mRNA_P-littoralis_Contig19.102.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig19.102.2
Unique NamemRNA_P-littoralis_Contig19.102.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig19.102.2 vs. uniprot
Match: A0A6H5KXN8_9PHAE (RanBP2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXN8_9PHAE)

HSP 1 Score: 197 bits (502), Expect = 2.180e-47
Identity = 304/641 (47.43%), Postives = 351/641 (54.76%), Query Frame = 3 
Query: 2196 PRRRTLVERLGL-GGGGSQPHGGSQPSPEAFLSSSQGRGGWTCGQCTLFNRGRAKACEACGRAKASSPALT--RAATHGGPVGRVDGARNA--DSGGFDAVANGGSGVNGXXXXXXXXXXXXXXXXXGDSRCRSSREPRKIKNGRAGDED-VGDRGPGLGKRR------------RQDAGDDEDIEVDDAGAAAESTLAYSPDSADGNGGEGEQQATGRAGAAASGTRGXXXXXXXXXXXXAVQGFVGDDDAVCLEESEEDDWEGEGXXXXXXXXXXXXXAQD-----GDSGVEDAEVVGSQIEEVFLQSRGRPLQQXXXXXXXXXXXXXXXXXXXXXXSSKKRQRPVLPQSGLVLDLTDAVNNESS--DEDAAAAGAAVWGKGRDDGRRVPAPAGAAPNDVEEIDXXXXXXXFDLPGLRGSVAASAGXXXXXSAARQEPPRKFRCFASVREHRDRGTSCVDFASLESAPAGGPSGTKTYAARKTARDRKGKSKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRQPFGGAGGAPTASWIPAGVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGNQPRPFNHYRGNDEMVDDSIGGGGFHWEGVGQTSFG 4043
            PR+  ++ RL    G GSQ    S   P +    S  RG W CG CTL NRGRAK CEAC   ++    +T  RAA   G     D A NA  D G  D                            G    R +RE    + G  G ED VG    G GKRR            R++ G+ ED+     G A   ++         +GG GE       G  A   RG    XXXXXXX  + GFVGD D +  +  ++DD  G         XXXXXX +D     GD   E  E+V SQIEE FL+S+     +                        + R+R   P  G VLDLT+ V+N+ S  D D A  G    GKGR       A AGA   D+ +  XXXXXXXF LPGL+GS AA+AG         + PPRKFR F++VREHRDRGTSC+DFA++ +APAGG SGTK+YA RKTARDRK           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    +PFGG GG P++SWIPAGVAA        XXXXXXXXXXXXXXXXXXXXX       FNHY+GNDEMVDDSIGGGGFHWEGVGQTSFG
