mRNA_P-littoralis_Contig19.66.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig19.66.2
Unique NamemRNA_P-littoralis_Contig19.66.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig19.66.2 vs. uniprot
Match: D7FLT0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLT0_ECTSI)

HSP 1 Score: 143 bits (361), Expect = 4.130e-36
Identity = 80/130 (61.54%), Postives = 99/130 (76.15%), Query Frame = 3
Query:   78 MKSYTLLLAGLVILARVSPSFGRGGWSASKPKRRS--ATMSATVSDQDKDLIKMRAYKVAAEEMGDNADEVAMLARVEEITDKLLRESFPEAYVPAPKKK-RFEDSEDIWENGTIVRYLARGMAVMLAIA 458
            MKSYTLLLA L+ +A V PS  +G        R+     M+ATVS +DK+L KMRAYK A +EMG++ADE+AML RVEEITDKLLRESFP+AY PAP K+ +  DS+D+WENGT+VRYLAR MA++LA A
Sbjct:    1 MKSYTLLLAALIAIALVCPSCAKGFGRKRTMARQGDQEPMAATVSTRDKELAKMRAYKAAVQEMGEDADELAMLKRVEEITDKLLRESFPDAYKPAPAKRPKAVDSDDVWENGTVVRYLARVMALLLAAA 130          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig19.66.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FLT0_ECTSI4.130e-3661.54Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig19contigP-littoralis_Contig19:364331..374538 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size2022
Hectar predicted targeting categorysignal peptide
Exons5
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-26_001380.1
Cds size489
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig19.66.2prot_P-littoralis_Contig19.66.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig19 365787..374461 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789909.334102-UTR-P-littoralis_Contig19:364330..3657861680789909.334102-UTR-P-littoralis_Contig19:364330..365786Pylaiella littoralis U1_48UTRP-littoralis_Contig19 364331..365786 -
1680789909.406646-UTR-P-littoralis_Contig19:374461..3745381680789909.406646-UTR-P-littoralis_Contig19:374461..374538Pylaiella littoralis U1_48UTRP-littoralis_Contig19 374462..374538 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789909.3493934-CDS-P-littoralis_Contig19:365786..3658971680789909.3493934-CDS-P-littoralis_Contig19:365786..365897Pylaiella littoralis U1_48CDSP-littoralis_Contig19 365787..365897 -
