 IEREKREAGPSARALELAALGQQLACCKPPLRVNEVAADGHCLYRAVGDQLRRVRPEAHRWMRPPEQVHEEVRSLCAQSLLKRPDAYSPFAE-LKDGEDFRAYCGRVERSGDWGGELELRALADRLGVRILVHRANEPKPLELGEGKG-APLQVTYHRHYYALGEHYNSAVP 189
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BLAST of mRNA_P-littoralis_Contig19.112.4 vs. uniprot
Match: W7U3S7_9STRA (Ovarian tumor, otubain n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3S7_9STRA)

HSP 1 Score: 146 bits (369), Expect = 1.960e-36
Identity = 79/163 (48.47%), Postives = 109/163 (66.87%), Query Frame = 1 
Query:  472 EGGPNPRDVEMEALKTQVAPRGFRVREIKADGHCLYRAVAEQLGITGRKAGSTQEAYAEMRREAARELRSCPDEYLPFLDG--LGEGEEFQQYCGKVEGSAEWGGQVELQALCSALEVPIEVFSAMSPPLLLG-EGHGGA-PLMLTYHEHYYALGAHYNSVVP 948
            EG  + RD+EM  + + ++P G RV+E+ ADGHCLYRAVA QL       G   + Y E+RR AA+ + S P+++LPFL G   GEG   + Y   VE +AEWGG++E++ALC A + PI V++A  P  ++G E +  A PL+L+YH H+YALG HYNSVVP
Sbjct:   95 EGVVSLRDLEMGQILSLLSPLGLRVQEVPADGHCLYRAVAHQL----EHQGIPSQGYPEVRRSAAQYILSHPEDFLPFLAGGEEGEGAGLEAYVHTVEDTAEWGGELEIRALCHAYQTPIRVYAAEQPVYMIGAEDYDQAKPLLLSYHRHFYALGEHYNSVVP 253
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BLAST of mRNA_P-littoralis_Contig19.112.4 vs. uniprot
Match: A0A7S0L9G8_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L9G8_9EUKA)

HSP 1 Score: 147 bits (370), Expect = 4.040e-36
Identity = 79/173 (45.66%), Postives = 110/173 (63.58%), Query Frame = 1 
Query:  448 QRIAKEKAEGGPNPRDVEMEALKTQVAPRGFRVREIKADGHCLYRAVAEQLGITGRKAGSTQEAYAEMRREAARELRSCPDEYLPFLD---GLGEGEEFQQYCGKVEGSAEWGGQVELQALCSALEVPIEVFSAMSPPLLLGEGH--GGAPLMLTYHEHYYALGAHYNSVVPA 951
            +RIA+EKA  GP+ RD+EM+ L  ++ P G +V+EI ADGHCLYR++A Q+ + G+   S Q      RR+A+  +R+ P ++LP+L    G    +   +YCG +E S+EWGGQ+E+ AL    +  I V SA +P LL GE +   G  L L YH HYY LG HYNS+VPA
Sbjct:  127 RRIAEEKAAAGPSARDIEMQKLVVKLMPLGLQVQEIPADGHCLYRSLAHQMQLDGQSGISFQHC----RRDASAYIRANPSDFLPYLAADAGDASEQSLDKYCGTIEASSEWGGQLEITALAHFHKRCIAVHSADAPVLLTGEDYDANGPRLQLAYHRHYYELGEHYNSLVPA 295
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BLAST of mRNA_P-littoralis_Contig19.112.4 vs. uniprot
Match: A0A4D9CYR4_9STRA (OTU domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYR4_9STRA)

HSP 1 Score: 146 bits (369), Expect = 1.190e-35
Identity = 77/157 (49.04%), Postives = 106/157 (67.52%), Query Frame = 1 
Query:  490 RDVEMEALKTQVAPRGFRVREIKADGHCLYRAVAEQLGITGRKAGSTQEAYAEMRREAARELRSCPDEYLPFLDG--LGEGEEFQQYCGKVEGSAEWGGQVELQALCSALEVPIEVFSAMSPPLLLG-EGHGGA-PLMLTYHEHYYALGAHYNSVVP 948
