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|
Homology
BLAST of mRNA_P-littoralis_Contig187.10.1 vs. uniprot
Match: D7G982_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G982_ECTSI) HSP 1 Score: 702 bits (1812), Expect = 9.380e-249 Identity = 365/551 (66.24%), Postives = 415/551 (75.32%), Query Frame = 1
Query: 52 EECPLAAIFYAEFDNVSGEKLVHQYPPEKFTQSHYNMLSSHIICDKGFCEKVTVVDSMAIPWTLASFPSSIEDDKVPDKYDRVVFRYNISFVFKKGHSTGPRSPYDKEPFVKVLERFGWWLREMELRFGYLYGDRSKKKVRLVRLRECLTRAYKGMKKDRRAWLMMTGPGCPSIMPLLQPYLASTPLKNWRKIQDHDVPVRRCPGMVEIVSSATSALAADPDASWSADFDLVVQQVVPHINGVKHVKKISRDSQQVEIAAVKKALQWVLYTNQILLTDVFRYCNVYVQTTKTAGKFLYTRRPDFREACWERIAKPTPVVVVAVSENASSIGEESEGRQRGGVWILSSKYDGAARIPHFEGRAGAAXXXXXXXXXXSRPAGAAAAVGEFDWGGTE-------------TETGTIPDAPHPMALTRLYASFQCDRCVMDVLRIAEGPEGFVEQFDHRRMCSFGVEVGILRRLHCTPLCVRAEGKEATARRAAMRHTNYPRQSLGGRHDLEYVQKLLNGQRTEDALCCFLYCSPQELTDFAASDGSKVYRHYPF 1665
EECPLAAIFYAEFD+ G K++HQYPPEKFT++H MLSS IICDK FCE+V+VVDSMAIPWTLASFPSSI+D+K+ Y R +NISFVFKKGH+ P PYD++PF+KVLERFG WLREMELRFGYL +S K+V VRL+E L RAYKG+K DRRA LM+TGPGC S+MPLLQPY+A+TPLK+WRKIQDHDVP RRCPG+VE VS+A S LA DPDA W + DLVVQQV+PH+NGVKHVKKISRDS QVEIAAVK AL+WVLYTNQI LTDVFRY N+YVQTT TA YT+R DFR ACWERIAKP VV +V++N SS G ++EG +G X S A AA+ E DWG E ETGTIPDAPHP L RLY SFQCDR VMDVL+IAEGPEGFVEQFDHRRMC+FG EVGILRRLHC P CVRAEGKEA ARR + ++PR+SLG R DLEYVQ+L+NG+RTEDALCCFL CSPQELT+FA SDGSKVYR +PF
Sbjct: 25 EECPLAAIFYAEFDDNEGGKILHQYPPEKFTRTHCKMLSSRIICDKEFCERVSVVDSMAIPWTLASFPSSIKDEKL---YKRNCLSFNISFVFKKGHAQAPVVPYDRDPFIKVLERFGRWLREMELRFGYL---KSGKQVNKVRLQELLARAYKGLKTDRRALLMLTGPGCTSLMPLLQPYVAATPLKDWRKIQDHDVPARRCPGLVESVSAAASELAMDPDAVWGPEVDLVVQQVLPHVNGVKHVKKISRDS-QVEIAAVKAALRWVLYTNQISLTDVFRYSNIYVQTTTTAE---YTKRKDFRMACWERIAKP--VVAASVADNVSSAGGDAEGMYQGPASQQQXXXXXXXXXXXXX------XLTVGNGTSSSTAATPRAALPESDWGAVEGDGAXXXXXXXIEAETGTIPDAPHPACLRRLYGSFQCDRSVMDVLKIAEGPEGFVEQFDHRRMCAFGAEVGILRRLHCAPHCVRAEGKEAAARREEVDRASHPRRSLGDRFDLEYVQRLMNGRRTEDALCCFLSCSPQELTEFATSDGSKVYRLHPF 557
BLAST of mRNA_P-littoralis_Contig187.10.1 vs. uniprot
Match: A0A6H5JGD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGD3_9PHAE) HSP 1 Score: 268 bits (686), Expect = 2.330e-83 Identity = 148/245 (60.41%), Postives = 164/245 (66.94%), Query Frame = 1
Query: 970 ACWERIAKPTPVVVVAVSENASSIGEESEGRQRGGVWILSSKYDGAARIPHFEGRAGAAXXXXXXXXXXSRPAGAAAAVGEFDWGGTE-------------TETGTIPDAPHPMALTRLYASFQCDRCVMDVLRIAEGPEGFVEQFDHRRMCSFGVEVGILRRLHCTPLCVRAEGKEATARRAAMRHTNYPRQSLGGRHDLEYVQKLLNGQRTEDALCCFLYCSPQELTDFAASDGSKVYRHYPF 1665
ACWERIAKP VV +V++N SS G ++EG G + A R G AG S A AA E DWG E ETGTIP+APHP L RLY SFQCDR VMDVL+IAEGPEGFVEQFDHRRMC+FGVEVGILRRLHC P CVRAEGKEA ARR + ++PR+SLG R DLEYVQ+LLNG+RTEDALCCFL CSPQELT+FA SDGSKVYR YPF
Sbjct: 2 ACWERIAKP--VVAASVADNVSSAGGDAEGMYLGPASQQQEEAPNAER-----GTAGGGWIVGDGTSS-STAATPRAAPAESDWGAVEGDGXXXXXXXXIEAETGTIPEAPHPACLRRLYGSFQCDRSVMDVLKIAEGPEGFVEQFDHRRMCAFGVEVGILRRLHCVPHCVRAEGKEAEARREEVDRASHPRRSLGDRFDLEYVQRLLNGRRTEDALCCFLSCSPQELTEFATSDGSKVYRLYPF 238
BLAST of mRNA_P-littoralis_Contig187.10.1 vs. uniprot
Match: A0A2D4C9S3_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C9S3_PYTIN) HSP 1 Score: 118 bits (296), Expect = 1.820e-26 Identity = 90/295 (30.51%), Postives = 143/295 (48.47%), Query Frame = 1
Query: 64 LAAIFYAEFDNVSGEKLVHQYPPEKFTQSHYNMLSSHIICDKGFCEKVTVVDSMAIPWTLASFPSSIEDDKVPDKYDRVVFRYNISFVFKKGHSTGPRSPYDKEPFVKVLERFGWWLREMELRFGYLYGDRSKKKVRLVRLRECLTRAYKGMKKDRRAWLMMTGPGCPSIMPLLQPYLASTPLKNWRKIQDHDVPVRRCPGMVEIVSSATSALAA--DPDASWSADFDLVVQQVVPHINGVKHVKKISRDSQQVEIAAVKKALQWVLYTNQILLTDVFRYCNVYVQTTKTAGKFL 942
+ +FY+EFDN++G ++V Q P + ++ +SS+II DK C K+ V + + +P IEDDK Y R +NI+FVF + T PF +L + G + ME G+L D + K L ++ L + + + D + + ++ L P L + D+ VPV AT L + +A W DL +QQ+VP+I+GVK+VK+IS ++ VEIA VKK L+ +LY I +TD+F + N+Y K + + L
Sbjct: 2 IKGLFYSEFDNIAGPQIVFQAPAHVLSNEVFDSVSSYIIIDKALCNKIITVCVQGLQ--IVGYPVCIEDDK----YHRNALLFNIAFVFDEHVET--------TPFRPILRKLGALVESMEKESGFLSRDAGESKALLAQI---LPQILRDLTLDGECTIPVDAANVINLK--LFPTLGDP-----SPVFDYQVPV------------ATRDLRQLLENNAEW----DLALQQIVPYIDGVKYVKRISIEA-DVEIAIVKKCLRQLLYYGCITMTDIFLHSNIYGHAAKPSDERL 255