1680789909.3603983-CDS-P-littoralis_Contig19:365941..3660221680789909.3603983-CDS-P-littoralis_Contig19:365941..366022Pylaiella littoralis U1_48CDSP-littoralis_Contig19 365942..366022 -
1680789909.3737864-CDS-P-littoralis_Contig19:373031..3731391680789909.3737864-CDS-P-littoralis_Contig19:373031..373139Pylaiella littoralis U1_48CDSP-littoralis_Contig19 373032..373139 -
1680789909.386131-CDS-P-littoralis_Contig19:373491..3736061680789909.386131-CDS-P-littoralis_Contig19:373491..373606Pylaiella littoralis U1_48CDSP-littoralis_Contig19 373492..373606 -
1680789909.3964832-CDS-P-littoralis_Contig19:374387..3744611680789909.3964832-CDS-P-littoralis_Contig19:374387..374461Pylaiella littoralis U1_48CDSP-littoralis_Contig19 374388..374461 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig19.66.2

>prot_P-littoralis_Contig19.66.2 ID=prot_P-littoralis_Contig19.66.2|Name=mRNA_P-littoralis_Contig19.66.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=163bp
MKSYTLLLAGLVILARVSPSFGRGGWSASKPKRRSATMSATVSDQDKDLI
KMRAYKVAAEEMGDNADEVAMLARVEEITDKLLRESFPEAYVPAPKKKRF
EDSEDIWENGTIVRYLARGMAVMLAIAKIAIGLEEEDAMIRDAHTPIQLI
TTSNAHVPTWGD*
back to top

mRNA from alignment at P-littoralis_Contig19:364331..374538-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig19.66.2 ID=mRNA_P-littoralis_Contig19.66.2|Name=mRNA_P-littoralis_Contig19.66.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=10208bp|location=Sequence derived from alignment at P-littoralis_Contig19:364331..374538- (Pylaiella littoralis U1_48)
ACCGGCGTTCACCACAGGGCACAACCAGGCACAACACCACATACACACCG TCTCATCTCACCCAAGGAATCGCCACCATGAAGTCCTACACGCTTCTGCT GGCTGGACTTGTTATCTTGGCCCGTGTGTCTCCATCTTTTGGTCGGGGAG GGTGAGTGGCCCTGATAGCGACCGAATGTAAATATAAATACACACAAAAA TACACTGGCTTCTTTTTGAGCCTGAGAATGTCACAAACCTCTGCTGCACA CAGCAGCGCTGCTCCCGTGAGATGCAGCAGTCGCAATCAAGCTCAATTTT TCGTAGGTAGGGCGTCGCTGCAATCTCTGGCGAACAAACTCAAACTCCTT TTGGTAGCTTGGGTGAACACACAAGAGCGGCAACAACAACAACATACGAA TGGGAACAACAACAACAACCAGCACCACCAGCACCACCACCACCACCACC AACAACAACAACAACAACAACAACAACAACAACAACAACAACACTGTCGT AACGACTACACGGCTACAGCAGTACATGTGCTGCATGAACGCTGTGCCAG TTGTTTATTTGGCCCGACATCATTTGATGCGACCACTTCTACCGCAAGGT TTATGTAGACCGGTGTCCAGAACAAATGGGACGAACAGACACAATTAGAA