|
|
Homology
BLAST of mRNA_P-littoralis_Contig19.106.1 vs. uniprot
Match: A0A6H5KZI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZI1_9PHAE) HSP 1 Score: 511 bits (1317), Expect = 1.700e-166 Identity = 295/453 (65.12%), Postives = 339/453 (74.83%), Query Frame = 2
Query: 830 TAVTGGVADVSEPHAQTAGNVSTGRAKNATSGTDLNAGKTIKRRRPTGSGETSSRTVTGGTAPPPKLRRVGGTGXXXXXXXXXXXXXGKPRKLKRKPRSPSS-GGEGAAPGVKALVVTDDMELEDMMSLVKDVLERLGETERELRKLRKEGSLAKPSRSEVRDRKFVIDTRAKMIGAAFVGSVAGMVVGWSVLPNLWLVGAVTGALAFAAFAHSSTGTVGNICSTCGIQVALIYKDIRDWWEQTVFLYKTGKLSYTYWRGFERYDQAWGLSSKYTETVAKLSKEALELDRQYKIRQKALRAGKRLTKLSRRVGSSAAKEATNFAGTASDWGTGQLRQWGLLGEDDLDAADRKKSGVFGGFMKKGGGKGGGRGVKRPLGFSMLLDGVFGERRRSIYSAPPAGGTRKPGYRGDPVIPARIRHLFMTSKQIRDERLQKYRVGFMGTRRSRKFDKND 2185
TA + G+ VS+ A+ G S G A +G LN KTI+RRR GS SSR GT+ PPK RRVG T GK RKL+R P S G G GV+A+VV DMEL +M ++ VLERL ETEREL++++KEGSLAK +RSEVRDRKF+IDTRAKM+GAAF GSVAGM+VGWSVLPNLWLVG VTGALAFAA + SSTGTVG ICSTCGIQVAL+YKD+RDWWEQTVFLYKTGKLSYTYWR FERYDQAWGLS+KYTETVAK+SKEALELDRQYKIRQK LRAGKR+T++SR+VGSSA +E T AGT SDWG +LR+WGL+G+D R K K+G G G KRPLG S++LDG+FGER RS+YSAPPAGGTR Y+ DP+IPARIRH+FMT KQIRDERLQKYRVGFMG R R FDK+D
Sbjct: 142 TAASEGMTGVSDLDAKE-GKDSAGHANGPMTG--LNGSKTIRRRRINGSSTPSSRASAPGTSRPPK-RRVGVT-----PTTSGSGAVGKKRKLQRPRSGPGSVSGGGGGRGVQAVVVRGDMELAEMSEMMSLVLERLSETERELKRIQKEGSLAKTNRSEVRDRKFIIDTRAKMLGAAFAGSVAGMIVGWSVLPNLWLVGGVTGALAFAALSRSSTGTVGTICSTCGIQVALMYKDVRDWWEQTVFLYKTGKLSYTYWRVFERYDQAWGLSAKYTETVAKVSKEALELDRQYKIRQKTLRAGKRITRISRQVGSSAKQEVTTLAGTVSDWGGNKLRKWGLMGDDLDPRRKRNKLTELLKLKKRGDG-----GAKRPLGVSVVLDGMFGERSRSMYSAPPAGGTRIKTYKADPLIPARIRHMFMTKKQIRDERLQKYRVGFMGMRVPRSFDKDD 580
BLAST of mRNA_P-littoralis_Contig19.106.1 vs. uniprot
Match: D7FLU1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLU1_ECTSI) HSP 1 Score: 481 bits (1238), Expect = 7.970e-157 Identity = 254/343 (74.05%), Postives = 290/343 (84.55%), Query Frame = 2
Query: 1157 GVKALVVTDDMELEDMMSLVKDVLERLGETERELRKLRKEGSLAKPSRSEVRDRKFVIDTRAKMIGAAFVGSVAGMVVGWSVLPNLWLVGAVTGALAFAAFAHSSTGTVGNICSTCGIQVALIYKDIRDWWEQTVFLYKTGKLSYTYWRGFERYDQAWGLSSKYTETVAKLSKEALELDRQYKIRQKALRAGKRLTKLSRRVGSSAAKEATNFAGTASDWGTGQLRQWGLLGEDDLDAADRKKSGVFGGFMKKGGGKGGGRGVKRPLGFSMLLDGVFGERRRSIYSAPPAGGTRKPGYRGDPVIPARIRHLFMTSKQIRDERLQKYRVGFMGTRRSRKFDKND 2185
G KA+V DMEL +M ++ VLERL ETEREL++++KEGSLAK +RSEVRDRKF+IDTRAKM+GAAF GSVAGM+VGWSVLPNLWLVG VTGALAFAA + SSTGTVG ICSTCGIQVAL+YKD+RDWWEQTVFLYKTGKLSYTYWRGFERYDQAWGLS+KYTETVAK+SKEALELDRQYKIRQK LRAGKRLT++SR+VGSSA +E T AG+ASDWG +LR+WGL+G DDLD R+K +K K GG KRPLG S++LDG+FGER RS+YSAPPAGGTR ++ DP+IPARIRH+FMT KQIRDERLQKYRVGFMG R R FDK+D
Sbjct: 102 GSKAVVAKGDMELAEMSEMMSLVLERLSETERELKRIQKEGSLAKTNRSEVRDRKFIIDTRAKMLGAAFAGSVAGMIVGWSVLPNLWLVGGVTGALAFAALSRSSTGTVGTICSTCGIQVALMYKDVRDWWEQTVFLYKTGKLSYTYWRGFERYDQAWGLSAKYTETVAKVSKEALELDRQYKIRQKTLRAGKRLTRISRQVGSSAKREVTTLAGSASDWGGNKLRKWGLMG-DDLDP--RRKRTKLTEILKLKKSKVGG--AKRPLGVSVVLDGMFGERSRSMYSAPPAGGTRIKTHKADPIIPARIRHMFMTKKQIRDERLQKYRVGFMGMRVPRSFDKDD 439