BLAST of mRNA_P-littoralis_Contig187.10.1 vs. uniprot
Match: W4G9B1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G9B1_9STRA) HSP 1 Score: 117 bits (293), Expect = 1.290e-25 Identity = 90/311 (28.94%), Postives = 140/311 (45.02%), Query Frame = 1
Query: 64 LAAIFYAEFDNVSGEKLVHQYPPEKFTQSHYNMLSSHIICDKGFCEKVTVVDSMAIPWTLASFPSSIEDDKVPDKYDRVVFRYNISFVFKKGHSTGPRSPYDKEPFVKVLERFGWWLREMELRFGYLYGDRSKKKVRLVRLRECLTRAYKGMKKDRRAWLMMTGPGCPSIMPLLQPYLASTPLKNWRKIQDHDVPVRRCPGMVEIVSSATSALAADPD--ASWSADFDLVVQQVVPHINGVKHVKKISRDSQQVEIAAVKKALQWVLYTNQILLTDVFRYCNVYVQTTKTAGKFLYTRRPDFREACWERIA 990
+ AIFY+EFDN++G ++V+Q PP + ++ +S +II DK C K+ V I + +P IEDDK Y R +NI FVF K P P +L + G + ME G+L + SK + + PSI+ L Y ST + I + V ++ P ++ D S ++DL +Q++VPHI+GV +VK+I+ + +V+IA VK L+ +LY I + D+F + N Y T K F P ++ C E I+
Sbjct: 3 IQAIFYSEFDNIAGPQIVYQAPPNALSNEVFDSVSGYIIIDKALCGKIITVCPQGIK--IVGYPVCIEDDK----YHRNALLFNIGFVFDKDADAAPYKP--------ILRKLGALMESMEKEMGFLSKEASKATLSTI---------------------------LPSILHDLTMYGESTTTIDTANIINLKV-FQKLPPPPNVLDHQVPVAIRDLHDLLKHSVEWDLALQKIVPHIDGVNYVKRIAIAA-EVDIAIVKSCLRQLLYYRCITMIDIFMHSNNYATTPKLHSFF---NDPLLQQECIEYIS 267
BLAST of mRNA_P-littoralis_Contig187.10.1 vs. uniprot
Match: W4G7E4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G7E4_9STRA) HSP 1 Score: 115 bits (289), Expect = 6.570e-25 Identity = 86/294 (29.25%), Postives = 133/294 (45.24%), Query Frame = 1
Query: 64 LAAIFYAEFDNVSGEKLVHQYPPEKFTQSHYNMLSSHIICDKGFCEKVTVVDSMAIPWTLASFPSSIEDDKVPDKYDRVVFRYNISFVFKKGHSTGPRSPYDKEPFVKVLERFGWWLREMELRFGYLYGDRSKKKVRLVRLRECLTRAYKGMKKDRRAWLMMTGPGCPSIMPLLQPYLASTPLKNWRKIQDHDVPVRRCPGMVEIVSSATSALAADPD--ASWSADFDLVVQQVVPHINGVKHVKKISRDSQQVEIAAVKKALQWVLYTNQILLTDVFRYCNVYVQTTKTAGKF 939
+ AIFY+EFDN++G ++V+Q PP + ++ +S +II DK C K+ V I + +P IEDDK Y R +NI FVF K P P +L + G + ME G+L + SK + + PSI+ L Y ST + I + V ++ P ++ D S ++DL +Q++VPHI+GV +VK+I+ + +V+IA VK L+ +LY I + D+F + N Y T K F
Sbjct: 3 IQAIFYSEFDNIAGPQIVYQAPPNALSNEVFDSVSGYIIIDKALCGKIITVCPQGIK--IVGYPVCIEDDK----YHRNALLFNIGFVFDKDADAAPYKP--------ILRKLGALMESMEKEMGFLSKEASKATLSTI---------------------------LPSILHDLTMYGESTTTIDTANIINLKV-FQKLPPPPNVLDHQVPVAIRDLHDLLKHSVEWDLALQKIVPHIDGVNYVKRIAIAA-EVDIAIVKSCLRQLLYYRCITMIDIFMHSNNYATTPKLHSFF 253
BLAST of mRNA_P-littoralis_Contig187.10.1 vs. uniprot
Match: W4G7J2_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G7J2_9STRA) HSP 1 Score: 117 bits (293), Expect = 1.120e-24 Identity = 90/311 (28.94%), Postives = 140/311 (45.02%), Query Frame = 1
Query: 64 LAAIFYAEFDNVSGEKLVHQYPPEKFTQSHYNMLSSHIICDKGFCEKVTVVDSMAIPWTLASFPSSIEDDKVPDKYDRVVFRYNISFVFKKGHSTGPRSPYDKEPFVKVLERFGWWLREMELRFGYLYGDRSKKKVRLVRLRECLTRAYKGMKKDRRAWLMMTGPGCPSIMPLLQPYLASTPLKNWRKIQDHDVPVRRCPGMVEIVSSATSALAADPD--ASWSADFDLVVQQVVPHINGVKHVKKISRDSQQVEIAAVKKALQWVLYTNQILLTDVFRYCNVYVQTTKTAGKFLYTRRPDFREACWERIA 990
+ AIFY+EFDN++G ++V+Q PP + ++ +S +II DK C K+ V I + +P IEDDK Y R +NI FVF K P P +L + G + ME G+L + SK + + PSI+ L Y ST + I + V ++ P ++ D S ++DL +Q++VPHI+GV +VK+I+ + +V+IA VK L+ +LY I + D+F + N Y T K F P ++ C E I+
Sbjct: 3 IQAIFYSEFDNIAGPQIVYQAPPNALSNEVFDSVSGYIIIDKALCGKIITVCPQGIK--IVGYPVCIEDDK----YHRNALLFNIGFVFDKDADAAPYKP--------ILRKLGALMESMEKEMGFLSKEASKATLSTI---------------------------LPSILHDLTMYGESTTTIDTANIINLKV-FQKLPPPPNVLDHQVPVAIRDLHDLLKHSVEWDLALQKIVPHIDGVNYVKRIAIAA-EVDIAIVKSCLRQLLYYRCITMIDIFMHSNNYATTPKLHSFF---NDPLLQQECIEYIS 267
BLAST of mRNA_P-littoralis_Contig187.10.1 vs. uniprot
Match: A0A6G0X4W8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X4W8_9STRA) HSP 1 Score: 116 bits (290), Expect = 2.100e-24 Identity = 88/316 (27.85%), Postives = 141/316 (44.62%), Query Frame = 1
Query: 64 LAAIFYAEFDNVSGEKLVHQYPPEKFTQSHYNMLSSHIICDKGFCEKVTVVDSMAIPWTLASFPSSIEDDKVPDKYDRVVFRYNISFVFKKGHSTGPRSPYDKEPFVKVLERFGWWLREMELRFGYLYGDRSKKKVRLVRLRECLTRAYKGMKKDRRAWLMMTGPGCPSIMPLLQPYLAST------PLKNWRKIQDHDVPVRRCPGMVEIVSSATSALAADPDASWSADFDLVVQQVVPHINGVKHVKKISRDSQQVEIAAVKKALQWVLYTNQILLTDVFRYCNVYVQTTKTAGKFLYTRRPDFREACWERIAK 993
+ IFY+EFDN++G ++++Q PP + ++ +S +II DK C K+ V I + +P IEDDK Y R +NI F+F K D P+ +L + G + ME G+L + +K + + PSI+ L Y ST + N + Q P C V + L + S ++DL +Q++VPHI+GV +VK+I+ S +V+I+ VK L+ +LY I + D+F + N+Y T+K F ++AC I K
