mRNA_P-littoralis_Contig19.35.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig19.35.3 vs. uniprot
Match: D7G6Q7_ECTSI (PYlqF, plastid YlqF/RbgA-like GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6Q7_ECTSI) HSP 1 Score: 673 bits (1737), Expect = 1.760e-235 Identity = 361/482 (74.90%), Postives = 380/482 (78.84%), Query Frame = 1
Query: 478 GASSAIVMGAGSWKDSEEGPAIDPFNEEKMDAQGQHVINWYPGHIAKAERQLLDYLKMVDVVVEVRDCRIPAATTHQMVPTWVGNRRVVQAGHSLAPRASGPPPLRHARSSQHLHDFRLGKNMSTILHPTGSPNTPPPPPNPKRHPRCPLLGSHFSIGRPLVVVLNRVDTASSVAVAQWKKYLVNDGGLRADNRAGNVPVFFVDSKRGRGVHEIKKAALKAGSRVNERRVRRGMNPRSVRVAVIGFPNVGKSALINRLIGKKVAKSMNMPGVTKKMNWVRLGGKDTKPEQNLELLDSPGIIPARQEDQNQALKLAICNDIGQASYDTQVVAAKMIDQLVETAVQFPGYVSLDAIATRYGIDPRRHTGEEYLHLVAQKMYFGEKNSAADKLLGDFRKGYLGALSLEAPPRANASHNRLPLKPSAVLGGASGAGAGTARDAAARPMGGG-ARKAGDGGGEVEVEFGAAAKEAREFVGNGDFEGW 1920
G S VM AG W+D E+GPAIDPF+E KM+AQGQHVINWYPGHIAKAERQL DYL MVDVVVEVRDCRIPAATTHQ+VP+WVG R PL+VVLNRVDTAS AV QWKKYLV +GGLRADNR GNVPVFFVDSKRGRGVHEIKKAALKAGSRVN+RRVRRGMNPRSVRVAVIGFPNVGKSALINRLIGKKVAKSMN PGVTKKMNWVRLGGKDTKPEQNLELLDSPGIIPARQEDQNQALKLAICNDIGQASYDTQVVAAKMIDQLVETAVQFPGYVSLDA+ATRYGIDPRRH+GEEYLHLVAQKMYFGEKNSAADKLLGDFRKG+LG+LSLEAPPRANA+HNRLPLKP GGASGAGAGT+RDAA RPMGGG R+ G G + EVEFGAAAKEAREFVG+G+FEGW
Sbjct: 135 GGLSTAVMAAG-WRDKEDGPAIDPFDEGKMNAQGQHVINWYPGHIAKAERQLQDYLNMVDVVVEVRDCRIPAATTHQLVPSWVGKR-------------------------------------------------------------------------PLIVVLNRVDTASPTAVEQWKKYLVAEGGLRADNRGGNVPVFFVDSKRGRGVHEIKKAALKAGSRVNDRRVRRGMNPRSVRVAVIGFPNVGKSALINRLIGKKVAKSMNKPGVTKKMNWVRLGGKDTKPEQNLELLDSPGIIPARQEDQNQALKLAICNDIGQASYDTQVVAAKMIDQLVETAVQFPGYVSLDAVATRYGIDPRRHSGEEYLHLVAQKMYFGEKNSAADKLLGDFRKGHLGSLSLEAPPRANAAHNRLPLKPGLEAGGASGAGAGTSRDAAGRPMGGGNMREPGGGVEDEEVEFGAAAKEAREFVGSGEFEGW 542
BLAST of mRNA_P-littoralis_Contig19.35.3 vs. uniprot
Match: A0A835ZND5_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZND5_9STRA) HSP 1 Score: 411 bits (1056), Expect = 4.060e-134 Identity = 232/445 (52.13%), Postives = 283/445 (63.60%), Query Frame = 1