            RD+EM  + + ++P G RV+E+ ADGHCLYRAVA QL       G   + Y E+RR AA+ + S P+++LPFL G   GEG   + Y   VE +AEWGG++E++ALC A + PI V++A  P  ++G E +  A PL+L+YH H+YALG HYNSVVP
Sbjct:  174 RDLEMGQILSLLSPLGLRVQEVPADGHCLYRAVAHQL----EHQGIPSQGYPEVRRSAAQHILSHPEDFLPFLAGGEEGEGAGLEAYVHAVEDTAEWGGELEIRALCHAYQTPIRVYAAEQPIYMIGAEDYDQAKPLLLSYHRHFYALGEHYNSVVP 326
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BLAST of mRNA_P-littoralis_Contig19.112.4 vs. uniprot
Match: W4FCW5_9STRA (OTU domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FCW5_9STRA)

HSP 1 Score: 143 bits (361), Expect = 6.270e-35
Identity = 73/166 (43.98%), Postives = 108/166 (65.06%), Query Frame = 1 
Query:  490 RDVEMEALKTQVAPRGFRVREIKADGHCLYRAVAEQLGITGRKAGSTQEAYAEMRREAARELRSCPDEYLPFLD-----GLGEGEEFQQYCGKVEGSAEWGGQVELQALCSALEVPIEVFSAMSPPLLLGEGH---GGAPLMLTYHEHYYALGAHYNSVVPA*RDG 963
            R +E +A+  Q+   G  V+EI +DGHC+Y AVA+QL +T R    + +AY  +R++ A  LRS  D+++PF++      +   ++F+ YC +VE +A+WGGQVEL+AL  AL VPIEV+SA S  L++G+ +      PL L+YH HYY LG H+NS+V A   G
Sbjct:  125 RQIESDAIAAQLTSLGLIVKEIPSDGHCMYHAVADQLKLTRRLPFPSSDAYIPLRQKTAAYLRSHADDFVPFVELDYASDIAIQDQFESYCARVEATADWGGQVELRALAQALAVPIEVYSASSSVLVMGDEYHREDQPPLRLSYHLHYYTLGEHFNSIVYASSGG 290
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BLAST of mRNA_P-littoralis_Contig19.112.4 vs. uniprot
Match: A0A2R5H1E0_9STRA (OTU domain-containing protein 6B n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5H1E0_9STRA)

HSP 1 Score: 144 bits (363), Expect = 6.880e-35
Identity = 74/174 (42.53%), Postives = 115/174 (66.09%), Query Frame = 1 
Query:  448 QRIAKEKAEGGPNPRDVEMEALKTQVAPRGFRVREIKADGHCLYRAVAEQLGITGRKA-GSTQEAYAEMRREAARELRSCPDEYLPFLDGLGEGEE-----FQQYCGKVEGSAEWGGQVELQALCSALEVPIEVFSAMSPPLLLGEGHGGAPLMLTYHEHYYALGAHYNSVVPA 951
            +R A+ KA+ GP+ RD EME +  ++  +GF ++E++ADGHCLYRAVA+QL    + + G ++E +  +R   A+ +R+    + PF+    EG E     F++Y   V+ SAEWGGQ+EL+AL  AL+ PIEV++A  P +++GE   G PL +++H+H+  LG HYNSV P+
Sbjct:  145 ERFAERKAQAGPSRRDREMETISAKLLGKGFALKEVEADGHCLYRAVADQLIQKKQTSVGESKEPHKLLRTMCAQYMRTHRPLFEPFIALDDEGGEQGAHSFEEYLDTVQNSAEWGGQLELRALAGALQTPIEVYAADGPMVIMGEDFTGEPLRVSFHQHFLTLGEHYNSVQPS 318
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig19.112.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLU2_ECTSI1.620e-9073.52OTU domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835Z5X2_9STRA1.200e-4150.29OTU domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S4B021_CHRCT1.270e-3948.19Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S0I6F7_9EUKA4.810e-3848.24Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A7S1W3G8_ALECA1.040e-3649.42Hypothetical protein n=1 Tax=Alexandrium catenella... [more]
