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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 743 |
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Cds size | 741 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789905.4607651-CDS-P-littoralis_Contig19:898789..898919 | 1680789905.4607651-CDS-P-littoralis_Contig19:898789..898919 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig19 898790..898919 + |
| 1680789905.4732277-CDS-P-littoralis_Contig19:899089..899199 | 1680789905.4732277-CDS-P-littoralis_Contig19:899089..899199 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig19 899090..899199 + |
| 1680789905.48387-CDS-P-littoralis_Contig19:905733..906149 | 1680789905.48387-CDS-P-littoralis_Contig19:905733..906149 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig19 905734..906149 + |
| 1680789905.4925294-CDS-P-littoralis_Contig19:906611..906696 | 1680789905.4925294-CDS-P-littoralis_Contig19:906611..906696 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig19 906612..906696 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig19.199.1 >prot_P-littoralis_Contig19.199.1 ID=prot_P-littoralis_Contig19.199.1|Name=mRNA_P-littoralis_Contig19.199.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=247bp
SRAESASSVGLPLYGRYVETPEEECNQQESEGGRVRKEERPHIGREVQGY
PRQGPRHGEEEGDNRARNGQEDAKRAAGLQGDELLDVPPGDVEEVPMPRA
QAAAALAKVRAALGEARQALSSVGLSTGGDERFVAESLVQGLAEDGRLAV
AEVALAEASEALSAAPGGSSSEADRAVLGRVLDSTSKQVRAVRRKRALES
QDLQLLEDVLLVWAQGRSTGVNPCLLTTKMLAYYAKARALDEKPSVD back to topmRNA from alignment at P-littoralis_Contig19:898790..906696+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig19.199.1 ID=mRNA_P-littoralis_Contig19.199.1|Name=mRNA_P-littoralis_Contig19.199.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=7907bp|location=Sequence derived from alignment at P-littoralis_Contig19:898790..906696+ (Pylaiella littoralis U1_48)
TCAAGAGCAGAGTCGGCGAGCAGTGTCGGCCTACCTTTGTACGGGCGATA
TGTCGAAACTCCGGAAGAAGAATGTAACCAGCAAGAGAGCGAAGGCGGTC
GCGTCAGAAAAGAAGAGCGCCCGCACATAGGTACGCCGACACGGCTGTTT
TAATACCCTCCATAGAGCTCGGTTTTTTTTTGTGGTCTTTCGTCGAATGT
TGTGTACATTGACGGGGGCTACAATGATACGTGCTAGTACATCCAAAGCT
TGGTTGTAGTGTCTTGAACTCTCCTCATCCACTAAAAATATAACGCTCAG
GTCGAGAGGTGCAAGGCTATCCTCGGCAAGGCCCTCGGCATGGTGAAGAA