CAATAATGAGGAACGAAACGGCTGGGTTGTACCCCCCAGCGATGTTGCGT TTCGGAACACGATTTGGTGGTCGTTTTGTGTGACGCACGGTACATCATGT ACTGAGCATGTACGGCCTATATTTATTTGTGCTGCCAGCATCGTCCGGGG CGTTAGTTATGATTGGTTGATACAGAGTGGACACAATATATCGAATTGGG CTTCTTTCAGTGAAACCATCATGATTGGTTGCCCAGGTTTAACCTTGTGT CAATAGAAAATACCGACTGCTTTTACCTGCAGATGGTCGGCGAGCAAGCC CAAAAGGAGATCAGCCACCATGTCGGCCACCGTAAGCGATCAGGACAAGG ATCTCATAAAGATGCGGGCCTACAAGGTCGCCGCCGAGGAGATGGGGGTG CGTTTATGGACTCTGTCGTGTTGGGTGCGATCGCAAAGGGAAGTAGCAGT ACTGTTATTGGTGTTGCTACTGCTGACATTGGGTTGCTGCTGTATATACT GTGTTGTTCTCGCGCTGCCGTGCTGTGGTTGACGTAGTATGGCTCCGCCA TATGGTTGTGTACAACATAGTATCATGGTATTAGTAAAGGTGTTGGTGTA AGATTGTAGACGTGGAGAGAGTACGGCATTGCTTACGAGGCGGGCCAACG AACGAAGGCGTCCCCCGTCACTGACATTGTTCTCTCCACTGAACTCCCCC CGACCCGCTCGATGCTTTGCGGTCGTGTTTGCTGCGGCTTCGCTCGTAGG ACAATGCCGACGAAGTTGCGATGCTGGCACGGGTTGAAGAAATCACGGAC AAGCTGTTGAGGGAATCGTTTCCGGAAGCTTACGTTCCCGCACCGAAGAA GAAGCGGGTGAGCCATTATACAGACACGCATACATGCCGACTTTATCAGA TGCTCTGGGATACAGTCGCCCCACAAAGGAGCGGCAAAGAACCGGAACCG TAAATAGATTTCGCCGTCGTTCTCCACGCGGATTGCTGTGATCGGCTTTG TTCCCCCCCCATATCTTTTCAGCTCAGGGAAGGTGCCGATGGCGCAAAAG GATGGGAGTGAAAATATAGCCTCGAGAGTTTTTTGAGCCGATAAAGCATC GTACGGCCTCGGCGCCCTTCCCGTTGTGCCAAGGACTGTTGTCTTTGAGA ACGGTCTCGGGGAAATATTCTAAAACTTTTCGGAGGAGGTCTTTCCATAT TTTCGTGATTCAGCTTCGGCGCCCTCCTCGCTGTGCCAGGGCCTGTTAAA CTTTGAGGAGAAACTTATCAGAAGTTTCTCAATAGCGGTATGATTCTGCT TTCATCGTTCGATTCTGGTGCTCTTCCCGTTGCCGAGAAATATGGTCTGG TACAACGGTGCATCGTATGGCACCCCTTATCTGTTGTGCAAATAGATCGC TCCTTTGTGAGCGTGTCTTGCTGGTGGCCGTCGTTGAAGCGCTCTTTGCC GCAAAAAAACACCGAAACATCATACATACTCCCCCGTCTCCGTCACTTTA CCCAGGATCGATTTCCAGAGCTCTATTTTATCACGGTACTGCAGAGCAGC GCGGTGCTCAAACCATCCCACGCTACCTGATATTTCGGGAAGCTCTTCAC GAGGTGTTGTCAACGCTATCATACCCTTTTCTAAGCTGCCGCCCCTCCTA CTTCGAACATTCCCCTTCCGATTAGGAAGGGGCTTCTATTTTGAACTTTC AAAAAGTGACCCCTTTTTTGGCACTTCAGCGCAGCATACAGTCCGATCAG ATCTCGATTGCCGCTTTCCATGCATGCCTGTGCCACGGCCTCATCTCTTT CGCCTGTACACATCCTTGGCAAATGCGGTTCCTCTGACCCTGCCCAGAGC CCGTGTTGCTCCCTGAGGGCTTTATCTCGCCTCTCGCCCTGACATGACGA TGAGCGCCGCCGCAGCAATATAATACTTTCAAATTCGTCAAACAGGGTCC ACAGCAGTCGAAATCAATCGCGATTGAGATCTATAGGGGAATCTTATTCA GCTACACATTCCCGTGTCAGCTCCGTGCTCAAGGTGAGGGAGTATCGCTG