W7U3S7_9STRA1.960e-3648.47Ovarian tumor, otubain n=1 Tax=Nannochloropsis gad... [more]
A0A7S0L9G8_9EUKA4.040e-3645.66Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A4D9CYR4_9STRA1.190e-3549.04OTU domain-containing protein n=1 Tax=Nannochlorop... [more]
W4FCW5_9STRA6.270e-3543.98OTU domain-containing protein n=2 Tax=Aphanomyces ... [more]
A0A2R5H1E0_9STRA6.880e-3542.53OTU domain-containing protein 6B n=1 Tax=Hondaea f... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig19contigP-littoralis_Contig19:483856..490043 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FLU2
Preferred nameOTUD6B
PFAMsOTU
Model size1779
Max annot lvl2759|Eukaryota
KEGG koko:K14015,ko:K18342
KEGG Pathwayko04141,map04141
KEGG ModuleM00400,M00403
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004843,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006417,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0008283,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0010498,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0016043,GO:0016579,GO:0016787,GO:0017148,GO:0019222,GO:0019538,GO:0019783,GO:0019941,GO:0022607,GO:0030163,GO:0030433,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032268,GO:0032269,GO:0032270,GO:0033554,GO:0034248,GO:0034249,GO:0034250,GO:0034622,GO:0034976,GO:0035523,GO:0035871,GO:0036211,GO:0036459,GO:0036503,GO:0042221,GO:0043161,GO:0043170,GO:0043248,GO:0043412,GO:0043632,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0045727,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051247,GO:0051248,GO:0051603,GO:0051716,GO:0060255,GO:0065003,GO:0065007,GO:0070011,GO:0070646,GO:0070647,GO:0071704,GO:0071840,GO:0080090,GO:0101005,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1990167,GO:1990168,GO:2000112,GO:2000113
Exons6
Evalue2.92e-92
EggNOG OGsCOG5539@1|root,KOG2606@2759|Eukaryota
Ec32 ortholog descriptionOvarian tumour, otubain
Ec32 orthologEc-26_001250.1
EC3.4.19.12
Descriptionubiquitinyl hydrolase activity
Cds size936
COG categoryO
BRITEko00000,ko00001,ko00002,ko01000,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig19.112.4prot_P-littoralis_Contig19.112.4Pylaiella littoralis U1_48polypeptideP-littoralis_Contig19 484681..490025 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789910.6808093-UTR-P-littoralis_Contig19:483855..4846801680789910.6808093-UTR-P-littoralis_Contig19:483855..484680Pylaiella littoralis U1_48UTRP-littoralis_Contig19 483856..484680 -