GAAGGAGACAATCGGGCGAGAAACGGGCAAGAGGATGCCAAGCGAGCTGC
GGGGTTACAGGTGCGACCTGCTCATTGCCCTGAGGTTTTTCGCCGCCGAG
CCGACTCCATATCTGAAGCTCATTGTTCTCGTCGCCGTCCAACCGGTGCT
CGTTCTTCGGCACCGACAACATCACATACATTTTCCGAGGGGGGGGCTCT
GTCCACGGCTTGCGTAAGTAGAGGATAAGGGTTAGGTTGGTTGCGCAGCA
CTTTATGCAGAGATAGCAGTCGTTCTGTGTCAGATGTACGGTGTAATTTG
ACCGATGATGAGTAGGTGGGTCCGCATCGGAGGTTATGTCTCCCGATCAA
AGCGTACATGTACGCATGATGAAAAGAACGTGGCTTGTTGTTTGGCTGAG
GAAAGGCGCGTACTGCAGGCGTGTCAACGACATAATCACATTGTCTTGCG
CAAATAAAAAGTTGAACTACGTGTCCGGTGTTTACAGAAAAGCTGGGAAC
GAGCGCGCTAGCTTGTCGCTTGTGTTTTTTGTATTTTTCAGGCTTGTGCT
ACAGCGGCAGTGCCTCCGCGAATGGACCGATTGGCCTCCGCCTGCTGTCG
TCCTTCCGCTCGCTTCAGTCTGTCGACGTAACCCGCCCGCACCAGATCGA
TTATTCATTCTCACGAAAATCCAACATGGGCACATTTCGGCACCGCTGCG
TTGTTCGCGTTGTTGCCCTTTTACAGCAATGTACCTTGCCCGATACCAAA
TTTTTCGCCGACAAACAAACGCCAAAAAGATCGAGCGATACGTTTGATTT
CCAACGATCGATGGCGTGGAACACTTCAGTTGTGGATGTGTGGGGGGTGC
ACGCTGCACAGAAAAAAGCGAAAACACAATGCATACGGGGTGTCGTTGTA
TCCTTTGGTTTTCGCCAATTGTCCGTCTGTGTACCCGCCGTCTAGGAACG
GCGTGGATGCGTTACCTTTCATCCTCCAAACACTACTACCGGTCAATAGT
AAACGTATCATCTCTTGACACACCTGCGCCTTCAGCAGCAACCCAACACC
GGTATGTCATTGCCGCAATGGCGTCCCTCTTGCGTCTCCCACCACAATTA
CCGCTTGTACGTACTGTATATTTGTTCATTTTGTCTTGAAACGTTTATGC
TTTTGGGGAGCACCGTGCCGACCGGAGCCCGGGCAGGGCGACCGACTGGA
CACGCCCAGAACCATTGCGCCGCCAGCCACGAGCCGAGCGAAAGCGGCAT
GTCGTTACTGCCTATCCACGGCATCAAAGTGGAGGTGGCAGAATGTTACA
CTGGACCCACAGTGCAACAAGAACCTGAGAAATCAACTTGCGAACTACTT
CTTTCTTGCCCTAAGGAAAAACTAAAAGTCAGGCAAGAGAGAAATCAGAG
TTAGGTGATTCCTCAAATTTTTGTTGCGCCGTGGGTCCAGTGCGAACACC
GCCGTGCATGGATCGGCGGCGCAGCATTCCGCCACCTCCACTTTAATGCC
GTGGATGAGCAGGAACGACATGCCGCTTTCGCTCGGCTCGTAGCAGGCGG
CGTGATGGTTTTGGGCGTGTCCAGTTGGTCGCCATGCCCGGCCTCCGGTC
GGCGCGGTGCTCCCAAGGAGCGCTAAAGCAGTGTGTCATATGCACAAAAT
CGTCATGACGGAAATAAAAAACAACAACGTTCAAGAGGGAGTTGTGGTGG
GAGAGGGAAGAGGGACGTCAACGCCACTGCTTCACTAGAAAACAAGTACG
GGAATGGCGCGCCGGTGTTGGGTTGCTGCTGATGGCGCTGGTGTGTCAAG
ACAAGAGCGGTGTTTAGACGATGAAATGTTCATGCTCCCACGGCGTTCTT
GACGGCGGGTACGCAGACGGGAAGTTTAAAAATAAACAAATGATACGACA
CCCTCCGTATGGTATGCGTTGTGTGTGTCGCTTTCTTTATATGGACAGCG
TGCACCCCCCCCCCCCTCCCGACACACAAACAATTTGTTCCACGCCATCG
ATTGTCAAAAGCCAATTCGGCGTTCGGTCGGCAAAAGTACGGTATTGGGC
AAGATACACTACGTTGTAAAAGAGCAGTGACACGAACAACTACGGCGGTG
CCGAAATGCGCCCCATGTTGGGTTTTCGTGAGAATGAATCGATCTTCAGG
