mRNA_P-littoralis_Contig188.92.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig188.92.1 vs. uniprot
Match: A0A6H5J5V5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5V5_9PHAE) HSP 1 Score: 228 bits (580), Expect = 3.050e-72 Identity = 108/150 (72.00%), Postives = 125/150 (83.33%), Query Frame = 1
Query: 133 MQPREFRKLYKMLRGRLQYNSVRGKGHNGTVAGEWALAGTLQWLAGHGVSAAADGPNMANSTAYAKIKDGIDAINSCGRLRIKWPRTDEELRENSSVFRARSSQLDPVLKHCVGALDGVLIRRTKPSIKEHPCPDRFFSGHKMAVGMNYQ 582
M P+EF+ LY+MLRGRL+ + G+GHNGT+AGEWALA TL+WLAGHGVSAAADGP+MA STA+AKIK G+DAIN GRLRIKWPR + EL+ + F AR SQLDPVLK CVGAL+G+L+RR KPSI EHP P RFFSGHKM VGMNYQ
Sbjct: 1 MSPKEFKGLYEMLRGRLECHGPEGRGHNGTIAGEWALASTLRWLAGHGVSAAADGPHMATSTAFAKIKKGLDAINDYGRLRIKWPRKERELQAKAQRFAARRSQLDPVLKRCVGALNGLLVRRKKPSITEHPYPHRFFSGHKMTVGMNYQ 150
BLAST of mRNA_P-littoralis_Contig188.92.1 vs. uniprot
Match: A0A6H5K3F2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3F2_9PHAE) HSP 1 Score: 235 bits (600), Expect = 1.050e-71 Identity = 122/271 (45.02%), Postives = 174/271 (64.21%), Query Frame = 1
Query: 43 RGACVERSRQEWKDVIRPLVEDGSFKTRFRMQPREFRKLYKMLRGRLQYNSVRGKGHNGTVAGEWALAGTLQWLAGHGVSAAADGPNMANSTAYAKIKDGIDAINSCGRLRIKWPRTDEELRENSSVFRARSSQLDPVLKHCVGALDGVLIRRTKPSIKEHPCPDRFFSGHKMAVGMNYQVICDARYTVIAACCNTPGSTNDRLAYREANFDTLVESLPGKYYVLGDAAYGATNKMIVPYPGCNLDAATDAFNFFQSQGRTCIEQTFGIMV 855
R V R R+ W +P+V+DG+F+ RFRM EF L MLR +L+ N G NG + E+ LA L++LAG V DG +A STAYA + IDAIN L WP ++ L + ++R RS+ + V++ CVGA+DG+ +R T+PS++ H P F+SGHK GMN+Q +C+ARY +IA N PGS NDR A++ + F T++++LP Y++GDAAY A+++++VPYPG +L + DA+NF+QSQ R IEQ FGIMV
Sbjct: 42 RDKFVRRERRSWYTYAKPMVQDGTFRLRFRMDYTEFALLADMLRPKLERNERMGALRNGVIPVEFQLAMALRFLAGGSVFEVMDGNVIARSTAYAIVHRVIDAINQTRELDCVWPEGEDAL-DQCGMYRRRST--NGVIRMCVGAMDGLFVRMTQPSLRRHVNPRSFYSGHKKGFGMNFQGVCNARYEIIAWTMNCPGSCNDRTAFKHSVFGTVLKTLPPGAYIVGDAAYPASDQVLVPYPGTSLTRSQDAYNFYQSQARISIEQAFGIMV 309
BLAST of mRNA_P-littoralis_Contig188.92.1 vs. uniprot
Match: A0A6H5K6M2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M2_9PHAE) HSP 1 Score: 226 bits (577), Expect = 3.490e-68 Identity = 119/271 (43.91%), Postives = 168/271 (61.99%), Query Frame = 1
Query: 43 RGACVERSRQEWKDVIRPLVEDGSFKTRFRMQPREFRKLYKMLRGRLQYNSVRGKGHNGTVAGEWALAGTLQWLAGHGVSAAADGPNMANSTAYAKIKDGIDAINSCGRLRIKWPRTDEELRENSSVFRARSSQLDPVLKHCVGALDGVLIRRTKPSIKEHPCPDRFFSGHKMAVGMNYQVICDARYTVIAACCNTPGSTNDRLAYREANFDTLVESLPGKYYVLGDAAYGATNKMIVPYPGCNLDAATDAFNFFQSQGRTCIEQTFGIMV 855
