mRNA_P-littoralis_Contig189.65.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig189.65.3 vs. uniprot
Match: D7FJQ4_ECTSI (Enoyl coenzyme A hydratase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJQ4_ECTSI) HSP 1 Score: 464 bits (1194), Expect = 6.870e-159 Identity = 232/273 (84.98%), Postives = 251/273 (91.94%), Query Frame = 2
Query: 227 MQVEINRPDKANAMSSSFFAELGDCFGRLAVDPACRAIVLCGSGNVFSSGLDLEEHAPTFLAMTSPSPAGDLGRDPARKSFEIARFVSGMQESLASIDRCPKPVICAVHSACIGGGVDLVCATDIRLASSDAWFSIKEASFQRGVDIGLCADLGTLQRLPKLIGSDSLARELVFTARKFPAAEALKAGFLSTVLDDKQELMDHAVKLGSQIAARSPVAMQGSKVNLNYGRDHTIAQALQHQALWSSVMLQTGDIPAAMMSAQKRKPPPPFPPL 1045
MQVEINRPDKANAM++SFFAEL +CF LA+DPAC A+VLCGSG VFSSGLDLEEHA TF+ MT+P+PAGD+ RDPARKS +IARFVSGMQ+SLAS+DRCPKPVICAVHSACIGGGVDLVCATDIRLASSDAWFSIKE VDIGLCADLGTLQRLPKLIGS+SLARELVFTARKFPA EAL+AGFLS V DDKQ LM+HAV+LGS IAARSPVAMQGSK+NLNY RDHT+AQALQHQALWSSVMLQTGDIPAA+ SAQKRKPPPPFPPL
Sbjct: 1 MQVEINRPDKANAMNASFFAELRECFDSLAMDPACLAVVLCGSGKVFSSGLDLEEHAQTFMEMTTPAPAGDVTRDPARKSVQIARFVSGMQDSLASLDRCPKPVICAVHSACIGGGVDLVCATDIRLASSDAWFSIKE------VDIGLCADLGTLQRLPKLIGSESLARELVFTARKFPATEALQAGFLSAVHDDKQALMEHAVELGSHIAARSPVAMQGSKINLNYARDHTVAQALQHQALWSSVMLQTGDIPAAIASAQKRKPPPPFPPL 267
BLAST of mRNA_P-littoralis_Contig189.65.3 vs. uniprot
Match: A0A6H5KUS5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUS5_9PHAE) HSP 1 Score: 356 bits (914), Expect = 1.600e-117 Identity = 180/213 (84.51%), Postives = 193/213 (90.61%), Query Frame = 2
Query: 407 LAMTSPSPAGDLGRDPARKSFEIARFVSGMQESLASIDRCPKPVICAVHSACIGGGVDLVCATDIRLASSDAWFSIKEASFQRGVDIGLCADLGTLQRLPKLIGSDSLARELVFTARKFPAAEALKAGFLSTVLDDKQELMDHAVKLGSQIAARSPVAMQGSKVNLNYGRDHTIAQALQHQALWSSVMLQTGDIPAAMMSAQKRKPPPPFPPL 1045
+ MT+P+PAGDL RDPARKS +IARFV GMQ+SLAS+DRCPKPVICAVHSACIGGGVDLVCA DIRLASSDAWFSIKE VDIGLCADLGTLQRLPKLIGS+SLARELVFTARKFPA EAL+AGFLS V DDKQ LM HAV+LGSQIAA SPVAMQGSK+NLNY RDHT+AQALQHQALWSSVMLQTGDIPAA+ SA+KRK PPPFPPL
Sbjct: 1 MEMTTPAPAGDLTRDPARKSVQIARFVGGMQDSLASLDRCPKPVICAVHSACIGGGVDLVCAADIRLASSDAWFSIKE------VDIGLCADLGTLQRLPKLIGSESLARELVFTARKFPATEALQAGFLSAVHDDKQALMGHAVELGSQIAAHSPVAMQGSKINLNYARDHTVAQALQHQALWSSVMLQTGDIPAAIASARKRKSPPPFPPL 207