Sbjct: 2 IQGIFYSEFDNIAGPQIIYQAPPNALSNEVFDSVSGYIIIDKALCGKIITVCPQDIK--IVGYPVCIEDDK----YHRNALLFNIGFIFHK--------EADAIPYKPILRKLGTLMESMEKEMGFLSKESTKATLETI---------------------------LPSILSDLTLYGESTITIDPANIINLKVFQKLPPPPNVCDHEVPVAIRDLKDLLKN-----SVEWDLALQKIVPHIDGVNYVKRIAIVS-EVDISIVKNCLRQLLYYGCITMIDIFLHSNIYATTSKIYDFF---NNAALQQACLSYICK 267
BLAST of mRNA_P-littoralis_Contig187.10.1 vs. uniprot
Match: A0A485KK46_9STRA (Aste57867_8387 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KK46_9STRA) HSP 1 Score: 112 bits (281), Expect = 3.190e-23 Identity = 87/316 (27.53%), Postives = 143/316 (45.25%), Query Frame = 1
Query: 64 LAAIFYAEFDNVSGEKLVHQYPPEKFTQSHYNMLSSHIICDKGFCEKVTVVDSMAIPWTLASFPSSIEDDKVPDKYDRVVFRYNISFVFKKGHSTGPRSPYDKEPFVKVLERFGWWLREMELRFGYLYGDRSKKKVRLVRLRECLTRAYKGMKKDRRAWLMMTGPGCPSIMPLLQPYLAST------PLKNWRKIQDHDVPVRRCPGMVEIVSSATSALAADPDASWSADFDLVVQQVVPHINGVKHVKKISRDSQQVEIAAVKKALQWVLYTNQILLTDVFRYCNVYVQTTKTAGKFLYTRRPDFREACWERIAK 993
+ IFY+EFDN++G ++V+Q PP + ++ +S +II DK C K+ V I + +P IEDDK Y R +NI FVF K D P+ +L + G + ME +L + +K + + PSI+ L Y ST + N + P C V + + L + S ++DL +Q++VPHI+G+ +VK+IS + +VEI+ VK L+ +LY I + D+F + N+Y T+K + + P ++AC I++
Sbjct: 2 IQGIFYSEFDNIAGPQIVYQAPPNALSNEVFDSVSGYIIIDKALCGKIITVCPQDIK--IVGYPVCIEDDK----YHRNALLFNIGFVFHKDA--------DAVPYKPILRKLGALMESMEKELCFLSKETTKATLATI---------------------------LPSILHDLTLYGESTITIDTSNIINLKVFHKLPPPPNVCDFQVPVAIRDLNDLLKN-----SVEWDLALQKIVPHIDGINYVKRISIVA-EVEISIVKNCLRQLLYYGCITMIDIFLHSNMYSTTSKI---YEFFNDPSLQQACVAYISR 267
BLAST of mRNA_P-littoralis_Contig187.10.1 vs. uniprot
Match: A0A8K1CKR6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CKR6_PYTOL) HSP 1 Score: 112 bits (279), Expect = 6.030e-23 Identity = 86/289 (29.76%), Postives = 137/289 (47.40%), Query Frame = 1
Query: 64 LAAIFYAEFDNVSGEKLVHQYPPEKFTQSHYNMLSSHIICDKGFCEKVTVVDSMAIPWTLASFPSSIEDDKVPDKYDRVVFRYNISFVFKKGHSTGPRSPYDKEPFVKVLERFGWWLREMELRFGYLYGDRSKKKVRLVRLRECLTRAYKGMKKDRRAWLMMTGPGCPSI--MPLLQPYLASTPLKNWRKIQDHDVPVRRCPGMVEIVSSATSALAADPDASWSADFDLVVQQVVPHINGVKHVKKISRDSQQVEIAAVKKALQWVLYTNQILLTDVFRYCNVYVQTTK 924
L +FY+EFDN++G ++V Q P + + ++ +SS+II DK C K+ V + I + +P IEDDK Y R +NI+FVF +G T P +L + G + ME G+L SK L L + + + + + ++ P LQ + + D+ VPV A+ ++++DL +QQ+VP I+GVK+VK+IS ++ VEIA VKK L+ +LY I + D+F + N+Y T K
Sbjct: 4 LKGVFYSEFDNIAGPQIVFQAPSDVLSSDVFDSVSSYIIIDKALCGKIITVCAQNIK--IVGYPVCIEDDK----YHRNALLFNIAFVFDQGVDTASYRP--------ILRKLGALVESMERESGFLSRGESK-----ALLEHILPQILRDLSFSGECTIPVDAANIINLKLFPTLQ---------DPSTVFDYQVPV---------------AIRDLRQLLDNSEWDLALQQIVPFIDGVKYVKRISVEA-DVEIAIVKKCLRQLLYYGCITMIDIFLHSNIYAITPK 248
BLAST of mRNA_P-littoralis_Contig187.10.1 vs. uniprot
Match: A0A5D6XVG5_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVG5_9STRA) HSP 1 Score: 109 bits (272), Expect = 5.210e-22 Identity = 87/290 (30.00%), Postives = 133/290 (45.86%), Query Frame = 1
Query: 64 LAAIFYAEFDNVSGEKLVHQYPPEKFTQSHYNMLSSHIICDKGFCEKVTVVDSMAIPWTLASFPSSIEDDKVPDKYDRVVFRYNISFVFKKGHSTGPRSPYDKEPFVKVLERFGWWLREMELRFGYLYGDRSKKKVRLVRLRECLTRAYKGMKKDRRAWLMMTGPGCPSIMPLLQPYLASTP-LKNWRKIQDHDVPVRRCPGMVEIVSSATSALAADPDASWSADFDLVVQQVVPHINGVKHVKKISRDSQQVEIAAVKKALQWVLYTNQILLTDVFRYCNVYVQTTKTA 930
L +FY+EFDN +G ++V Q PP + ++ +SS+II DK C K+ V + +P IEDDK Y R +NI FVF + T P +L + G + ME G+L SK L + D L++TG + L P L++ + D+ VPV + L + A W DL +QQ+VP I+GV++VK+IS ++ VEIA VKK ++ +LY + + D+F + N+Y T + A
Sbjct: 2 LKGVFYSEFDNDAGPQIVFQAPPNLLSNEAFDSISSYIIIDKALCGKIITV--CVQQKKIVGYPVCIEDDK----YHRNALLFNIGFVFDEHVDTAAYRP--------ILRKLGALMESMEKESGFLLNSTSK---------ALLAHILPQILSD----LLLTGECTIPVNAANTINLKLFPKLQDPSPVFDYQVPV----------AIRDLRLLLENSAEW----DLALQQIVPFIDGVRYVKRISLEA-DVEIAIVKKCVRQLLYYGCVAMVDIFLHSNIYTVTPRIA 249
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D7G982 |
| Preferred name | NPR2 |
| PFAMs | NPR2 |
| Model size | 1668 |
| Max annot lvl | 2759|Eukaryota |
| KEGG rclass | RC00002 |
| KEGG ko | ko:K17686,ko:K20405 |
| KEGG TC | 3.A.3.5 |
| KEGG Reaction | R00086 |