BLAST of mRNA_P-littoralis_Contig19.106.1 vs. uniprot
Match: A0A836CAQ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAQ6_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 6.010e-19 Identity = 71/189 (37.57%), Postives = 100/189 (52.91%), Query Frame = 2
Query: 1166 ALVVTDDMELEDMMSLVKDVLERLGETERELRKLRK---EGSLAKPSRSEVRDRKFVIDTRAKMIGAAFVGSVAGMVVGWSVLPNLWLVGAVTGALAFAAFAHSSTGTVGNICSTCGIQVALIYKDIRDWWEQTVFLYKTGKLSYTYWRGFERYDQAWGLSSKYTETVAKLSKEALELDRQYKIRQKAL 1723
ALVV M +D +L+++VLERL E++L++++K E + PS + R RKFVID RA +VAL+YKDI+D+++QTVFLYKTGKLSY YW ++ YD+ + L++KY +A++SKEA E+DRQYKIR KAL
Sbjct: 87 ALVVHKGMTDKDTSALLQEVLERLNMAEKDLKQMKKKMGENGIEVPS-GKGRSRKFVIDKRAT-------------------------------------------------------KVALVYKDIKDFYDQTVFLYKTGKLSYQYWSMWDDYDRRFQLTAKYNGFMARVSKEAYEIDRQYKIRNKAL 219
BLAST of mRNA_P-littoralis_Contig19.106.1 vs. uniprot
Match: A0A7S3YL52_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YL52_HETAK) HSP 1 Score: 82.0 bits (201), Expect = 1.450e-13 Identity = 46/123 (37.40%), Postives = 72/123 (58.54%), Query Frame = 2
Query: 1352 GAAFVGSVAGMVVGWSVLPNLWLVGAVTGALAFAAFAHSSTGTVGNICSTCGIQVALIYKDIRDWWEQTVFLYKTGKLSYTYWRGFERYDQAWGLSSKYTETVAKLSKEALELDRQYKIRQKA 1720
G+ ++ GM++G SV NLWLVGA GA F +G +G G+ VAL Y D+ +++ TV+LYKTG L TY++ FE D+ + + KY VA++ E ++DR++ I +K+
Sbjct: 50 GSVAACTLIGMIIGKSVSSNLWLVGAAAGAY-FGTITAKQSGLIGVRVRKLGVWVALRYIDVAKFYQDTVYLYKTGVLGATYYKKFEELDKQYKIVDKYESAVARIQGEYAKVDREFDITEKS 171
BLAST of mRNA_P-littoralis_Contig19.106.1 vs. uniprot
Match: A0A7S4A9H9_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4A9H9_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 2.190e-8 Identity = 39/111 (35.14%), Postives = 59/111 (53.15%), Query Frame = 2
Query: 1352 GAAFVGSVAGMVVGWSVLPNLWLVGAVTGALAFAAFAHSST-------------GTVGNICSTCGIQVALIYKDIRDWWEQTVFLYKTGKLSYTYWRGFERYDQAWGLSSK 1645
G + G GMV+G ++LPNLWLVG + G+ + + T VG +CG Q+A Y + D+W+ FLYKTG+LSY Y++ +E D+ + + SK
Sbjct: 250 GTSVAGCFLGMVIGITILPNLWLVGGILGSF----YGYEITKIVSTEDNNLKDSNIVGKFLISCGRQLARAYLQLVDYWKGLWFLYKTGQLSYEYYKTYENLDKKFAVQSK 356
BLAST of mRNA_P-littoralis_Contig19.106.1 vs. uniprot
Match: A0A482S7I6_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S7I6_9ARCH) HSP 1 Score: 61.6 bits (148), Expect = 3.660e-6 Identity = 31/89 (34.83%), Postives = 55/89 (61.80%), Query Frame = 2
Query: 1379 GMVVGWSVLPNLWLVGAVTGALAFAAFAHSSTGTVGNICSTCGIQVALIYKDIRDWWEQTVFLYKTGKLSYTYWRGFERYDQAWGLSSK 1645
GM++G+S+L LWL+G + GA A+ H ++ T G G+++A + D+++ + Q V Y+TGKL+Y + +E YDQ + ++ K
Sbjct: 175 GMLIGFSLLDKLWLLGGIAGACWAASIVHRNSPT-GRFARKIGVEIARMLIDLQEKYNQAVIFYRTGKLAYVSSKIWENYDQKFSITRK 262
BLAST of mRNA_P-littoralis_Contig19.106.1 vs. uniprot
Match: A0A7S2S2B2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2B2_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 2.840e-5 Identity = 38/122 (31.15%), Postives = 66/122 (54.10%), Query Frame = 2
Query: 1355 AAFVGSVAGMVVGWSVLPNLWLVGAVTGALAFAAFAHSSTGTVGNICSTCGIQVALIYKDIRDWWEQTVFLYKTGKLSYTYWRGFERYDQAWGLSSKYTETVAKLSKEALELDRQYKIRQKA 1720