RG V R R+ + +RP+VED +F+ RFRM +F L +LR +LQ + G NG + E+ LA TL++LAG V D +A STAYA + IDAIN +L KWP D+ + ++R RS+ + V++ CVGA+DG+ +R P +K H P F+SGHK A GMN+Q IC+A Y +I N PGS NDR A++ + FD L+ +P +++GDAAY A+N+++VP PG L + DA+NF+QSQ R IEQ FGI+V
Sbjct: 46 RGNFVYRERRSFYTYVRPMVEDNTFRKRFRMDYTDFMTLADILRPKLQRDEKMGALRNGAIPVEFQLAMTLRFLAGGSVFEVMDSNVIAKSTAYAIVHRVIDAINQTRQLNCKWPYGDDA-EAQAELYRRRST--NGVIRRCVGAMDGLFVRLIPPCLKRHAVPGSFYSGHKKAFGMNFQGICNASYEIITWTMNCPGSQNDRTAFKHSGFDALLSKMPPDCFIVGDAAYPASNRVLVPDPGTALTLSQDAYNFYQSQARISIEQAFGILV 313
BLAST of mRNA_P-littoralis_Contig188.92.1 vs. uniprot
Match: A0A6H5L6B6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B6_9PHAE) HSP 1 Score: 199 bits (507), Expect = 7.740e-58 Identity = 103/229 (44.98%), Postives = 145/229 (63.32%), Query Frame = 1
Query: 169 LRGRLQYNSVRGKGHNGTVAGEWALAGTLQWLAGHGVSAAADGPNMANSTAYAKIKDGIDAINSCGRLRIKWPRTDEELRENSSVFRARSSQLDPVLKHCVGALDGVLIRRTKPSIKEHPCPDRFFSGHKMAVGMNYQVICDARYTVIAACCNTPGSTNDRLAYREANFDTLVESLPGKYYVLGDAAYGATNKMIVPYPGCNLDAATDAFNFFQSQGRTCIEQTFGIMV 855
LR LQ N G NG + E +A TL+WLAG + DG +A STAY I+A+N+C L KWP ++ R + +FR RSS V++ CVGA DG+ +R KPS KE P+ +++GHK GMN+Q +CDA+Y ++A N PGS NDR A+ + FD L+ LP ++V+GDAAYGA+ +++VP+PG +L A+ DA N++ SQ R IEQT+GI+V
Sbjct: 77 LRPALQKNQQMGLLRNGAIPVEDQVAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEGEDAARA-AELFRNRSSM--DVVRKCVGATDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQAVCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILV 302
BLAST of mRNA_P-littoralis_Contig188.92.1 vs. uniprot
Match: A0A6H5JJA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA1_9PHAE) HSP 1 Score: 169 bits (427), Expect = 3.310e-46 Identity = 102/271 (37.64%), Postives = 150/271 (55.35%), Query Frame = 1
Query: 43 RGACVERSRQEWKDVIRPLVEDGSFKTRFRMQPREFRKLYKMLRGRLQYNSVRGKGHNGTVAGEWALAGTLQWLAGHGVSAAADGPNMANSTAYAKIKDGIDAINSCGRLRIKWPRTDEELRENSSVFRARSSQLDPVLKHCVGALDGVLIRRTKPSIKEHPCPDRFFSGHKMAVGMNYQVICDARYTVIAACCNTPGSTNDRLAYREANFDTLVESLPGKYYVLGDAAYGATNKMIVPYPGCNLDAATDAFNFFQSQGRTCIEQTFGIMV 855
R V R R+ ++ I+P+++D +F RFRM+ +FR L LR LQ N G NG + E+ +A TL+WLAG + DG +A STAY I+A+N+C L KWP E+L E S F A ++ +D V++ CVGA+DG+ +R KPS KE P+ +++GHK GMN+QV S NDR A+ + FD L+ LP ++V+G+AAYGA+ +++VP+PG + EQT+GI+V
Sbjct: 46 RSTLVARERRPFETYIKPMLQDHTFSMRFRMEYDDFRVLVDHLRPALQQNEKTGLLRNGAIPVEYQVAMTLRWLAGGSIYEYMDGHVIARSTAYHVTSTVINALNACPELNCKWPE-GEDLPEPPS-FSATAALMD-VVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQVC----------------SQNDRTAFNFSGFDKLLAGLPEGHFVVGNAAYGASERVVVPFPGTSPPX----------------EQTYGILV 281
