prot_P-littoralis_Contig189.49.10 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig189.49.10
Unique Nameprot_P-littoralis_Contig189.49.10
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length224
Homology
BLAST of mRNA_P-littoralis_Contig189.49.10 vs. uniprot
Match: D7FJP9_ECTSI (Rab8D, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJP9_ECTSI)

HSP 1 Score: 399 bits (1025), Expect = 7.380e-140
Identity = 206/224 (91.96%), Postives = 213/224 (95.09%), Query Frame = 0
Query:    1 MNGLGAPA-GGAARPTPLLIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQGREVAREEGEQLAAELGVPYMETSAKDNLNVEETFGNLASRVKTRLEVTQAASDEQSSGETLRLNGSRNGGGGDADSLAQKMESCCT 223
            MNGLGAPA GGA +PTPLLIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQGREVAREEGEQLAAELGVPYMETSAK+NLNVEETFGNLASRVKTRLE +QAA+D   +GETLRLNG RNGG  D +SL Q+MESCCT
Sbjct:    1 MNGLGAPAVGGAGKPTPLLIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQGREVAREEGEQLAAELGVPYMETSAKENLNVEETFGNLASRVKTRLEASQAATDGAGAGETLRLNGGRNGGV-DTESLTQRMESCCT 223          
BLAST of mRNA_P-littoralis_Contig189.49.10 vs. uniprot
Match: A0A835YM14_9STRA (Rab8D, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM14_9STRA)

HSP 1 Score: 247 bits (631), Expect = 5.560e-80
Identity = 126/184 (68.48%), Postives = 150/184 (81.52%), Query Frame = 0
Query:   17 LLIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQGREVAREEGEQLAAELGVPYMETSAKDNLNVEETFGNLASRVKTRLEVTQAASDEQSSGETLRL 200
            LLIR+LMIG+SSVGKTSLVLRYDKRGFN +FTTTIGVDYSDR+L +D R VKLQIWDTAGQERFHSLTTSFFKRAEGF LV+DVS+R+SF++V+ WM DI EQGK  SDVV+ GNKCD++ R VA+ E E+LA    VPY E SAKDN+NV+  F  LAS VK RL+  +AA + + + ET+ L
Sbjct:   22 LLIRVLMIGESSVGKTSLVLRYDKRGFNAKFTTTIGVDYSDRMLTVDARAVKLQIWDTAGQERFHSLTTSFFKRAEGFALVFDVSDRRSFDAVARWMGDIREQGKADSDVVLVGNKCDVKERAVAKGEAEKLAKHFAVPYFEASAKDNVNVDVIFETLASSVKRRLDA-KAADEAKKASETVTL 204          
BLAST of mRNA_P-littoralis_Contig189.49.10 vs. uniprot
Match: A0A836CM00_9STRA (Rab8D, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM00_9STRA)

HSP 1 Score: 236 bits (602), Expect = 6.580e-76
Identity = 114/165 (69.09%), Postives = 137/165 (83.03%), Query Frame = 0
Query:   23 MIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQGREVAREEGEQLAAELGVPYMETSAKDNLNVEETFGNLASRVKTRLEVTQA 187
            MIG+SSVGKTSLVLRYDKRGFN +FTTTIGVDYSDR+L +DG+Q+KLQIWDTAGQERFHSLTTSFFKRAEGFVL +DVS+R SFESV+ WMKDI   GK  SDVV+ GNKCD++ R VA+EE + LAA+  VPY E SAK+++NV+  F  +A+ +K RL+   A
Sbjct:    1 MIGESSVGKTSLVLRYDKRGFNSKFTTTIGVDYSDRMLTIDGKQIKLQIWDTAGQERFHSLTTSFFKRAEGFVLCFDVSDRASFESVARWMKDIEASGKPDSDVVLVGNKCDMKERAVAKEEAQALAAQFRVPYFEASAKEDVNVDAVFSTVANNIKRRLDAKAA 165          
BLAST of mRNA_P-littoralis_Contig189.49.10 vs. uniprot
Match: A0A6V1KKE1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1KKE1_HETAK)