AA G+V G V+G SV P LWL+GAV GA A A S G G+ + ++ W + F+Y +G+L+Y + + +Q + +S+K+ + V+K++ + + +Y+IR +A
Sbjct: 98 AAICGAVGGCVLGKSVSPRLWLLGAVLGACTAAIAAARSDGYAGSAARLVARRALEWVSFAKEKWAELAFMYNSGRLAYQWDKWLSEVNQEYDISTKWGKFVSKVA----DYEEKYEIRGRA 215
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Model size | 3221 |
| Hectar predicted targeting category | other localisation |
| Exons | 8 |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-26_001260.1 |
| Cds size | 2100 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680789910.5214467-UTR-P-littoralis_Contig19:472458..472546 | 1680789910.5214467-UTR-P-littoralis_Contig19:472458..472546 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig19 472459..472546 + |
| 1680789910.6260438-UTR-P-littoralis_Contig19:482318..483351 | 1680789910.6260438-UTR-P-littoralis_Contig19:482318..483351 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig19 482319..483351 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680789910.5381176-CDS-P-littoralis_Contig19:472546..473404 | 1680789910.5381176-CDS-P-littoralis_Contig19:472546..473404 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig19 472547..473404 + |
| 1680789910.5508444-CDS-P-littoralis_Contig19:475811..476165 | 1680789910.5508444-CDS-P-littoralis_Contig19:475811..476165 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig19 475812..476165 + |
| 1680789910.558854-CDS-P-littoralis_Contig19:476592..476687 | 1680789910.558854-CDS-P-littoralis_Contig19:476592..476687 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig19 476593..476687 + |
| 1680789910.5671575-CDS-P-littoralis_Contig19:477092..477210 | 1680789910.5671575-CDS-P-littoralis_Contig19:477092..477210 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig19 477093..477210 + |
| 1680789910.575972-CDS-P-littoralis_Contig19:479141..479205 | 1680789910.575972-CDS-P-littoralis_Contig19:479141..479205 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig19 479142..479205 + |
| 1680789910.5855381-CDS-P-littoralis_Contig19:479603..479751 | 1680789910.5855381-CDS-P-littoralis_Contig19:479603..479751 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig19 479604..479751 + |
| 1680789910.6021652-CDS-P-littoralis_Contig19:481268..481614 | 1680789910.6021652-CDS-P-littoralis_Contig19:481268..481614 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig19 481269..481614 + |
| 1680789910.6135902-CDS-P-littoralis_Contig19:482201..482318 | 1680789910.6135902-CDS-P-littoralis_Contig19:482201..482318 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig19 482202..482318 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig19.106.1 >prot_P-littoralis_Contig19.106.1 ID=prot_P-littoralis_Contig19.106.1|Name=mRNA_P-littoralis_Contig19.106.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=700bp