BLAST of mRNA_P-littoralis_Contig188.92.1 vs. uniprot
Match: A0A6H5J641_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J641_9PHAE) HSP 1 Score: 153 bits (386), Expect = 2.800e-42 Identity = 72/92 (78.26%), Postives = 77/92 (83.70%), Query Frame = 1
Query: 580 QVICDARYTVIAACCNTPGSTNDRLAYREANFDTLVESLPGKYYVLGDAAYGATNKMIVPYPGCNLDAATDAFNFFQSQGRTCIEQTFGIMV 855
QVICDA Y V AACCNTPGSTN R AY+EA FD LVE LPG Y V+GD AYGAT+KM+VPYPGC+LDA AFNFFQSQGR CIEQTFGIMV
Sbjct: 3 QVICDADYIVTAACCNTPGSTNVRQAYKEAEFDQLVEGLPGNYDVVGDTAYGATDKMLVPYPGCDLDADQQAFNFFQSQGRMCIEQTFGIMV 94
BLAST of mRNA_P-littoralis_Contig188.92.1 vs. uniprot
Match: A0A6H5KV00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV00_9PHAE) HSP 1 Score: 148 bits (374), Expect = 1.010e-41 Identity = 68/91 (74.73%), Postives = 80/91 (87.91%), Query Frame = 1
Query: 133 MQPREFRKLYKMLRGRLQYNSVRGKGHNGTVAGEWALAGTLQWLAGHGVSAAADGPNMANSTAYAKIKDGIDAINSCGRLRIKWPRTDEEL 405
M P+EF+ LY+MLRGRL+ + G+GHNGT+AGEWALA TL+WLAGHGVSAAADGP+MA STA+AKIK G+DAIN CGRLRIKWPRT+ EL
Sbjct: 1 MSPKEFKGLYEMLRGRLECHGPEGRGHNGTIAGEWALASTLRWLAGHGVSAAADGPHMATSTAFAKIKKGLDAINDCGRLRIKWPRTEREL 91
BLAST of mRNA_P-littoralis_Contig188.92.1 vs. uniprot
Match: A0A6H5KNF2_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNF2_9PHAE) HSP 1 Score: 148 bits (374), Expect = 9.510e-40 Identity = 69/144 (47.92%), Postives = 103/144 (71.53%), Query Frame = 1
Query: 424 FRARSSQLDPVLKHCVGALDGVLIRRTKPSIKEHPCPDRFFSGHKMAVGMNYQVICDARYTVIAACCNTPGSTNDRLAYREANFDTLVESLPGKYYVLGDAAYGATNKMIVPYPGCNLDAATDAFNFFQSQGRTCIEQTFGIMV 855
F A ++ +D V++ CVGA+DG+ +R KPS KE P+ +++GHK GMN+Q +CDA+Y ++A + PGS NDR A+ A FD L+ LP ++V+GDAAYGA+ +++VP+PG +L A+ DA N++ SQ R IEQT+GI+V
Sbjct: 8 FSATAALVD-VVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKNGFGMNFQAVCDAQYRIVAWTMSCPGSQNDRTAFNFAWFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILV 150
BLAST of mRNA_P-littoralis_Contig188.92.1 vs. uniprot
Match: A0A6H5JEM6_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEM6_9PHAE) HSP 1 Score: 130 bits (327), Expect = 6.840e-33 Identity = 84/245 (34.29%), Postives = 129/245 (52.65%), Query Frame = 1
Query: 133 MQPREFRKLYKMLRGRLQYNSVRG---KGHNGTVAGEWALAGTLQWLAGHGVSAAADGPNMANSTAYAKIKDGIDAINSCGRL-RIKWPRTDEELRENSSVFRARSSQLDPVLKHCVGALDGVLIRRTKPSIKEHPCPDRFFSGHKMAVGMNYQVICDARYTVIAACCNTPGSTNDRLAYREANFDTLVESLPGKYYVLGDAAYGATNKMIVPYPGCNLDAATDAFNFFQSQGRTCIEQTFGIMV 855