HSP 1 Score: 206 bits (524), Expect = 7.550e-64
Identity = 99/169 (58.58%), Postives = 132/169 (78.11%), Query Frame = 0
Query:   12 ARPTPLLIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQG--REVAREEGEQLAAELGVPYMETSAKDNLNVEETFGNLASRV 178
            ++  P +IRILM+GDSSVGKTSLV+R+D +GF  ++ TTIGVDYSDRL+E+DG + KLQ+WDTAGQERF +LT+SFFKRA+GF L YD+S+R SF++V+ WMKDI EQ   G ++++ GNKCD+    REVA +EG  LA E G P++E SAK + NV++ F  +AS V
Sbjct:    7 SKKQPPIIRILMVGDSSVGKTSLVMRFDDKGFLNKYATTIGVDYSDRLVEVDGDEYKLQVWDTAGQERFRALTSSFFKRADGFCLCYDISSRHSFDNVNRWMKDICEQAPSGFNLILVGNKCDVPEARREVAYQEGVDLAGEFGAPFLEASAKTDRNVDDVFMTVASAV 175          
BLAST of mRNA_P-littoralis_Contig189.49.10 vs. uniprot
Match: A0A7S2AY15_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AY15_9STRA)

HSP 1 Score: 198 bits (503), Expect = 8.070e-61
Identity = 97/166 (58.43%), Postives = 124/166 (74.70%), Query Frame = 0
Query:   18 LIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQG--REVAREEGEQLAAELGVPYMETSAKDNLNVEETFGNLASRVKTR 181
            ++RILMIGDS VGKTSLVLRYD+  F+ +F TTIGVDY D++++++G+ VKLQIWDTAGQERF SLT++FF RA+G VL YDVS+R S+E + TWM +I +      DVVICG+KCD+    R+V  EEG+ LA + GVPY E SAK N NVE  F  LA+ +  R
Sbjct:   18 VVRILMIGDSGVGKTSLVLRYDEDAFSHKFVTTIGVDYRDKVVQVNGKSVKLQIWDTAGQERFRSLTSNFFSRADGMVLAYDVSDRTSYEHIKTWMSEIRKHAPEDVDVVICGSKCDIDATDRKVTEEEGQTLAEDEGVPYFEASAKANTNVEAMFMQLATTIVDR 183          
BLAST of mRNA_P-littoralis_Contig189.49.10 vs. uniprot
Match: A0A7S2SVP5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVP5_9STRA)

HSP 1 Score: 193 bits (491), Expect = 7.270e-59
Identity = 97/173 (56.07%), Postives = 124/173 (71.68%), Query Frame = 0
Query:    8 AGGAARPTPLLIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDL--QGREVAREEGEQLAAELGVPYMETSAKDNLNVEETFGNLASRV 178
            A   A P   ++R+LMIGDS+VGKTSLVLRYD+  F+ +F TTIGVDY D+++++ G  VKLQIWDTAGQERF +LT +FF RA+G VL YDVS R SFE V  W + IVE+      +++CG KCD   + REV++E+GE LA EL +P+ ETSAK N NV E F  LA+ V
Sbjct:    2 AAAMATPKRKVVRLLMIGDSNVGKTSLVLRYDENRFSHKFVTTIGVDYRDKVVDIHGANVKLQIWDTAGQERFRALTANFFSRADGIVLAYDVSKRTSFEGVRRWHEQIVEKAAPEVQMLLCGTKCDCSPEEREVSQEDGESLAKELAIPFFETSAKGNRNVAEAFMTLATAV 174          
BLAST of mRNA_P-littoralis_Contig189.49.10 vs. uniprot
Match: A0A1E7F4E5_9STRA (Ras-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F4E5_9STRA)