Query: 586 VINWYPGHIAKAERQLLDYLKMVDVVVEVRDCRIPAATTHQMVPTWVGNRRVVQAGHSLAPRASGPPPLRHARSSQHLHDFRLGKNMSTILHPTGSPNTPPPPPNPKRHPRCPLLGSHFSIGRPLVVVLNRVDTASSVAVAQWKKYLVNDGGLRADNRAGNVPVFFVDSKRGRGVHEIKKAALKAGSRVNERRVRRGMNPRSVRVAVIGFPNVGKSALINRLIGKKVAKSMNMPGVTKKMNWVRLGGKDTKPEQNLELLDSPGIIPARQEDQNQALKLAICNDIGQASYDTQVVAAKMIDQLVETAVQFPGYVSLDAIATRYGIDPRRHTGEEYLHLVAQKMYFGEKNSAADKLLGDFRKGYLGALSLEAPPRANASHNRLPLKPSAVLGGASGAGAGTARDAAARPMGGGARKAGDGGGEVEVEFGAAAKEAREFVGNGDFEGW 1920
+INWYPGHIAKAER L +YLK+VDVVVEVRD RIP +TTH +VP WVG GRPLVVV+ R D A + A+ WK+Y + G+ R NVPVFFVDSKRG+ V +KKA LKAG+ VNE+RV RG+NPRSVRVAVIG+PNVGKSALIN+L+GK VAKS N+PGVTKK+NW+RLGG+D + +Q LELLDSPGIIPA+QEDQ ALKLAICNDIGQASYD Q V+A M+D LVETA+QFPGYV L AI RY +DPRR TGEE+LH VA ++Y G+ N+AAD+LLGDFR+G+ GA++LEAPP + + N L LK A GA G G +A A P A++A + + A ++ RE++G GDFEGW
Sbjct: 85 LINWYPGHIAKAERTLEEYLKLVDVVVEVRDARIPISTTHPLVPRWVG-------------------------------------------------------------------------GRPLVVVMARSDVAPAKAIDDWKRYYTQEKGMAQTGRRSNVPVFFVDSKRGKHVFLVKKAVLKAGAHVNEKRVSRGINPRSVRVAVIGYPNVGKSALINQLVGKAVAKSRNLPGVTKKINWIRLGGQDNRIDQELELLDSPGIIPAKQEDQESALKLAICNDIGQASYDPQRVSAAMVDCLVETAIQFPGYVDLKAITRRYDLDPRRCTGEEFLHAVAARLYHGQVNAAADRLLGDFRRGFFGAIALEAPPSLDET-NSLRLKTKAA--GARGDGDDSAMWQPAEPQ---AQQA-----DAIAQATRAIQDQREYIGAGDFEGW 445
BLAST of mRNA_P-littoralis_Contig19.35.3 vs. uniprot
Match: A0A4D9DA39_9STRA (G domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DA39_9STRA) HSP 1 Score: 332 bits (851), Expect = 5.920e-103 Identity = 189/408 (46.32%), Postives = 237/408 (58.09%), Query Frame = 1
Query: 496 VMGAGSWKDSEEGPAIDPFNEEKMDAQ-GQHVINWYPGHIAKAERQLLDYLKMVDVVVEVRDCRIPAATTHQMVPTWVGNRRVVQAGHSLAPRASGPPPLRHARSSQHLHDFRLGKNMSTILHPTGSPNTPPPPPNPKRHPRCPLLGSHFSIGRPLVVVLNRVDTASSVAVAQWKKYLVNDGGLRADNRAGN--VPVFFVDSKRGRGVHEIKKAALKAGSRVNERRVRRGMNPRSVRVAVIGFPNVGKSALINRLIGKKVAKSMNMPGVTKKMNWVRLGGK---DTKPEQNLELLDSPGIIPARQEDQNQALKLAICNDIGQASYDTQVVAAKMIDQLVETAVQFPGYVSLDAIATRYGIDPRRHTGEEYLHLVAQKMYFGEKNSAADKLLGDFRKGYLGALSLEAPP 1701
MGAG K E F ++ D +HVINWYPGHIAKAER+L D+LK+VDVVVE RD RIP ATTH +V WVG R PL+V + R D A S A+ +W + V RA +R G VPV FVDS++G +H +K ALKAG+ VNERR R G+ PRS+RVAVIG+PNVGKSA+IN+LIG+++AKS NMPGVTK+++WVRLG ++ E+ LELLDSPGIIPA+Q DQ A KLA+CNDIGQASYD QVVA ++I+ L + PGYV L + RY +DP +GEEYLH +A K+Y G SAAD+L+ DFRKG+ G ++LE PP