M+ F KL ++LR L+ N+ G NG ++ E +A L+ LAG ++ + Y + + IDAIN+ + +P T+E N++ F+ +S+ D + V A+DG+ I+ P KE ++ G K A G+N Q +C A Y A +PGSTND +A+ ++ V LP ++++GDAAY K++ PYPG L A D+FNF SQ R IEQ+FGI+V
Sbjct: 1 MEKGSFHKLVELLRPSLEVNAFFGALRSPRNGAISVEVRVAVALRILAGASYWDVLVMFGLSVAVTYQILWEVIDAINNTPAVGAFDFPLTEEGCMRNANRFKDKST--DGIFSWVVAAVDGLFIKAEAPRAKETKNVIAYYPGSKSAYGINVQAMCTADYRFCAMSAISPGSTNDWVAWTRSSLAKAVARLPAGFHIIGDAAYPIGEKLLTPYPGRQLPAGEDSFNFHLSQLRVKIEQSFGILV 243
BLAST of mRNA_P-littoralis_Contig188.92.1 vs. uniprot
Match: A0A6H5KNZ9_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNZ9_9PHAE) HSP 1 Score: 129 bits (323), Expect = 1.040e-30 Identity = 87/271 (32.10%), Postives = 138/271 (50.92%), Query Frame = 1
Query: 58 ERSRQEWKDVIRPLVEDGSFKTRFRMQPREFRKLYKMLRGRLQ----YNSVRGKGHNGTVAGEWALAGTLQWLAGHGVSAAADGPNMANSTAYAKIKDGIDAINSCGRLR-IKWPRTDEELRENSSVFRARSSQLDPVLKHCVGALDGVLIRRTKPSIKEHPCPDRFFSGHKMAVGMNYQVICDARYTVIAACCNTPGSTNDRLAYREANFDTLVESLPGKYYVLGDAAYGATNKMIVPYPGCNLDAATDAFNFFQSQGRTCIEQTFGIMV 855
E R W L + ++ +R++ F KL ++LR L+ + ++R NG +A E +A L LA ++ + Y + + IDAIN+ + +P T++ N++ F+ +S+ D + V A+DG+ I+ P KE ++SG K A G+N Q +C A Y A +PGSTND +A+ ++ V LP ++++GDAAY K++ PYPG L A D+FNF SQ R IEQ+FGI+V
Sbjct: 76 EPKRLPWAQHEADLDKRRGWRRSYRLEKGSFHKLVELLRPSLEVIAFFGALRSP-RNGAIAVEVRVAVALTILADASYWDVLLMFGLSVAVTYLVLWEVIDAINNTPAVGPFAFPLTEKGCMRNANRFKDKST--DGIFSWVVAAVDGLFIKAEAPRAKETKNVIAYYSGSKSAYGINVQAMCTADYRFCAMSAISPGSTNDWVAWNRSSLAKAVARLPTGFHIIGDAAYPIGEKLLTPYPGRQLPAGEDSFNFHLSQLRVKIEQSFGILV 343 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig188.92.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig188.92.1 >prot_P-littoralis_Contig188.92.1 ID=prot_P-littoralis_Contig188.92.1|Name=mRNA_P-littoralis_Contig188.92.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=285bp MTTVAAAFLVANPGRGACVERSRQEWKDVIRPLVEDGSFKTRFRMQPREFback to top mRNA from alignment at P-littoralis_Contig188:432752..434396+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig188.92.1 ID=mRNA_P-littoralis_Contig188.92.1|Name=mRNA_P-littoralis_Contig188.92.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1645bp|location=Sequence derived from alignment at P-littoralis_Contig188:432752..434396+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig188:432752..434396+ >mRNA_P-littoralis_Contig188.92.1 ID=mRNA_P-littoralis_Contig188.92.1|Name=mRNA_P-littoralis_Contig188.92.1|organism=Pylaiella littoralis U1_48|type=CDS|length=855bp|location=Sequence derived from alignment at P-littoralis_Contig188:432752..434396+ (Pylaiella littoralis U1_48)back to top |