BLAST of mRNA_P-littoralis_Contig189.65.3 vs. uniprot
Match: A0A6P8I096_ACTTE (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8I096_ACTTE) HSP 1 Score: 285 bits (730), Expect = 3.080e-88 Identity = 142/287 (49.48%), Postives = 200/287 (69.69%), Query Frame = 2
Query: 167 SVSNYEQFRDLAVTEPATAVMQVEINRPDKANAMSSSFFAELGDCFGRLAVDPACRAIVLCGSGNVFSSGLDLEEHAPTFLAMTSPSPAGDLGRDPARKSFEIARFVSGMQESLASIDRCPKPVICAVHSACIGGGVDLVCATDIRLASSDAWFSIKEASFQRGVDIGLCADLGTLQRLPKLIGSDSLARELVFTARKFPAAEALKAGFLSTVLDDKQELMDHAVKLGSQIAARSPVAMQGSKVNLNYGRDHTIAQALQHQALWSSVMLQTGDIPAAMMSAQKRKPP 1027
S +Y+ + LAV++PA V++VE+NRP+K NAM+ +F+ E+ +CF ++ D CR +V+ G+G +F++GLDL + A F+ AG D ARK+ E+ + + QES + I++CPKPVI A+HSACIGGGVDLVCA DIRL SSDAWF IKE VDIGL AD+GTLQRLPK++G+DSL REL +TAR+ PA EA +AG +S + DK+ L+ A + S+IA++SPVA+ G+K NLNY RDH++ + L + A W+ MLQT DI A+ + ++ P
Sbjct: 44 STDSYK-YETLAVSQPADHVLRVELNRPEKRNAMNQAFWREMVECFNKITNDSDCRXVVVTGAGKIFTAGLDLMDMAGVFMQ------AGPENADAARKAAELRKIILSYQESFSVIEKCPKPVIAAIHSACIGGGVDLVCACDIRLCSSDAWFQIKE------VDIGLAADVGTLQRLPKIVGNDSLVRELSYTARRLPANEAKEAGLVSHIYPDKESLISAATAMASKIASKSPVAVMGTKHNLNYSRDHSVEEGLNYMATWNMSMLQTEDIMKAVQAEMAKEKP 317
BLAST of mRNA_P-littoralis_Contig189.65.3 vs. uniprot
Match: C1BJW1_OSMMO (Delta3,5-delta2,4-dienoyl-CoA isomerase, mitochondrial n=3 Tax=Osmeridae TaxID=8012 RepID=C1BJW1_OSMMO) HSP 1 Score: 280 bits (716), Expect = 2.230e-86 Identity = 141/280 (50.36%), Postives = 195/280 (69.64%), Query Frame = 2
Query: 188 FRDLAVTEPATAVMQVEINRPDKANAMSSSFFAELGDCFGRLAVDPACRAIVLCGSGNVFSSGLDLEEHAPTFLAMTSPSPAGDLGRDPARKSFEIARFVSGMQESLASIDRCPKPVICAVHSACIGGGVDLVCATDIRLASSDAWFSIKEASFQRGVDIGLCADLGTLQRLPKLIGSDSLARELVFTARKFPAAEALKAGFLSTVLDDKQELMDHAVKLGSQIAARSPVAMQGSKVNLNYGRDHTIAQALQHQALWSSVMLQTGDIPAAMMSAQKRKPP 1027
F L+++ PATAV VE++RP+K NAM+ +F++E+ DCF ++A DP CR +V+ G+G +F+SG+DL + A L P GD D AR S+ + R ++ QE+ + I++CPKPV+ AVHSACIGGGVDL+ A DIRL + DAWF +KE VDIGL AD+GTLQRLPK+IGS SL EL TARK A EA +G +S V DDK+ +M A++L +IA RSPVA+QG+KVNL Y RDH++A+ L + A W+ MLQT D+ + ++ ++K P