Sbjct: 67 AMGAGGRKSGEVQEPDFGFRPDEEDVSVSRHVINWYPGHIAKAERELQDFLKLVDVVVEARDARIPTATTHPLVRQWVGRR-------------------------------------------------------------------------PLIVAMTRKDMAPSAAIKEWSDFYVQSA--RAAHRIGQPRVPVVFVDSRQGTDIHRLKMIALKAGAAVNERRARLGLLPRSIRVAVIGYPNVGKSAIINKLIGRRLAKSKNMPGVTKRISWVRLGAAAMGSSRKEEELELLDSPGIIPAKQVDQATAFKLAVCNDIGQASYDVQVVAGELINMLRRVHARRPGYVDLSRLEQRYQLDPCTLSGEEYLHALAAKLYRGNLYSAADRLMSDFRKGHFGPVTLEIPP 399
BLAST of mRNA_P-littoralis_Contig19.35.3 vs. uniprot
Match: A0A7S4D8U7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8U7_HETAK) HSP 1 Score: 321 bits (822), Expect = 8.660e-100 Identity = 187/407 (45.95%), Postives = 237/407 (58.23%), Query Frame = 1
Query: 511 SWKDSEEGPAIDPFNEEKMDAQGQHVINWYPGHIAKAERQLLDYLKMVDVVVEVRDCRIPAATTHQMVPTWVGNRRVVQAGHSLAPRASGPPPLRHARSSQHLHDFRLGKNMSTILHPTGSPNTPPPPPNPKRHPRCPLLGSHFSIGRPLVVVLNRVDTASSVAVAQWKKYLVNDGGLRADNRAGNVPVFFVDSKRGRGVHEIKKAALKAGSRVNERRVRRGMNPRSVRVAVIGFPNVGKSALINRLIGKKVAKSMNMPGVTKKMNWVRLG-------GKDTKPEQNLELLDSPGIIPARQEDQNQALKLAICNDIGQASYDTQVVAAKMIDQLVETAVQFPGYVSLDAIATRYGIDPRRHTGEEYLHLVAQKMYFGEKNSAADKLLGDFRKGYLGALSLEAPPRAN 1710
S D+ + + N E+ + +INWYPGHIAKAE QL +YLK+VDVVVE RD RI +TTH V W+G R P +VV+NR D S A+ WKK+L+ G + PVFFV+SKRG G+H +K+A LKAG+ VNERRVRRG+ PR++R A+IG+PNVGKSALINRLIG+ VA+S N+PGVT+ +NW R+G G+ K + LELLDSPGIIPA+Q DQ+ A++LAICNDIGQASYDTQVV+ MID + ET Q+P ++ + RYGI+ HTGE +L+ VAQK+Y G SA D+LLGDFRKGYLG L LEAPP A+
Sbjct: 32 SMTDNIDADTVQELNLERR----KTLINWYPGHIAKAESQLKEYLKLVDVVVECRDARILESTTHPSVADWIGKR-------------------------------------------------------------------------PHIVVVNREDAIPSGAIDLWKKHLLYTSGRSGKKK----PVFFVNSKRGTGIHTVKRAILKAGAFVNERRVRRGIQPRAIRTAIIGYPNVGKSALINRLIGRAVARSKNIPGVTRTLNWHRIGRHQGQAQGQGAKSSE-LELLDSPGIIPAKQVDQSTAVRLAICNDIGQASYDTQVVSGLMIDIIKETYQQYPEICPVEKLQERYGINIFDHTGEGFLYEVAQKLYKGSTQSAGDRLLGDFRKGYLGNLCLEAPPAAS 356
BLAST of mRNA_P-littoralis_Contig19.35.3 vs. uniprot
Match: A0A482SIN3_9ARCH (Ribosome biogenesis GTPase YlqF n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SIN3_9ARCH) HSP 1 Score: 303 bits (775), Expect = 2.860e-93 Identity = 175/375 (46.67%), Postives = 215/375 (57.33%), Query Frame = 1