CTTTCTGCGGCTCTGCTGTCGGGGGGGAGACGTATCAGGCAAACAAATCC CACATCCCACCTTCGGAGATCTCCATGATTCAATCATTCGAAAACGAAAT CTCCATCATTCACGGAACACCCAACAGTCCCGTCAACCGTTACGTCTGTC TGACACCCACCGCACGTCTCACGAACAAGGAAGCAAAGGTTCTCCATCCT GTCTACCCCAACCATGCCCCCTAAGAGAAGTTATTCTGTCCCTCCTTCAC CACGGAGGAGACCGTTTCTTGCTCCGACTTCACCATCTCGCAAGGATGCC GCTGGGCCAGCTTCTATGGAAGATTCAGCGTTTGTTTCCACGCCCCAACC AAAACCTGCCTTGTGCTTGAAGCTGCTCGGGCTGAAAGGAGTATGACCAG ACTCCGAACCGTATCCGCCGCCGAACGTGCACGTGATGCAACGGTCGAAC GCGAACGCGTACGTGCAAGTTGGACTGCCAACGCCAGCAGACATCGACGC GTTCGCAGGTTCGTAATCGCTGCCGGCGGGACTACCGGTACTTCTGTATT GTTAACCGTCTCCAAGGCTCAAACGGTACCACCCTCAACAATACCACCAC GAGCAGTTAGTTCGTTTGGTAATCTTTGGCGTCTGGCAATCTACAGCACT ACAGCAGTAATCGTCCGCACATATAATGTTTTCACCTTCCCATGTTAGTC CCTTGCTCAAGATAATATATGAGAGGACGACGCGTTCGCAGGTTCGTAAT CTTTGCCAGCGAAAATTTTGCTCCAAGGCTCAAACAGCACCACAACCAAC ACCACCAGTAGTTTGGCAATTTTCGGCGTCTGACAATCTGCTACGTACAG CACTACCTGCAGCAGTAGTCTGGGAATCTTAAGCACTACAACAGCAGTAG TACGAACAGTAGTTCTCGCACATGGTCCGAGATCCATGCAAGAAGCCTTA GACGAGGCGTTTTTGGGTGGCTCCTGTTTTGACTTGGGAGTTCACGCCTT GGACGAGCACGAATGCTCCTGATCGGTTGTTCTTGGCCTCAGCCAGAGTT GACCATTTCGCCCCGTAAGGATCACCCCCAGCAGCGTCTGCTACCATTTC CTTGGACAAGAATACATACACCTTAGTGGCAGTCGTGTACCATGTGCAAA CTGGGAGCCACTTTGTTACGCAGTTGCGATTGCAGGGTACATGGCTCAAG TACGACTGCATGCACGGCGGCAGTGCGACAACGTCTGAGACTTTTGATGG TGACTGGACGTCGGGTTGTAAGTATTGTACGTCTATGTACGTTCGAACAA GTATTGCTGTCCCCTGACACCGTTTCCTTCGCAAAATACTATCAACATGT GGTGGCATGCGTTGCCAGATCAACGACTTTTTCCCTTGTGAATGACAGAG AGTGTACACGCAACGACTGTACGATTCCGTTGTGATCGCTGAGTACCGCC ATGTACGATTCATTGCAATTATTACGGTCAATTTGGATGATTCATGACTA CACGCGACGACGTTACGATGCCGTTTGTGAGCATGTTGATTAAATTGGTG CCATCGTTTACGTTGTCATCGTTAGGAAGGACCTTGTTATTTCGCTACTG CGATTGATTACCCAGACTACGCTCTCGTATGACTGCACCCACGGCGACGA TACGTTCACGTAGTGTATGACCGGATCCTCTATTTAACATTTGTTTATGT TTGATTTGGAACGCGCCCTGGGTCCCCCAGGGGGGCAATGCTATACGAGT ATTAGTTCTCGCACATATAGTGTTTACACCTTCCCATGTCAGCTCCCCGT GCTCGAGATATGGGAAGACCGCTGCTTTCCGCGGCTCTGCTGCCTGAGGG GAGACCTATCATGCAAACACCAACTACACTACACAGCAGTACAGCAGTGC ATCACTTTTCTCTGCCGGAATAGCATGCCACCGGCAGCGAATGGCTTTTG TATTGGCGGCCTTCCCGAACGGTTTCCTCGTGCCGCATTTGTTGAGTTCT TGGCGGCTAGGGCGGTAAGGTCAACGGCATGGTCATCGCCCTCGAGCACT TCAAGACGGGCGGTATGGATGAATCGGGGCAGCGTTCGATGCGTGGTATT