Sbjct:  808 PRQSRVLGRLAWDSGAGSQTSQASTGPPLSSPRGSGSRGEWECGTCTLKNRGRAKVCEACETPRSPPRGMTTRRAAGRKG-----DSADNAWSDGGADDXXXXXXXXXXXSLSGSGRGADDSGGDGDGSRPERGARE----QGGCNGGEDFVG----GAGKRRHGGSEEASSSTGRKETGEIEDVRR--TGRARNGSVGSGKGK---DGGRGEHN-----GGVAGSARGEVGAXXXXXXX-GMGGFVGDLDVLYSDIEDDDDLGGFSAGMGDDDXXXXXXDEDYLDEDGDD-FEQYEMVSSQIEERFLRSQ----PEGGVDTSPNPQGRPQSVEGLSPSPKRSRRRVPAPSPGQVLDLTEIVDNDGSGPDRDTAPRG----GKGR-------AGAGAMVEDISDX-XXXXXXXFSLPGLKGSTAAAAG-------GERAPPRKFRFFSNVREHRDRGTSCIDFAAMAAAPAGGASGTKSYAVRKTARDRK----------TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSVRPFGGTGGVPSSSWIPAGVAAGLSSSGSAXXXXXXXXXXXXXXXXXXXXXXXX----FNHYQGNDEMVDDSIGGGGFHWEGVGQTSFG 1386
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BLAST of mRNA_P-littoralis_Contig19.102.2 vs. uniprot
Match: D7FLU0_ECTSI (RanBP2-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLU0_ECTSI)

HSP 1 Score: 166 bits (419), Expect = 1.180e-37
Identity = 190/368 (51.63%), Postives = 217/368 (58.97%), Query Frame = 3 
Query: 2985 QDGDSGVEDAEVVGSQIEEVFLQSRGRPLQQXXXXXXXXXXXXXXXXXXXXXXSSKKRQRPVLPQSGLVLDLTDAVNNESS--DEDAAAAGAAVWGKGRDDGRRVPAPAGAAPNDVEEIDXXXXXXXFDLPGLRGSVAASAGXXXXXSAARQEPPRKFRCFASVREHRDRGTSCVDFASLESAPAGGPSGTKTYAARKTARD------RKGKSKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRQPFGGAGGAPTASWIPAGVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSG-------NQPRPFNHYRGNDEMVDDSIGGGGFHWEGVGQTSFG 4043
            +DGD   E +E+V SQIEE FL+S+     +            XXXXXXXXXX    R+R   P  G VLDLT+ V+N+ S  D D A  G    GKGR       A AGA   D+ +  XXXXXXXF LPGL+GS A +AG         + PPRKFR F++VREHRDRGTSC+DFA++ +APAGG SGTK+YA RKTARD      ++G  KS                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 GG P++SWIP GVAA                    XXXXXXXXX          Q +PFNHYRGNDEMVDDSIGGGGFHWEGVGQTSFG
Sbjct:  814 EDGDD-FEQSEMVSSQIEERFLRSQ----PEGGEDTSPNPRGRXXXXXXXXXXXXSSRRRVPAPPPGHVLDLTETVDNDDSGPDRDTARRG----GKGR-------AGAGAMVEDISDX-XXXXXXXFSLPGLKGSTAGAAG-------GERAPPRKFRFFSNVREHRDRGTSCIDFAAMAAAPAGGASGTKSYADRKTARDXXXXXXKRGSKKSKAPRARATAAGAAAGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------TGGVPSSSWIPTGVAAGLSSRSAGLSSSGSAAGRRAXXXXXXXXXXXXXXXRGRRQQQPFNHYRGNDEMVDDSIGGGGFHWEGVGQTSFG 1141
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig19.102.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KXN8_9PHAE2.180e-4747.43RanBP2-type domain-containing protein n=1 Tax=Ecto... [more]