Query: 577 GQHVINWYPGHIAKAERQLLDYLKMVDVVVEVRDCRIPAATTHQMVPTWVGNRRVVQAGHSLAPRASGPPPLRHARSSQHLHDFRLGKNMSTILHPTGSPNTPPPPPNPKRHPRCPLLGSHFSIGRPLVVVLNRVDTASSVAVAQWKKYLVNDGGLRADNRAGNVPVFFVDSKRGRGVHEIKKAALKAGSRVNERRVRRGMNPRSVRVAVIGFPNVGKSALINRLIGKKVAKSMNMPGVTKKMNWVRLGGKDTKPEQNLELLDSPGIIPARQEDQNQALKLAICNDIGQASYDTQVVAAKMIDQLVETAVQFPGYVSLDAIATRYGIDPRRHTGEEYLHLVAQKMYFGEKNSAADKLLGDFRKGYLGALSLEAPP 1701
G+++I+WYPGHIAKAER+L +YLK VDVV+EV D RIP ATTH +VP WVG++ PL+V + R+D S+ A+ +WKKY + ++F++ K G GV +K+ ALKAG VNERR+RRG+ PR+VR AVIGFPNVGKSALINRL+GKK+AKS N+PGVT+ + WVR+GG LELLDSPGIIPARQ DQ+ ALKLAICNDIG+ASYD VVAA M DQ+ P YV + I RY I R TGEE ++ A++ Y G SAADKLLGDFRK L SLEAPP
Sbjct: 10 GRNLISWYPGHIAKAERELAEYLKKVDVVIEVIDARIPFATTHPIVPQWVGSK-------------------------------------------------------------------------PLIVAVARLDQVSTAALKEWKKYYTQ---YPVHPERPDAKIYFINGKLGAGVLSLKRQALKAGEAVNERRMRRGIQPRAVRAAVIGFPNVGKSALINRLLGKKMAKSRNLPGVTRALQWVRVGGLQGPQGHVLELLDSPGIIPARQFDQDSALKLAICNDIGEASYDRVVVAAAMCDQVNSLFRHRPSYVHMQHIEERYKIPFRSMTGEEIVYQFAEERYKGNSISAADKLLGDFRKDMLKYASLEAPP 308
BLAST of mRNA_P-littoralis_Contig19.35.3 vs. uniprot
Match: A0A7S2V344_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V344_9STRA) HSP 1 Score: 306 bits (783), Expect = 2.980e-93 Identity = 177/391 (45.27%), Postives = 227/391 (58.06%), Query Frame = 1
Query: 586 VINWYPGHIAKAERQLLDYLKMVDVVVEVRDCRIPAATTHQMVPTWVGNRRVVQAGHSLAPRASGPPPLRHARSSQHLHDFRLGKNMSTILHPTGSPNTPPPPPNPKRHPRCPLLGSHFSIGRPLVVVLNRVDTASSVAVAQWKKYLVNDGGLRADNRAG-NVPVFFVDSKRGRGVHEIKKAALKAGSRVNERRVRRGMNPRSVRVAVIGFPNVGKSALINRLIGKKVAKSMNMPGVTKKMNWVRLGGKDTK-------------------PEQNLELLDSPGIIPARQEDQNQALKLAICNDIGQASYDTQVVAAKMIDQLVETAVQFPGYVSLDAIATRYGIDPRRHTGEEYLHLVAQKMYFGEKNSAADKLLGDFRKGYLGALSLEAP 1698
+INWYPGHIAKAE L +YLKMVDVV+EVRD RI +TTH MV WVGNR PL+V +NR+D + W+++L N R++ G V FFV+SKRG G+HE+K+AALKAG+ VNERR RRG+ PR+VR AVIG+PNVGKSALINRL+G+ VAKSMN PGVT+ + WVR+G + ++ PE LELLDSPGIIPA+Q Q+ A +LAICNDIGQASYDTQVVAA+M+D + E + P + ++ RYGIDP TGEEY++ +A+ ++ G +AAD+LL DFRKG+LG ++LE P
Sbjct: 107 MINWYPGHIAKAEHNLKEYLKMVDVVIEVRDARILQSTTHPMVKEWVGNR-------------------------------------------------------------------------PLLVCVNRMDCVGVDTLNVWRRHL-NAEAARSEAEGGAKVSYFFVNSKRGGGIHEVKRAALKAGAFVNERRARRGIRPRAVRAAVIGYPNVGKSALINRLVGRAVAKSMNTPGVTRVLTWVRIGRRHSEKVGQASARGGSGGHVQGSLPE--LELLDSPGIIPAKQVSQDCATRLAICNDIGQASYDTQVVAARMVDLITEAHREHPIHAPVNEFQKRYGIDPLPVTGEEYVYELAESLFHGSAQNAADRLLSDFRKGFLGNIALEIP 421