TTCACCTTCTATTTTCAGGACGCTTACGTGCAGCAGCGACTACCGGCATG TGATACAGACATCGTAGGTTCTCACATGCGCACTGATTGGTGCAAAACCA CCAACGCCGGCTCAACTTCGGCGTTTGTTCGGCGCTCAACGTGACATGAT AGATGCACTGGTCACGTTTCAGCTGCACCCCGAGGATGAGTTGGCGGGCG CGCACAAGCTTGCTCGCCAGGCTCAGACTTCAGGGGGGAGCCTTGCCAAC TACTCACGGACGACGGTCCAATCAATCTCAGAGGCCATCCAAAACGCACT TATCCCCGTACTCGACCCTACCAATGCAATGGCACAGGCAAGATCTACTC CAGCCAAAGACAACCGCGAGCCTGAAGTCAGTGCTAATGTAGAGGATGAT AGCGAAGATAGTGCGGCGGCAAAGGCTGAGGCGAACGGCATGCCGTATGT GATTGAAACAGCTGCAGTCATGCCAACCGGAAGCGACTTTGCCGTTTCCA CGGTATCTAAGTCCCACCGGTACCGTAGCCTAGCCGCGAATCTTCGATCG TCAGCGGACTCCGCACCCGCAACCTCTGCCGGTATGGCTGCAGCAGAGTC CGCCGTGCGCGCTGGGCGTGTTTCCACCAAAGGTACCGACACAGCAATGG TCATACCGCCTACTGGGGAGGTTGTTGGTATCGGACTTCAACGAAATTGA CATTTTGCCTGCAGCGTATTTCCACCTTTCCCAAATGGGCTAGGAGGACA CTCACAGGAGCGGCCGAAGAAGCTCAAGCTGAAAGAATGGGCACAGATTA TTCTTCGTCGTCGCGACCCCAGCTTTCGAAAGGACAGAACCGCTCTGTTT TGCGAATGCTCCCTAGCCGTTCGGCAGGAGGCTGCAGAGCTAACGCTCGA TGGAAGCTTGCGGAGAGATTTTCGGGAGATGTCGCCGAGTCTCTCGGCAG TGGCGCCCGAAGATCTCACGGCGGTTGCCAAGGAAATGGAAGACGGCAGT TCAGCTGGTGTCGCAATGGCAAACCGCACAGCAGTGCGGGCGCTCATCAA GACCATGGCGTCTGTACACCCTGGCGAATCGTGGACGATCAACAGCAATA AGAGCGTCCATCATTGCGACTTCCTTCTTGATTCAGATGGGTCTTTTGGT TGACAGTGTAACCCGGCAGTGTCAACAGCCCCATCGTCATGAAATCGCCA CAGCACGCGTAATCGTCAAGCGTCAATCGCCCCCTCGGCATCTTCACCTG TTGTTGACTCTGTTTTTCGTTTGGGTATACGGGTGACTTAGCCTCTTGTG CAACACGTGTTTGTGAGTCCGCCGTGCAGAACATTTCGAGCATATCTTCC TCGTTCCAAATTGCGAGGCAAAGATGTTTGTACAAAAACCCCATACCGTT CTATGCGACAACTGTTTTCGTGTGAAAATGAGTCCGCCGTGTGCACAACG ATTCAGACAACGTGTGTATTCCGTTCAGATTGCGAGCACATATAGACTGC AAACGGACCGACATCCCATCAATGTCCCCTCCGTCAAAGATGTTCGTCGC AGATAACGAGGTTCCTACTATTCCGACGTGCGGAAAGTAATTCCTGGTGT CTAGTGGTTTTGTACTTCGAAATATGTTTTTTTCCCTGCCGCACAAACGT ATTTTTTAAATTAGTGAACGCATGCCTTAAGTACGACCCAAAATAACCCA CGGTTATCTGCGCATGTATCATTACATGTTCGAATGTACGCCAATAACAC AGCGGTCAGCCTCTCGTCGTGTGCAACGTTTCAAGCGTGGTGTTTGACGA TCACATTGGTTGACGTTTGATGTGGGAGTTTTTCGCGTTTGTTGCTTCTG ATATGTGTGAGATTTGTTTGACAAGAGACAACCGTATAGTTTCCTCTCAG GAAAGAACGTTACGGTTCGACTGTGTGTGACATACTCACAACAGAATAAT TGAGTAATGCACACTACTGGTAGCAGTAGTATCTACTCACGGGGATGCTG ACCGCAGTATACAAACAAACGTGTAGGACAATTGACCATTCTCCGTTAAT GGCTTCTTCAGTACACATATACGAAGTATCCAGTGTCAACGTACCAATAG