mRNA_P-littoralis_Contig189.27.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig189.27.1 vs. uniprot
Match: D7G5E6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5E6_ECTSI) HSP 1 Score: 315 bits (807), Expect = 2.430e-102 Identity = 174/244 (71.31%), Postives = 193/244 (79.10%), Query Frame = 3
Query: 78 MSLLTTISVREGEEALEKVPARVEQMQLLLDGKFAYTSLTDVESAFKQLLAGSGGTATENADMTALLSSVRDEVAQTLNILLALKRWIQVQVPKIEDGNNFGVSVQLDVTKGIDGLTAPLATSLGELPGYFESRASAWDKIATKTSKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSSNHLVALDIKWFVSLHHTLLRARDSLVCAADMIEKNMEKLLRPKGTNTQGGGMYSF 809
MS LT ISVREGE AL +P +V +MQ LL+ +FAYTSL D+ES FKQLL SGG+ATENA+M ALLS+VR+EV QT++ILLALKRWI+VQVPKIEDGNNFGVSVQLDV KGID LT P+A+SLGE+PGYFESRASAWDKI K SKES XXXXXXXX DS+NHL+ALD+KWFVSLHHTLLRARDSLV AADMIEKNMEKLLRPKGTNTQGGGMYSF
Sbjct: 1 MSSLTAISVREGEVALANLPEQVGKMQALLEAEFAYTSLADIESGFKQLLTSSGGSATENANMGALLSTVRNEVTQTMSILLALKRWIRVQVPKIEDGNNFGVSVQLDVAKGIDELTTPVASSLGEMPGYFESRASAWDKIGNKKSKESKTSSSASKDTGGKDGDSXXXXXXXXTEEKTSESSFAPDSANHLIALDVKWFVSLHHTLLRARDSLVLAADMIEKNMEKLLRPKGTNTQGGGMYSF 244
BLAST of mRNA_P-littoralis_Contig189.27.1 vs. uniprot
Match: A0A835YYY9_9STRA (Proteasome activator pa28 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYY9_9STRA) HSP 1 Score: 145 bits (365), Expect = 1.100e-36 Identity = 86/233 (36.91%), Postives = 117/233 (50.21%), Query Frame = 3
Query: 78 MSLLTTISVREGEEALEKVPARVEQMQLLLDGKFAYTSLTDVESAFKQLLAGSGGTATENADMTALLSSVRDEVAQTLNILLALKRWIQVQVPKIEDGNNFGVSVQLDVTKGIDGLTAPLATSLGELPGYFESRASAWDKIATKTSKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSSNHLVALDIKWFVSLHHTLLRARDSLVCAADMIEKNMEKLLRPKG 776
M L S EGE A E VP V + L FAYT L+ +ES+F +A +G N + LL +V+ ++A ++NILLAL RWIQV VP IEDGNNFGV VQ +V K I L + +LP Y E RA AW+K+A K + D LV +D++ +V LH ++ ARD+++ ADM+EKN+ K+ PKG
Sbjct: 1 MEALKEQSKSEGEAAREVVPTFVAHLNESLASNFAYTDLSQIESSFTAAVAAAGSVPATNDKLAKLLPAVQSDLATSINILLALYRWIQVHVPIIEDGNNFGVGVQQEVAKLIAESVTKLEAAFDKLPEYHEKRAGAWEKLAAKEDSTAKKSTSKSTVTGGKEGDENKTTVTESNDTSSSTSRQIPDGLRALVTMDVRCYVQLHKSIQLARDTVLFCADMVEKNVTKIKAPKG 233
BLAST of mRNA_P-littoralis_Contig189.27.1 vs. uniprot
Match: H6WB99_VAULI (BED-type domain-containing protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB99_VAULI) HSP 1 Score: 117 bits (293), Expect = 7.860e-26 Identity = 74/225 (32.89%), Postives = 110/225 (48.89%), Query Frame = 3
Query: 108 EGEEALEKVPARVEQMQLLLDGKFAYTSLTDVESAFKQ--LLAGSGGTATENADMTALLSSVRDEVAQTLNILLALKRWIQVQVPKIEDGNNFGVSVQLDVTKGIDGLTAPLATSLGELPGYFESRASAWDKIATKTSKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSSNHLVALDIKWFVSLHHTLLRARDSLVCAADMIEKNMEKLLRPKG 776