| KEGG Pathway | ko01524,ko04016,ko04150,map01524,map04016,map04150 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000306,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006865,GO:0006950,GO:0006995,GO:0007154,GO:0008150,GO:0009267,GO:0009605,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009968,GO:0009987,GO:0009991,GO:0010506,GO:0010508,GO:0010646,GO:0010647,GO:0010648,GO:0015711,GO:0015804,GO:0015824,GO:0015840,GO:0015849,GO:0016020,GO:0016241,GO:0019222,GO:0019755,GO:0019898,GO:0023051,GO:0023057,GO:0031090,GO:0031312,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0031667,GO:0031668,GO:0031669,GO:0032006,GO:0032007,GO:0032101,GO:0032103,GO:0032104,GO:0032106,GO:0032107,GO:0032109,GO:0032879,GO:0032890,GO:0032991,GO:0033043,GO:0033554,GO:0034198,GO:0035859,GO:0042221,GO:0042493,GO:0042594,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043269,GO:0043562,GO:0044070,GO:0044087,GO:0044088,GO:0044422,GO:0044424,GO:0044425,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0046942,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0050789,GO:0050794,GO:0050896,GO:0051049,GO:0051128,GO:0051179,GO:0051234,GO:0051716,GO:0051952,GO:0051955,GO:0065007,GO:0070881,GO:0071496,GO:0071702,GO:0071705,GO:0080134,GO:0080135,GO:0097042,GO:0098588,GO:0098805,GO:0098852,GO:1902115,GO:1902531,GO:1902532,GO:1903432,GO:1903832,GO:1903833,GO:1904262,GO:1990130,GO:1990928,GO:2000785 |
| Exons | 12 |
| Evalue | 1.54e-249 |
| EggNOG OGs | KOG3789@1|root,KOG3789@2759|Eukaryota |
| Ec32 ortholog description | Nitrogen permease regulator 2 |
| Ec32 ortholog | Ec-13_002960.1 |
| EC | 3.6.3.54 |
| Description | regulation of autophagosome assembly |
| Cds size | 1668 |
| COG category | S |
| BRITE | ko00000,ko00001,ko01000 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789893.6259775-CDS-P-littoralis_Contig187:105575..105709 | 1680789893.6259775-CDS-P-littoralis_Contig187:105575..105709 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig187 105576..105709 + |
| 1680789893.6618912-CDS-P-littoralis_Contig187:107749..107903 | 1680789893.6618912-CDS-P-littoralis_Contig187:107749..107903 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig187 107750..107903 + |
| 1680789893.675047-CDS-P-littoralis_Contig187:109355..109418 | 1680789893.675047-CDS-P-littoralis_Contig187:109355..109418 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig187 109356..109418 + |
| 1680789893.6880658-CDS-P-littoralis_Contig187:110020..110131 | 1680789893.6880658-CDS-P-littoralis_Contig187:110020..110131 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig187 110021..110131 + |
| 1680789893.7056296-CDS-P-littoralis_Contig187:110621..110777 | 1680789893.7056296-CDS-P-littoralis_Contig187:110621..110777 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig187 110622..110777 + |
| 1680789893.7217185-CDS-P-littoralis_Contig187:111335..111473 | 1680789893.7217185-CDS-P-littoralis_Contig187:111335..111473 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig187 111336..111473 + |
| 1680789893.733666-CDS-P-littoralis_Contig187:112706..112763 | 1680789893.733666-CDS-P-littoralis_Contig187:112706..112763 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig187 112707..112763 + |
| 1680789893.747521-CDS-P-littoralis_Contig187:113730..113859 | 1680789893.747521-CDS-P-littoralis_Contig187:113730..113859 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig187 113731..113859 + |
| 1680789893.759991-CDS-P-littoralis_Contig187:114312..114541 | 1680789893.759991-CDS-P-littoralis_Contig187:114312..114541 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig187 114313..114541 + |
| 1680789893.7712643-CDS-P-littoralis_Contig187:115799..116007 | 1680789893.7712643-CDS-P-littoralis_Contig187:115799..116007 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig187 115800..116007 + |
| 1680789893.7852123-CDS-P-littoralis_Contig187:116883..117019 | 1680789893.7852123-CDS-P-littoralis_Contig187:116883..117019 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig187 116884..117019 + |