TGCCTACGTTATTACATACACCATAGGTAGATTCAGAAAAGGTCGCAAGG ATCTAGAAAGAGAAGGATTCATAGAAGCTTCCAGAGCCATCTGGAGGTTC TTTATTTTGATACAAGTATGCCCTCGAACAAAAAGAGCCAGTACGGTTCG GTAATCAACACTAGTATAGTAGGAGGTACAGGAGGACACGACACCACATA TCTCAAGTAGCCAGATGATACGTTAATTCAGACCCCAACATCGACGGAGT TTATTACCTGATGAACCTCGCATCACGGTGAATGCCACCCTCGTGCAATT GCCGAATTAAAACGACTTGTTCAATCTCAAGTGCTTTTCACTCCAAGTGG TGCCAATCGCGCAGAGAAGCATGTTATTACCAGGGGAGGTACGCATCGGA TACATATTATCTCGACGGAAAATCGTGTCCGGGGGAGAGGAAGTTTGTGT TTTAGAAGTCGAAATTCCCCCGGGGGTAAAACCAAGTTTAAGGCTGTTTC TTACGGTCAGCGTTCTTTGGCCTGGCGTTTCGGACCCCCTACAGGAATCC AACCAGAGAACCCCCCTACCCTCCCACCCGCAAACAGCCCTGTTGTACAC ATCACGCGACAGCACCAACCAGAGCTTGACCCTTAGGACACAGATGCCGA TCAAACCTGATGGGGCGTGTGCTCCCATGTTCTCAAGTTGGCCGCAGGAA GTTTGGTGGCAGTGGGTTCAGGCTATGGCGAGAGTTTGGCGGCGGTATGT GTTGAAGTTGGAAAAACGGATGAAACGAAATAACAGACTTTGCTTGTGTT TCGGCCAAAAAAGGCTCGTGGACAGCGTATTTTTTTCCACCGGATTCTCC TACCTCAACCCACACCGCCGCTGAAACCTCGCCACAGTCAAAGCCCACAT CCACCAATTTTCCTGTGGCCAACCTGAATGCACTGGAGCTTACCCCCCAA CAGTTTTAGGCTCGATTGGTGTCCCAGGGGTCGAATTCTGCTTGGTATTG TCTCCTGTTGTGTTCAAGAAGTGGCCTTTCCAACCGTTTGGGCTCTCTTA TTTTTTGGGGGGGGGGGTACCTCAGGAAGAAGAACGCAAGACCAAATAAC AGAGCCGTAAGAAACGGTCTTACTTAGTGCTTTTCGGCCGGAAACAAATA TGGGGGGGGGGTGGGGGGAGAAAAGGGTTTTATCATACCGACCTCCGCAC AAACCGCTCGTCCCCTATTGCTTAAAAAAAAAAGGGAATTGGAAGGGGAC TAGCAGGAGGTTGTTTTCTCAACCACATGCCCTTACCGACAATGTCGGAA TACACCGAACATGGTTGATCGGCCGGCCTAGGTCCTTTGATTTTTCCGAC ACCGAAGACGTGGTTGGCGCGATCGTGTACCGCAGGTGTTTTCCCACGCA CCGAAAGATGCAGAGCGAGAGGAGCAGCGCGATAGGGTGACGTTTGATAA ACTTCTCGGGTTCATATCCATGATGGCTGCATTTTGTGACGTTCAACAAA CGTCGCGTACTCCAGGATGGCTTGCGTTTTTTCTTCCTTACTTTGACGTT GGTGCTTTGCTCTCCTGCTGCTGTTTGCTCGACCCGCATTCCTCCCCCTC GTCCTCAAAAATGAAGTTCGAGGACAGCGAGGACATTTGGGAGAACGGGA CGATCGTGCGCTACCTAGCCCGCGGCATGGCTGTCATGCTAGCCATAGCG GGACTGTACGCGTTGAAAGATAGCCAGACGCCCAGATCAAGGCCAAGATC GCTATCGGACTCGAGGAAGAAGACGCGATGATACGAGACGCTCATACCCC AATTCAGTTGATCACCACTAGCAATGCACACGTTCCAACTTGGGGGGACT AAACAAGTAGCGGGCCGCAATCCCTCGCGTTCGCCGCCTATCAGAGGGAC TTGAGCTCGGTGTCCATTTTTTCTGCAGCAGGGAGGGCTTGAAAACGGAA AGTCGTGTGGGAGCGAGCAGGGGTATGCAGCCGGTTTTCCCCACAATGGA GAGGGCAGATGTGCCCAGAGTAACACGTCTTTGAGAGGTCTCCGCGGAAA