prot_P-littoralis_Contig188.12.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig188.12.1
Unique Nameprot_P-littoralis_Contig188.12.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length393
Homology
BLAST of mRNA_P-littoralis_Contig188.12.1 vs. uniprot
Match: A0A6H5JMF4_9PHAE (Vps8 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMF4_9PHAE)

HSP 1 Score: 226 bits (576), Expect = 5.470e-62
Identity = 190/298 (63.76%), Postives = 203/298 (68.12%), Query Frame = 0
Query:    9 AQGAGAGTAGELPQTAAVMGGVLDALLQRTLSSMAGYVPLPAIVKKVVSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTATSLLFDSLRTVVLERHTLKGKGVRVSAVAGVHLHPPLRLVSGNTGNSSASSNXXXXXXAISSGALEASAATLAASYSADGAGTLAXXXXXXXXXXTPAPPVPAGLVDAVGSSGVISVSPSGLAVVEHLGRRGSSARQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ------------------DAPVSLWRLRAARRRRQARGNKMRALVGWSAGQ 288
            A G G   AGELPQTAAVMGGVLDALLQRTLSSMAGYVPLPAIVKKVVSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTA SLLF+SLRTVV ERHTLKG GVRVSAV G  LHPP   ++           XXXXXX            +LA  +                      PPVP+GL+ A+GS GVI VS +G+AVVEHLGR G      XXXXXXXXXXXXXXXXXXXXXXXXXXXX                   DA  SLWRLRAARRRRQARG+KMR+L  WSAG+
Sbjct: 2221 APGRGREAAGELPQTAAVMGGVLDALLQRTLSSMAGYVPLPAIVKKVVSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTAASLLFESLRTVVRERHTLKGAGVRVSAVGGFDLHPP--RIAAXXXXXXXXXXXXXXXXXXXXXXXXXXXRSLAPHH----------------------PPVPSGLLGALGS-GVIRVSSAGVAVVEHLGRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDASASLWRLRAARRRRQARGDKMRSLARWSAGE 2493          
BLAST of mRNA_P-littoralis_Contig188.12.1 vs. uniprot
Match: D8LRX1_ECTSI (Vps8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRX1_ECTSI)

HSP 1 Score: 211 bits (537), Expect = 3.360e-61
Identity = 180/273 (65.93%), Postives = 191/273 (69.96%), Query Frame = 0
Query:   27 MGGVLDALLQRTLSSMAGYVPLPAIVKKVVSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTATSLLFDSLRTVVLERHTLKGKGVRVSAVAGVHLHPP-LRLVSGNTGNSSASSNXXXXXXAISSGALEASAATLAASYSADGAGTLAXXXXXXXXXXTPAPPVPAGLVDAVGSSGVISVSPSGLAVVEHLGR----------RGSSARQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDAPVSLWRLRAARRRRQARGNKMRALVGWSAGQ 288
            MGGVLDALLQRTLSSMAGYVPLPAIVKKVVSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTA SLLF+SLRTVV ERHTLKG GVRVSAV G  LHPP +    G T   +AS+ XXXXXX                           XX           PPVP+GL+ AVGS GVISVS  G+AVVEHLGR                  XXXXXXXXXXXXXXXXXXXXXXXXXXXX  A  SLWRLRAARRRRQA+G+KMR+L  WSAG+
Sbjct:    1 MGGVLDALLQRTLSSMAGYVPLPAIVKKVVSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTAASLLFESLRTVVRERHTLKGAGVRVSAVGGFDLHPPRIAAADGPTRTRNASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLALHH-----PPVPSGLLGAVGS-GVISVSSGGVAVVEHLGRGXXXXXXXXXXNDEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASASLWRLRAARRRRQAKGDKMRSLARWSAGE 267          
BLAST of mRNA_P-littoralis_Contig188.12.1 vs. uniprot
Match: A0A7S2GX04_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GX04_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 1.250e-18
Identity = 47/103 (45.63%), Postives = 67/103 (65.05%), Query Frame = 0
Query:   19 ELPQTAAVMGGVLDALLQRTLSSMAGYVPLPAIVKKVVSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTATSLLFDSLRTVVLERHTLKGKGVRVSAVAGVHL 121
            ELPQ   ++  VL  ++QRTL  M+ +VPLP IV+K+  DH+G  LGE R ++L+MLDTY+Y+T I+RTA SL+   LR +   R  LK  GV +  +   H+
Sbjct:  415 ELPQHQTILEAVLTEMIQRTLDKMSAFVPLPRIVRKITDDHSGMELGELRDILLSMLDTYTYETNIYRTAVSLVATDLRRLCKRRQRLKCSGVSIRHIEPAHI 517          
BLAST of mRNA_P-littoralis_Contig188.12.1 vs. uniprot
Match: A0A836CF74_9STRA (Golgi CORVET complex core vacuolar protein 8-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF74_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 1.120e-12
Identity = 46/92 (50.00%), Postives = 56/92 (60.87%), Query Frame = 0
Query:   32 DALLQRTLSSMAGYVPLPAIVKKVVSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTATSLLFDSLRTVVLERHTLKGKGVRVSAVAGVHLHP 123
            D LLQR L  M GYVPLPAIV KV+SDHA + LGEF+ +I +ML   S +T ++R A  LLF   +     R  L   GVRV A+ G  L P
Sbjct: 1073 DILLQRLLEGMTGYVPLPAIVGKVLSDHAQAPLGEFKGLIQSMLVACSRETDVYRAAAVLLFGCAQRARAARRRLARAGVRVCAIDGRGLDP 1164          
BLAST of mRNA_P-littoralis_Contig188.12.1 vs. uniprot
Match: A0A443PFM0_9MAGN (Vacuolar protein sorting-associated protein 8 isoform X2 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443PFM0_9MAGN)

