prot_P-littoralis_Contig19.93.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig19.93.1
Unique Nameprot_P-littoralis_Contig19.93.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length180
Homology
BLAST of mRNA_P-littoralis_Contig19.93.1 vs. uniprot
Match: D7FLT7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLT7_ECTSI)

HSP 1 Score: 202 bits (513), Expect = 2.240e-63
Identity = 117/182 (64.29%), Postives = 133/182 (73.08%), Query Frame = 0
Query:    8 LAALMAPRCAHSFAPV----------VGTSRKCSNRRAASMTLPGGINLNRALGTVLVSGALLTGVVGGAGVARADLSISPRCITGEGAQCDDLAEGSELIKTLQARSALSKDRYIAETLDTYNQHNFKGPAEYLRHTGYFKAEGKHMVKHKSGKYEILTNAEYANAEKAGKVKSDNFLGED 179
            LAAL+ P C  SFA +          V TS +C + R   MTLP   +LNRALG VLV GAL+TG +    VARAD+SISPRCITGEGAQC+DLAEG+ELIK+LQA+SA+SKDRY  ETLDTYN HNFK          YFKAE KHMVKH +GKYEILTNAEYA AEKAGKV++D FLGED
Sbjct:    7 LAALVGPSCVESFAVLCTAPSSSTSPVSTSLRCRSTRTM-MTLPTAGDLNRALGAVLVGGALITGAMD---VARADVSISPRCITGEGAQCEDLAEGNELIKSLQAKSAISKDRYFQETLDTYNVHNFKD---------YFKAESKHMVKHNTGKYEILTNAEYAAAEKAGKVRNDVFLGED 175          
BLAST of mRNA_P-littoralis_Contig19.93.1 vs. uniprot
Match: A0A835ZAV3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAV3_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 3.610e-10
Identity = 38/97 (39.18%), Postives = 52/97 (53.61%), Query Frame = 0
Query:   80 CITGEGAQCDDLAEGSELIKTLQARSALSKDRYIAETLDTYNQHNFKGPAEYLRHTGYFKAEGKHMVKHKSGKYEILTNAEYANAEKAGKVKSDNFL 176
            C  G G  C   AEGS+LI+ LQ RSA  +     + L+TYN+HNF           YFK   K MV+    +Y +++  EYA AEKAG V  + ++
Sbjct:   75 CEVGVGDGCAQAAEGSDLIRKLQQRSAERRAEREQQMLETYNEHNF---------ADYFKTLNKRMVRKGPNQYVLMSETEYAAAEKAGLVYDNKYI 162          
BLAST of mRNA_P-littoralis_Contig19.93.1 vs. uniprot
Match: A0A1Z5KK89_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KK89_FISSO)

HSP 1 Score: 60.8 bits (146), Expect = 1.760e-8
Identity = 41/117 (35.04%), Postives = 62/117 (52.99%), Query Frame = 0
Query:   54 LVSGALLTGVVGGAGVARADLSISPRCITGEGAQCDDLAEGSELIKTLQARSALSKDRYIAETLDTYNQHNFKGPAEYLRHTGYFKAEGKHMVKHKSGKYEILTNAEYANAEKAGKV 170
            L+  AL+   V  +  A A +S S  C  G G  C DL+EG+ELI++LQ +SA++++RY  E LD Y   N+           +F   GK +VK   G +  L ++E    ++ GKV
Sbjct:   26 LLQQALVGAFVASSSPAEAVIS-SKYCSAGVGEGCGDLSEGNELIRSLQEKSAINRERYQQEALDAYYMKNYPD---------FFGVVGKTLVKKPDGTFVALADSEVEKLKQEGKV 132          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig19.93.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FLT7_ECTSI2.240e-6364.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZAV3_9STRA3.610e-1039.18Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1Z5KK89_FISSO1.760e-835.04Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig19contigP-littoralis_Contig19:438090..442870 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig19.93.1mRNA_P-littoralis_Contig19.93.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig19 437988..443607 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig19.93.1 ID=prot_P-littoralis_Contig19.93.1|Name=mRNA_P-littoralis_Contig19.93.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=180bp
MRLIFCFLAALMAPRCAHSFAPVVGTSRKCSNRRAASMTLPGGINLNRAL
GTVLVSGALLTGVVGGAGVARADLSISPRCITGEGAQCDDLAEGSELIKT
LQARSALSKDRYIAETLDTYNQHNFKGPAEYLRHTGYFKAEGKHMVKHKS
GKYEILTNAEYANAEKAGKVKSDNFLGED*
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