| 1680789893.825381-CDS-P-littoralis_Contig187:117699..117852 | 1680789893.825381-CDS-P-littoralis_Contig187:117699..117852 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig187 117700..117852 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig187.10.1 >prot_P-littoralis_Contig187.10.1 ID=prot_P-littoralis_Contig187.10.1|Name=mRNA_P-littoralis_Contig187.10.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=556bp
MPATATTAAAAEQEEESEECPLAAIFYAEFDNVSGEKLVHQYPPEKFTQS
HYNMLSSHIICDKGFCEKVTVVDSMAIPWTLASFPSSIEDDKVPDKYDRV
VFRYNISFVFKKGHSTGPRSPYDKEPFVKVLERFGWWLREMELRFGYLYG
DRSKKKVRLVRLRECLTRAYKGMKKDRRAWLMMTGPGCPSIMPLLQPYLA
STPLKNWRKIQDHDVPVRRCPGMVEIVSSATSALAADPDASWSADFDLVV
QQVVPHINGVKHVKKISRDSQQVEIAAVKKALQWVLYTNQILLTDVFRYC
NVYVQTTKTAGKFLYTRRPDFREACWERIAKPTPVVVVAVSENASSIGEE
SEGRQRGGVWILSSKYDGAARIPHFEGRAGAAAAAAAAAVQASRPAGAAA
AVGEFDWGGTETETGTIPDAPHPMALTRLYASFQCDRCVMDVLRIAEGPE
GFVEQFDHRRMCSFGVEVGILRRLHCTPLCVRAEGKEATARRAAMRHTNY
PRQSLGGRHDLEYVQKLLNGQRTEDALCCFLYCSPQELTDFAASDGSKVY
RHYPF* back to topmRNA from alignment at P-littoralis_Contig187:105576..117852+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig187.10.1 ID=mRNA_P-littoralis_Contig187.10.1|Name=mRNA_P-littoralis_Contig187.10.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=12277bp|location=Sequence derived from alignment at P-littoralis_Contig187:105576..117852+ (Pylaiella littoralis U1_48)
ATGCCAGCAACGGCAACAACGGCCGCAGCAGCAGAACAAGAAGAGGAGAG
CGAGGAATGTCCCCTGGCCGCAATCTTCTACGCGGAATTCGACAACGTCA
GCGGCGAGAAGCTCGTCCACCAGTATCCCCCAGAGTAAGACGTTTTTCTT
TTGTGGGTTTCCATCATTTCAAGTCGGATTTTCCGTCTGTATCGTTATTG
GGCAGCTAGGATTTCCCCCCGCGTAAGGATGTACCTGGTACCCTCTTTTT
GGGTAGGTAGGTCGTCTGTGACCACAAACGTGTACCCGGTCGGATGGGTC
AAAGCGGCCGCAGCAAAAAATGAAAGGGAACTGCGTCACAATTTAATTGT
TATCCCCGTCTTCTGTGGATTCATTCACCGGGTCTACAATACGCATTTTC
CGTCATGCTTCGAAGCACTTCGTATATCGTTTCAGTCCGGCATTAGCGAG
TTCATCAGCATTCCCCAAAGTGTGTATGCGCGTGTGTGTATTTCTGTGTG
TAATTGCCGTTACCCCGAGGAGTATTCTTTAAGTACTGTTTTGCATATTC
ACATCTCACCTGTAACTGCTGTACAGGGCACCAAGAGCGTAAGAAGCGCT
ATTCACGAGGGTTTCCTTTTCGGCCGAGGATGGCTCTGGGTCTTGCATCG
AAAAAGCTTGTGGTATCTCCCTCACCAGCTTTTTTAGCAAAACCATTTCA
GATTTTTTTTCATTTTGAAGGAATCGAGCTTTCACCTCTTGCTCCTATGA
AAGCGTTTCGTGCCGTTTCCACTGTTGAAGTCCTCCAGTCTGACGTACTT
GGATATTGATTACGACAATACTCCGGAGTATTATGTATCGAGAAAAGCGC
TTTTTCCGAACAAAGAAGAAACACGCACGGACGAAGGGGCCCCGTGGGAT
GTGTTAAGTTTCTCACAGGGAGGGATCCTTTCATCCCGGCCGGGAGCTAA
GAATACATTTTTCTTTACTGAACAGAAAAGCGCCTGTTGCTTTGCTGCCG
TGTGTGTACTTGTGTGTGCTTTGGGTTGTGATCAGCGAGAGAGAGATTAC
AAACACTGCTGGGTGTGTAGTGTGTAGCCCTAACGTATGGATTGTGATCC
TAGAGGGGATGAAAGCTGTGTGCTTTTTCCTCGCGCCAGGAGCTTCTTTC
CCACCGGCGGCCCGTTACTGGTGGACTTTTCGACAAATGTTAAGGAACTT
TCCTCACCAATATATTTTCGGCGAGAACGGTAAAGAAATGAGGAAGCCCG
AAGCCGAAGCTCTCTGCAGGAAAGCCCCTCCAAGTGGTTGACCAATCGGA
GAAGTATTCTGAGTTCCACTTTCCAACGTTCCATGTGCCCCATGTGCTTC
TCCGATATCCACCCAGAGATTTTTAACAGGGAGTGTTTCCATGCAATCCG
GCCGGGGAATATAACCGCTTCCTCAGCAGTAACCTCAACATGAGTGGCTA
CCCTGTATTTGGTACCACGTTTTACGAAGTCCTTCGTACATTTTTAGTAA
TTTTTTTGCCTCATGATAACTAAAAAGTGCTTCGGTGAGTTCCTCCTCCT
TCTATCAATTTACTACAGCAATAACCTCAACATGAGTGGCTACCCTGTAT
TTGGTACCATGTTTAACGAAGTTCTTCGTACATTTTTAGTCATTTTTATG
CCTTATGATAACAACTACTCCGGAGTAAAAAGTATTTCGGTGAGTTCCTC
CTCCTTCTATCAATTTACTGTACGAAAGGCCAACCATGAAGTAATCGTTA
AAGTAATCCGAACAAATGTAAGTGCGTGGTTTTTTCACGCATGTATTCCA
ATTGAATGCAAATGACGAGGTGAAGTGCTTGATGAAAACTTCTTCGTTTG
ACGCGAATTTTTCCCACAGCAGTAGGTCGCATTGGATAGAACATGGGACT
ATGCTGGAACTATTCCAAAAGCTCGATTACGGTACCGTACAGCAGAACTA
GTGTCGGGTGCCAAAACGGACACCCAGCGTTATATGTAGCTCATCGGCAG
CTCTCCAAAAACGCAGCTATCGTTATCCCACCCACCCACCTACCCACTCT
CCCACCCTCCCGCTAATCCATGCACACACATACACACACCTACGCACACA
CACTCACCCCCCCTCCCTACACACACCTACCCAACCACGACGACAACAAA
TACCCGCTTGACCATCGACCGCAGGAAGTTTACGCAGTCGCACTACAACA
TGCTGTCCTCTCACATCATCTGCGACAAAGGTTTCTGCGAGAAGGTCACC
GTGGTTGATTCCATGGCCATCCCGTGGACCCTGGCCTCCTTCCCTTCCTC
GATCGAAGACGACAAGGTACCAGACAAGGTACGTGCGTATTGAAAAGCGA
ATTTCAAAAAGGGGGGTAACCCCCGTGGATGGTGCGGAATTGGGAAGGAT
GTGTGTGTGTGTGTGTGTTTTCGTCCCATTTTTTTCCGGGCACCAGTCTT
CACCTTTCGGTATGAAGTGGGTGCATCAGCCGGGGTCACACAGAAGGAAG
GTCACACATGAATGTTTGCTTTTTTTGCTTCCGCCCCACATTCTGCGGTG
CTAGTCTTTTTTGCCTTTCAGCATGTTATCGCGAGAAGGGTTCGACCGTC