MHTSNKSDPMAKAVSQPRNRHIVAVIALLVSSAEGFAPRQQQTHPLRYNH QSAFSAATGAGRSLHPWGGVGYSCRGCQRRQACGGGAGIDERLRPVGLLR GTGLALGDATGKAQPERSPLHFTARRGTSNPGWRSASASSSSSSSSSSSR RRRSSSSPMMALHFPKPPKLPKLPSSGDGKTLDGGRKSALGKKAGTSAAS ASSPAGSKDSSNSSSSSGNSSSSGSSSSSTSVTTRDTSSVAGKTGTRTAV TGGVADVSEPHAQTAGNVSTGRAKNATSGTDLNAGKTIKRRRPTGSGETS SRTVTGGTAPPPKLRRVGGTGTGTGTGTGTGTSVGKPRKLKRKPRSPSSG GEGAAPGVKALVVTDDMELEDMMSLVKDVLERLGETERELRKLRKEGSLA KPSRSEVRDRKFVIDTRAKMIGAAFVGSVAGMVVGWSVLPNLWLVGAVTG ALAFAAFAHSSTGTVGNICSTCGIQVALIYKDIRDWWEQTVFLYKTGKLS YTYWRGFERYDQAWGLSSKYTETVAKLSKEALELDRQYKIRQKALRAGKR LTKLSRRVGSSAAKEATNFAGTASDWGTGQLRQWGLLGEDDLDAADRKKS GVFGGFMKKGGGKGGGRGVKRPLGFSMLLDGVFGERRRSIYSAPPAGGTR KPGYRGDPVIPARIRHLFMTSKQIRDERLQKYRVGFMGTRRSRKFDKND* back to topmRNA from alignment at P-littoralis_Contig19:472459..483351+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig19.106.1 ID=mRNA_P-littoralis_Contig19.106.1|Name=mRNA_P-littoralis_Contig19.106.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=10893bp|location=Sequence derived from alignment at P-littoralis_Contig19:472459..483351+ (Pylaiella littoralis U1_48) GAAAGTTGTTCTGCTGTTCCCTCTCCTGGGGCGGTGGTCGCTGATCGTAC
AGCAGTGCTTTGGAGTATGATCACCACAGCAGTCTTGAATGCACACTTCG
AACAAGAGCGATCCGATGGCGAAGGCCGTTTCGCAGCCACGGAATCGGCA
CATTGTTGCCGTGATCGCTCTTCTCGTCTCTTCTGCGGAAGGCTTCGCGC
CGCGGCAACAGCAGACGCACCCGCTGCGATATAATCATCAGTCAGCATTT
TCAGCAGCTACGGGAGCAGGGCGGTCTCTACATCCATGGGGTGGGGTCGG
CTACAGCTGTCGCGGCTGCCAACGACGGCAAGCGTGCGGTGGTGGTGCTG
GTATCGATGAGCGACTGCGGCCAGTAGGCCTGCTGCGTGGAACGGGGCTA
GCGCTCGGAGATGCAACGGGAAAAGCGCAGCCAGAAAGAAGCCCGTTACA
CTTCACTGCAAGGAGGGGCACGAGCAACCCGGGATGGCGCTCCGCCAGCG
CCAGCAGTAGCAGCAGTAGCAGCAGCAGTAGCAGCAGGCGGAGAAGGAGC
AGCTCGTCACCAATGATGGCATTGCATTTCCCGAAGCCTCCCAAATTGCC
AAAGCTTCCATCCTCCGGGGACGGAAAAACTCTTGATGGGGGACGGAAAT
CTGCACTGGGGAAAAAAGCAGGAACCTCGGCGGCCTCTGCCTCCTCCCCC
GCTGGCTCTAAGGACAGCAGCAACAGCAGCAGCAGTAGCGGTAACAGCAG
CAGTAGTGGCAGCAGTAGCAGTAGCACATCGGTAACGACGAGGGACACAT
CGTCGGTTGCGGGGAAGACGGGGACACGGACCGCCGTGACCGGGGGCGTG
GCCGACGTCTCGGAGCCGCACGCACAGACGGCGGGGAATGTTTCCACGGG
GCGTGCAAAGAATGCCACCAGTGGGACGGACCTGAACGCGGGCAAGGTGA
GCGAGCAGTGTTTTTTTTTCATGTTGAAGTAGAAAGTGTTACACACGAAG
CACTTACCTTTCCTTGTACACCTCTTCAACCTTCGGTATGGAGTGGGTGC
ACCAGCCGTGAGGGGTCTGGGCCCGGATTAACGGAGAATTGAAAAAATCG
AAATTGCGAAAACGAAAACGAAATAACTTCTTCGTTCTTCTAAATAATAA
TAAAAAAATAGTTGTTGAGTACAAGTATTAACGGAACGAGCATCCTTTTT
TTTTTTCGCGCTGCTGCAGCGGACCTGGTACCAGGGTGGAGAAGAAGAGG
GGATACAGCAGTACACGAGAGGACACCGATTGCGATGACTTTTGATATTT
TTTGGATGGCTGATTGCTTGTTTCCCGTCACGCTCGATACTCACCGACCC
CACACCTTGGGTGTTCCCGATGGACATTAGACCCATCTCTCTAGGCACGC
AGTTGGTCGGGAATTTCATCCGTTTTCCGGCGAGATATCAGTGGAAACGT
GAACTTGGCTGCTTGCGAACTCACCCGAAAAAGCGGCTCAAAGCAAAAGC
GGGTCGTTGTGCACGAGTTGAAAACTTTTTTCGCGTCACGCTTGACACCC
CACTGCCCCAAACCTTGGGCATTCCCAATTCACTTCAAACCCACCTCTCT
AGACATGCAAATAGCAGGGAATTTCGTCGCTTGTGTCGCGAGTTATCAGT
CAACATGTGAACTTGTCTGCTGTACAAAAGTCTACCGGAGATACCTCGCA
GAGCTGAAGCGTCCCCGCCTACAAGCCTAGGAGGCGGTATTTCGTTTTCG
TTTTCGCAAAAAAAAGGTCCAAAACACTTTATTTTCGCGAAGAAAAAAAC
GCATTGCCGCCTGCTCGGTGTGTGCTGAATCGGAGACACGCCTCCTTCAA
AGAAAATAACGCCTCTTTCTCTTTTTTACTCGGACCAATCAGAGCCCAAT
