prot_P-littoralis_Contig189.56.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig189.56.1
Unique Nameprot_P-littoralis_Contig189.56.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length104
Homology
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BLAST of mRNA_P-littoralis_Contig189.56.1 vs. uniprot
Match: A0A6H5L2B8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2B8_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 1.530e-6
Identity = 30/58 (51.72%), Postives = 40/58 (68.97%), Query Frame = 0 
Query:   28 VGSSVDSVVAQSSFDDDGATFKETTFGHAVAERLLDPLSWCTVHAVQRCTVKEKLVSH 85
            +GSS D+VV  S+FDD GA+ +ET+   A AE + DP   CTVHAVQ  TV+ +L+ H
Sbjct: 1280 IGSSADTVVVASAFDD-GASLEETSLCRAEAENVFDPPGSCTVHAVQGRTVEGRLIIH 1336
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig189.56.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L2B8_9PHAE1.530e-651.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig189contigP-littoralis_Contig189:240544..240855 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig189.56.1mRNA_P-littoralis_Contig189.56.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig189 240264..240861 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig189.56.1 ID=prot_P-littoralis_Contig189.56.1|Name=mRNA_P-littoralis_Contig189.56.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=104bp
MGVVSAQQCIETSGSQERCTRTTPSTFVGSSVDSVVAQSSFDDDGATFKE
TTFGHAVAERLLDPLSWCTVHAVQRCTVKEKLVSHPSCSALDEIIFPGNR
IIR*
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