BLAST of mRNA_P-littoralis_Contig19.35.3 vs. uniprot
Match: A0A7S2RRC8_9STRA (Hypothetical protein n=3 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RRC8_9STRA) HSP 1 Score: 288 bits (738), Expect = 3.940e-87 Identity = 172/406 (42.36%), Postives = 225/406 (55.42%), Query Frame = 1
Query: 538 AIDP-FNEEKMDA-QGQHVINWYPGHIAKAERQLLDYLKMVDVVVEVRDCRIPAATTHQMVPTWVGNRRVVQAGHSLAPRASGPPPLRHARSSQHLHDFRLGKNMSTILHPTGSPNTPPPPPNPKRHPRCPLLGSHFSIGRPLVVVLNRVDTASSVAVAQWKKYLVNDGGLRADNRAGNVPVFFVDSKRGRGVHEIKKAALKAGSRVNERRVRRGMNPRSVRVAVIGFPNVGKSALINRLIGKKVAKSMNMPGVTKKMNWVRLGGKDTKPEQNLELLDSPGIIPARQEDQNQALKLAICNDIGQASYDTQVVAAKMIDQLVETAVQFPGYVSLDAIATRYGIDPRRH-----------------TGEEYLHLVAQKMYFGEKNSAADKLLGDFRKGYLGALSLEAP 1698
A++P ++E +M + + VI WYPGH+AKAE+QL+D L+ VDVVVE+RD RIP AT H +V WVGN +P +VV R D AVA+W +YL + P+F+VD KRG GV E+K+A L AG VN+RR RG+ PR VR AVIGFPNVGKSALIN+L+GKK A S N PGVT+ + W+R+GG +++ +ELLDSPGIIPA+Q DQN ALKLAICNDIG+ASYD++ VAA M++ L T + +VS+D +A RYG+DPR TGE++L L+A K + G+ AA ++L DFRKG LG LSL+ P
Sbjct: 43 AVEPGWDEAEMGGVESKAVIQWYPGHVAKAEKQLVDCLQRVDVVVELRDARIPEATAHPLVDGWVGN------------------------------------------------------------------------AKPRIVVFARKDMVPGSAVAEWHRYLTSKPDYNG------APIFWVDGKRGAGVRELKRAVLSAGEYVNKRRENRGIRPRPVRAAVIGFPNVGKSALINQLVGKKRAVSENRPGVTRSLQWIRIGGDNSQ----IELLDSPGIIPAKQVDQNCALKLAICNDIGEASYDSERVAASMVELLRATHSRRSSFVSVDVLADRYGVDPRLAPAPNPLEAIPRPPTGPMTGEDFLALMADKHHQGDMFVAAQRILADFRKGLLGKLSLDVP 366
BLAST of mRNA_P-littoralis_Contig19.35.3 vs. uniprot
Match: A0A0G4ERF4_VITBC (G domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ERF4_VITBC) HSP 1 Score: 279 bits (713), Expect = 1.560e-82 Identity = 161/391 (41.18%), Postives = 218/391 (55.75%), Query Frame = 1
Query: 589 INWYPGHIAKAERQLLDYLKMVDVVVEVRDCRIPAATTHQMVPTWVGNRRVVQAGHSLAPRASGPPPLRHARSSQHLHDFRLGKNMSTILHPTGSPNTPPPPPNPKRHPRCPLLGSHFSIGRPLVVVLNRVDTASSVAVAQWKKYL----VNDGGLRADNRAGN------VPVFFVDSKRG-RGVHEIKKAALKAGSRVNERRVRRGMNPRSVRVAVIGFPNVGKSALINRLIGKKVAKSMNMPGVTKKMNWVRLGGKDTKP--EQNLELLDSPGIIPARQEDQNQALKLAICNDIGQASYDTQVVAAKMIDQLVETAVQFPGYVSLDAIATRYGIDPR-------RHTGEEYLHLVAQKMYFGEKNSAADKLLGDFRKGYLGALSLEAPP 1701