D7FLU0_ECTSI1.180e-3751.63RanBP2-type domain-containing protein n=1 Tax=Ecto... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig19contigP-littoralis_Contig19:466860..471745 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size4167
Hectar predicted targeting categoryother localisation
Exons2
Ec32 ortholog descriptionZinc finger, RanBP2-type
Ec32 orthologEc-26_001270.1
Cds size3441
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789910.3986256-UTR-P-littoralis_Contig19:466859..4669711680789910.3986256-UTR-P-littoralis_Contig19:466859..466971Pylaiella littoralis U1_48UTRP-littoralis_Contig19 466860..466971 -
1680789910.434603-UTR-P-littoralis_Contig19:471131..4717451680789910.434603-UTR-P-littoralis_Contig19:471131..471745Pylaiella littoralis U1_48UTRP-littoralis_Contig19 471132..471745 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789910.410246-CDS-P-littoralis_Contig19:466971..4701701680789910.410246-CDS-P-littoralis_Contig19:466971..470170Pylaiella littoralis U1_48CDSP-littoralis_Contig19 466972..470170 -
1680789910.424008-CDS-P-littoralis_Contig19:470889..4711311680789910.424008-CDS-P-littoralis_Contig19:470889..471131Pylaiella littoralis U1_48CDSP-littoralis_Contig19 470890..471131 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig19.102.2prot_P-littoralis_Contig19.102.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig19 466972..471131 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig19.102.2

>prot_P-littoralis_Contig19.102.2 ID=prot_P-littoralis_Contig19.102.2|Name=mRNA_P-littoralis_Contig19.102.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1147bp
MCEIGGSCGMSPAGLGVVRRKASDKRGASDAGGSSLVGSTEDGCGSGGGG
GNSGDGEVKKEGPMPAGTLPFATQERKVKNKRSRLSLPTKKRAGNGRDGS
KTSSDPGTPVVTSQQRADTAGLAAKESEQAAETKQESPSTPPAAAVDGDC
RQGLDTDDTAAAVAAAAAAVAALSAGNDCELPGKDVGGAVDGVASAGGGG
DSAMDVDAVGGVASAAAAGSAMDVDADPSHPVDGGLGTAGEAGDDEHKDE
DTDIDERCGTKNPDENRAKTEGPEDLDGNGGTLSPCGGGSEEEVEEDDCG
ELVKEDSASLTVGEGERESVEGGSQEAAPVATESSNGAVAASGDAGTEAT