HSP 1 Score: 59.3 bits (142), Expect = 9.690e-6
Identity = 28/65 (43.08%), Postives = 39/65 (60.00%), Query Frame = 0
Query:   30 VLDALLQRTLSSMAGYVPLPAIVKKVVSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTATSLLFD 94
            +L   +Q  +  M GYVPLP I+ K++SD+     G+F+  IL ML TY Y+  I  TA SL+ D
Sbjct: 1723 LLSRFIQEIVEGMVGYVPLPTIMAKLLSDNGNQEFGDFKLTILGMLGTYGYERTILDTAKSLIED 1787          
BLAST of mRNA_P-littoralis_Contig188.12.1 vs. uniprot
Match: A0A388JYZ1_CHABU (Vps8 domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JYZ1_CHABU)

HSP 1 Score: 59.3 bits (142), Expect = 1.010e-5
Identity = 25/62 (40.32%), Postives = 40/62 (64.52%), Query Frame = 0
Query:   30 VLDALLQRTLSSMAGYVPLPAIVKKVVSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTATSL 91
            +L  ++ + +S M GYVPLP ++ K+VS H     GEF+  IL +L TY ++ +I +TA +L
Sbjct: 2721 LLVGMMGKVMSGMVGYVPLPVLLSKIVSQHGSDQFGEFKATILGLLGTYGFERSILKTAKNL 2782          
BLAST of mRNA_P-littoralis_Contig188.12.1 vs. uniprot
Match: A0A2I0AWR9_9ASPA (RING-type domain-containing protein n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0AWR9_9ASPA)

HSP 1 Score: 58.5 bits (140), Expect = 1.690e-5
Identity = 28/75 (37.33%), Postives = 45/75 (60.00%), Query Frame = 0
Query:   20 LPQTAAVMGGVLDALLQRTLSSMAGYVPLPAIVKKVVSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTATSLLFD 94
            L  +A ++  +   L+   +  M GY+PLPA++ K++SD+     G+F+  IL ML TY+Y+  I  TA SL+ D
Sbjct: 1690 LKSSAHILRRLFSQLIGEIIEGMTGYLPLPAVMAKLLSDNGNQEFGDFKFTILKMLGTYNYERRILDTAKSLIED 1764          
BLAST of mRNA_P-littoralis_Contig188.12.1 vs. uniprot
Match: A0A1D1XH83_9ARAE (Vacuolar protein sorting-associated protein 8 (Fragment) n=2 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1XH83_9ARAE)