CCTTACCCTCGTCCAAGAAGGGGACGAGACTACGCAGAGAAATGAAAAGA
GGCGTCTGTGTGTGTGTGTGTGTGTGTGTGTTTTTCGTCCCATTTATTCT
GGGCACCAGTCTTCTTGTACACCTTACGGTATAAAGTGTGTGCACCAACC
GGGGTTACACAGAAGGAGGAAGGTCACCCAAGATTTGTTATTATCCCTCC
ACCCACCTTTAGCTGCGATGCTTGTCTTCTTTTGCCTTTCAGCTTTTTAT
CTCATTGCGAGAAGGGTTCGACCGTCCCTTACCCCCGTCAACTGTCAGTC
GGATGGATGTGTTTGATTACTCGCGACATAGTCGTTTTCCACTCCTTAGA
ATTATGGTGAGAAGAATCCGAGATCGTGTGACTCCACCGGAACCCGAACT
CATGTCCTGGGTGCCAGCAGGCTCCGAGCTTACTACACACGCTTGTACGC
AAAATATCGTGGTAATGGTCCTGAACTTTGTTTTTAATTGCTAGAAAGTG
GGTTTCCTGTACCTTTTGTAGTCAAGCCGCCGGTTGTCTTCCTTCCCATA
GCTCGATTAGGAACAACAAGGTACTGCCGTGCTGCGTTGAGTTTTCTTGT
GCATTTTTTATTCAAATTGTTATTGAACTTTTCTGTTCCCCTTTTCGTTG
TCGATTGTCCTGTCATTCTCTTCCTCGATAAGGGACAACAACGTGCAGTT
TCCTGCGTGTACCTTTTTTTCATTGGCTATGGACCCTAGCCCCCTCCTCT
CTCGATCCACAACAATGAGGGAAACGTGCTGCACTAGCTTCCCCATTAAG
TACCTCTGTGTTGTTGAACAATTTAGTTTCCCGTTCTTGAATAATTTAGT
GTCCTGTACTGTTATCTTTTTGGGGGTTGCCTGCGATCATGAAAGGCAGG
AGCAGGCAGGAGTATACAGGTATAGGATATAGAGGTCGGAACGTCTTGAA
ATATGCACACGGCATCAAAAGCTCCTACAAAAACATCAAGATATTGGATG
TAGAGGTCGGAACAGCTTCCAGTCTGAACAACAACAACAACGACAACAAC
AACGGGACTGTCAGCGGGACCGTCAACAACAACCAATAGTTGCGTGATTG
TCGTCGGACTGTCAGCGGGACTGTCAACAGCTTGTTCTCTCCTTTCCGTT
CTTTTCACGTGGCCCCCCTCCGTGATGCAGTACGACCGGGTCGTCTTCAG
GTACAACATTAGCTTTGTCTTCAAGAAGGGGCATTCCACGGGGGTGAGTC
GAACATGGTATGACTATGTTTTTCGTTGTATGCAGTTTACAGCAGTAGTA
CGTGTCGCAGTCCACAACTCTTTGACAGTACCGTGCGCGATGCAGGGAGT
GAGATGGGTGTCTTACAATACAGCAGCAAAATCTATGATACCACATGCAG
TGCATGGCAGTTACTGTTGCTGTTAAAGTTCGCTTCGCCTTCAGGCAGTT
TATGTGTGTGTGTGACAGCGAGTGCGCATGTTGTATCCCATATTTTCCTG
ACGCCAGTCTACACCTATGCGGGCGCGCATTAGCCGGGGCGTGTCACACA
GGAGGTAGGTCAACACATGATTTTATTTTTTTGCGAGAAAGACTTTTCAA
CAGCAGTTCAGCCTGCACCTGGTAATACTACGAAGTACACACCATGGTGT
ACTATTTGGATTGTGTGCACCTTTTCTGCCTGCATCCCATTTTGTGGAGG
ATACTCAAACAAGTAAAGTCGTCAGTGCGCACACACGGTGCATGATCTGC
CCTACCAAAGCCGAAGTGTTTTTTTTCGCACCTTTTCGAACCCTGGCGGG
GGCCCCGCGGGGGGGTACTCCATCTTGCCAATCAACATCGACCAGCCGAG
GTCCCCGTACGACAAGGAACCGTTCGTTAAGGTTCTTGAGCGCTTCGGGT
GGTGGTTGCGAGAAATGGAGCTCAGATTCGGGTATCTCTACGGTGACAGG
AGCAAGGTGAGCGTGGGTTGGTTTTCTAGTGCAGTGCTGCTCTTCCCGAT
ACTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT
TGTTGTTGTTGTTGTTGTTGTTGTTGTGGTTTTTGCTGTCGTTGTTGTGG
TTTTTGCTGGTAGTGGGTGGTGGTGTCGGTGCTGGTGCTGGTGTTGATGT
TGTTGTTGGTGGCATTGATTGGTGTCGGCGCTGGTGCTGGTGTTGTTTTT
GTTCGTGGGGGTGGCGTTGGTGGTGCTGTGGCCGTTCGCAACTTTATTTT
TCATTTTTTCCTTCGTCGCCGTCGCCTTCTCTCTCTTCCTTCTTCTACAT
TGTACTGGTATGTGGTTTGTGATATCGTATGCTTTTCGTTGCTGTTGGGG
TGCCCCCTCTCTTCGCCTTCGTCACCTTCGTCGCCTTCCTCTCCTTCTTC
CTTTAATTCTCCGTTGTCCGTGCGATCCAAACGCGCGTATTAGAAGAAAA
AGGTCCGATTGGTGCGGTTGCGCGAGTGCTTGACGCGGGCCTACAAGGGC
ATGAAAAAAGATCGTCGGGCCTGGCTCATGATGACGGGACCGGGCTGTCC
CTCCATAATGCCCCTGCTGCAGCCGTATCTGGCGTCAACCCCCCTGAAGA
ATGTGAGCTAACACCCACCCGCAGCACTCGTGGTATGGTATAAGTGCTTG
AGTAACTATACCTGCCGCATGGCAGCGCTCGTGGTATGGTATGAGTGCTT
GTGTACCTGTACCTGTCGCATGCACTCCATGCCTGTGCGTTTGTCCGTAT
GGAGCTTGTCTGTAGTTGTAGTTGTAGTTGTAGTTGTAGTTGTAGTTGTA
GTTGTAGTTGCAGTTGCAGTTGCAGTTGTAGTTGTTGTTGTTGTTGTTGT
TGCTGTTGTTGCCGACGCACAACAAACACGGTTCCGTTTCATATTTTCAT
CAACTATTGGCAGTAGCGCGTAAGATAGCACGACGAGGAGCTAGTTTCTA
CCATTAGAACTCACCTCCACCTTTGGTTGGGACGTATTCGTGTGTAGGTG
TTGTAAGCTCGCCCTTGTCTTTTAAGTGAAACCTCACATAAGTTCTTGGA
TCATGCGTTGCCTGTCGTGAACAAAATTCTGCTCGTGTTGACCCACTTTT
TTTCTACCTTTTTTTTTTCTTCAATGGTATGTACATTGGTATACTTCGGA
TCATATGAAGTGGAGAAAAATTCAAGACCACGATGTGCCAGTGCGACGTT
GCCCCGGTATGGTGGAGATCGTATCTTCTGCAACAAGCGCCCTAGCGGCT
GACCCCGATGCCAGCTGGAGTGCGGACTTCGACCTGGTGGTCCAACAGGT
AAAGACGATATAGTGGTCGGTATTGTTGTTGTTGTTGTTGTTGTTGTTGT
TGCTGTTGTTGTTGTTGTTGTTGTTGTTCTTGTTCTTGTTTTTGTTCTTG
TTCTTCTTGTTCTTCTTGTTCTTCTTGTTCTTCTTGTTCTTCTTGTTGGC
GGTGGCGGTGGCGGTAGTTGTGGAGATGTTGTTGCTGCTGCTGCTGCTGC
TGCTTCTTGTGGTTACGGTGGTTGTTGTTGTCGCCACTGGTTTCTGTCGA
CGTCGATATCGTTGGCCGTTGAAGTCTCAGCACCACTGCCGTTTTTTGTT
GAATCGCGCTTCAGCACATGAAGCTACGGCCCATGTCTTTTTGGGTAACT
GCTACCCGCGCTGGTGCCGTTTCGACGTAGGATGTCACCACCCCCCCTCC
TTGGGCCGATTATTCTTAGCTTGATTTCTCCACCGCAGAAGTATTTATTT
CCGAGCTCGACCATTTCTCAACAGGAACACGATTGCTGTTGTGTCGCTGT
GAAGGACGGTCTGTTGTAGAGTCCAAAGCTTCCCGGAAACGCCTCGTTTC
GATGTCCGTCGTCATGATACTACTGACTGTGGTGTCTTTTGTTGCGGGGT
