prot_P-littoralis_Contig189.94.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig189.94.2
Unique Nameprot_P-littoralis_Contig189.94.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length142
Homology
BLAST of mRNA_P-littoralis_Contig189.94.2 vs. uniprot
Match: A0A6H5JWW3_9PHAE (MULE domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWW3_9PHAE)

HSP 1 Score: 187 bits (475), Expect = 2.690e-52
Identity = 88/134 (65.67%), Postives = 106/134 (79.10%), Query Frame = 0
Query:    1 MSHIFWMTATQVSLSTHYGHVLLYDDTAVKNKFRLPLGPGVVIDGEYFSRIVFQMLASDTRAETFEWMLSAWEDARRG-APEAFIQDADGACTQAVDKVYPDAKKLRCLWHLGKNVFEKCHPLLRADYPVSFSQ 133
            M+HIFWMTA+QV+LS  YGHV LYDDTAVKNK+RLP+G G VIDGEYF+R+ FQM++SDT+AETFEWM+ +W + R G  P+ FIQDADGACT A +KV+  AKKLRCLW L KNV EK   +L  D+  SF Q
Sbjct:   92 MTHIFWMTASQVALSIKYGHVRLYDDTAVKNKYRLPVGIGAVIDGEYFTRVAFQMISSDTQAETFEWMMESWMETRGGEGPDVFIQDADGACTLAANKVFKGAKKLRCLWRLWKNVKEKLGSILGKDFAASFRQ 225          
BLAST of mRNA_P-littoralis_Contig189.94.2 vs. uniprot
Match: A0A6H5JJG6_9PHAE (SWIM-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJG6_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 6.610e-47
Identity = 79/138 (57.25%), Postives = 103/138 (74.64%), Query Frame = 0
Query:    1 MSHIFWMTATQVSLSTHYGHVLLYDDTAVKNKFRLPLGPGVVIDGEYFSRIVFQMLASDTRAETFEWMLSAWEDARRGAPEAFIQDADGACTQAVDKVYPDAKKLRCLWHLGKNVFEKCHPLLRADYPVSFSQAHRAR 138
            +SH+FWMTA Q++L++ YG VLLYDDTAVKN++RLPLG GVVIDGEYFSRIVFQ L  DT A TFEW+L  ++ AR  AP+ F+QDAD A   A DKV+PDA+K RC+WHLG+N+ +    +L + +     Q ++ R
Sbjct:  320 LSHLFWMTAEQIALASRYGSVLLYDDTAVKNRYRLPLGLGVVIDGEYFSRIVFQSLTVDTTAVTFEWVLEEFKAARGAAPDMFLQDADAAMGLAADKVFPDARKRRCMWHLGQNLMKNLKKVLGSAFQAFLDQFYKTR 457          
BLAST of mRNA_P-littoralis_Contig189.94.2 vs. uniprot
Match: A0A6H5K3E8_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3E8_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 1.570e-34
Identity = 66/132 (50.00%), Postives = 88/132 (66.67%), Query Frame = 0
Query:    1 MSHIFWMTATQVSLSTHYGHVLLYDDTAVKNKFRLPLGPGVVIDGEYFSRIVFQMLASDTRAETFEWMLSAWEDARRGA-PEAFIQDADGACTQAVDKVYPDAKKLRCLWHLGKNVFEKCHPLLRADYPVSF 131
            ++HI+W T  QV L   YGHV LYDDTAVKN++R+PLG   VID EY +RIV Q + +DT  +TF WML +  ++R G  P+ FIQDAD A T AV +V+PDA   RCLWHL +N+ +    +L  +   +F
Sbjct:   60 LTHIWWQTREQVVLWNRYGHVALYDDTAVKNRYRMPLGVLAVIDSEYRTRIVGQSITADTTTDTFLWMLKSALESRGGKQPDIFIQDADAAMTAAVREVFPDALARRCLWHLNQNIIKALAKVLGGEMKTAF 191          
BLAST of mRNA_P-littoralis_Contig189.94.2 vs. uniprot
Match: A0A6H5K5C5_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5C5_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 1.710e-33
Identity = 65/127 (51.18%), Postives = 86/127 (67.72%), Query Frame = 0
Query:    1 MSHIFWMTATQVSLSTHYGHVLLYDDTAVKNKFRLPLGPGVVIDGEYFSRIVFQMLASDTRAETFEWMLSAWEDARRGA-PEAFIQDADGACTQAVDKVYPDAKKLRCLWHLGKNVFEKCHPLLRAD 126
            ++HI+W T  QV L   YGHV LYDDTAVKN++R+PLG   VID EY +RIV Q + +DT  +TF WML +  ++R G  P+ FIQDAD A T AV +V+PDA   RCLWHL +N+ +    +L  +
Sbjct:   60 LTHIWWQTREQVVLWNRYGHVALYDDTAVKNRYRMPLGVLAVIDSEYRTRIVGQSITADTTTDTFLWMLKSALESRGGKQPDIFIQDADAAMTAAVREVFPDALARRCLWHLNQNIIKALAKVLGGE 186          