TGGPAQPQCRALAGCRMTMDVGSSDSDSSDDDGDTARGGAGEGGGGGAVH
LGRAFDEAVTHSSPSPYTTAAAAASPPPRSAPASVAGISEEDADQSAAAL
SPAARTPSPRRRSSRAQGKGTTVAAAAAAASPEDSQDAAAMGLVDTPPPK
KKHLPAGTAASSPSSTSSEVKKVRKKTPRRRTLVERLGLGGGGSQPHGGS
QPSPEAFLSSSQGRGGWTCGQCTLFNRGRAKACEACGRAKASSPALTRAA
THGGPVGRVDGARNADSGGFDAVANGGSGVNGGSSGGGGGGGGGSDDDGG
DSRCRSSREPRKIKNGRAGDEDVGDRGPGLGKRRRQDAGDDEDIEVDDAG
AAAESTLAYSPDSADGNGGEGEQQATGRAGAAASGTRGGRKGAAAATTAA
AVQGFVGDDDAVCLEESEEDDWEGEGGDGDDSDDEDYFDAQDGDSGVEDA
EVVGSQIEEVFLQSRGRPLQQQQQQQRSRVQSMDSSSSSNSVASSKKRQR
PVLPQSGLVLDLTDAVNNESSDEDAAAAGAAVWGKGRDDGRRVPAPAGAA
PNDVEEIDDDDDDDDFDLPGLRGSVAASAGGGSGASAARQEPPRKFRCFA
SVREHRDRGTSCVDFASLESAPAGGPSGTKTYAARKTARDRKGKSKSKRG
KRKSRAAAPRAAPRAPRATPASAGAAGHARGKGGSARGGRGGGRAGSGSF
RSGGRQPFGGAGGAPTASWIPAGVAAAAAAAARSSSSSSAGGGKRGGGGG
GGAGGSGNQPRPFNHYRGNDEMVDDSIGGGGFHWEGVGQTSFGGDH*
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mRNA from alignment at P-littoralis_Contig19:466860..471745-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig19.102.2 ID=mRNA_P-littoralis_Contig19.102.2|Name=mRNA_P-littoralis_Contig19.102.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=4886bp|location=Sequence derived from alignment at P-littoralis_Contig19:466860..471745- (Pylaiella littoralis U1_48)
AGGAGATACATGATCTGTCCGCTGATGCTGGCGCTGGTGTGGGTACGGGT
TCACGATCGGGAACGCGATCATCAGCTAGAAGAGCCAAACAGCAGCAGCA
GCAGCAGCAGCGAAAGCAGGCTGCGGCGCTCGTGATCTGCAATAGCGACG
AGAGCGAAGGAGACAGCCTTGCAGCGGCGGCGACCGGCGGCGGCGGCGGC
GGCGGCGGCGGCGGCAGTGACGACGATGACGATTCCGGGGAAACTCCGGT
GCTCCTAGGGAGGGGTTGGTCCGCTCCTCAGCGGGTCAAGGCTAAGCAGC
GCAAACTCGACCAGGAACGAGGCGGGGCAAGAGCAGGGGGAGGCAGCGGG
AGCGGAAGCGCGGCAGCTGCGGCAGCAGCCCGTCGGGGCAAGAAGCGGCA
ACGCTCCCCGCCGACCCACCCCAGCGACGACCTGTTTCGGGACCGAAAGT
ACGCGGCGGAGGAGGAGGGCGATGATGACGACGACGACGACGACAGCAAC
GACGACGACGAAGGCCGCTCCCTTACCTTACGCAGGGTCGCCGTTGTCGA
AGGCGGAAGCCGGCTGCTTTGGAGGTGGCCGCCGCCGCCCCCGAGGGCTA
CGGCGAGGACGGCGATGTGCGAAATCGGCGGCAGCTGTGGGATGTCTCCG
GCGGGTCTCGGTGTGGTTAGGCGGAAGGCAAGCGACAAGAGAGGTGCGAG
CGACGCCGGGGGTAGCTCGCTCGTTGGTAGTACGGAGGACGGGTGCGGCA
GCGGTGGCGGTGGTGGCAATAGTGGAGACGGAGAGGTGAAGAAAGAAGGA