Sbjct: 33 FTTLSISHPATAVTHVELHRPEKRNAMNRAFWSEMVDCFSQIAADPDCRVVVVSGAGKMFTSGIDLMDMASDIL-----QPEGD---DMARTSWNMRRIITKYQETFSVIEKCPKPVVVAVHSACIGGGVDLITACDIRLCTQDAWFQVKE------VDIGLAADVGTLQRLPKVIGSRSLVNELALTARKMYADEAKSSGLVSRVFDDKEAMMAAALELAGEIAGRSPVAVQGTKVNLIYSRDHSVAEGLDYMATWNMSMLQTQDVMKSAQASMEKKSP 298
BLAST of mRNA_P-littoralis_Contig189.65.3 vs. uniprot
Match: A0A6P4Y9I2_BRABE (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like isoform X1 n=4 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4Y9I2_BRABE) HSP 1 Score: 277 bits (709), Expect = 2.460e-85 Identity = 142/286 (49.65%), Postives = 198/286 (69.23%), Query Frame = 2
Query: 170 VSNYEQFRDLAVTEPATAVMQVEINRPDKANAMSSSFFAELGDCFGRLAVDPACRAIVLCGSGNVFSSGLDLEEHAPTFLAMTSPSPAGDLGRDPARKSFEIARFVSGMQESLASIDRCPKPVICAVHSACIGGGVDLVCATDIRLASSDAWFSIKEASFQRGVDIGLCADLGTLQRLPKLIGSDSLARELVFTARKFPAAEALKAGFLSTVLDDKQELMDHAVKLGSQIAARSPVAMQGSKVNLNYGRDHTIAQALQHQALWSSVMLQTGDIPAAMMSA-QKRKP 1024
+S Y QF LAVT P VMQVE+NRP+K NAM+ +F+ E+ +CF +A +P RA+V+ G+G +F++GLDL + + G D ARK+ + + QE+ + I++CPKPVI AVHSAC+GGGVDL+ A DIRL + DAWF IKE VDIGL AD+GTLQRLPK+IG+DSLAREL FT+R+F A EA + G +S + D++ L++ A++L S IA++SP+A+QG+KV++ Y RDH + + L H ALW+S MLQ+ D+ A+ + QKRKP
Sbjct: 32 MSGY-QFESLAVTRPREHVMQVEMNRPEKRNAMNQAFWREMVECFQAIAAEPDIRAVVVSGAGKIFTAGLDLGDTMSSLFVE---------GADIARKAIRLGPKIRQYQETFSVIEKCPKPVIAAVHSACVGGGVDLITACDIRLCTQDAWFQIKE------VDIGLAADVGTLQRLPKVIGNDSLARELAFTSRRFEAEEAKQMGLVSRIYPDREALLEGALELASTIASKSPIAVQGTKVSMVYSRDHPVQEGLDHVALWNSTMLQSEDVVEAVQAGMQKRKP 301
BLAST of mRNA_P-littoralis_Contig189.65.3 vs. uniprot
Match: A0A0D2UKP5_CAPO3 (Enoyl coenzyme A hydratase 1 n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2UKP5_CAPO3) HSP 1 Score: 277 bits (709), Expect = 3.180e-85 Identity = 144/312 (46.15%), Postives = 205/312 (65.71%), Query Frame = 2
Query: 92 LSAAXXXXXXXNRPVTTTGSCSGNESVSNYEQFRDLAVTEPATAVMQVEINRPDKANAMSSSFFAELGDCFGRLAVDPACRAIVLCGSGNVFSSGLDLEEHAPTFLAMTSPSPAGDLGRDPARKSFEIARFVSGMQESLASIDRCPKPVICAVHSACIGGGVDLVCATDIRLASSDAWFSIKEASFQRGVDIGLCADLGTLQRLPKLIGSDSLARELVFTARKFPAAEALKAGFLSTVLDDKQELMDHAVKLGSQIAARSPVAMQGSKVNLNYGRDHTIAQALQHQALWSSVMLQTGDIPAAMMSAQKRKPP 1027