1680789910.7780163-UTR-P-littoralis_Contig19:490025..4900431680789910.7780163-UTR-P-littoralis_Contig19:490025..490043Pylaiella littoralis U1_48UTRP-littoralis_Contig19 490026..490043 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789910.7076142-CDS-P-littoralis_Contig19:484680..4848391680789910.7076142-CDS-P-littoralis_Contig19:484680..484839Pylaiella littoralis U1_48CDSP-littoralis_Contig19 484681..484839 -
1680789910.719416-CDS-P-littoralis_Contig19:485634..4857611680789910.719416-CDS-P-littoralis_Contig19:485634..485761Pylaiella littoralis U1_48CDSP-littoralis_Contig19 485635..485761 -
1680789910.7315743-CDS-P-littoralis_Contig19:486791..4869241680789910.7315743-CDS-P-littoralis_Contig19:486791..486924Pylaiella littoralis U1_48CDSP-littoralis_Contig19 486792..486924 -
1680789910.7476223-CDS-P-littoralis_Contig19:487806..4879091680789910.7476223-CDS-P-littoralis_Contig19:487806..487909Pylaiella littoralis U1_48CDSP-littoralis_Contig19 487807..487909 -
1680789910.7570095-CDS-P-littoralis_Contig19:488653..4889531680789910.7570095-CDS-P-littoralis_Contig19:488653..488953Pylaiella littoralis U1_48CDSP-littoralis_Contig19 488654..488953 -
1680789910.7690067-CDS-P-littoralis_Contig19:489911..4900251680789910.7690067-CDS-P-littoralis_Contig19:489911..490025Pylaiella littoralis U1_48CDSP-littoralis_Contig19 489912..490025 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig19.112.4

>prot_P-littoralis_Contig19.112.4 ID=prot_P-littoralis_Contig19.112.4|Name=mRNA_P-littoralis_Contig19.112.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=312bp
MTRHKRELKALDGTRRKLIKQANKNKNKVAEAEAKIAEMDLETKDRHRRE
LEAAAATGTATSSASEPTAGGEEEKGAAAAAAASESEFAAASVSGGGDQA
VDKVAEGVGGMSVEDREKEKRDQKRAKAQRKREKQREKEAEREQRIAKEK
AEGGPNPRDVEMEALKTQVAPRGFRVREIKADGHCLYRAVAEQLGITGRK
AGSTQEAYAEMRREAARELRSCPDEYLPFLDGLGEGEEFQQYCGKVEGSA
EWGGQVELQALCSALEVPIEVFSAMSPPLLLGEGHGGAPLMLTYHEHYYA
LGAHYNSVVPA*
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mRNA from alignment at P-littoralis_Contig19:483856..490043-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig19.112.4 ID=mRNA_P-littoralis_Contig19.112.4|Name=mRNA_P-littoralis_Contig19.112.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=6188bp|location=Sequence derived from alignment at P-littoralis_Contig19:483856..490043- (Pylaiella littoralis U1_48)
CAGAGCGTCGACGAGGTCATGACCAGGCACAAGAGAGAGCTGAAAGCGCT
CGATGGCACCAGGAGGAAGCTCATCAAGCAGGCCAACAAGAACAAGAACA
AGGTGGCGGAAGCGGAGGCGAAGATCGCCGAGGTAGGGTACCGATTCAAG
GATGGTTGTGGTTTTGTCATCTCTTTTGTCTCTTGTATTTCGCGCGCGTG
