prot_P-littoralis_Contig19.88.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig19.88.1
Unique Nameprot_P-littoralis_Contig19.88.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length174
Homology
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BLAST of mRNA_P-littoralis_Contig19.88.1 vs. uniprot
Match: D7FLT5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLT5_ECTSI)

HSP 1 Score: 146 bits (368), Expect = 9.890e-41
Identity = 84/178 (47.19%), Postives = 116/178 (65.17%), Query Frame = 0 
Query:    4 TANSSSQTPATATDTQADAT-----PSAPPVPXXAGGSSRGRRIFLGMAAVVVVLLGTSVHFHSQNRALEAENFTLRARVTQLENAS----TKDTGSSQIPATSCGGNQLIDTCWLKMGWGDCTENVMEDYSMKPFEDAFRVAWDSTAEVVGIVSDTVKSDLRQVCDAIHSLGRFIFE 172
            T+ +SSQTP  AT            PSAP     +GGS  GR I LG+ AVVV+LLGT+ + ++Q+RA +AE  +LR +V +LE A+    +K T S+   +T+C G+QLIDTCW K+GWGDC    +ED  +KP EDAFR A DS + V+G V++T  SD+ QVCDA+ + G ++FE
Sbjct:   59 TSETSSQTPPPATIASVSTVTHVVDPSAPLTSLLSGGSRAGR-IVLGLLAVVVMLLGTNAYSYNQSRAWKAETSSLREKVGKLEAAARTSASKPTWSTSTSSTTCPGSQLIDTCWFKVGWGDCANEALED-PVKPIEDAFRFALDSASGVIGAVTETFASDMSQVCDAVRAFGSYLFE 234
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig19.88.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FLT5_ECTSI9.890e-4147.19Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 64..84
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig19contigP-littoralis_Contig19:428436..431319 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig19.88.1mRNA_P-littoralis_Contig19.88.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig19 425921..432427 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig19.88.1 ID=prot_P-littoralis_Contig19.88.1|Name=mRNA_P-littoralis_Contig19.88.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=174bp
MQLTANSSSQTPATATDTQADATPSAPPVPPPAGGSSRGRRIFLGMAAVV
VVLLGTSVHFHSQNRALEAENFTLRARVTQLENASTKDTGSSQIPATSCG
GNQLIDTCWLKMGWGDCTENVMEDYSMKPFEDAFRVAWDSTAEVVGIVSD
TVKSDLRQVCDAIHSLGRFIFEL*
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