INWYPGHIAKA+RQLL+Y+++VDVV+EVRD RIP AT H MVP WVGNR P ++VLNR D + A+ W++YL D + G VPV V+++ G RG+ I+KA +K G VN +R R+G+ PR+VR VIG+PNVGKSALINRLIG+K KS NMPGVT++++WVRL ++T E+ +ELLD+PGIIPA QEDQ+ A +LA+CNDI QA+YD ++D+L++ + P YV ++ + RYG+DP TGE Y++ +A K + G+ NSAA +LL DF+KG LG ++LE PP
Sbjct: 116 INWYPGHIAKAQRQLLEYIRLVDVVIEVRDARIPLATGHPMVPLWVGNR-------------------------------------------------------------------------PRIIVLNRCDLVAKEALQDWERYLKVSAARDSRIHNSTNGGGASPLPAVPVVPVNAREGGRGIPRIQKALVKVGEAVNAKRERKGLRPRAVRALVIGYPNVGKSALINRLIGRKKTKSYNMPGVTRQISWVRLRDRETTGPVEKQVELLDTPGIIPANQEDQSAAWRLAMCNDISQAAYDVHEAGVALVDELLQAWKRRPSYVPVENLRRRYGVDPHYWGTDSANATGEFYMNQLAFKCFSGDINSAAGRLLSDFQKGRLGKVTLEIPP 433
BLAST of mRNA_P-littoralis_Contig19.35.3 vs. uniprot
Match: A0A2V3IVH6_9FLOR (Mitochondrial GTPase 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVH6_9FLOR) HSP 1 Score: 273 bits (698), Expect = 2.060e-82 Identity = 154/371 (41.51%), Postives = 203/371 (54.72%), Query Frame = 1
Query: 586 VINWYPGHIAKAERQLLDYLKMVDVVVEVRDCRIPAATTHQMVPTWVGNRRVVQAGHSLAPRASGPPPLRHARSSQHLHDFRLGKNMSTILHPTGSPNTPPPPPNPKRHPRCPLLGSHFSIGRPLVVVLNRVDTASSVAVAQWKKYLVNDGGLRADNRAGNVPVFFVDSKRGRGVHEIKKAALKAGSRVNERRVRRGMNPRSVRVAVIGFPNVGKSALINRLIGKKVAKSMNMPGVTKKMNWVRLGGKDTKPEQNLELLDSPGIIPARQEDQNQALKLAICNDIGQASYDTQVVAAKMIDQLVETAVQFPGYVSLDAIATRYGIDPRRHTGEEYLHLVAQKMYFGEKNSAADKLLGDFRKGYLGALSLEAP 1698
VI WYPGHIAKAER L + +K VDVV+EVRDCR+P AT H VP W+GN+ V A +NR D A A + W+++L+ G V F+++K+GRGV E+KK A++A S VNE+R RG+ PR+VR VIG+PNVGKSALINRL+G+K AKS N PGVT+ WVR+ +ELLD PGIIPA+ Q+ AL+LAIC+DIGQA+YDTQ+ AA MID+L A +PGY D + R+ IDPR +GEE+L+ A+ +Y + A +LL +FR G LG ++LE+P
Sbjct: 43 VIQWYPGHIAKAERALKESIKAVDVVIEVRDCRVPLATAHPEVPNWIGNKNRVLA-------------------------------------------------------------------------MNRADLAPEAARSDWRRHLLGQG----------EKVRFINAKQGRGVRELKKLAMEASSAVNEKRKARGLLPRAVRCLVIGYPNVGKSALINRLVGRKSAKSANKPGVTRNFQWVRISS-------TIELLDMPGIIPAKFVSQDTALRLAICDDIGQAAYDTQLTAALMIDELKHVASTYPGYFCFDTLVERFRIDPREMSGEEFLYCAAKSLYKDDAERTAVRLLTEFRSGVLGPVALESP 323
BLAST of mRNA_P-littoralis_Contig19.35.3 vs. uniprot
Match: A0A7R9U7N3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7N3_9STRA) HSP 1 Score: 274 bits (700), Expect = 2.590e-81 Identity = 157/379 (41.42%), Postives = 217/379 (57.26%), Query Frame = 1