TGTGTGTGTGTGTGCGTCTGTGTGTGTGTTTTTTGCTGGAGTTGATTTTG
AAGCACCGCTGCAGAAAAGAGACAGAGGTGTCTCTCCTGGCGGAGGATGC
AGCCATGCGCTCCTCGTTTTTGGCGCAAAGCTTGTGCCATGTATTTTGTG
CGTCCGCGGTTCTGTTGGCAGGCTTTCGACGACCCCCATCTACAGTTAGT
GCGGCAGAGGTAAGCATTTACTGTGCCCACGACCCCCGACGCAGGCTTTC
GCCATCGCGTTGTTTCGTATACTTTCGCGATGACGTAGGGCTGTGCCTCA
AGAACGGCAGCCTCGAAGCGCGAGGTTTTGTTTTGTTGATTTTTTGGGGA
AAACGGGGTCACGGGCGCCCAGCCCAACCCACGACAGCCTCAGCAGCATA
CTGCGAAGCAAGTAGATTTTTGTGTTTATGTTGCTCTGGCAAAAAAGTCG
ACAACGTGTTGGTCCCTGTTTTCCACAAGCACAGCAGCAGCCCCACCTCT
GTTTGATAACGTACAAGCTTGTGAGTAGCCCCCCCAAAAAATAATGTTCA
CAAGACACAAATCGACAACTCTGGGAGACAGCCTGGCTGACCTTGCACGA
TGAAGTTGTCGCTCAAGCACACTTGCACAGGCACGTGACACAAACACAAC
ATGCACGCGAACACGCATACTTTTCGGAGTATATCTGTAGGAGTGGAGCC
GTGCCCACCTTCTTCGGCGTTTGCGTATCCTTCCTTCTACTTTTGTGTTT
TTTTTCGGATCTTCCTAGACGGGCTCGGCACTTTTGTGACCACGGGCTAG
ATTTTTAGCGATGAGCTTATGCGAGAATCAACAACAACAACAACAACAAC
AACAACAACAACAACAACAACAACAAACAACCGTAAACAGATGGACCTCG
AGACGAAAGACCGGCATCGGCGAGAGCTAGAAGCGGCCGCCGCTACCGGT
ACCGCTACCTCCTCCGCCTCAGAACCGACAGCCGGCGGAGAAGAGGAGAA
AGGCGCCGCTGCCGCTGCCGCTGCATCCGAATCCGAATTCGCTGCGGCTA
GCGTCAGTGGGGGAGGGGACCAGGCCGTAGATAAGGTGGCCGAGGGAGTC
GGAGGTATGTCCGTGGAGGACAGGGAGAAGGAGAAGCGAGATCAGAAGAG
GGCCAAGGCCCAGCGAAAGCGAGAAAAACAGCGCGAAAAGGTGCGTGTAT
TGATACATATTAGTTCATATCGTATCATAAGAGTGCGAATGCATGAAAGC
ATGCGCAAATGGGTGTTGCTCTTGTGTGTGTGTGTGTGTGTGTTCGTCTC
TGTGTGTTGCGTGCGTGTGTGTGTGTGCATGTATGTTTTATCTGCGTGTA
TGTGTGTGCCTGTGTCTTGTCTGGCAGTGTCTGCGTGTTTACGCACCTCT
GCCGAAACCTTTGAACAGACGAGAGTCGGACGGAAACGCTCGTGTACGTG
GAGTGCGTTGGCTCTGTCGGCTAAAACGGCGAAAGGATCAATAACGCTGC
TGTGCAAACCTGCAAAAATATACGCCCCAAGAGGGTCCCGTGCGGCGTCG
TCCTTTGGAATATTCAGCAGCAACGGCCCCGTAAGAACTGGCCATAAAAA
CGGCTACTGCTGTAGGTATGTACAAGACGTGGCCGCTCCTGTGCTACACA
TTATTTGCTGGGCATACGTTCCCTGTTCGATGGTCGGCCTGAAATGACTG
AACAACGGAGTAGCGTACCAGCCTTTCGCCACGTCGCATTTACAAAAGGA
TACTTTTTTTATGCTGATTTTTGTTTTTGTTGGGCCTGGTTTGTTGTGAC
CACAGCTAGACTTTGACGGCGAGCTATTGTAACAATGAACAACAAAAGCA
ACAACATCAACGACAACGACAACGACGACAACAACAACAACAACAACAAC
AACAACAACGCATCAAAATATCACCATCTGGCAGGAGGCCGAGAGAGAGC
AGCGCATCGCGAAGGAGAAGGCGGAGGGAGGGCCCAACCCTAGAGATGTG
GAGATGGAAGCCCTCAAGACACAGGTTGCTCCGCGAGGTACGTTGGACAC
TCTCTTCGCAAGAAACGCTTGTTTGGTCGAAACTGGCTGATTGCGTTTCT
CAACTTCGAAAGTGTGTCTCGTTCACTACAGTCATTCCAGCACCAGCCAG
AACCTTCTGGGAATTTCCCTGCGAATAAACGAGCTATTCTCTGTTTGCCA
GAGTTTGTTGTTTTGGCCACAGCTGGCTCGTTACATTTGTTAGCCTCGAT
AGTGTGTCTCATACGCGTACATTAGTGCGTCTATATAACCATGCCCTATT
TTTTTGGGCATTTTCCTGAGAAAACCGAGCCTTGCTCTGCCAGAATTTTT
CGTCATGGCCGAAACTGGCTGGTTGCATTGGTTAGCTTCGAGAGTGTGTC
TCGCACACTAGACGTAGAACAGTTTTGCCAGAATATTCCTAGTATTTCCT