TCAACGAACTGAAGCGAGCGGAAGAACGACAAGACAGAGATCAATCGGTG
CATTCTCGAAGAAACTACCGCTGTAGCATTAGCCTGAAAATCAAAATCCC
ACAATATACGACCAACAGGGGCGCTCGTCTCCACGTTTCTGCTCTATATA
ACCGTACACGAATTATCACTTTTCCATTACGCAAGACGATGTGATTGCTT
TGCGTCTTTCTTGAGCCAAACAACAACCTGCATTTGTTTTTCGTTCCATC
ATGCGTTCATGTACACGTTGGACGGATGCCTCAACGTAAGATGCGGGTCC
AATTACCCATCATCGCTCACAACATACAAAACATCTAATACAGAACGACT
GCTTGCCCCGCACAATGCCGCGCAAAAACCTTGTCCTGCACTTACGCTGG
CCGTGGACGTAGCCCTGTTCCCCCCTTTCGGGAAATGACGTTGTCCGGGC
TGACAACGGACCTCCGGTTCGAAGCCGACGAGAAAATAAGTTTGAGGCCG
CTCTCCGACCAGGGAACCTGCTTAGCGGCGAGAAACCTCTCGGCCTTAAG
TAGTTTCCCCCGACACCCCGCAGCTCGCTTGGCATCCTTCAGCCCGTTAT
CCCATCTGCTTGTCCCCTTTTTTTTCGTCATACCGCGTAACTTCAACCCC
GTAGCCAGGCTTAAGCCGCTCTCCGTATATGTGGAGATTTAACTGAAATC
CTTTTCGGCAGCAGCCACACAGCAGTAGTAGTGTCTCTCGATTTGCCTTC
CGCTTGACTATCCTATCAAGAAGATGCCACATGTTGTGTGCAGATGCCAT
GGTTGAATGTGTTAGCCCCCAACCTCGCGCTCCGTCTCTCGTCTTGACGA
TGTGCGTGGCTTGGCACGACATCTCACAAACCCGACGCACCTTCTTCTTC
TGGCTTCGAAAACGAAAACGCGGCCTGACACATGCGGCGGCACCCGAACG
GGAACGCGACACACTCACATCTGGTTGGTTCAGATTTCTTGCCCAGCTTG
TCGTTTGTGACATACAGCACAACAGCAGTACAGCAGAGTATCGTACGATG
TGTCATGTGTCATCATCAAGCGGCGCACCTGTATACGTACCTGGTATATA
GCACGGCGTACAGAAGTGGTGTGCCTACAACCCTACCCCATGTGCACCAT
TTGATTATTACTCGAAAGTACCTACTGCTGTATCATGTTGCCCCTCGACT
AAAATCTGCGGCGCCGTCTCAGAGTGACAACATCTCGATGTGCCCAGCGT
ACCCCACACGCCACACAACAAGATCTTCGCCCACCTTCACCTACTACTTG
CACGTGGAGATGGAGGAGAGCAAAACCTCCGGTGCTCCCCGAGACCCCCC
GCCTCCGCAGGGGCCACCGCGCCACGGCGGTGGCTCGAACAACAAGACTA
CTGCTCGCCGCGACCCCGCGTCCTCCACGTCTGGTGCAGCTGATTTCGCC
GCCGCGAATCCTTCGACCTCGCCTGCAGCAGTCGCCACAACATGGCAGGA
TGTGGACGACATCGAGCGTGATAACCTTGCGTTCATCGCGGAAGCGGCCT
GGCAATACCCCGACGACGAAGTAGAAGAGGATGACGACGACGAAGACGAC
GACGGTGGCGGCACCGACGGGGCAGGCTCTGCCGCCGGCGGTGCAGGAGA
CTCCACCGACGACAACATCGGCGTCTCTGATGATTCCTTCTTCCAGGAGA
TGTTAGGCTTCGACGGCGAAGGAAGCGCCCTCGATGCAGCGATGCGCAAC
AACCTCTGTGTTAGCGACGCCGAGGTCGAACTCCTCTCCAAACTCCTCGT
CTTCTGGCCCGCCAACCAAGTATGACTTTGAAAACAAAATTCACGCAGCA
GTGGCGGAAGGGAGAGGTCTTTATGTTTCGCTATTTTCCCCGATTCAAAA
GATGCACATCATCTTTTGTGCACGAGGGAAAAGAAATGCGTGCGTTTACT
CCTACAACACAAGAAGGAGCGCGTCTCCTTCCGTGAATTGAATCAATCAG
TTCATCAGGAAAACAGCAAAGGATGTGTTGCGTTCAGAAGCAGGGGCCCT
TCGCCTTGCTGCTTTTTTCGAGGAACCGTACGTACAGTAGTCGCGTCGTA
AACCAAAGACGCTTTGAGATTTGTTTGCCAAATGCAAACTCAAAGCAGGG
TACTCTGTACTCTGTCGTGCCGCGATGTTTTTTTCTGGCCTTCTGTGGTC