AACCGACCTCTGGAAAGCGGCCGAGGGGGTCCCGTGGTATCTTGCGCTAG
TGTTCCGCCACGCTACTACGTAGTGCCAGTATCTCAAGAGTCGTTGCCCC
CCTACATTCACGCTGGATGTGACGTAGGAAAGTTGAACAACATTTGTACA
TGGCAAACGCGACAAAGACCGCTACAATACAGCAATGTACCAGGTACCAG
ATGAGTGGTGGCCACACAAAATGTCAAACAGGAGAAGGAGACAACACTGT
GTGTGCAAATACATTCCTCATGTTAGATGTCGCAAATGTGGGCTTGGCGG
TGACTGTGTTCGGGTACGAACGGTGCTTCGTGTCGGAAAGGACGCATGGT
CGATCGTCGTATGACCAAGGCAAGCAATAAATGAGTAACGCCCGCCCCCC
CCACGCCTACGGCTTTCCCCTTTCCTCCCCTATAACCGTCTTGAAACGAA
TGCGTGGCCGATGGTCAAACGACAAAGGCACGCAACAAACAAGTAACCCC
CCACTTCCCCCGCCCCTGCCCAATAACCGCTGTTTCCGATGAAATCACGC
CGATCGAACCAAATTCAACAAACACCCGGTTCATGATGGGCATCACGCCC
CGGGTCTCTGCTGATCGCTTCTTCGATGAAGGTTGTCCCGCACATCAACG
GGGTCAAGCATGTGAAAAAGATTTCGCGCGACTCTCAGGTGTGCACGCTC
GGAGCATGAATTGCTATGGACATACGTGGTATAGTTTTTGCTGTCCATAA
ACCAGGTGCATCTTTTGTACATTCCTCCATGTTTTTGCTGATTGTTACGA
TATAAATTTGAATGTTTTTGTGTCTTTTGTTTTGTACCCGTGCAAGTATT
TCGTCTCTTCTGCTGTGTTTTTATTTTTATATTCGCTTTTTGATGTTTTG
GCGTGTATACCGTGCCCGGTCTTGTATTGTTCCAGATTATTTTCAGTTCA
TGTTGAAGCATGTTTTTTATGTCTGAATGAAGCCCAGATCAAAGTACAGC
AGGACGCCATCATACAAAAGAAGACATCGCGCACAGAAACTCAAAATAAA
GGTATACAAGGGAACATCATACATACAAGCCTAAATACGGTACGACTGTT
CAGGACGCCGGTATTCAAGAAGCGCCATACACAAGATCCTGAAATATCGT
ACTTCAAAGTATGACACAATATTTCACACCGCATCATACAATGATCGTCA
TACATACAAGTTCGTAAAGCCTAGGCGTAAGGTACAGCAGCAGAGGACAG
CGTTGCACAAGAAGCGTCATACGAAAAGTCCTCGAATATGGTACTACGAG
GGTTGATTTCCAGGCGGAAACGCCCTTCCCTGGCGAAAGGCCTCGTTGTT
TGTCGTTCCTCGCCCCTCGTATCTCCCGAGAGTCTCATCAAGCAAGTTGT
CGGCGTGTTGCTGTTCGCTAAACACGTTAGTAGTGTAAACAATAGATAAA
AAGAGAACGAAAGCCTTTAAGTAAGGAAGAAAGGGGACCTTCCTCCCGTA
TGACCCTGGCTGAACGTCAAGAATATCACGATATTACCGAAAGGTGTATA
GACTGTCGCCAGAATAATTGGGACGACCACGCACACACCCTAAGCGGGCT
AGAGTACTCGCTCTTGACCGAACAATTCGCTCTCAATCTCGTGGAACCCG
CGGAGCAGGTAGAGATCGCCGCCGTCAAGAAGGCCCTGCAGTGGGTACTG
TACACCAACCAGATCCTGCTGACGGACGTGTTCCGGTACTGCAACGTTTA
CGTCCAGACGACAAAAACTGCAGGCAAGTTTCTGGTCGACAGTCCCGCTG
ACAGTGCCGTCGCTGTGTACTGTTTGCTCACTGCCGCCCGTACCATCTTC
AACTGTGTTTTCGGCCACTTCTTCAGGCTGTGCATTACAACTTTGAAGCG
TGCTTGCTTTGCGCCGCCTCCATTAGTTTTTTTTTTGTTTGGAATATTCC
AAATAGATGATTTGGATTGCAGCTGTGGCGTCGTGTGGTTTTGCGTGTCC
CGCGATAACTTTACGTGTATTGCGTGTTTTGTCATCTACGAAGTAAACTG
AAATCAACCACAGAAGTGTTTTGTGTCATCCATCCTGAATTTAGTTTTTT
GTGTTCCCCATGCCAACTTTAAGTGTTTTCTGTCATTCGTAGTACGGCCA
AATGTCAAGGGTTTTGTGCCCTCCGCCTTGACTACATCATCAACGTGGAC
GCGCTTTCGTATTCCGAAAAATTAATGAAAAATAGAGTACACTCGGCGGC
CCGACTTCAGGGAGGCGTGCTGGGAGCGGATCGCCAAGCCGACTCCTGTT
GTCGTCGTAGCCGTTTCAGAAAACGCCTCCTCCATCGGGGAAGAGAGCGA
GGGTCGCCAGCGCGGAGGTGTGTGGATTCTTTCTAGCAAGTACGATGGGG
CGGCCCGAATACCACACTTTGAAGGACGCGCTGGTGCAGCTGCTGCTGCT
GCTGCTGCTGCTGTGCGTGTGTGCGATATGAAATGTGCACGCATGTATGT
TTATTTTTCTGTTGACAAGAGATCCGAAACCCCGTTCGCTCTTGGTGTCA
CTTTACATCTAAACGTCTGACTCTTTCGAGGCGCGTCGCGTCGTTGACGT
GCTCGGCCATTTTTCGCATCGTCTTTCCCTGGCTGCCGGCAACATGGACC
GCTCAAAGATCTCCCCCTCTTGTGGATTTGAACTTACCAAACCGAGAACG
AAAAGGCAGACTATCCGTTCATACTCTAAAGATCCAAAATACATGCTTCG
TCGTAGTTTTCGGCGGGTCTCCTCATCATGCAGCACAAGATGTACATGAT
GCTCCGAAGTTGTGACATGTGTGCGTGGTGTGGTTGTGTATATGTATGTA
CCTGCGCATGTGTGTGGGTGTACGTGTATGATACGGCGCGGGAATGTACC
ATTGTACCATGTTATGTGGGACAAATTGCTCGTACAATGGGTGAAATATG
TGGCGTTTTTCTGTTTTTGTATGATTTTTTGTTTTTGCTATAGACATGAG
GTGTGCTGTTTCTGGCCAAAAAAATAAAAGGAGGCTTGAAACTGATGGGA
CGGCTTTCTTGTTTTTGCCTTAAGGAACGGCGAAAGCGCTTTCGGTGGTG
GAGAGGACAAGGGATGATGAAAGTATGATAATCCCGCCAACCTCAACCCC
GTGCTTACCGCCATTCATCGTCACGATTTCGCTTTTATCATATGGGTACC
ATGGTATGGGAAATTTACTCGTAGTAGGCTTGAAACTGAGGTTCATATTC
TTTTAATGATTATCGTGGTTTTGTTGTGCACATGAGGGGTAAACTGACTC
TAGTGTATAGGGGAAACACGCCTGGTTCGGTGAAGAGGGCGAGAGATGTT
GGCGAAAGACGAATATCTCGCCGACTCCACCCATGCTTGCTGTCATATAT
CGTCACAATTTCCGCGACTGCATTTTTTTTCAAAATTATCGTACAACACA
ACACATTGTTTTCCGACGCTACAGTAGTATCCGTGTTCTTCTCGCTATTT
CGCCGACCCCGCCGGTGCTTACCGTCAACCATAGTCACACTTTTGCGGCT
CTACACGATGATATTTCTCAATGGCATGCACATTCTTCAGACGCAATGCG
TTTCTTTTGCTCGCTTATATCATGTGCGACATGTAACTGTCACAAACGCC
TGCATATTGCGTAAACACATCATATGATATCATAGGGTCTGCACAAGAGA
CGATGCCTCTCAACGGAGATGGAGAAGCATCACGACCAGCAGGAGCAGCA
GCGGCAGTAGGGGAATTCGACTGGGGAGGCACCGAGACGGAAACGGGGAC
AATACCGGATGCACCCCACCCCATGGCTCTGACAAGGCTCTACGCCAGCT
TTCAGTGCGACCGATGTGTCATGGACGTGCTGAGGATAGCCGAAGGGCCG
GAAGGTTTCGTGGAGCAGTTCGACCACAGACGGTGCGGATTCCATTCCAG