+SAA RP +T+ + + +E F LAVT PA V+QVE+NRP K NA++ +AE+ DCF R+A D CRA+++ G+G +F++GLDL++ + F D AR++ + + + Q+S +I++CP PVI AVH+ CIG GVDL+ A DIRL ++DA+F +KE VD+GL AD+GTLQRLPK+IGSDSL REL FTARK A EA + G +S V D+QEL A+++ S IA++SPVA+ GSK+NLNY RDH++A++L++ A W+ MLQT DI A+MS+ + P
Sbjct: 14 VSAALRHLATGARPFSTSMAAASAAEAPKFE-FETLAVTRPAQHVIQVELNRPKKLNAVNRVCWAEMRDCFARIATDRDCRAVIITGAGRMFTAGLDLQDASAMFTLEAD---------DAARRALLLRQIIKDYQDSFTNIEKCPTPVIAAVHNGCIGAGVDLITACDIRLCTADAYFQVKE------VDVGLAADVGTLQRLPKVIGSDSLTRELAFTARKMLAPEAHQRGLVSHVYADEQELRKKALEMASLIASKSPVAVVGSKINLNYSRDHSVAESLEYMATWNQAMLQTEDIMKAVMSSMDKSTP 309
BLAST of mRNA_P-littoralis_Contig189.65.3 vs. uniprot
Match: A0A2B4RA31_STYPI (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial n=3 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RA31_STYPI) HSP 1 Score: 277 bits (709), Expect = 4.110e-85 Identity = 138/281 (49.11%), Postives = 195/281 (69.40%), Query Frame = 2
Query: 185 QFRDLAVTEPATAVMQVEINRPDKANAMSSSFFAELGDCFGRLAVDPACRAIVLCGSGNVFSSGLDLEEHAPTFLAMTSPSPAGDLGRDPARKSFEIARFVSGMQESLASIDRCPKPVICAVHSACIGGGVDLVCATDIRLASSDAWFSIKEASFQRGVDIGLCADLGTLQRLPKLIGSDSLARELVFTARKFPAAEALKAGFLSTVLDDKQELMDHAVKLGSQIAARSPVAMQGSKVNLNYGRDHTIAQALQHQALWSSVMLQTGDIPAAMMSAQKRKPP 1027
+F LAVT+P V+QVE+NRPDK NAM+ +F+ E+ DCF ++A D CRA+VL G+G +F++GLDL + ++ DL +P+R++ + + + +Q+S +I++CP+PVI A HSAC+GGGVD++C+ DIRL SSDAWF IKE +DIGL ADLGTLQ+ PK+IG+DSLAREL FT R+F A EAL+ GF+S V + L+ A++L QIA +SPVAM G+K NLN+ RDH+ + L++ A W+ MLQT DI A+ S ++ P
Sbjct: 52 KFETLAVTKPLDHVIQVELNRPDKRNAMNGTFWREMVDCFRQIADDADCRAVVLTGAGKIFTAGLDLMDMGSNLMS-------SDL--EPSRRAHLLRKLILFLQDSFRTIEKCPQPVIAAFHSACVGGGVDMICSCDIRLCSSDAWFQIKE------IDIGLAADLGTLQKFPKIIGNDSLARELCFTGRRFTAEEALQFGFVSRVSPGRDSLVKEALELAGQIAKKSPVAMAGTKHNLNFSRDHSAQEGLEYMATWNMAMLQTEDILKAVQSGMNKEEP 317
BLAST of mRNA_P-littoralis_Contig189.65.3 vs. uniprot
Match: A0A1S3K0E9_LINUN (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3K0E9_LINUN) HSP 1 Score: 276 bits (705), Expect = 1.070e-84 Identity = 135/297 (45.45%), Postives = 208/297 (70.03%), Query Frame = 2