TTCGTTTTCTTTTTCGCAATTTCGTTTTTTTTTTCAATTCCCCGTTAATC
GGGCTCTCACACAGGCAAAAAAGAGGAAGGTTACAAAATAGTTTTCTTTT
TTTTTCTCCACGCACCAGGGGAAAGGATTGCTGTACGACCCGACTCGCAT
TAAAAACCAAAGAAGGCACGTACCGCAGGAGGAAGGATTGGGAAAAATGA
AAAATGACAAAGTTCGTGTGTGACCTTCCTCCTGTGTGACCCCGGCGGAT
GCACCCACTTCATACCGACAGGTGTAGACTGGTGCCCAGAATAAATGGGA
TGACAACACACACACACACAATCTTCTGTGGTGCGCGTGTGTGTGTGTGC
AGTGTGTGTTGTCATCCCATTCATTCTGGGCACCAGTCTACACCTCGCGG
TATGAAGTGGGTTCGTCAGCCGAGGTCACACAGAAGGAAGGTCACATACG
AGCTTTTTTGTTTTTTATTCTGTCTTTATTGCCCACACCTTCCTCCTGCG
GTGCGTGCCTTTGGTTTTTATTGCGAAGTGTGTGTGTTGTCATCCCGTTT
ATCCTGGCAGCAGTCTACACCTACCTTTCGGTATGAGGTGGGTGCGTCAG
CCGGGGTCACACAGAAGGAAGGTCACACACGAGCTTTTTCGCTTTTTATT
TCGTTCTGTTGCCCAAACTTTCCTCCTGCGGTACGTGCCTTTGGTTGTTT
GATGCGAGTCGGGTACAGCAATCCCTTCCCTCTGTTTACTCACGAGTAAT
TCGCTTTCCACCTTAGAGGCGCAAGAAACGCTCTTAGAGAGAATCGGACC
TACGACCTTTCAACTAGTAGGTCAACGAGATAACCACTAGAGCACCGCGG
CGACCGGATACAGTACTCGAGGAAAAACACTTGGCAGAAGTTTTTCCTGT
GGCACATGACACCAACACCGTGGTACCAAGCGAAGCGTTCTACTGGTAGG
ATTTAGTCGTTTGCGTGATCAGCATTGAGTTGGTGGTGTATCGCCTCTGT
GCACGGAGATGAAACAGATGGACGTTCGGCCTTCTGTTTTGTTCGCGACC
TGCCTTCGGTGTTCGGTTTTTTGTTTCCTGCTGTATGATGCTTCGTATCG
TTTCATACAAGCGCTCGGGTGAGATGGGATGACAACGCACAATACGCACA
CACAACGCAGTGCGGCAGTGCTTCTTTTGCGCGGGTAATCCTTTCCGTTC
GTGAACACGATCGATTGATCTTACTCGGGTAGGGGCAGCTCTTTCTCAAG
AAGCGCGAGCGAAGAGACATTGACCCCGTCGATCAGTATCTATTTCCGGG
TACCGGGTACACCAAACACCTTTCCCCAAGGCGGTGCCCCGACCCCCCCC
CCCGTCCCCCCCCCGTCACCCCCTTTCCTCCTTCCGCAAAACGCCAACTC
ACATTCTGATTGATGTGCGTGGCTGGCTGGTGCGCGCCTTCTTAACAATC
CAGACTATAAAAAGACGCCGCCCTACCGGCAGCGGCGAGACTTCGTCGCG
AACGGTCACCGGTGGAACCGCACCTCCCCCCAAGCTGAGGCGCGTCGGCG
GCACGGGTACGGGCACGGGCACGGGCACGGGCACGGGCACCAGCGTGGGC
AAACCGCGAAAGCTGAAACGAAAGCCGAGGAGCCCTTCGTCGGGGGGGGA
GGGGGCGGCGCCTGGCGTTAAAGCCCTTGTAGTGACGGATGACATGGAGC
TCGAGGACATGATGTCGCTCGTGAAGGATGTTCTGGAGCGGTTGGGCGAG
ACCGAGAGGGAGCTGAGGAAGCTCAGGAAGGAGGGATCTCTGGCGAAACC
CAGCAGGGTGAGGGGAGATGGTCGCGGGTGGCGGGGTTGTTGCGGATTGC
GAGACTGCTTGCCGGCGAGGCCTTTGGGGTTCTCTCGCGTGTCGCCACAA
GCAAGCCAAACATATGTGGCGATTTGAGCTGGAAACTGTCAAGTGGTGTG
CGATGCCCGGATTGTGTGCGTCAAGAGTTTCCATCTCACCCGCACATTGC
TCGGACATCGATGGTCTCCCTCGCATATTCGTGTTCATTGTTCCGTGTAC
AAGTACATGTACACATCATACGGCTGTGCCGCCGATCGTGAACCCACCGC
CTTCCCTACGGTTGAACAAGCCAAGGAGTACTAATCTAATCTCGCCGCCA
ACTTTCCGCCACATTGCCATCCCCCCCCCTATATACCGATGCTTGCCTGC
CAAACGATCTGCAAAACATCTGGAATTTTCGTAGTCGGAAGTCAGGGACC
GTAAGTTCGTTATCGACACCAGGGCCAAGATGATCGGGGCGGCGTTCGTG
GGCAGCGTTGCGGGGATGGTCGTCGGCTGGTGAGCGAACCAACATTTGCG
TGCCGCCGCTCTGCAAGCCCCCGCAACAGCTGACTTCGCGCCGTGACACA
TACCCTCGACGAAGTTAGTCAGATTTGACCCACATTTTCATCCACTATCA
AATCTAAACTTTGTCGCTTAATCTTGAGGGTCAATGGACTAAACACATGC
ACCTAGTACCTAATTACTTCTTTTTTTTTTCTATTCGAGGGTGCATGCAT
ACGTTTTTTTTTTTTTCAAACACAGCACGTGTCGGTCAGTCTGTCTGTCT
GTCTGTCTCTCTCTCTGGCTGGCTGGCTGGCTGGCTGGCTGGCTGGCTAG
CTGGCTGGCTGTTTGTCTGTGTGTGCCCACTTTTATCTGACCGGATGGAT
CGTTTCCTGCTCCGTGCCGACCGAAACGCTTTAGGTCCGTGTTGCCGAAT
CTGTGGCTGGTCGGGGCTGTGACGGGAGCGTTAGCCTTCGCGGCCTTCGC
GCACTCATCGACGGGTACAGTGGGCAACATCTGCTCCACGTGCGGGATAC