BLAST of mRNA_P-littoralis_Contig189.94.2 vs. uniprot
Match: A0A6H5KUA5_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUA5_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 3.170e-33
Identity = 64/127 (50.39%), Postives = 86/127 (67.72%), Query Frame = 0
Query:    1 MSHIFWMTATQVSLSTHYGHVLLYDDTAVKNKFRLPLGPGVVIDGEYFSRIVFQMLASDTRAETFEWMLSAWEDARRGA-PEAFIQDADGACTQAVDKVYPDAKKLRCLWHLGKNVFEKCHPLLRAD 126
            ++HI+W T  QV+L   YGHV LYDDTAVKN++R+PLG   VID EY +RIV Q++ +DT  +   WML +  ++R G  P+ FIQDAD A T AV +V+PDA   RCLWHL +N+ +    +L  D
Sbjct:  229 LTHIWWQTREQVALWNRYGHVALYDDTAVKNRYRMPLGVLAVIDSEYRTRIVGQIITADTTTDALLWMLKSALESRGGKQPDIFIQDADAAMTAAVREVFPDALARRCLWHLNQNIIKALAKVLGGD 355          
BLAST of mRNA_P-littoralis_Contig189.94.2 vs. uniprot
Match: D8LU83_ECTSI (SWIM-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU83_ECTSI)

HSP 1 Score: 130 bits (327), Expect = 1.600e-32
Identity = 62/117 (52.99%), Postives = 82/117 (70.09%), Query Frame = 0
Query:    1 MSHIFWMTATQVSLSTHYGHVLLYDDTAVKNKFRLPLGPGVVIDGEYFSRIVFQMLASDTRAETFEWMLSAWEDARRGAPEAFIQDADGACTQAVDKVYPDAKKLRCLWHLGKNVFE 117
            ++HI+W T  QV+L   YGHV LYDDTAVKN++R+PLG   V+D EY +RIV Q + +DT  +TF WML +  ++R   P+ FIQDAD A T AV +V+PDA   R LWHL +NV +
Sbjct:  180 LTHIWWQTKEQVALWNRYGHVALYDDTAVKNRYRMPLGVLAVVDSEYRTRIVGQSITADTTTDTFLWMLKSALESRGKQPDTFIQDADAAMTAAVREVFPDALARRNLWHLNQNVIK 296          
BLAST of mRNA_P-littoralis_Contig189.94.2 vs. uniprot
Match: A0A6H5JZ86_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ86_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 8.630e-32
Identity = 62/124 (50.00%), Postives = 82/124 (66.13%), Query Frame = 0
Query:    4 IFWMTATQVSLSTHYGHVLLYDDTAVKNKFRLPLGPGVVIDGEYFSRIVFQMLASDTRAETFEWMLSAWEDARRGA-PEAFIQDADGACTQAVDKVYPDAKKLRCLWHLGKNVFEKCHPLLRAD 126
            + W    QV+L   YGHV LYDDTAVKN++R+PLG   VID EY +RIV Q + +DT  +TF+WML +  ++R G  P+  IQDAD A T AV +V+PDA   RCLWHL +N+ +    +L  D
Sbjct:   10 LIWSLFKQVALWNRYGHVALYDDTAVKNRYRMPLGVLAVIDSEYRTRIVGQSITADTTTDTFQWMLKSALESRGGKQPDISIQDADAAMTAAVREVFPDALARRCLWHLNQNIIKALAKVLGGD 133          
BLAST of mRNA_P-littoralis_Contig189.94.2 vs. uniprot
Match: A0A6H5JUZ2_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUZ2_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 1.380e-31
Identity = 64/127 (50.39%), Postives = 87/127 (68.50%), Query Frame = 0
Query:    1 MSHIFWMTATQVSLSTHYGHVLLYDDTAVKNKFRLPLGPGVVIDGEYFSRIVFQMLASDTRAETFEWMLSAWEDARRGA-PEAFIQDADGACTQAVDKVYPDAKKLRCLWHLGKNVFEKCHPLLRAD 126
            ++HI+W T  QV+L   YGHV LYDDTAVKN++R+PLG   VID EY +RIV Q++ +DT  +TF  ML +  ++R G  P+ FIQDAD A T AV +V+PDA   RCLW+L +N+ +    +L  D
Sbjct:  280 LTHIWWQTREQVALWNRYGHVALYDDTAVKNRYRMPLGVLAVIDSEYRTRIVGQIITADTTTDTFLSMLKSALESRGGKQPDIFIQDADAAMTAAVREVFPDALARRCLWYLNQNIIKALAKVLGGD 406          
BLAST of mRNA_P-littoralis_Contig189.94.2 vs. uniprot
Match: A0A6H5LMZ3_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LMZ3_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 2.640e-31