GAAGAAACCGAGCCTCCCTCCGTTTGCCAAAGCTTCTTGTCTAGGCCGAA
ACTGGCTGGTTGCATTTGCCAACTTCGAAAGTGTGTCTCGCACGCAAACA
GTAGTTCAACGATGCCATAAATCTCTGGGTATTTTCCATAGAAACCGAGC
CTTCCTCCGTTTGCCAGAATTTCTCGCTTTGGCCGAAACTGGCTGGTTGC
GTTTGCGAATTTTCAAAAGTGCGTCTACACTTTTTTCTATTTTCCTTACT
GTATTGCCGTGCCAGAATTTTCTAGGTGTTTTCCTGACATCCTGAGAAAC
CGATCTCGTTCCCGTATTCCTCATTTACCCTATGATGCCAGAATTTTCCG
GGCATTTTCCTGACTGACACCCTGAGAAACCGATCCCGTCTGCGATATTC
TCATTGACATCTATCGTACGTAATATATTTATGCTTTGCTGTCGTTTTGG
TGCCGTGTTTTCTCCGCAGGGTTCCGAGTAAGGGAGATCAAGGCGGATGG
GCACTGCCTTTATCGGGCCGTGGCCGAACAATTGGGCATCACCGGGCGAA
AAGCGGGCTCAACGCAGGAGGCCTACGCGGAGATGAGACGAGAAGCTGCC
AGGCAATACTACCGCTGCTGCTGGTGTGCTTTGCTCTCAACTGATGTGTA
CCTTTGCGCGCGAGTCGAGAGTCAGTCGCGGATCCACCAACACCCCGTCA
ACATGACTGAAGCATTGTTTGACGCAGCCGCGGTTGCGGTTGAAGAGAGG
GATGCGCCACGCCAATAACACACCTCCCTTGGATTCAATTTAACGAGTGG
AATTGCTCTTGAGACGTGTATCGTGAAGCTTGTTCGACCCCTCTCTCTCT
CTTTTTTACGCCGGCCGTTCTCTTGAAACACACTGCATCTCTCTTTTTAG
CAGCGATCATGTGACTCTGGATAAATGTATGTGATACGTACGTACTTACG
TACGTCCTTCCCGCGCAACCAACAAAAAGAACACCATATCTGTCTGTCTA
CAGGCCTGCGACCCTGAGCCGATAAAAATCTTCCCTTGTTCCTTTTCATT
GGTCTCTGCCTGCCGTCCCGCGCAAGAAAACTGCGATCCTGTTCCGATGA
GTACTTTCCCTTCCCCCACGTGAAATAAATGCCGCAGGTGACGCAAGATA
CCACCCCCCCCTGAACCATTTTTTTAGATGTCGATTACTCCGTCACGAAA
GAAATTACTATCTTTTGATAGAACATAATGATACATTTTCGAAGACCTGT
CGTCGACATCTCTTGAACGCCACCATTATCGGCACTGCCAGTCGTCTTGC
TGGGTAGTGGAGTAGGATGGCTTTCAAAACGGATCTAGGGGGATGTGGTT
TGCCGTGTCATCTACGGTACATGGTGCAGTCTGGTTTCGCGTGTGTGAAC
AATCGTCAAAAGCTGCTCTCTCTCTCTTTTGCCAGAAAAGTGCGATCACG
TCAAAAATGTATCGTTGTTGTACGTGGTCTGTCCTTTGCGTGCGTGCGTG
CGTGTGTGTGTGTCAACAGCAGTCATGTACAGAGTACCGCGCTTGCGGCG
GTGGCGTTGCACAAGAGGGGTCTAATCTATCCTCCCCGTGCCCGTTTGAA
CGATTGTCGACGCTGCTCGTTGTGTGTTGCAGAGAGCTGCGATCCTGTCC
AGACGAGTACCTCCCTTTCCTCGACGGGTTGGGGGAGGGAGAGGAGTTCC
AACAGTACTGCGGCAAAGTGGAGGGGAGTGCCGAGTGGGGGGGGCAGGTG
GAGCTTCAGGTGTGCCATTTGGTGTCAGCACACTGCATACCGTGTGGGTG
TCAGCGCTGCGGTACTGCTGTAGCTTTGGTTTTGTGACCGGTGACTATAC
CGTTTGTTGCAGCGTCTACCTGGTGAATTGAATTGTTTCTGAATTTGATG
CTCCTTTAAAAGCTTCTTGGTACCAGGCTCAGACAGCACGTCTTGAATGC
GGCAGCTTTCACGGGAAGCCCGACCGATGTTGACGTAGCCACCATTTCGG
CTTCAAAGCCGCGACCTGCCCAATGATAGACAGTGTGTGCCCTGCGAAGG
TAAACCTCTCCCCACGGAACTCCATCTTGCACCGATTTTCAGAGCTTGGC
TTACTCACCTCCGATAGATACTGGGCGGTGCACTCTCGAACGGCTTTCAT
ATCTCTCATATATGAGGAATTTCCCTGGAAATTTCCAACGCCAGCTTTAA
GTTACCCTTCGGTACCCACCCCCTTTTTTACCCCCGATATGATACACTAC
TGCTGCACCCTTTCCCACTATCACGTGTACGCTCAACTGTTTTTGAACGA
TATGATATGTACAACGCCGTACTGCTAATGTACCCCATTTTTTTCCCTCG
GGTGCGAAAAAAAAAAAAACTCCTGTGTTGACCTTCCTCTTCCTGTCTGT
CGTGACCCCGGTTGATGGGCTCAACTCCTGCCGAAAGGCGTCAACCAGCG