Query: 134 VTTTGSCSGNESVSNYEQFRDLAVTEPATAVMQVEINRPDKANAMSSSFFAELGDCFGRLAVDPACRAIVLCGSGNVFSSGLDLEEHAPTFLAMTSPSPAGDLGRDPARKSFEIARFVSGMQESLASIDRCPKPVICAVHSACIGGGVDLVCATDIRLASSDAWFSIKEASFQRGVDIGLCADLGTLQRLPKLIGSDSLARELVFTARKFPAAEALKAGFLSTVLDDKQELMDHAVKLGSQIAARSPVAMQGSKVNLNYGRDHTIAQALQHQALWSSVMLQTGDIPAAMMSAQKRKP 1024
+T+ SG + Y F L VT+P V+QVE+NRP+K NAM+++F+ E+ +CF +++ DP CR++V+ G+G +F++G+DL+E A + + M S D+GR + IAR+ Q++ +++CPKPVI AVH+AC+GGG+DL+ A DIR S DAWF +KE VD+GL AD+GTLQRLPK++G+DSLAREL +TARK A EA++ G +S +L D++ ++ A++ + IA++SP+A+QGSKV++ Y RDH++ + L+H A W+S MLQ+ D+ A M+A ++KP
Sbjct: 24 LTSRKMSSGGLEAAGYS-FETLKVTKPREYVLQVELNRPEKRNAMNAAFWREMVECFNKVSTDPDCRSVVVSGAGKLFTAGIDLQEIA-SLMPMES-----DVGRKSMKLKGAIARY----QDTFTCMEKCPKPVIVAVHNACVGGGIDLITACDIRYCSQDAWFQVKE------VDVGLAADVGTLQRLPKVVGNDSLARELAYTARKMMADEAMRCGLVSRILPDRESTIEAAIETAALIASKSPIAVQGSKVSIVYSRDHSVQEGLEHIACWNSAMLQSEDVMTAAMAAVEKKP 303
BLAST of mRNA_P-littoralis_Contig189.65.3 vs. uniprot
Match: A0A2C9JJ31_BIOGL (Uncharacterized protein n=2 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9JJ31_BIOGL) HSP 1 Score: 275 bits (704), Expect = 1.550e-84 Identity = 139/287 (48.43%), Postives = 196/287 (68.29%), Query Frame = 2
Query: 167 SVSNYEQFRDLAVTEPATAVMQVEINRPDKANAMSSSFFAELGDCFGRLAVDPACRAIVLCGSGNVFSSGLDLEEHAPTFLAMTSPSPAGDLGRDPARKSFEIARFVSGMQESLASIDRCPKPVICAVHSACIGGGVDLVCATDIRLASSDAWFSIKEASFQRGVDIGLCADLGTLQRLPKLIGSDSLARELVFTARKFPAAEALKAGFLSTVLDDKQELMDHAVKLGSQIAARSPVAMQGSKVNLNYGRDHTIAQALQHQALWSSVMLQTGDIPAAMMSAQKRKPP 1027
S + YE F L +T P + VE+NRPDK NAM+++F+ ++ +CF +L+VDP CR IVL G+G +F++GLDL E+ ++S S +D +RKSF+I + + +QES I++CPKPVI AVH+ CIGGG+D++ D+R + DAWF IKE VDIGL ADLGTLQR PK+IG+DSL REL +T RKF A EA GF+S +L DK L++ A+ + QIA++SPVA+QG KVN Y RDH + Q L++ A W+S MLQ+ D+ A+ +A +++ P
Sbjct: 32 STTGYE-FETLKITSPKQFIKNVELNRPDKRNAMNTTFWKDIYNCFTKLSVDPDCRVIVLSGAGKMFTAGLDLYENEIFKSLLSSDS------QDSSRKSFKILKGIQELQESFNVIEKCPKPVIAAVHNGCIGGGIDMIACCDMRYCTQDAWFQIKE------VDIGLAADLGTLQRFPKIIGNDSLYRELAYTGRKFDAEEAKSIGFVSRILPDKNTLLEAAILIAEQIASKSPVAVQGIKVNSVYSRDHGVYQGLEYMATWNSTMLQSEDVGKAVSAAIQKETP 305
BLAST of mRNA_P-littoralis_Contig189.65.3 vs. uniprot