Identity = 64/127 (50.39%), Postives = 85/127 (66.93%), Query Frame = 0
Query:    1 MSHIFWMTATQVSLSTHYGHVLLYDDTAVKNKFRLPLGPGVVIDGEYFSRIVFQMLASDTRAETFEWMLSAWEDARRGA-PEAFIQDADGACTQAVDKVYPDAKKLRCLWHLGKNVFEKCHPLLRAD 126
            ++HI+W T  QV+L    GHV LYDDTAVKN++R+PLG   VID EY +RIV Q + +DT  +TF WML +  ++R G  P+ FIQDA  A T AV +V+PDA   RCLWHL +N+ +    +L  D
Sbjct:  557 LTHIWWQTREQVALWNRCGHVALYDDTAVKNRYRMPLGVLAVIDSEYRTRIVGQSITADTTTDTFLWMLKSALESRGGKQPDIFIQDAVAAMTAAVREVFPDALARRCLWHLKQNIIKALAKVLGGD 683          
BLAST of mRNA_P-littoralis_Contig189.94.2 vs. uniprot
Match: A0A6H5KZF1_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZF1_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 3.610e-29
Identity = 57/118 (48.31%), Postives = 79/118 (66.95%), Query Frame = 0
Query:    1 MSHIFWMTATQVSLSTHYGHVLLYDDTAVKNKFRLPLGPGVVIDGEYFSRIVFQMLASDTRAETFEWMLSAWEDARRGA-PEAFIQDADGACTQAVDKVYPDAKKLRCLWHLGKNVFE 117
            ++HI+W +  QV+L   YGH+ LYDDTAVKN++R+PLG   VID +Y +R + Q   +D   +TF WML     +R G  P+ FIQDAD A T AV +V+P+A   RCLWHL +N+ +
Sbjct:  265 LTHIWWQSREQVALWNRYGHIALYDDTAVKNRYRMPLGVLAVIDSDYRTRTIGQSTTADITTDTFLWMLKGALRSRGGKRPDIFIQDADAAMTAAVREVFPEALARRCLWHLNQNIMK 382          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig189.94.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JWW3_9PHAE2.690e-5265.67MULE domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A6H5JJG6_9PHAE6.610e-4757.25SWIM-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5K3E8_9PHAE1.570e-3450.00SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K5C5_9PHAE1.710e-3351.18MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KUA5_9PHAE3.170e-3350.39MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LU83_ECTSI1.600e-3252.99SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JZ86_9PHAE8.630e-3250.00MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JUZ2_9PHAE1.380e-3150.39SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5LMZ3_9PHAE2.640e-3150.39SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KZF1_9PHAE3.610e-2948.31MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018289MULE transposase domainPFAMPF10551MULEcoord: 21..114
e-value: 5.4E-12
score: 46.0
IPR031052FHY3/FAR1 familyPANTHERPTHR31669PROTEIN FAR1-RELATED SEQUENCE 10-RELATEDcoord: 3..120
NoneNo IPR availablePANTHERPTHR31669:SF161PROTEIN FAR-RED ELONGATED HYPOCOTYL 3coord: 3..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig189contigP-littoralis_Contig189:438719..440229 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig189.94.2mRNA_P-littoralis_Contig189.94.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig189 433786..440570 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig189.94.2 ID=prot_P-littoralis_Contig189.94.2|Name=mRNA_P-littoralis_Contig189.94.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=142bp
MSHIFWMTATQVSLSTHYGHVLLYDDTAVKNKFRLPLGPGVVIDGEYFSR
IVFQMLASDTRAETFEWMLSAWEDARRGAPEAFIQDADGACTQAVDKVYP
DAKKLRCLWHLGKNVFEKCHPLLRADYPVSFSQAHRARYVF*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018289MULE_transposase_dom
IPR031052FHY3/FAR1