HSP 1 Score: 191 bits (485), Expect = 1.490e-57
Identity = 100/196 (51.02%), Postives = 139/196 (70.92%), Query Frame = 0
Query:   18 LIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQG-REVAREEGEQLAAELGVPYMETSAKDNLNVEETFGNLASRVKT-RLEVTQAASDEQSS---GETLRLNGSRNGGG 208
            ++R+LM+GDSS GKTSLVLR+D+  F+ +F TTIGVDY D++++++G  ++LQ+WDTAGQERF SLT++FF RA+GFVL YD+SNR SF+ V  WM+DI  +     D+V+CGNK DL   R V  EEG+QLA E GV + ETSA   +NVE+ F  L++ +K  R++  +A  +  S+   G +    GS NGGG
Sbjct:   22 IVRLLMVGDSSCGKTSLVLRFDQNVFSTKFVTTIGVDYRDKMVKIEGVPMRLQLWDTAGQERFRSLTSNFFGRADGFVLTYDISNRPSFDHVIGWMRDIKTRAPPDCDIVLCGNKSDLDNDRVVTLEEGKQLAEEYGVEFFETSALTGINVEKMFYGLSTTIKRKRIDEFEAGGNGNSASGGGASTAEQGSVNGGG 217          
BLAST of mRNA_P-littoralis_Contig189.49.10 vs. uniprot
Match: A0A6T5R664_9STRA (Hypothetical protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6T5R664_9STRA)

HSP 1 Score: 190 bits (482), Expect = 3.510e-57
Identity = 111/229 (48.47%), Postives = 149/229 (65.07%), Query Frame = 0
Query:   12 ARPTPL--------LIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQG-REVAREEGEQLAAELGVPYMETSAKDNLNVEETFGNLASRVKTR----LEVTQAAS----DEQSSGETLRLNGSRNGGGGDADSLAQKM-ESCC 222
            A P PL        ++R+LM+GDSS GKTSLVLR+D+  F+ +F TTIGVDY D++++++G  ++LQ+WDTAGQERF SLT++FF RA+GFVL YD+SNR SF+ V  WM+DI  +     D+V+CGNK DL+  R V+ +EG+ LA E GV + ETSA    NVE  F  LA+ +K R     E TQAAS    D    G +  +   ++GGGG     AQ   +SCC
Sbjct:   10 AAPRPLQMGAKGAYIVRLLMVGDSSCGKTSLVLRFDQNVFSTKFVTTIGVDYRDKMVKIEGAPMRLQLWDTAGQERFRSLTSNFFGRADGFVLCYDISNRPSFDHVIGWMRDIKTRAPPDCDIVLCGNKSDLEADRVVSVDEGKGLAEEYGVQFFETSALTGSNVESMFTALATTIKRRRIDEYEGTQAASVAGGDRSVGGASQPVILGKDGGGG-----AQAAGKSCC 233          
BLAST of mRNA_P-littoralis_Contig189.49.10 vs. uniprot
Match: A0A2S2Q7E1_9HEMI (Ras-related protein Rab-8A n=12 Tax=Aphididae TaxID=27482 RepID=A0A2S2Q7E1_9HEMI)

HSP 1 Score: 188 bits (478), Expect = 1.040e-56
Identity = 98/220 (44.55%), Postives = 147/220 (66.82%), Query Frame = 0
Query:   12 ARPTPLLIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQ-GREVAREEGEQLAAELGVPYMETSAKDNLNVEETFGNLASRVKTRLEVTQAASDE-----QSSGETLRLNGS--RNGGGGDADSLAQKMESCCT 223
            A+    L ++L+IGDS VGKT ++ R+ +  FN  F +TIG+D+  R +E+DG+++KLQIWDTAGQERF ++TT++++ A G +LVYDV+N +SF+++  W+++I E      + ++ GNKC+L  GR+V++E GEQLA E G+ +METSAK ++NVEE F  LA  +KT+ E    AS+      QSSG  LR N    + G GG + +    + S CT
Sbjct:    2 AKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIEMDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFDNIKNWIRNIEENASADVEKMLLGNKCELSSGRQVSKERGEQLAVEYGIKFMETSAKASVNVEEAFHTLARDIKTKTEKKLEASNPPKGGVQSSGHHLRDNNGPKKLGQGGGSAAALNWLSSRCT 221          
BLAST of mRNA_P-littoralis_Contig189.49.10 vs. uniprot
Match: A0A7S4JU42_9STRA (Hypothetical protein (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JU42_9STRA)