CCTATGCCGGCGGGTACGCTGCCGTTCGCAACGCAAGAGCGAAAGGTCAA
GAATAAGTGAGTGGAAATATATGGCGTGTCGTTGCGATGCGCAAGTGGCT
GTCCGGCGGTCGTACTGGTCAATCCTTTCGACTTTGCACTGCCACCCGTA
CTGAAGTCAGGAAGAGAACATGGCATCATACCATGAAACACCGGCAGACT
CGAGAGAACCTTGTTTTCCGGAATCCACCTGGCTCGGTGATTCGCGATGT
TTTCTCTTTTTGTTTTCGTGTACAAAAGATCGGTTTTTTCTTTTCGCTTC
TCGATTGTCTCGTAAACGACGGATGACCTAGCATTGGTGAAGGTTATCTC
CGCACCGGCAGAGAGCGGGTACCGTAGCTTCATCTTCACCAGAACTGTGC
GGCGTTTTATCAATCGTGCCCATTCTTGAAACTTACGAGCTGGTTCCGGG
AGGACACAGCGAAGCAATCAATGCGTATGTACTTACAAAAGTACGTGTTG
ATTTCCATCAACACCAGTCATGCAGGTTGACCCCGTCCCCCCGATGTGCG
TGTGTGTCTATGGTCTCGCACTCACACACTGCTGCTGCTGCTGCTGCTGC
ATTGCACGTCACCCGAATCACTCAACATGAAACTCAAGCTTGCCGACACG
CTTCTCTCAATTCTCACAAAAAGTGCACCGTTGCCGTTGCTGTTTCTTGT
TTCACCACTACGGTGACCTCTCTCTCTCTGCCTCTCTGTCTCTCTGTCTC
TCTCTCCCTCTGACGCGCACACAAGACGCTCCAGGTTGAGCTTGCCTACG
AAGAAGCGCGCCGGTAACGGGCGAGACGGAAGCAAAACATCGTCAGACCC
CGGAACACCCGTGGTAACTTCCCAGCAGCGGGCGGACACAGCAGGGCTTG
CCGCGAAAGAGAGTGAACAGGCTGCAGAGACGAAGCAGGAGTCACCAAGT
ACTCCTCCTGCAGCAGCGGTTGACGGCGATTGCCGTCAAGGTCTTGATAC
TGATGATACAGCAGCAGCGGTGGCAGCAGCGGCAGCAGCGGTGGCAGCGT
TGTCGGCAGGGAATGATTGTGAACTGCCTGGGAAAGATGTAGGTGGTGCC
GTTGATGGTGTTGCTTCTGCTGGTGGTGGTGGTGATTCTGCGATGGACGT
AGATGCCGTTGGTGGTGTCGCTTCTGCTGCTGCTGCTGGTTCCGCGATGG
ACGTTGATGCTGACCCGTCCCATCCCGTGGATGGTGGTTTGGGCACCGCT
GGAGAAGCTGGGGACGATGAACACAAAGACGAAGACACCGATATCGACGA
ACGCTGCGGCACGAAAAATCCAGACGAGAATCGAGCAAAAACAGAGGGGC
CCGAAGACCTCGATGGCAATGGCGGGACACTTTCTCCGTGCGGGGGCGGT
TCAGAAGAAGAGGTTGAGGAAGACGATTGCGGAGAGTTGGTGAAGGAAGA
TTCTGCCAGCCTTACTGTAGGCGAAGGAGAACGGGAAAGTGTGGAAGGCG
GGAGCCAAGAGGCGGCGCCTGTCGCGACGGAGTCATCGAACGGGGCAGTG
GCCGCCTCCGGAGATGCTGGAACGGAAGCCACCACTGGCGGCCCCGCACA
GCCGCAGTGCCGCGCATTGGCGGGGTGCCGCATGACGATGGACGTCGGAA
GCTCGGACAGCGACAGCTCGGACGACGACGGCGACACGGCCCGGGGTGGG
GCAGGAGAAGGAGGAGGAGGAGGAGCGGTGCACCTCGGCCGCGCCTTTGA
CGAAGCCGTGACACACTCCTCCCCGTCACCTTATACTACTGCCGCCGCCG
CCGCCTCTCCTCCCCCGCGTTCAGCACCAGCCAGCGTTGCTGGTATTTCT
GAGGAGGATGCCGACCAGAGTGCGGCAGCCCTGTCGCCCGCCGCGCGGAC
TCCGTCTCCGCGACGACGTAGCAGCCGCGCCCAGGGAAAAGGAACGACGG
TGGCGGCGGCGGCGGCTGCAGCAAGCCCCGAGGACAGCCAGGACGCGGCG