TCTAGAATAGAATAGATGGGAATGCCAACACACACACACTTGTTTCTAAC
GGTACACCTTTCCTGACGACGCCATTTTCTACCGCACCCCGCCTTTTCGT
TCAGGCCTTGTGCAGCGCGCTCGAGGTTCCGATCGAGGTTTTCTCGGCCA
TGTCTCCGCCGCTGCTTCTGGGGGAGGGGCACGGGGGAGCCCCCCTGATG
CTTACGTACCACGAGCACTACTACGCCCTCGGTGCTCACTACAACTCCGT
GGTGCCGGCCTGACGCGACGGTTTTATCCGTACTGCTGTACCGGAATATC
TTTCGGTTTTACTAAGTCCGCCCACTCGGCGGACCGGAGTATTGTTGTTA
CTCTGTCGACTGCCGTGTGCGAGCATCAGGCATGATTGCGACGAGGATGT
TTTTTCGGCAGCAGGGTCTTCTCGCTTGTTTGGTTTTGGGGACTGGCTGA
ACCATCGACCGCCGTCCGAGAGGCCGTAGCTTGTCGTAGCCGCAGACATG
AAAGATGGCTGCACGTACGTCTACGGAATAAATGGGATGTGGGCAGGGCT
GGCTGCGTGGCAAGCACCCAGCATTGGTACTGAAAGCAGGAGAGATGAAT
GCTGCGTCCTCCCTGTATGAATCTTCTGCACGACGTCTCCGGCGGCTGCG
CAGATCCTCGATTCTTTCAAGTTCTGGCTTTGTAGATTCCGCCCCTGCAC
ATTTTCTATACAACTGCAGCACTACTGCTGTAGAGCCCTTAGAGCGGGGA
GGAAAGTATCGCGTTCACTTCAGGAGACAGCTAAATGGCAATTAAATCGT
CGATTCAATCACTGCAGTAGCGTCCTCAGGGCGGGGAGGGAAAAGGGTCC
CGTCAACTTCAGGAGACAGCAGATGGCAATTAAATCGTCGATTCAAAGTC
ATCGACAGCGGCAGCGGTTTGGTTTCCGACAGGCACATAGAACACACACA
ACCACACAACCACAGGTTGATCCCCTCAGAGTTGACCCGCCGCGAAGTCG
ACCCGCTTCGAAGTTGACCCGCCACCCCCCACAAAATTGTACCGGGAAGA
AGGTGCGGCGCGTGTCTTCTGTACGTATGAGCTTCTTG
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Coding sequence (CDS) from alignment at P-littoralis_Contig19:483856..490043-

>mRNA_P-littoralis_Contig19.112.4 ID=mRNA_P-littoralis_Contig19.112.4|Name=mRNA_P-littoralis_Contig19.112.4|organism=Pylaiella littoralis U1_48|type=CDS|length=936bp|location=Sequence derived from alignment at P-littoralis_Contig19:483856..490043- (Pylaiella littoralis U1_48)
ATGACCAGGCACAAGAGAGAGCTGAAAGCGCTCGATGGCACCAGGAGGAA
GCTCATCAAGCAGGCCAACAAGAACAAGAACAAGGTGGCGGAAGCGGAGG
CGAAGATCGCCGAGATGGACCTCGAGACGAAAGACCGGCATCGGCGAGAG
CTAGAAGCGGCCGCCGCTACCGGTACCGCTACCTCCTCCGCCTCAGAACC
GACAGCCGGCGGAGAAGAGGAGAAAGGCGCCGCTGCCGCTGCCGCTGCAT
CCGAATCCGAATTCGCTGCGGCTAGCGTCAGTGGGGGAGGGGACCAGGCC
GTAGATAAGGTGGCCGAGGGAGTCGGAGGTATGTCCGTGGAGGACAGGGA
GAAGGAGAAGCGAGATCAGAAGAGGGCCAAGGCCCAGCGAAAGCGAGAAA
AACAGCGCGAAAAGGAGGCCGAGAGAGAGCAGCGCATCGCGAAGGAGAAG
GCGGAGGGAGGGCCCAACCCTAGAGATGTGGAGATGGAAGCCCTCAAGAC
ACAGGTTGCTCCGCGAGGGTTCCGAGTAAGGGAGATCAAGGCGGATGGGC
ACTGCCTTTATCGGGCCGTGGCCGAACAATTGGGCATCACCGGGCGAAAA
GCGGGCTCAACGCAGGAGGCCTACGCGGAGATGAGACGAGAAGCTGCCAG
AGAGCTGCGATCCTGTCCAGACGAGTACCTCCCTTTCCTCGACGGGTTGG
GGGAGGGAGAGGAGTTCCAACAGTACTGCGGCAAAGTGGAGGGGAGTGCC
GAGTGGGGGGGGCAGGTGGAGCTTCAGGCCTTGTGCAGCGCGCTCGAGGT
TCCGATCGAGGTTTTCTCGGCCATGTCTCCGCCGCTGCTTCTGGGGGAGG
GGCACGGGGGAGCCCCCCTGATGCTTACGTACCACGAGCACTACTACGCC
CTCGGTGCTCACTACAACTCCGTGGTGCCGGCCTGA
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