AGGTGCTACACTGTTAGAGCTGCGCCTGACCCCCCAAACGACACACAAAA
TATGGCATGATTATTCGTTTGTTTTTTGGTCGGTGACCAGGAAATAATGT
TCTTCCGCCGGTCCGGCTGATGACGCCAAAACTCTTTTTTACTTGAATAA
ACATTGCTTTCAACACAAACTCGCAACGAGTAATACTCGACTTAGGCAAA
CAGCTGGCTCAATCAGTTCCGAACATATCTGTGTACATGGGAGATCTAGT
GTCTGTCCGCAAAGTTTTACTCTTGGATGTTTGTGCGCCCTTTGCGACTC
TAAAACCCAGTTATTTTCGGAGTTTTTCTTCCCTTTTCAGCGGCTATCTC
TTTTTGGTTCAGTCCGTTCGCAAATCCTTTGCGTAGAGACTTTAGCTAAG
GCATCTTTATCTGGTAACGCAGCCAACCACGTGCCGACCCGCGTAGTACC
AACGGAGCGCCCCAAAGTGCAAAAAGAGCACTCTGGGCTGAAAAAGGCAA
GGTCAAATCGTCAGAAAACACTCAGCTCAAAACGATCCGTTCCGAAAAAA
TGGACGTGAAGTACGTTTTCGTTTTGGCAGTTTTGGTCTGAAATAAAAGC
TACATAAGGACGCCGAGCTCACGCACCGCCATGGAAGCCCCATCTACTCG
CGGCAGTCTTGCAGCAGTCTCTCACGCCCGTGTGGATGTACCACTGGGCA
GATGTTGCAAAGGACAGGTGCAGGTGCTATGCAAGACAAAGGCAAGTTGG
TGTGTTTTCGGTGGAACCAAGAAGCATGACAGAGGGAAGTCGGAACAAAA
AAAGGGTCGAAATACGCCGAAAACACACCAACTTTTTTTGCTTCACACAT
CACCCACACGAGCTTCTATTCGTGCACCTGCCCGGCGGGTGGCACTACAC
AAGCGCAGAAGACTGCTGTAAGTGGGTTAGGGCTGCTCGTGAACTCGGCG
CAGCAGAAATTTGCGAGGGGACGGAAACTGCAAAACAAGAACCAAGTCAA
CGAAAACATACAAGTACACTTTTTTACTAGCCACGCACACATCATTTGTT
TCCTCGTCGGAACGAAGTGAAAGAAGAAGACCGAAAATACGCCGAGAACC
AACCACCTTGTTTTGCTCTACATGGCACCCACAAAAGCGCCTATTGGTGC
ACCTGCCCGGCGAGAGGCATCGCACGAGCGTAAAAGGCTACTGCTGTGAG
TGGGTGGACGGTCGTCACGGTGGGTGAACTTGAAGCAGCAGTGTGGATGA
CACAGGCATTCAAAAGCCAAGAAACCAGTCCGTACAAATACATCTGAAGA
CCACGCGCACACAACACCATTTGAACTTCATTGTCTCGTTCTCGTCAGCT
GCTCTCGCTGCTAGCTGCTGCTGCTGGCGATGGACAATGATAACCTGCAA
ATCGCCGTCAAACAGTGCTGCTGTGCTGTGTATTCGACCTGTGTTACTAC
TGCTGTGCTGGGCGTAGAGCAGTGGGAAGCTTGTGTGATCGCCATGATAC
GTGTGTGACCAACAATTTTGTGTCTGGAGGTGTGAGAGGTGAGAGGCCTG
GACGCGAGTGCAAATCTTTGAATCTTTGAATCTTTGGCTTACGTACGCGC
GTAAATGATCCCCAAAAGACGTGTTAACAAAAAGAAAAAGATAACTGTTC
AGCTTTCTCGGAACACCATCGGGACAGATTTAGTACCCAAAAAGAGGGGT
CAGGCGCAGCTCTAACTGTCACCCTCAACATTATGCGTGCGCATATCACT
TTCACACGCCGCTGCCGCTGCTGTTTCCGACGCCGCTGCTGTTTCCGCGG
CGGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTTTATTGTCGTTTTGC
TCCCGCTGATGCCAAGGCTGTCGTTCTAAGCTTCCCGTGCGGCCTGCCCG
CTCCCTCCCCCCCCCCCCCCTTCCAAAAAAAAGGTGGCCTTGATTTATAA
AGACATCAGGGACTGGTGGGAGCAGACGGTCTTCCTGTACAAGACCGGTG
AGTCGACGAAGGGAAGGGATTCTAAAAAGTAGCGGTACTGATTGTACACC
TTGTTTCGTCTTCAGTTTTTTGTCGGAGCGATACAGTAGCGTAAAAGCCG
TTGGAAGTGGTGGCCAGTGGCGGCCGGCATCTTCCTGGCACTTCGAAGGC
GGACACACGCTGCGTGAATACTTTTACTCTGTGACCAACCGAATCGAGTA
CGCCGTCACCGTTATCTCTTTAATCGGTATTCCCGTACGCGCGACTTCCC
TCAAAACGTCATAGTCCATGGCACCCTTTCTTTTTTTTGCCGTGCTGACC
GTTTTTTTTTTTTTTGTGGTGGAACAGACCACCGCCTCCGCCTCCGCCAC
CTCCGCCGCCGCCGCCGACATAAAAAACCAAACAATAATAAACAGGAAAG
TTGTCGTACACCTACTGGAGGGGTTTCGAGCGTTATGATCAGGCGTGGGG
GTTGTCTTCGAAGTACACCGAAACCGTGGCAAAGCTTTCGAAGGAGGCGT
TGGAGCTAGACCGACAGTACAAGATCAGGCAAAAAGCTCTGAGGTAAGTG
TGGCGTCCAGAGGGCTACTGTATGGTGGGAGTCGAACAGCTGGACGCCTC
TACGAAGTTTAGTTTGTCTGGGGTGAGCAAGTACGGCGTGTGGGTGTTTG
TTGGTCGATTTTTCTTCTGCTCTTCCGTGCCGATTGGTGCGATAGCGAGT
ACAGCAGTAGAGTGCTAGATTCGGCAAGAATACTCCTGAGGTAAGCACGG
TGCGCAGACGAAGTTCGATTCGTCTGGGGTGGGCAGGCACGGCGTGTTGG
TGTTTGGTGGTCGATTTTGCTTTGGTCTTTCCATGCCAGTCGGTGTGATG