GCCATGGGCCTGGTTGACACCCCTCCGCCGAAGAAAAAACATCTTCCAGC
GGGGACTGCTGCGTCGTCGCCGTCGTCGACGTCGTCGGAGGTCAAGAAAG
TGCGGAAAAAAACGCCACGCCGCCGTACGCTAGTAGAGAGGTTGGGCTTG
GGCGGCGGAGGCTCTCAGCCTCACGGCGGTTCTCAACCATCGCCGGAGGC
GTTCTTGTCCTCCTCGCAGGGCAGGGGGGGCTGGACTTGCGGACAGTGCA
CGCTCTTCAACCGAGGGAGAGCGAAGGCGTGCGAGGCGTGCGGGAGGGCG
AAAGCGTCCTCCCCGGCGCTTACCCGAGCGGCCACCCATGGCGGCCCGGT
GGGTCGGGTGGATGGTGCTCGGAACGCCGACAGTGGTGGTTTTGACGCTG
TTGCCAACGGCGGCAGTGGTGTTAACGGCGGCAGCAGCGGCGGCGGTGGC
GGTGGCGGTGGCGGTTCTGACGATGACGGTGGTGACAGTAGATGCCGATC
GAGCCGCGAGCCGCGTAAGATAAAAAACGGCAGGGCCGGGGACGAGGATG
TCGGCGATCGGGGACCCGGATTAGGCAAGCGGCGTCGCCAAGATGCAGGG
GACGACGAGGACATAGAAGTAGATGACGCTGGAGCAGCAGCAGAGTCGAC
TCTTGCCTACAGTCCGGACAGCGCCGATGGGAACGGTGGGGAAGGCGAGC
AGCAAGCAACTGGCCGTGCCGGCGCCGCCGCTTCAGGTACTAGGGGTGGT
AGAAAAGGGGCCGCCGCCGCCACCACCGCCGCCGCCGTGCAAGGCTTTGT
GGGAGACGATGACGCGGTTTGCTTGGAGGAAAGCGAGGAAGACGATTGGG
AGGGAGAGGGGGGCGATGGGGACGATTCGGATGACGAAGACTATTTCGAC
GCTCAAGACGGCGACAGCGGCGTCGAGGACGCCGAGGTAGTCGGCTCGCA
GATCGAGGAAGTATTTTTGCAATCTCGGGGGCGGCCTTTACAGCAGCAGC
AGCAGCAGCAGCGGAGCAGAGTTCAGAGCATGGACAGCAGCAGCAGCAGC
AACTCTGTGGCATCTTCCAAGAAGAGGCAGCGGCCCGTCCTTCCCCAGTC
TGGCCTGGTTTTGGACCTCACCGACGCGGTCAACAACGAAAGCTCCGACG
AAGACGCAGCAGCAGCGGGAGCAGCAGTTTGGGGGAAGGGTCGAGACGAC
GGACGGCGGGTGCCGGCTCCGGCGGGTGCTGCCCCCAACGATGTAGAGGA
AATCGACGACGACGACGACGACGACGACTTTGATCTCCCGGGCCTGCGTG
GGAGCGTGGCCGCTTCTGCTGGTGGTGGTTCTGGCGCTAGCGCTGCGAGA
CAAGAGCCGCCGCGCAAGTTCCGGTGCTTCGCGAGCGTCAGGGAGCATCG
GGACAGAGGCACCAGCTGCGTCGACTTCGCCTCCCTGGAGTCTGCTCCTG
CGGGAGGCCCCTCTGGAACAAAGACCTACGCGGCCCGCAAGACCGCCCGG
GATAGAAAAGGGAAATCCAAGTCGAAGCGAGGGAAGCGAAAATCCAGGGC
CGCCGCTCCCAGGGCTGCTCCCAGGGCGCCCAGGGCGACGCCGGCTTCGG
CGGGGGCAGCCGGTCATGCGAGGGGGAAGGGAGGCTCGGCCAGGGGCGGG
AGAGGTGGCGGGAGAGCCGGAAGTGGTTCTTTCAGATCGGGCGGGAGGCA
GCCGTTCGGCGGAGCGGGCGGTGCTCCGACGGCGAGTTGGATCCCTGCCG
GCGTCGCTGCTGCTGCTGCTGCTGCTGCGCGGTCCTCGTCATCGTCTTCC
GCAGGCGGAGGGAAGAGAGGCGGCGGAGGAGGAGGAGGAGCAGGAGGATC
GGGGAACCAGCCCCGACCGTTCAACCACTACCGAGGTAACGACGAGATGG
TGGATGATTCTATCGGCGGCGGGGGCTTTCACTGGGAGGGCGTCGGGCAG
ACCAGCTTCGGCGGGGACCACTGAGCGAACAACATGTTTATTTCTTTCTC