EG+ E VP+ ++++ +L F+YT L +E F L S N + +L+S VR ++ +N L +LK WI+ VP IEDGNNFGV VQ +VTK I L + LP Y E R++ W+K+ K+ + DS +VALD+K +V+LH L +RDSL +A+++E N+ KL+ PKG
Sbjct: 89 EGKVIREIVPSLIKELDKILQYDFSYTDLLSIEKTFADDVLANASQNQPQVNEKLCSLISLVRSKMVLAINTLFSLKMWIRAHVPAIEDGNNFGVGVQYEVTKNISESIEKLQAAFNTLPEYHEKRSAVWEKLIGKSETVTKKSTGNEDKSTVTQSTDESNSTGKQLP----------DSLRTIVALDLKCYVNLHSHLQLSRDSLFFSANLVELNIGKLVAPKG 303
BLAST of mRNA_P-littoralis_Contig189.27.1 vs. uniprot
Match: A0A8K1CBJ1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CBJ1_PYTOL) HSP 1 Score: 111 bits (278), Expect = 2.040e-24 Identity = 74/243 (30.45%), Postives = 108/243 (44.44%), Query Frame = 3
Query: 78 MSLLTTISVREGEEALEK-VPARVEQMQLLLDGKFAYTSLTDVESAFKQLLAGSGGTATENADMTALLSSVRDEVAQTLNILLALKRWIQVQVPKIEDGNNFGVSVQLDVTKGIDGLTAPLATSLGELPGYFESRASAWDKIATKTSKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSSNHLVALDIKWFVSLHHTLLRARDSLVCAADMIEKNMEKLLRPKGTNTQGGGMY 803
M + RE E L+ + R+E++Q LL +F ++ DV + + T ++ + AL+ +V + L+ L +WI + VPK+ DGNNFGV VQL V K I T L + LP Y RA+A +K+ K SKE D +VA+D+KWF +L TL RD+ D +EKN +K+LRP+ G GMY
Sbjct: 1 MEAYKELVTREAEALLQSGITQRLEEVQKLLVAEFQSRAIADVRATSTTSMQQQLPTIQQHPQLPALVGAVATHLEHALSDFQKLSQWISLLVPKVADGNNFGVEVQLIVLKEIKDATDKLQKAWDSLPDYHSQRATAIEKLNDKRSKEKTVTTTVTESTGGKEGDEKKSVVSSVDKESSTSAAPVDDWIAQVVAIDVKWFYNLARTLEIVRDAYAIVYDRVEKNKDKILRPRNQERAGYGMY 243
BLAST of mRNA_P-littoralis_Contig189.27.1 vs. uniprot
Match: K3WA13_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WA13_GLOUD) HSP 1 Score: 110 bits (274), Expect = 7.300e-24 Identity = 68/235 (28.94%), Postives = 109/235 (46.38%), Query Frame = 3
Query: 78 MSLLTTISVREGEEALEKVPARVEQMQLLLDGKFAYTSLTDVESAFKQLLAGSGGTATENADMTALLSSVRDEVAQTLNILLALKRWIQVQVPKIEDGNNFGVSVQLDVTKGIDGLTAPLATSLGELPGYFESRASAWDKIATKTSKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSSNHLVALDIKWFVSLHHTLLRARDSLVCAADMIEKNMEKLLRPKGTN 782
M T ++ + +E++P R+ + L+ F + + V + KQ + + G +A + AL++ V DE+ Q L +L L +WIQ+ VPKI DGNNFGV VQ + A L Y+ RA+A +K+ K +KES D +++VA+D+KW+ +L TL RD AD+IEKN +K++ P+G +
Sbjct: 1 MDAYRTSVAQDAHKRIEELPQRLAHVHALVQQHFQARTPSAVRATLKQSVTATRGKVDASATLDALIAVVGDEIEQVLTVLAQLSQWIQLLVPKIADGNNFGVEVQKLAYVHVKESIATWQKQWDALADYYNQRATAVEKVNDKIAKESSKSTTVTATTGGKDGDENKSVTTSLDKETATSGTVVDDWVSYIVAVDLKWYFNLARTLEAIRDQYAVTADIIEKNKDKIVLPRGNS 235
BLAST of mRNA_P-littoralis_Contig189.27.1 vs. uniprot
Match: A0A6A3F8F5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3F8F5_9STRA) HSP 1 Score: 108 bits (271), Expect = 1.890e-23 Identity = 83/228 (36.40%), Postives = 117/228 (51.32%), Query Frame = 3
Query: 111 GEEALEKVPARVEQMQLLLDGKFAYTSLTDVESAFKQLLAGSGGTATENADMTALLSSVRDEVAQTLNILLALKRWIQVQVPKIEDGNNFGVSVQLDVTKGIDGLTAPLATSLGELPGYFESRASAWDKIATKTSKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSSNHLVALDIKWFVSLHHTLLRARDSLVCAADMIEKNMEKLLRPKGTNTQGG 794