GCGAGGACAGCAGTAAAATGCGAGATTCGAACAGAACACTATTGAGGTGC
GGTGATGGGAGGGCTATCATATAGTAGGAGTCGAACAGTTTGACGCCCAC
AAAGTTTGATTCGTCTGGGGTGATCAAGCACGGCGTGTGAGTGTTTATTG
GTCGATTTTTCTTCTGCTCTTCCGTGCCGATTGGTGCGATAGCGAGTACA
GCAGTAGAGTGCGAGATTCGACAAGAAATCGCCTGCGAGTCATGTGAGGG
GTGCAGACAGCGACTGTTGGAAAGACAGTATGGCATTTCACAAGATTCGG
CAAGAAAACTCCTGAGTCTAAGCAAGGTGTGCAGACAGCGACTGTTGGAA
AAACATTACAACATTTTATTCTGCTCAAGGTAAAGTGTGCAAGGAGCAGG
GTGCAAGGGACCGGTCGCAGAAAAGGGGCCGTTCCCGCTAAGATAGGGAG
CGCAGAAAGCGAGTGGTCGAAAAACAGCACACACAACAGTAGATCGAACC
CGGCTTCAAGGACACCCCTAGGTATCGATATCGTCCCAGAACAATTTTTC
TTGCGCGAGGACGTGCCCTTAACATAAGATTCAAGGGAATGACAATCACG
CTGGCGATTATGCATCCTGAGGGGCACTTGGTTCTGGAGAAACACGTGTG
GTTCAAGTACGAGGAGTTTCCATGTGAAGGGTGTCGTGCAGCCAGCAGGC
ACAGGGGTAGGCTGGTCGATTTAGCGCTTTCATGCGGACCGGTATGGTAC
GGCATCGAGTGGTGCAAACAGTACTAGGTTCGGCCGAACAATGTCGCGTG
TGCAGAGGCGAAAAAAAACGAGGAGTAATGCGCCAAGTGTTACACGGCGG
TATTTGGTAGTCAGGGACTCCACCCACAGGACGCAACGACAAGCCGCGAA
GCAGCGCGATGTCAGACGTTCGGCTTCTCTCTCCCTCCGTCCGGGTAACC
ACCACGGCTCACGAACATGTGTGTGCTCACACGACTGAGAGTGCTTCGAC
CGTCAACGGTAGATGTCCCGAGACATATCATATCACCTCCATGTCGTGCC
CTCACTCGACTCCCCCCCCCCCCCGCCCGTGCTTTTTCCCCTCGCTCTGT
CTGCGCCCGTTTCCACGAATAACCACACTTCTTCTACACGGCCGTGCTAT
ACCCCCGTCACTCCCGACAAAACACGCCACACACACTCACACACGAAACA
AAAAAAAAAGAGCCGGCAAGCGGCTGACCAAGCTTTCCCGACGGGTGGGA
TCCTCCGCCGCAAAAGAAGCCACGAATTTCGCGGGCACCGCCTCGGACTG
GGGGACTGGCCAGCTGCGGCAGTGGGGGCTGCTTGGGGAAGATGACCTCG
ACGCGGCGGACAGAAAAAAGTCGGGCGTGTTTGGTGGGTTCATGAAGAAG
GGCGGCGGTAAAGGCGGCGGCAGAGGCGTGAAACGTCCCCTGGGGTTTTC
CATGCTCTTGGACGGCGTTTTCGGAGAGAGGAGGCGGTCGATATACTCGG
CGCCGCCGGCGGGAGGTACGAGGAAGCCGGGCTACCGGGGCGATCCCGTC
ATTCCGGTGAGAACCGACGGAGCAGATTGGATTTCTGCGGGAACATGGTG
CGGTGGGCCTGTCTCTCCCTTTTCTTTCTGTTGCGTGTCTCTCTCATCTC
TCCCGTGTCTCTCTCTGTTTCTCTCTGTCTATTACGCTCTCTCTCTTCTT
TCTCTATTTTCTTTTGATCTCTGTTTCCTATCTCAAGTGTCTCCCGTTTC
TTTCGCGACGACGATCGATCACCGGTCTCGCGGGGTTAGCGGCGCTCGCT
ACGCAAGTGCTTTCCGGGGGGGGGGGGGGGGGGGGCAATGTTCATGTTTC
CTTGGGCTGAACAACCTGCAATCCTGTGTCCTAGGAAGAGGAATAAGGAA
CATTCCCTTCTGTGTCTTAAGGGGAGGAATTTTCCCGTCCCCCGTCCTCC
ACCTTCTCGGTAGACGGCCGCCTCAAGGATGGCTTCATACCGCCGCGCTC
GTTGTGTCATGGTTTGTATGTGTTTTTTATTTATGCTTCATATTGTGTTC
GTTTCTTCATTTATTTTTAATTTTTTAATTTCGTTTCTGTCCTGTGCGTG
CGTGTGTGTTTGTGTGTGCGTGTTTCGTTTTTGTTATTCCCAGGCCCGCA
TCCGGCATCTGTTCATGACCTCGAAGCAGATCCGCGACGAGAGGCTTCAG
AAGTACCGCGTCGGCTTCATGGGGACGCGCCGATCTCGAAAGTTCGACAA
GAACGATTGAGAGACGTTGATATAATGGCGTGTTCCGAGGATAGCCCGAA
AGAGTATTCATCCTAAACCTTACCCTGTCCTTGAACCTTGATCCGGGGGT
GCTTTCCCCCGGGATAACCCCCACCGCGATGCCATCTTGTCAGCGGAGCG
CACCCACCCTCTTACTTAGGTGTAAAAAGACAAAAGACCATGGCATCCTC
TCGGTAGGAATCCTGTGTTGGTCCTCTGTTGTTCGTTGATATCATACCCA
AGGGGGCACGTACTTGGTATCCCGTGGTAAATGAGATGGCCTCACTTGTA
GCCATTTCTTTCTCCGCCAACGCGTGTTGGAATGCCATGTCCATGGTAGG
TACGAAGCGACATTTGATTCGCTGGGACGCCGCCCGAACACGAGTGATCT
GATGGTATGTTCCCAGCGACCACGTGTGCGGGGGGTTGATCTGCTTATAG
AGCCCCCTCAGCCCCCTCAAGTAAATTGTGAATACCTCATGTGTTGTATA
CGGTGCATGTCGCACCACTACTGTGGTATTGGAGGTTGTCCTTTGGTGAC
CCAGTCGAGCGCGCGAAAATCTTATGAAAAAATAAAATAAGAACGCCTCT
TTGTGTCTGTAAGAAAAACCAGAAAGCCCTCTCTATACATGATACGTGCG