AATAAAGCAAGTGATATCCGCGCACGACAGCAGATTTCACCATGGTTCGG
GCTGCACAAGCATGCAGGTCATGAGCTTGGAAATTCCTTGTTTTTTCTAG
ATAAAAGATTGCACAACTACCGTACAGCAATACACTGAATGCCGTGCCCT
CCAAGAGATTTTCGGCGCAATTTGTACTGCTGGACGATATCATGTCCATC
CTGCAACAACAAGCAGCAACACCAATCAAAAAGTTGCATCACGTTGGAAT
CAACAAATGTTATACAAATACAAGTGGCTGGTGAGGTTTACCACGTTAAT
CGTATATTTTTGTTGCTGCCGTTGTCGGTATTTTTACTTCTTGTGAACAG
CATGTATGTACCTCTATCCGTACTGCTGTACGCGCAGCAGTAACATTATT
GGACTACGTCGACGACAGCACGATACGGCTGTAATGTGGACGTCTTTTCG
TACTTGTCCTTTCTTTTCTCTCTGCCATTCTTCGCAGTTTTATTGCCTTC
TCTTCACGATTGGTTGACGGTGTACAAATTCCTTTCGCGCATCCTGGAAT
TGCTGCTGTGCGGGGGTCGGTGGATGATGTTCATTAGTGATCTGCGAGAA
ACTCGTGACCCGCCATTTTTTTTTTAACTCGCATTAATAAATAGTGTTGC
GGAGCGGTGCAGCAGTGACGCGAACAAGAGTAGTTGTAGGCTGTGCGGTT
AAAAATACGGTATTGGTTTTCGTGGGTCAGTAACTATTTCTGCCCCTTCG
AGGTTTGATACGTGTCTTCAAGATTAGGGGCCGATCTTTCGGCGAGAAAT
CGCAAGGGTTACCTCCCACTGGCCATTTTTATTTTCGTTTTTTGTTTTTG
TGGCGTCACCACGAGCACACTCGTACGATCTCTTCGTATGGCGGTGGTAC
CCGGGCTCTTCCGCGCGAACGAGCTTATGCAACAAGAAAAACAAACGTCG
CTACAGCTGCATGATAGTCCTCAAGCTACGACATGCCAAACCGGTAGTTT
CAAATGCTAATGGTGTCGATTGATCGGAGAAAGAAACGCATTTATGATTT
TTTATGGTTTTCTTGTGTTCAAAGCCGACGCCAGTCGTTAGGCGTTCGTA
TTGTCGGTCCGGGTCCTCTACTCCCGGTAGGTGGAGAGAATAAAAGCCAA
ACCCCGAGCTATTGCAGTTGCTACTGCAAGTTGTAGCTTATACTTGCGTT
CAGCACGCCGGAAAAAACTCCACGCCGGGCGAGTAATGCAAACAAACCCT
TCGAAACTGTTTGTTGGTGCTGTCTGGCTGTCGTATTTTTTATTGTCTTG
TTGTGGTCTTCGCATTAACAACCATCACGATCTCTCCTCAGTGCCCTGCC
GGTGTCCATACTCCACCGATCAGGGGTGATTTCCGATGTAGTACGCGGGA
GGTCCCCTCAAGCCACCAAACAACGGCACGACAGAAAAGGAAACTCCGGC
AAAACAAAACGGGCCCCGACATATCGCACAATGCTGTACGAAAATAGAAC
AAGACAAGCGAACCCGGTCCAGAAGAGCCAAGTCAAAAAATGAAAACAAA
GTAAAACAAATTACTGACGGAAAAAAAAAACGGGTTGTACTCTGCAGTGG
CGCTTATGCATGAATGTCCTCCACGGCGGTTCCTTTGCCGAATCAAGTAC
GTACAGTGAAGCAGACTTTGGTGGGCATTCATCCAGGCATTTCTGCTTAC
ATTGTTTCTGGTATCCATCCTAAAACCAGCGCTCCCGAAACACGCTACAA
CATGCACTGCCGCCGGAGAGTAAAGTCGCGTGCTTGTTTCGGTTGAACGT
CGTAATGTTTTTGTTTTTTAGACAAAGTGAAGAAAACAATATCATCGAAA
TGTCGGGAATCGAGAGTGCGCACACACATGCGTTCATGACCACCGAGACC
CCGTTGACTCGTCTACTGTACAACACCCGGTCTGTGCCGCGCAGGCTTGG
TTGTTGTGAGCCTTCCGAAGGGGAACTCTCCCTTCCTCTCTTCCTTGCTC
TGAAAATGTTACAACACCCACATACGCTCACGTCTTTCTAGATGGCAATT
TTACTAATACGTGACACACACGGGCATATCGACCTGTAAAAGCACCGAGC
GTATGGTGGCACCTATATGTCTTCTCTCGTGCACTTGACGACTCTCCGTT
CCAGGCGCGACGCGCACCAAACCATTTTCTATTCGGCGGCTTTGACGTGT