G L ++P RV +Q L+ A S + V + F Q + + N ++ +LL+ V DEVAQ L+++ L+ WIQ+QVPK+EDGNNFGV VQ + + L Y +RASA +K+ K S E+XXXXXXXXXXXXX D+ +V LD+KW+ +L L RD +D+I KN EK+ P+G N + G
Sbjct: 12 GAALLSELPQRVAHVQALVQQHAAERSASAVRAKFAQAVLAAPSAVGSNGNVQSLLAVVGDEVAQLLSVIAQLQLWIQLQVPKVEDGNNFGVEVQKYAFVQLKEALDKWQKTWDSLADYSSARASAVEKLNAKASSETXXXXXXXXXXXXXDGDEEKSVTAKVDKQSNNGSNAAEDAVAAVVELDVKWYFNLVRALEGVRDQYAVTSDLISKNKEKIELPRGKNDRAG 239
BLAST of mRNA_P-littoralis_Contig189.27.1 vs. uniprot
Match: A0A662Y6D6_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y6D6_9STRA) HSP 1 Score: 106 bits (265), Expect = 1.270e-22 Identity = 80/228 (35.09%), Postives = 112/228 (49.12%), Query Frame = 3
Query: 111 GEEALEKVPARVEQMQLLLDGKFAYTSLTDVESAFKQLLAGSGGTATENADMTALLSSVRDEVAQTLNILLALKRWIQVQVPKIEDGNNFGVSVQLDVTKGIDGLTAPLATSLGELPGYFESRASAWDKIATKTSKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSSNHLVALDIKWFVSLHHTLLRARDSLVCAADMIEKNMEKLLRPKGTNTQGG 794
G+ L ++P RV Q+Q LL A S + V +AF Q + + N + LL++ D+VA ++ L L+ WIQ+QVPK+EDGNNFGV VQ + + L Y SRA+A +K+ K S ESXXXXXXXXX D+ +V LD+KW+ +L L RD AD+I KN +K+ P+G N + G
Sbjct: 12 GDALLLELPQRVAQVQTLLQQHAAERSPSRVRAAFAQQVLATPTAVGANGQVQGLLATTSDQVALVMDALQLLQLWIQLQVPKVEDGNNFGVEVQKYAFTQLKEALEKWQKAWDALADYSSSRATAAEKLNAKLSSESXXXXXXXXXTGGKDGDEQKSVTAKVDKQGSTGAQAGEDALAAVVELDVKWYFNLVRALEGVRDQYAVTADVIAKNKDKISLPRGNNDRAG 239
BLAST of mRNA_P-littoralis_Contig189.27.1 vs. uniprot
Match: A0A5D6XIL9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XIL9_9STRA) HSP 1 Score: 105 bits (263), Expect = 2.390e-22 Identity = 68/225 (30.22%), Postives = 99/225 (44.00%), Query Frame = 3
Query: 108 EGEEALEKVPARVEQMQLLLDGKFAYTSLTDVESAFKQLLAGSGGTATENADMTALLSSVRDEVAQTLNILLALKRWIQVQVPKIEDGNNFGVSVQLDVTKGIDGLTAPLATSLGELPGYFESRASAWDKIATKTSKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSSNHLVALDIKWFVSLHHTLLRARDSLVCAADMIEKNMEKLLRPKGTN 782
+ E L + P RVE +Q L+ FA + V + A S G NA + AL + V DE+ L L L RW+Q+ VPK+ DGNNFGV VQ + + A L Y RA+A +K+ K +KE D + +VA+D+KW+ +L TL RD D++EKN +K+L P+G++
Sbjct: 11 DAERTLAEFPRRVEHVQALVTQHFAQRQPSAVRATLAAAAAASSGQVRGNASLAALAAVVADEIELVLAALAQLSRWLQLLVPKVADGNNFGVEVQKLALEHLKESAAGWQKHWDALAEYHSQRAAAAEKLNDKVAKEKATSATTTATTGGKDADETKTVTMTSEKETATTAAPVEDWAAFVVAVDVKWYFNLARTLEAVRDQYAVTFDIVEKNRDKILLPRGSS 235
BLAST of mRNA_P-littoralis_Contig189.27.1 vs. uniprot
Match: D0MSD0_PHYIT (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=D0MSD0_PHYIT) HSP 1 Score: 105 bits (261), Expect = 4.490e-22 Identity = 74/228 (32.46%), Postives = 110/228 (48.25%), Query Frame = 3