TGTTCGTGACGTTGTGAACACGATCTGTCCAAAATCACGTTGTTACCGTA
ACGAGCTACGGTAGGTCGGAAGCAAACGGGATCATGAGGTGCGAGGCCCT
GCAAAAAATAGGGCTGAATCGTTGGCGGCAGTACAGCAGCAGTAGGCGTA
CGTTGCGCACACCGCTGAACGAGGTATCACATGAATGAGTCGAAAACATT
TCGTGGGTTGGTATGCAGGGAGCCGTCGCAACGATGTGAAGTGAGGTCAA
TGAAGATGATTGTTCTTCGATGAGGCGGTGTCTTCGTGGACATGGTAAAT
GTGGCCAAAATCCACAGCAGGAGTTTTCTAGTGAGGTGAGTATTCTCCAA
CAGCCACAACTGAAGCTCAACCCTAACTTGAGGGAAATCAGAC back to topCoding sequence (CDS) from alignment at P-littoralis_Contig19:472459..483351+ >mRNA_P-littoralis_Contig19.106.1 ID=mRNA_P-littoralis_Contig19.106.1|Name=mRNA_P-littoralis_Contig19.106.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2100bp|location=Sequence derived from alignment at P-littoralis_Contig19:472459..483351+ (Pylaiella littoralis U1_48) ATGCACACTTCGAACAAGAGCGATCCGATGGCGAAGGCCGTTTCGCAGCC ACGGAATCGGCACATTGTTGCCGTGATCGCTCTTCTCGTCTCTTCTGCGG AAGGCTTCGCGCCGCGGCAACAGCAGACGCACCCGCTGCGATATAATCAT CAGTCAGCATTTTCAGCAGCTACGGGAGCAGGGCGGTCTCTACATCCATG GGGTGGGGTCGGCTACAGCTGTCGCGGCTGCCAACGACGGCAAGCGTGCG GTGGTGGTGCTGGTATCGATGAGCGACTGCGGCCAGTAGGCCTGCTGCGT GGAACGGGGCTAGCGCTCGGAGATGCAACGGGAAAAGCGCAGCCAGAAAG AAGCCCGTTACACTTCACTGCAAGGAGGGGCACGAGCAACCCGGGATGGC GCTCCGCCAGCGCCAGCAGTAGCAGCAGTAGCAGCAGCAGTAGCAGCAGG CGGAGAAGGAGCAGCTCGTCACCAATGATGGCATTGCATTTCCCGAAGCC TCCCAAATTGCCAAAGCTTCCATCCTCCGGGGACGGAAAAACTCTTGATG GGGGACGGAAATCTGCACTGGGGAAAAAAGCAGGAACCTCGGCGGCCTCT GCCTCCTCCCCCGCTGGCTCTAAGGACAGCAGCAACAGCAGCAGCAGTAG CGGTAACAGCAGCAGTAGTGGCAGCAGTAGCAGTAGCACATCGGTAACGA CGAGGGACACATCGTCGGTTGCGGGGAAGACGGGGACACGGACCGCCGTG ACCGGGGGCGTGGCCGACGTCTCGGAGCCGCACGCACAGACGGCGGGGAA TGTTTCCACGGGGCGTGCAAAGAATGCCACCAGTGGGACGGACCTGAACG CGGGCAAGACTATAAAAAGACGCCGCCCTACCGGCAGCGGCGAGACTTCG TCGCGAACGGTCACCGGTGGAACCGCACCTCCCCCCAAGCTGAGGCGCGT CGGCGGCACGGGTACGGGCACGGGCACGGGCACGGGCACGGGCACCAGCG TGGGCAAACCGCGAAAGCTGAAACGAAAGCCGAGGAGCCCTTCGTCGGGG GGGGAGGGGGCGGCGCCTGGCGTTAAAGCCCTTGTAGTGACGGATGACAT GGAGCTCGAGGACATGATGTCGCTCGTGAAGGATGTTCTGGAGCGGTTGG GCGAGACCGAGAGGGAGCTGAGGAAGCTCAGGAAGGAGGGATCTCTGGCG AAACCCAGCAGGTCGGAAGTCAGGGACCGTAAGTTCGTTATCGACACCAG GGCCAAGATGATCGGGGCGGCGTTCGTGGGCAGCGTTGCGGGGATGGTCG TCGGCTGGTCCGTGTTGCCGAATCTGTGGCTGGTCGGGGCTGTGACGGGA GCGTTAGCCTTCGCGGCCTTCGCGCACTCATCGACGGGTACAGTGGGCAA CATCTGCTCCACGTGCGGGATACAGGTGGCCTTGATTTATAAAGACATCA GGGACTGGTGGGAGCAGACGGTCTTCCTGTACAAGACCGGAAAGTTGTCG TACACCTACTGGAGGGGTTTCGAGCGTTATGATCAGGCGTGGGGGTTGTC TTCGAAGTACACCGAAACCGTGGCAAAGCTTTCGAAGGAGGCGTTGGAGC TAGACCGACAGTACAAGATCAGGCAAAAAGCTCTGAGAGCCGGCAAGCGG CTGACCAAGCTTTCCCGACGGGTGGGATCCTCCGCCGCAAAAGAAGCCAC GAATTTCGCGGGCACCGCCTCGGACTGGGGGACTGGCCAGCTGCGGCAGT GGGGGCTGCTTGGGGAAGATGACCTCGACGCGGCGGACAGAAAAAAGTCG GGCGTGTTTGGTGGGTTCATGAAGAAGGGCGGCGGTAAAGGCGGCGGCAG AGGCGTGAAACGTCCCCTGGGGTTTTCCATGCTCTTGGACGGCGTTTTCG GAGAGAGGAGGCGGTCGATATACTCGGCGCCGCCGGCGGGAGGTACGAGG AAGCCGGGCTACCGGGGCGATCCCGTCATTCCGGCCCGCATCCGGCATCT GTTCATGACCTCGAAGCAGATCCGCGACGAGAGGCTTCAGAAGTACCGCG TCGGCTTCATGGGGACGCGCCGATCTCGAAAGTTCGACAAGAACGATTGA back to top
|