GCCTTTACAAGTCGTTTCGTTACTGCTGTTGTTTTTTTTGTTCTGTTCAG
GTGTTCTGATGGTTCCTTACGCTTTGTTTTTCCTCT
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Coding sequence (CDS) from alignment at P-littoralis_Contig19:466860..471745-

>mRNA_P-littoralis_Contig19.102.2 ID=mRNA_P-littoralis_Contig19.102.2|Name=mRNA_P-littoralis_Contig19.102.2|organism=Pylaiella littoralis U1_48|type=CDS|length=3441bp|location=Sequence derived from alignment at P-littoralis_Contig19:466860..471745- (Pylaiella littoralis U1_48)
ATGTGCGAAATCGGCGGCAGCTGTGGGATGTCTCCGGCGGGTCTCGGTGT
GGTTAGGCGGAAGGCAAGCGACAAGAGAGGTGCGAGCGACGCCGGGGGTA
GCTCGCTCGTTGGTAGTACGGAGGACGGGTGCGGCAGCGGTGGCGGTGGT
GGCAATAGTGGAGACGGAGAGGTGAAGAAAGAAGGACCTATGCCGGCGGG
TACGCTGCCGTTCGCAACGCAAGAGCGAAAGGTCAAGAATAAACGCTCCA
GGTTGAGCTTGCCTACGAAGAAGCGCGCCGGTAACGGGCGAGACGGAAGC
AAAACATCGTCAGACCCCGGAACACCCGTGGTAACTTCCCAGCAGCGGGC
GGACACAGCAGGGCTTGCCGCGAAAGAGAGTGAACAGGCTGCAGAGACGA
AGCAGGAGTCACCAAGTACTCCTCCTGCAGCAGCGGTTGACGGCGATTGC
CGTCAAGGTCTTGATACTGATGATACAGCAGCAGCGGTGGCAGCAGCGGC
AGCAGCGGTGGCAGCGTTGTCGGCAGGGAATGATTGTGAACTGCCTGGGA
AAGATGTAGGTGGTGCCGTTGATGGTGTTGCTTCTGCTGGTGGTGGTGGT
GATTCTGCGATGGACGTAGATGCCGTTGGTGGTGTCGCTTCTGCTGCTGC
TGCTGGTTCCGCGATGGACGTTGATGCTGACCCGTCCCATCCCGTGGATG
GTGGTTTGGGCACCGCTGGAGAAGCTGGGGACGATGAACACAAAGACGAA
GACACCGATATCGACGAACGCTGCGGCACGAAAAATCCAGACGAGAATCG
AGCAAAAACAGAGGGGCCCGAAGACCTCGATGGCAATGGCGGGACACTTT
CTCCGTGCGGGGGCGGTTCAGAAGAAGAGGTTGAGGAAGACGATTGCGGA
GAGTTGGTGAAGGAAGATTCTGCCAGCCTTACTGTAGGCGAAGGAGAACG
GGAAAGTGTGGAAGGCGGGAGCCAAGAGGCGGCGCCTGTCGCGACGGAGT
CATCGAACGGGGCAGTGGCCGCCTCCGGAGATGCTGGAACGGAAGCCACC
ACTGGCGGCCCCGCACAGCCGCAGTGCCGCGCATTGGCGGGGTGCCGCAT
GACGATGGACGTCGGAAGCTCGGACAGCGACAGCTCGGACGACGACGGCG
ACACGGCCCGGGGTGGGGCAGGAGAAGGAGGAGGAGGAGGAGCGGTGCAC
CTCGGCCGCGCCTTTGACGAAGCCGTGACACACTCCTCCCCGTCACCTTA
TACTACTGCCGCCGCCGCCGCCTCTCCTCCCCCGCGTTCAGCACCAGCCA
GCGTTGCTGGTATTTCTGAGGAGGATGCCGACCAGAGTGCGGCAGCCCTG
TCGCCCGCCGCGCGGACTCCGTCTCCGCGACGACGTAGCAGCCGCGCCCA
GGGAAAAGGAACGACGGTGGCGGCGGCGGCGGCTGCAGCAAGCCCCGAGG
ACAGCCAGGACGCGGCGGCCATGGGCCTGGTTGACACCCCTCCGCCGAAG
