prot_P-littoralis_Contig187.39.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig187.39.1
Unique Nameprot_P-littoralis_Contig187.39.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length89
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig187.39.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.450.20PAS domaincoord: 1..88
e-value: 2.2E-5
score: 26.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..89
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..89
IPR000014PAS domainCDDcd00130PAScoord: 5..54
e-value: 1.38001E-4
score: 35.6868
IPR035965PAS domain superfamilySUPERFAMILY55785PYP-like sensor domain (PAS domain)coord: 5..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig187contigP-littoralis_Contig187:260315..261477 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig187.39.1mRNA_P-littoralis_Contig187.39.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig187 260315..261477 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig187.39.1 ID=prot_P-littoralis_Contig187.39.1|Name=mRNA_P-littoralis_Contig187.39.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=89bp
MCYIRISFICESFCEWLQIEPEDVLKQPLFSIVDPRDTYALNDAVLQVLA
RGSGHPDSAGSGPDTASMQQQQQQPQQLSAPIAESGFNG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000014PAS
IPR035965PAS-like_dom_sf