HSP 1 Score: 187 bits (476), Expect = 1.120e-56
Identity = 103/194 (53.09%), Postives = 131/194 (67.53%), Query Frame = 0
Query:    2 NGLGAPA-GGAAR----PTPL--------LIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQG-REVAREEGEQLAAELGVPYMETSAKDNLNVEETFGNLASRVKTR 181
            NG   P  GGAA     P PL        ++R+LM+GDSS GKTSLVLR+D+  F+ +F TTIGVDY D+ + ++G  ++LQ+WDTAGQERF SLT++FF RA+GFVL YDVSNR SF+ V  WM+DI  +     DVV+CGNK DL   R V+ EEG  LA E GV + ETSA    NVE+ F +LA+ +K R
Sbjct:    4 NGSSPPGQGGAAAANPPPRPLQMGAKGAYIVRLLMVGDSSCGKTSLVLRFDQNVFSTKFVTTIGVDYRDKTVRIEGAPLRLQLWDTAGQERFRSLTSNFFGRADGFVLCYDVSNRPSFDHVHGWMRDIRTRAPPDCDVVLCGNKSDLDADRVVSTEEGAALAEECGVRFFETSALTGNNVEDMFMDLATAIKRR 197          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig189.49.10 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJP9_ECTSI7.380e-14091.96Rab8D, RAB family GTPase n=2 Tax=Ectocarpus TaxID=... [more]
A0A835YM14_9STRA5.560e-8068.48Rab8D, rab family GTPase n=1 Tax=Tribonema minus T... [more]
A0A836CM00_9STRA6.580e-7669.09Rab8D, rab family GTPase n=1 Tax=Tribonema minus T... [more]
A0A6V1KKE1_HETAK7.550e-6458.58Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2AY15_9STRA8.070e-6158.43Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S2SVP5_9STRA7.270e-5956.07Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1E7F4E5_9STRA1.490e-5751.02Ras-domain-containing protein n=1 Tax=Fragilariops... [more]
A0A6T5R664_9STRA3.510e-5748.47Hypothetical protein n=2 Tax=Skeletonema marinoi T... [more]
A0A2S2Q7E1_9HEMI1.040e-5644.55Ras-related protein Rab-8A n=12 Tax=Aphididae TaxI... [more]
A0A7S4JU42_9STRA1.120e-5653.09Hypothetical protein (Fragment) n=2 Tax=Odontella ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 122..135
score: 38.92
coord: 156..178
score: 40.65
coord: 60..82
score: 54.09
coord: 42..58
score: 29.26
coord: 19..40
score: 39.13
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 20..181
e-value: 1.7E-34
score: 130.6
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 24..214
e-value: 9.2E-7
score: 38.5
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 19..181
e-value: 1.8E-75
score: 266.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 186..201
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 186..215
NoneNo IPR availablePANTHERPTHR47977LD21953P-RELATEDcoord: 18..215
NoneNo IPR availablePANTHERPTHR47977:SF51RAS AND EF-HAND DOMAIN-CONTAINING PROTEINcoord: 18..215
NoneNo IPR availablePROSITEPS51420RHOcoord: 12..180
score: 11.572058
NoneNo IPR availablePROSITEPS51419RABcoord: 13..222
score: 30.65192
NoneNo IPR availableCDDcd00154Rabcoord: 19..176
e-value: 5.81757E-79
score: 231.961
IPR001806Small GTPaseSMARTSM00174rho_sub_3coord: 21..182
e-value: 1.7E-10
score: 15.2
IPR001806Small GTPasePFAMPF00071Rascoord: 20..179
e-value: 2.0E-55
score: 186.8
IPR001806Small GTPasePROSITEPS51421RAScoord: 13..223
score: 18.66151
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 12..203
e-value: 6.3E-62
score: 210.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 16..182
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 19..174
e-value: 5.4E-27
score: 92.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig189contigP-littoralis_Contig189:228310..235857 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig189.49.10mRNA_P-littoralis_Contig189.49.10Pylaiella littoralis U1_48mRNAP-littoralis_Contig189 225726..238250 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig189.49.10 ID=prot_P-littoralis_Contig189.49.10|Name=mRNA_P-littoralis_Contig189.49.10|organism=Pylaiella littoralis U1_48|type=polypeptide|length=224bp
MNGLGAPAGGAARPTPLLIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTT
IGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDV
SNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQGREVAREEGEQLAA
ELGVPYMETSAKDNLNVEETFGNLASRVKTRLEVTQAASDEQSSGETLRL
NGSRNGGGGDADSLAQKMESCCT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR027417P-loop_NTPase
IPR005225Small_GTP-bd_dom