Match: UPI0001CB95FD (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CB95FD) HSP 1 Score: 275 bits (703), Expect = 2.250e-84 Identity = 137/291 (47.08%), Postives = 196/291 (67.35%), Query Frame = 2
Query: 152 CSGNESVSN-YEQFRDLAVTEPATAVMQVEINRPDKANAMSSSFFAELGDCFGRLAVDPACRAIVLCGSGNVFSSGLDLEEHAPTFLAMTSPSPAGDLGRDPARKSFEIARFVSGMQESLASIDRCPKPVICAVHSACIGGGVDLVCATDIRLASSDAWFSIKEASFQRGVDIGLCADLGTLQRLPKLIGSDSLARELVFTARKFPAAEALKAGFLSTVLDDKQELMDHAVKLGSQIAARSPVAMQGSKVNLNYGRDHTIAQALQHQALWSSVMLQTGDIPAAMMSAQKRK 1021
CS + SN QF LAVT P V QVE+NRP K NAM+ +F+ E+ +CF +A DP CR ++L G+G F+SGLD+ +HA ++M D D +RK+F+ +F+ QE+ I++C KPVI A+H+AC+GGGVD++ A DIRL + DAWF IKE V++GL AD+GTLQRLPK++G+DSL REL +TAR+F A EA G +S V DK +++ A++L S IA++SP+A+QG+KVNL Y RDH++ +AL + A W+ MLQT D+ A+ + ++
Sbjct: 27 CSARKMSSNSLPQFETLAVTSPKEYVYQVELNRPKKLNAMNKAFWREMVECFNGIAQDPNCRIVILTGAGRAFTSGLDVMDHADVLMSM-------DGEDDVSRKAFKFIQFIKKYQETFTVIEKCRKPVIAAIHNACVGGGVDMITACDIRLCTEDAWFQIKE------VELGLAADVGTLQRLPKIVGNDSLVRELAYTARRFQALEAKGCGLVSQVYKDKDTMIEGALELASTIASQSPIAVQGTKVNLIYSRDHSVPEALDYIAAWNMSMLQTEDLMKAIQAGMAKE 304 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig189.65.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig189.65.3 >prot_P-littoralis_Contig189.65.3 ID=prot_P-littoralis_Contig189.65.3|Name=mRNA_P-littoralis_Contig189.65.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=332bp MSMYRVLRRVSRHLSAASRHLLATNRPVTTTGSCSGNESVSNYEQFRDLAback to top mRNA from alignment at P-littoralis_Contig189:310939..316522+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig189.65.3 ID=mRNA_P-littoralis_Contig189.65.3|Name=mRNA_P-littoralis_Contig189.65.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=5584bp|location=Sequence derived from alignment at P-littoralis_Contig189:310939..316522+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig189:310939..316522+ >mRNA_P-littoralis_Contig189.65.3 ID=mRNA_P-littoralis_Contig189.65.3|Name=mRNA_P-littoralis_Contig189.65.3|organism=Pylaiella littoralis U1_48|type=CDS|length=996bp|location=Sequence derived from alignment at P-littoralis_Contig189:310939..316522+ (Pylaiella littoralis U1_48)back to top |