AAAGTTTCACAAGACGTAAAAGTTTTAATGATGTTTCATCTCTTCGCGTT GCGGAGGAAAAAACGGCTGTAAACTCGCGCCCGCCACCGCTCGCGGGGAA AGCTTGAGAGGTTGTACTCCCGTAGTCCACAAAGAAGAAATGAGGGCACC GGTGTTTTCGTGTATTTTTTCGTGGCGTTACTGGTGTACTACTGTAGAAG CACAAACCACTCTGCGGCAGTGGGGAAGATGTGCGTAGAAATCAGCGGCG TCGGGGCTCACCACGGAAGGGAAACTGCGGGCACGTCATGGCTCTCTGTC TCTCTATGTTAACTAGCCTTGTATCTTGTATCGCAAAAGGGGTGTTGTTT AGAATTTTCGACCGCGAGACCGGTCCACGGAAAAGCGTTTTCCGCTGACT GCTGTGCCTCATCATCGGGGACGTCATCATCGGGGAGGCTGTTACCGGTC ATGTGGTCGAACATTTATGTCAGGGAAATGTGCGCCTCATCGTTCGGGGT ATGGAGCCCTCCGGTTTGTAGACTACTTTTTCTTGGGAAGCTTCGAATAC CAAACTATTTAGGCCCGTCGAATAGGATGTTGAGCAATGCAATGTACTGC TGTAGAAGAGTAGTGAACGAACTGGGACAACTACAACCCGTAAGAAAGGA GTAAAAAGGAAGACAGGCAGGAAGGTGTGCGAGGCAAGTTGAGTCGGGTG TGCAGTTCTGAGCCGTGGGTGTTTATTTAGGAGCGGACAAGGCCAGCGAT GTTTCCCACGGTTTTAATTTGGTATGAGAGTTGAGATTTGTGGGAGTGAG AGCTTTTAGGAGGTCGGTTGGGGCTCCTACAGGCGTTTTTGTTTTCTACC CCGGTGTTTTATTTCACGCCTCCTTTTTTTTTTTTCAATTGCGTTTGCCC GTGTGCGCTTCTGGATATCACGGCAGCTACAGTATGAACAGTATTTATGA TGTGAATTAGTTCAAGGGCCGCAAGGGCGGAGAAATGCCCGCCCGTCAGA TCAAGTCCATCAACACTCCGCGAAGGATGTATGATGAGACGAGAGGGATC TAGCGAACTAGATACCACGAAGTCGGCTGATATTCCATGAGTCTGCCCGC GGCCTTGACTCGTCTCTATTGCCCGCATTTCCAAGTCCTGCCTGCATTCG AAATTATTGCACCGGTGTTCGGCTGGAAGAATAGGTTACAGCTCGAGAGG GAAGACTACAGCAAATTCTCCTCCATATTTCCAACAATGCGGGCCCGTTT CATGACAA
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig19:364331..374538-

>mRNA_P-littoralis_Contig19.66.2 ID=mRNA_P-littoralis_Contig19.66.2|Name=mRNA_P-littoralis_Contig19.66.2|organism=Pylaiella littoralis U1_48|type=CDS|length=489bp|location=Sequence derived from alignment at P-littoralis_Contig19:364331..374538- (Pylaiella littoralis U1_48)
ATGAAGTCCTACACGCTTCTGCTGGCTGGACTTGTTATCTTGGCCCGTGT
GTCTCCATCTTTTGGTCGGGGAGGATGGTCGGCGAGCAAGCCCAAAAGGA
GATCAGCCACCATGTCGGCCACCGTAAGCGATCAGGACAAGGATCTCATA
AAGATGCGGGCCTACAAGGTCGCCGCCGAGGAGATGGGGGACAATGCCGA
CGAAGTTGCGATGCTGGCACGGGTTGAAGAAATCACGGACAAGCTGTTGA
GGGAATCGTTTCCGGAAGCTTACGTTCCCGCACCGAAGAAGAAGCGGTTC
GAGGACAGCGAGGACATTTGGGAGAACGGGACGATCGTGCGCTACCTAGC
CCGCGGCATGGCTGTCATGCTAGCCATAGCCAAGATCGCTATCGGACTCG
AGGAAGAAGACGCGATGATACGAGACGCTCATACCCCAATTCAGTTGATC
ACCACTAGCAATGCACACGTTCCAACTTGGGGGGACTAA
back to top