TTTCGGCTTTTCCGTTCCCATATGCTGCGGCGTTTATTTCGAAGGGGGAC
GAGTTGCTGGATGTGCCACCCGGCGATGTAGAGGAAGTCCCGATGCCTCG
TGCACAGGCTGCTGCAGCCCTTGCGAAAGTGCGGGCCGCTCTCGGGGAGG
CCAGGCAAGCCCTCTCCAGCGTTGGTTTGTCGACGGGTGGAGACGAGCGA
TTCGTCGCTGAGAGCCTCGTCCAGGGGCTCGCGGAAGACGGGCGATTGGC
GGTCGCGGAAGTCGCCTTGGCGGAAGCCAGCGAGGCTCTATCCGCAGCAC
CGGGTGGCAGCAGCAGCGAGGCAGATCGAGCTGTGTTAGGGCGGGTCTTG
GATTCAACAAGCAAGCAAGTTAGGGCGGTCAGGCGAAAGCGGGCCCTGGA
GTCCCAGGACCTGCAGCTCCTGGAGGATGTGCTTCTTGTTTGGGCTCAAG
GGAGATCAACGTGGGTACCGGTGTCGCCTATTTCCTGATTCTATAATTAC
AAACAAAAGAGTGTTGTTGCCATGTCTGGTCCTTCTTGTTCAGGTCTCCC
CTTTCGTGTTTGCTCTTTGACAGAATCCCCCCCCCCCCCCTTCACCCCGG
CCCGCTCCACCTCGGCTGGCGCACCCCAAGGACGCGAGCATACAGAACCG
AAACAATTCGCTTCACCGCTAAAAACCCATACGGCTAGTATTGCCTTCTC
TCCCCCTCTGTCCCTCTGTTGTGTTGAGTTCTCTTGGTGGGGGGCGGGCG
GGCGTATCTACGGGATAGAGGGTTGTAATCTCTGGTCGTCAAGAGCCGTC
AGGTGTTTGCGTGCTCTTGCCTCCCCTCATGACCAGTTCTACATGGCACC
CGTGTTGCTCCTCTAAAATGTAAACGTGGCTCGGTTCCCTTCGGATTGAT
TATTACTCTCCCGTACCTTCAGGGGCGTGAACCCGTGCTTGTTGACGACC
AAGATGCTGGCGTACTACGCCAAGGCGCGGGCTCTGGACGAGAAACCATC
CGTGGAC back to topCoding sequence (CDS) from alignment at P-littoralis_Contig19:898790..906696+ >mRNA_P-littoralis_Contig19.199.1 ID=mRNA_P-littoralis_Contig19.199.1|Name=mRNA_P-littoralis_Contig19.199.1|organism=Pylaiella littoralis U1_48|type=CDS|length=741bp|location=Sequence derived from alignment at P-littoralis_Contig19:898790..906696+ (Pylaiella littoralis U1_48)
TCAAGAGCAGAGTCGGCGAGCAGTGTCGGCCTACCTTTGTACGGGCGATA
TGTCGAAACTCCGGAAGAAGAATGTAACCAGCAAGAGAGCGAAGGCGGTC
GCGTCAGAAAAGAAGAGCGCCCGCACATAGGTCGAGAGGTGCAAGGCTAT
CCTCGGCAAGGCCCTCGGCATGGTGAAGAAGAAGGAGACAATCGGGCGAG
AAACGGGCAAGAGGATGCCAAGCGAGCTGCGGGGTTACAGGGGGACGAGT
TGCTGGATGTGCCACCCGGCGATGTAGAGGAAGTCCCGATGCCTCGTGCA
CAGGCTGCTGCAGCCCTTGCGAAAGTGCGGGCCGCTCTCGGGGAGGCCAG
GCAAGCCCTCTCCAGCGTTGGTTTGTCGACGGGTGGAGACGAGCGATTCG
TCGCTGAGAGCCTCGTCCAGGGGCTCGCGGAAGACGGGCGATTGGCGGTC
GCGGAAGTCGCCTTGGCGGAAGCCAGCGAGGCTCTATCCGCAGCACCGGG
TGGCAGCAGCAGCGAGGCAGATCGAGCTGTGTTAGGGCGGGTCTTGGATT
CAACAAGCAAGCAAGTTAGGGCGGTCAGGCGAAAGCGGGCCCTGGAGTCC
CAGGACCTGCAGCTCCTGGAGGATGTGCTTCTTGTTTGGGCTCAAGGGAG
ATCAACGGGCGTGAACCCGTGCTTGTTGACGACCAAGATGCTGGCGTACT
ACGCCAAGGCGCGGGCTCTGGACGAGAAACCATCCGTGGAC back to top
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