HSP 1 Score: 57.8 bits (138), Expect = 2.960e-5
Identity = 27/76 (35.53%), Postives = 45/76 (59.21%), Query Frame = 0
Query:   19 ELPQTAAVMGGVLDALLQRTLSSMAGYVPLPAIVKKVVSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTATSLLFD 94
            EL + + ++  +    ++  +  M GYVPLPAI+ K+++D+ G   G F+  +L +L TY Y+  I  TA SL+ D
Sbjct: 1660 ELNRGSNILRYIFSQFIKEVVEGMVGYVPLPAIMGKLLADNGGQEFGNFKFTLLGLLGTYGYERRILGTAKSLIED 1735          
BLAST of mRNA_P-littoralis_Contig188.12.1 vs. uniprot
Match: A0A843VW62_COLES (RING-type domain-containing protein (Fragment) n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843VW62_COLES)

HSP 1 Score: 57.4 bits (137), Expect = 3.480e-5
Identity = 27/76 (35.53%), Postives = 46/76 (60.53%), Query Frame = 0
Query:   19 ELPQTAAVMGGVLDALLQRTLSSMAGYVPLPAIVKKVVSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTATSLLFD 94
            EL + A ++  +L   ++  +  M GYVPLPAI+ K+++++ G   G+F+  +L +L TY Y+  I  TA  L+ D
Sbjct:  412 ELGRGAGLLRSILSQFIKEIVEGMVGYVPLPAIMGKLLAENGGQEFGDFKLTLLGLLGTYGYERRILGTAKLLIED 487          
BLAST of mRNA_P-littoralis_Contig188.12.1 vs. uniprot
Match: A0A6P5GI92_ANACO (vacuolar protein sorting-associated protein 8 homolog n=3 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5GI92_ANACO)

HSP 1 Score: 57.4 bits (137), Expect = 3.900e-5
Identity = 29/71 (40.85%), Postives = 42/71 (59.15%), Query Frame = 0
Query:   24 AAVMGGVLDALLQRTLSSMAGYVPLPAIVKKVVSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTATSLLFD 94
            AAV+  V    +   +  MAGY+PLP I+ KV+SD+     G+F+ +IL ML TY Y+  I  TA  ++ D
Sbjct: 1623 AAVLRRVFSQFVGEIIEGMAGYIPLPVIMTKVLSDNGDQEFGDFKLIILRMLGTYGYEKRILDTAKLVIED 1693          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig188.12.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5JMF4_9PHAE5.470e-6263.76Vps8 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LRX1_ECTSI3.360e-6165.93Vps8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 Rep... [more]
A0A7S2GX04_9STRA1.250e-1845.63Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A836CF74_9STRA1.120e-1250.00Golgi CORVET complex core vacuolar protein 8-domai... [more]
A0A443PFM0_9MAGN9.690e-643.08Vacuolar protein sorting-associated protein 8 isof... [more]
A0A388JYZ1_CHABU1.010e-540.32Vps8 domain-containing protein n=1 Tax=Chara braun... [more]
A0A2I0AWR9_9ASPA1.690e-537.33RING-type domain-containing protein n=1 Tax=Aposta... [more]
A0A1D1XH83_9ARAE2.960e-535.53Vacuolar protein sorting-associated protein 8 (Fra... [more]
A0A843VW62_COLES3.480e-535.53RING-type domain-containing protein (Fragment) n=1... [more]
A0A6P5GI92_ANACO3.900e-540.85vacuolar protein sorting-associated protein 8 homo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 362..376
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 221..260
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 305..376

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig188contigP-littoralis_Contig188:71975..75516 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig188.12.1mRNA_P-littoralis_Contig188.12.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig188 71975..75516 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig188.12.1 ID=prot_P-littoralis_Contig188.12.1|Name=mRNA_P-littoralis_Contig188.12.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=393bp
SGSSFSGGAQGAGAGTAGELPQTAAVMGGVLDALLQRTLSSMAGYVPLPA
IVKKVVSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTATSLLFDSLRTVV
LERHTLKGKGVRVSAVAGVHLHPPLRLVSGNTGNSSASSNASASASAISS
GALEASAATLAASYSADGAGTLAAAEGGGGASTTPAPPVPAGLVDAVGSS
GVISVSPSGLAVVEHLGRRGSSARQGGGEIVASGGRGGGGEVRRGATPSA
ASQQQDAPVSLWRLRAARRRRQARGNKMRALVGWSAGQRGRGRDGVGVGV
GVGAATNASWKSSPDGGGGDEGGRGGGRGANPAARGRRSSSAAAAAAAAA
GGTHHVRGRAGAGGQQQQQQQALGWGSALQARALSGFLPKRT*
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