Query: 589 INWYPGHIAKAERQLLDYLKMVDVVVEVRDCRIPAATTHQMVPTWVGNRRVVQAGHSLAPRASGPPPLRHARSSQHLHDFRLGKNMSTILHPTGSPNTPPPPPNPKRHPRCPLLGSHFSIGRPLVVVLNRVDTASSVAVAQWKKYLVNDGGLRADNRAGNVPVFFVDSKRGRGVHEIKKAALKAGSRVNERRVRRGMNPRSVRVAVIGFPNVGKSALINRLIGKKVAKSMNMPGVTKKMNWVRLG-GKDTKPEQNLELLDSPGIIPARQEDQNQALKLAICNDIGQASYDTQVVAAKMIDQLVETAVQFPG-YVSLDAIATRY-GIDP-----RRHTGEEYLHLVAQKMYFGEKNSAADKLLGDFRKGYLGALSLEAPP 1701
I WYPGHIAKAERQL +Y+K VD+V+EVRD RIP +TTH MV TW+G++ P +VV NR D A +VAV W+K+ V+ + P+F ++K GVHEIKKA L+ G+ VNE+R ++G+ PR++R+AVIGFPNVGKSALINRL+G+K+A+S + PGVT+++ W+RLG G+D ++ELLDSPGIIPA+Q DQ A LA+CNDIG ASY+++ VA+ +I+++V+ A G YV ++ + R G DP T EEYLH +A + + G+ AA++L+ DFRKG G +LE PP
Sbjct: 88 IQWYPGHIAKAERQLAEYMKCVDIVIEVRDARIPFSTTHPMVSTWIGSK-------------------------------------------------------------------------PHIVVFNRKDCAPAVAVTHWRKHFVDLAKQSESEGSPGKPIFAFNAKAQEGVHEIKKACLQLGAHVNEKREKKGLLPRAIRIAVIGFPNVGKSALINRLLGRKMARSADTPGVTRQLTWIRLGKGRDGA---DIELLDSPGIIPAKQVDQRAAEALAMCNDIGVASYESEHVASALIERIVDVAKASDGTYVDVEQVVRRCDGFDPFLFVEEGGTAEEYLHKLADRRHRGDLYGAANRLMNDFRKGMFGPATLEVPP 390 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig19.35.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig19.35.3 >prot_P-littoralis_Contig19.35.3 ID=prot_P-littoralis_Contig19.35.3|Name=mRNA_P-littoralis_Contig19.35.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=637bp MTVQVYLPWIQTVTIAMVARMTNSIASVDEGISRRRHTSVQTSVTSRTQGback to top mRNA from alignment at P-littoralis_Contig19:263139..268831+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig19.35.3 ID=mRNA_P-littoralis_Contig19.35.3|Name=mRNA_P-littoralis_Contig19.35.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=5693bp|location=Sequence derived from alignment at P-littoralis_Contig19:263139..268831+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig19:263139..268831+ >mRNA_P-littoralis_Contig19.35.3 ID=mRNA_P-littoralis_Contig19.35.3|Name=mRNA_P-littoralis_Contig19.35.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1911bp|location=Sequence derived from alignment at P-littoralis_Contig19:263139..268831+ (Pylaiella littoralis U1_48)back to top |