AAAAAACATCTTCCAGCGGGGACTGCTGCGTCGTCGCCGTCGTCGACGTC
GTCGGAGGTCAAGAAAGTGCGGAAAAAAACGCCACGCCGCCGTACGCTAG
TAGAGAGGTTGGGCTTGGGCGGCGGAGGCTCTCAGCCTCACGGCGGTTCT
CAACCATCGCCGGAGGCGTTCTTGTCCTCCTCGCAGGGCAGGGGGGGCTG
GACTTGCGGACAGTGCACGCTCTTCAACCGAGGGAGAGCGAAGGCGTGCG
AGGCGTGCGGGAGGGCGAAAGCGTCCTCCCCGGCGCTTACCCGAGCGGCC
ACCCATGGCGGCCCGGTGGGTCGGGTGGATGGTGCTCGGAACGCCGACAG
TGGTGGTTTTGACGCTGTTGCCAACGGCGGCAGTGGTGTTAACGGCGGCA
GCAGCGGCGGCGGTGGCGGTGGCGGTGGCGGTTCTGACGATGACGGTGGT
GACAGTAGATGCCGATCGAGCCGCGAGCCGCGTAAGATAAAAAACGGCAG
GGCCGGGGACGAGGATGTCGGCGATCGGGGACCCGGATTAGGCAAGCGGC
GTCGCCAAGATGCAGGGGACGACGAGGACATAGAAGTAGATGACGCTGGA
GCAGCAGCAGAGTCGACTCTTGCCTACAGTCCGGACAGCGCCGATGGGAA
CGGTGGGGAAGGCGAGCAGCAAGCAACTGGCCGTGCCGGCGCCGCCGCTT
CAGGTACTAGGGGTGGTAGAAAAGGGGCCGCCGCCGCCACCACCGCCGCC
GCCGTGCAAGGCTTTGTGGGAGACGATGACGCGGTTTGCTTGGAGGAAAG
CGAGGAAGACGATTGGGAGGGAGAGGGGGGCGATGGGGACGATTCGGATG
ACGAAGACTATTTCGACGCTCAAGACGGCGACAGCGGCGTCGAGGACGCC
GAGGTAGTCGGCTCGCAGATCGAGGAAGTATTTTTGCAATCTCGGGGGCG
GCCTTTACAGCAGCAGCAGCAGCAGCAGCGGAGCAGAGTTCAGAGCATGG
ACAGCAGCAGCAGCAGCAACTCTGTGGCATCTTCCAAGAAGAGGCAGCGG
CCCGTCCTTCCCCAGTCTGGCCTGGTTTTGGACCTCACCGACGCGGTCAA
CAACGAAAGCTCCGACGAAGACGCAGCAGCAGCGGGAGCAGCAGTTTGGG
GGAAGGGTCGAGACGACGGACGGCGGGTGCCGGCTCCGGCGGGTGCTGCC
CCCAACGATGTAGAGGAAATCGACGACGACGACGACGACGACGACTTTGA
TCTCCCGGGCCTGCGTGGGAGCGTGGCCGCTTCTGCTGGTGGTGGTTCTG
GCGCTAGCGCTGCGAGACAAGAGCCGCCGCGCAAGTTCCGGTGCTTCGCG
AGCGTCAGGGAGCATCGGGACAGAGGCACCAGCTGCGTCGACTTCGCCTC
CCTGGAGTCTGCTCCTGCGGGAGGCCCCTCTGGAACAAAGACCTACGCGG
CCCGCAAGACCGCCCGGGATAGAAAAGGGAAATCCAAGTCGAAGCGAGGG
AAGCGAAAATCCAGGGCCGCCGCTCCCAGGGCTGCTCCCAGGGCGCCCAG
GGCGACGCCGGCTTCGGCGGGGGCAGCCGGTCATGCGAGGGGGAAGGGAG
GCTCGGCCAGGGGCGGGAGAGGTGGCGGGAGAGCCGGAAGTGGTTCTTTC
AGATCGGGCGGGAGGCAGCCGTTCGGCGGAGCGGGCGGTGCTCCGACGGC
GAGTTGGATCCCTGCCGGCGTCGCTGCTGCTGCTGCTGCTGCTGCGCGGT
CCTCGTCATCGTCTTCCGCAGGCGGAGGGAAGAGAGGCGGCGGAGGAGGA
GGAGGAGCAGGAGGATCGGGGAACCAGCCCCGACCGTTCAACCACTACCG
AGGTAACGACGAGATGGTGGATGATTCTATCGGCGGCGGGGGCTTTCACT
GGGAGGGCGTCGGGCAGACCAGCTTCGGCGGGGACCACTGA
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