Query: 111 GEEALEKVPARVEQMQLLLDGKFAYTSLTDVESAFKQLLAGSGGTATENADMTALLSSVRDEVAQTLNILLALKRWIQVQVPKIEDGNNFGVSVQLDVTKGIDGLTAPLATSLGELPGYFESRASAWDKIATKTSKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSSNHLVALDIKWFVSLHHTLLRARDSLVCAADMIEKNMEKLLRPKGTNTQGG 794
G L ++P RV Q+Q LL+ + + + + F Q + + + N ++ ALL+ V DEVAQ ++ + L+ WIQVQVPK+EDGNNFGV VQ + + + Y +RA+A +K+ K S E+ XXXXXX D+ +V +DIKW+ +L L RD D+I KN EK+ P+G N + G
Sbjct: 12 GAALLSELPQRVAQVQALLEQHAGERTPSKLRTKFAQAVLAAPAAVSSNGEVQALLTVVGDEVAQLISTIQQLQVWIQVQVPKVEDGNNFGVEVQKYAFVHLKEALERWQKTWDSMADYSSARATAVEKLNAKASSETSXXXXXXSSKGGKDGDEEKSVTAKVEKQSNAGTKAPEDAIAAVVEIDIKWYFNLARALEGVRDQYAVTEDVIFKNKEKIELPRGKNDRAG 239
BLAST of mRNA_P-littoralis_Contig189.27.1 vs. uniprot
Match: A0A8J5MHS4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5MHS4_9STRA) HSP 1 Score: 106 bits (264), Expect = 1.370e-20 Identity = 80/255 (31.37%), Postives = 121/255 (47.45%), Query Frame = 3
Query: 30 ASQPPLFLQSEAKRTAMSLLTTISVREGEEALEKVPARVEQMQLLLDGKFAYTSLTDVESAFKQLLAGSGGTATENADMTALLSSVRDEVAQTLNILLALKRWIQVQVPKIEDGNNFGVSVQLDVTKGIDGLTAPLATSLGELPGYFESRASAWDKIATKTSKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSSNHLVALDIKWFVSLHHTLLRARDSLVCAADMIEKNMEKLLRPKGTNTQGG 794
A++P LF+ SE K+T + G L ++P RV Q+ L++ + + + + F Q + + + N D+ ALL V DEVAQ ++ + L+ WIQ+QVPK+EDGNNFGV VQ + + L Y +RA+A +K+ K S E+ XXXXXX D+ +V +D+KW+ +L L RD D+I KN EK+ P+G N + G
Sbjct: 593 ATRPTLFM-SEYKKTVTA--------SGAALLSELPQRVAQVHALVEQHAGERAPSKLRAKFAQSVLAAPAAVSSNGDVQALLMVVGDEVAQLMSAIQQLQLWIQLQVPKVEDGNNFGVEVQKYAYVHLKEALEKWQKTWDSLVDYSSARATAVEKLNAKASSETSXXXXXXSSKGGKDGDEEKSVTAKVEKQSNAGNKAPEDAIAAVVEIDVKWYFNLVRALEGVRDQYAVTEDVITKNKEKIELPRGKNDRAG 838 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig189.27.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig189.27.1 >prot_P-littoralis_Contig189.27.1 ID=prot_P-littoralis_Contig189.27.1|Name=mRNA_P-littoralis_Contig189.27.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=245bp MSLLTTISVREGEEALEKVPARVEQMQLLLDGKFAYTSLTDVESAFKQLLback to top mRNA from alignment at P-littoralis_Contig189:155594..160992- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig189.27.1 ID=mRNA_P-littoralis_Contig189.27.1|Name=mRNA_P-littoralis_Contig189.27.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5399bp|location=Sequence derived from alignment at P-littoralis_Contig189:155594..160992- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig189:155594..160992- >mRNA_P-littoralis_Contig189.27.1 ID=mRNA_P-littoralis_Contig189.27.1|Name=mRNA_P-littoralis_Contig189.27.1|organism=Pylaiella littoralis U1_48|type=CDS|length=735bp|location=Sequence derived from alignment at P-littoralis_Contig189:155594..160992- (Pylaiella littoralis U1_48)back to top |