ATTGTATTCCGCGAGTAGAAACGCAGCACGTGCAACAAAGCGCTGAAAAG
CGTGAAGCCGATGTGATGCTCCACTGTTCTGGTTCCACGGTTACAGTACC
TCGTAGCAACACGCAGCACTCAGCACTTTTGACACACGAAGCCCGATCAC
TGATCAGGCAGCAGCTAGCCTGCGTCGCGCGTCGCCCATCGTTGTTGAAA
TTTTTGCCCTCCGTGAGAGTTCACTTTTTTTTCATCACGAAATTTGAAAG
GATCGCCTGACCGAGGCGTGACCCGGCCGGGTGAGTTTTAACCCTTCCAC
CGAGGCTTCGTCCCTCGTCAAAGAAAGTCCTGAACCCAAACGTTACAAAT
GTTAAAAAGAGCACCCAAATGATGGTGGTGACTTCATGAGGAAGAAATAA
ATGCTGTGCTCCGCCTCGAAAGGAACTAGTGGTCGATGGTCAAATGACTG
CTGCAAGGCTGATGCAAATTAGCACGCCCCCCCACCCCCAACAGACCTCC
CTCCCAATTTCTGTCTCCAAAAGGATTTGGGGTCCACGATCAAATACCTA
CGGTAAGGCAGGCAGATGAGGACCACCCTTCCCCCTCCCCCCTTTTAGAA
GCCTGTCCCGGCGAACACCCGCGTGCTCCGTCCCGGCTGTGGAGAGATGC
GAGGCGTAAAGGTCATAATGAATAGAGAGTAGCTTGAGTGGACCTGCCGG
AAAAAGGCGTGCTCCGTCCCAGCTTTGTAACGGTTCGTCAACGTTTCACT
GATACGAGGGAAACATGAAAAATACAACCCAATTGAGCCCCTTTCCCCCG
CATCCGCCCCCTCCCCGCTTCCTCCTGGATTTAACTCCCTGAAACCAACT
TCGTTCAGGATGTGCTCTTTTGGCGTAGAGGTGGGCATCCTGCGGCGACT
ACACTGCACCCCTTTGTGCGTGCGAGCGGAAGGGAAGGAGGCGACGGCAC
GGCGAGCGGCCATGAGGCACACCAACTACCCACGGCAGTCACTGGTGAGC
ACCACCAGACTCGTTGTCCATCCAGCCTACAAATACGTACCCGGTAAATG
CACGGATGTCTCGAGCAGTTTTGTTGCCGGTGCCAACATTACACCACTGC
GTACGCATCATACCATTGCAAAACGGCACGTCTATCATTGCTTTAGTGTT
GATGTTTGTGGATGTTCATCTGATCAAACACTACTTCGTATTCACTGGCT
GGTATATCAACCAATTTTGTTGGGGAACTGGTAGAATGATAGAGGCAGCG
AGGCACACCGACTATCAACGGCAACCTGGTGACACCGCCAAAATATTTGA
CCAGTCCAAGCACGTGGCCGGAACGGGTGTTTCTTGCAGTCTGTTGCCGG
TTTTACCAATGAGCCACTGCGGCATGTTATGTCACGTTCCCATCATGACT
GTTTTTTTTTTGTTCGGGGGGTAGGATGAGAGACAGGACACGCTTATTGC
ACACCAACTATCTATTGCAAACATTTGTAAACACGACGAAGTTTCGTGAA
TTACACGTAAGCTGACCCAAAAACAACGACCATCGATAACAACAATAGCA
GCTACTTTTGTAGCGACAACAGCAACACCATCATCCAACCGCTAAGACAA
GCAACTATCCCGAAAAACCACTGATGAACTGCGTGCACTTTTTTACACGC
ACGAACAACCACTCCAATCATCAGGGGGGTCGCCATGACCTGGAGTACGT
GCAGAAGCTGCTGAACGGCCAAAGAACGGAGGACGCTCTGTGCTGCTTCC
TGTACTGCTCCCCGCAGGAGCTCACCGACTTCGCCGCAAGCGACGGGAGC
AAGGTCTACCGACATTACCCCTTCTGA back to topCoding sequence (CDS) from alignment at P-littoralis_Contig187:105576..117852+ >mRNA_P-littoralis_Contig187.10.1 ID=mRNA_P-littoralis_Contig187.10.1|Name=mRNA_P-littoralis_Contig187.10.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1668bp|location=Sequence derived from alignment at P-littoralis_Contig187:105576..117852+ (Pylaiella littoralis U1_48)
ATGCCAGCAACGGCAACAACGGCCGCAGCAGCAGAACAAGAAGAGGAGAG
CGAGGAATGTCCCCTGGCCGCAATCTTCTACGCGGAATTCGACAACGTCA
GCGGCGAGAAGCTCGTCCACCAGTATCCCCCAGAGAAGTTTACGCAGTCG
CACTACAACATGCTGTCCTCTCACATCATCTGCGACAAAGGTTTCTGCGA
GAAGGTCACCGTGGTTGATTCCATGGCCATCCCGTGGACCCTGGCCTCCT
TCCCTTCCTCGATCGAAGACGACAAGGTACCAGACAAGTACGACCGGGTC
GTCTTCAGGTACAACATTAGCTTTGTCTTCAAGAAGGGGCATTCCACGGG
GCCGAGGTCCCCGTACGACAAGGAACCGTTCGTTAAGGTTCTTGAGCGCT
TCGGGTGGTGGTTGCGAGAAATGGAGCTCAGATTCGGGTATCTCTACGGT
GACAGGAGCAAGAAAAAGGTCCGATTGGTGCGGTTGCGCGAGTGCTTGAC
GCGGGCCTACAAGGGCATGAAAAAAGATCGTCGGGCCTGGCTCATGATGA
CGGGACCGGGCTGTCCCTCCATAATGCCCCTGCTGCAGCCGTATCTGGCG
TCAACCCCCCTGAAGAATTGGAGAAAAATTCAAGACCACGATGTGCCAGT
GCGACGTTGCCCCGGTATGGTGGAGATCGTATCTTCTGCAACAAGCGCCC
TAGCGGCTGACCCCGATGCCAGCTGGAGTGCGGACTTCGACCTGGTGGTC
CAACAGGTTGTCCCGCACATCAACGGGGTCAAGCATGTGAAAAAGATTTC
GCGCGACTCTCAGCAGGTAGAGATCGCCGCCGTCAAGAAGGCCCTGCAGT
GGGTACTGTACACCAACCAGATCCTGCTGACGGACGTGTTCCGGTACTGC
AACGTTTACGTCCAGACGACAAAAACTGCAGGCAAGTTTCTGTACACTCG
GCGGCCCGACTTCAGGGAGGCGTGCTGGGAGCGGATCGCCAAGCCGACTC
CTGTTGTCGTCGTAGCCGTTTCAGAAAACGCCTCCTCCATCGGGGAAGAG
AGCGAGGGTCGCCAGCGCGGAGGTGTGTGGATTCTTTCTAGCAAGTACGA
TGGGGCGGCCCGAATACCACACTTTGAAGGACGCGCTGGTGCAGCTGCTG
CTGCTGCTGCTGCTGCTGTGCAAGCATCACGACCAGCAGGAGCAGCAGCG
GCAGTAGGGGAATTCGACTGGGGAGGCACCGAGACGGAAACGGGGACAAT
ACCGGATGCACCCCACCCCATGGCTCTGACAAGGCTCTACGCCAGCTTTC
AGTGCGACCGATGTGTCATGGACGTGCTGAGGATAGCCGAAGGGCCGGAA
GGTTTCGTGGAGCAGTTCGACCACAGACGGATGTGCTCTTTTGGCGTAGA
GGTGGGCATCCTGCGGCGACTACACTGCACCCCTTTGTGCGTGCGAGCGG
AAGGGAAGGAGGCGACGGCACGGCGAGCGGCCATGAGGCACACCAACTAC
CCACGGCAGTCACTGGGGGGTCGCCATGACCTGGAGTACGTGCAGAAGCT
GCTGAACGGCCAAAGAACGGAGGACGCTCTGTGCTGCTTCCTGTACTGCT
CCCCGCAGGAGCTCACCGACTTCGCCGCAAGCGACGGGAGCAAGGTCTAC
CGACATTACCCCTTCTGA back to top
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