mRNA_P-littoralis_Contig186.146.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig186.146.1 vs. uniprot
Match: A0A6H5JRU6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRU6_9PHAE) HSP 1 Score: 267 bits (683), Expect = 6.430e-83 Identity = 162/328 (49.39%), Postives = 191/328 (58.23%), Query Frame = 2
Query: 20 NGTSDDCNCHDCKCAQFVDGTRVNSGVPFNPHDLDAPDGRGNFYLLPDHEVKALYFHDETRTKENDNGSCQWMSNAKCAAIKKKGEGRAAHISSMIGVDSGVSQIGQEAWGMMQRGAGRRFKCVTSRPFREVLRQKGG*G*GRPCD-------QERTGCGQATEAGG-----------------------C*LPGDENQERS----LDSGDNHDGGCEPGRVLDERMCAQILAPFAIHELTSDAHRQLVMVFDNSTGHAAYEAGALLANHIPLRPGGEQVVLDDFEDGNGNLVHTTFRVGDEIRFTTVIYARKTPGQVEAEKHTQAKK 901
N S DC+CHDCK FVD +RV PFN DL A DG+G+F LLPDHEV ALYFHDET KEND+G CQWM K AAIKKKGEGRA H+S +IGVD GV+ IG+EAWGMMQ K V P EV+ Q G G + ER+G + G C + +N R+ + G N DG ++RMC QI AIHELTS+ HR +VMVFDNSTGHAAYE GAL+A+HI +PGG QV+LD F D GNLVH TFR GD + F T +YA KTP Q+E E+ AKK
Sbjct: 67 NWISADCDCHDCKRTPFVDSSRV----PFNRRDLSASDGQGDFCLLPDHEVLALYFHDETTAKENDDGGCQWMDGQKGAAIKKKGEGRAVHVSDIIGVDRGVAVIGKEAWGMMQED-----KSVGYAPAVEVIAQGPATGDGDVPECFVVRQRYERSGIYFGRKEGDGEDGHAVKFVQDAVELLKAMPADCGVTKTKNDPRTGAVIMTVGQNSDG-----YWTNDRMCKQIPGLIAIHELTSEPHRPMVMVFDNSTGHAAYEEGALVASHIQKKPGGGQVILD-FLDDQGNLVHATFREGDTVLFDTHVYAAKTPEQLEEEEREAAKK 379
BLAST of mRNA_P-littoralis_Contig186.146.1 vs. uniprot
Match: A0A6H5K659_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K659_9PHAE) HSP 1 Score: 274 bits (701), Expect = 1.550e-81 Identity = 163/328 (49.70%), Postives = 192/328 (58.54%), Query Frame = 2
Query: 20 NGTSDDCNCHDCKCAQFVDGTRVNSGVPFNPHDLDAPDGRGNFYLLPDHEVKALYFHDETRTKENDNGSCQWMSNAKCAAIKKKGEGRAAHISSMIGVDSGVSQIGQEAWGMMQRGAGRRFKCVTSRPFREVLRQKGG*G*GRPCD-------QERTGCGQATEAGG-----------------------C*LPGDENQERS----LDSGDNHDGGCEPGRVLDERMCAQILAPFAIHELTSDAHRQLVMVFDNSTGHAAYEAGALLANHIPLRPGGEQVVLDDFEDGNGNLVHTTFRVGDEIRFTTVIYARKTPGQVEAEKHTQAKK 901
N S DC+CHDCK FVD +RV PFN DL A DG+G+F LLPDHEV ALYFHDET KEND+G CQWM K AAIKKKGEGRA H+S +IGVD GV+ IG+EAWGMMQ K V P EV+ Q G G + ER+G + G C + +N R+ + G N DG ++RMC QI AIHELTS+ HR +VMVFDNSTGHAAYE GAL+A+HI +PGG QV+LDDF D GNLVH TFR GD + F T +YA KTP Q+E E+ AKK
Sbjct: 327 NWISADCDCHDCKRTPFVDSSRV----PFNRRDLSASDGQGDFCLLPDHEVLALYFHDETTAKENDDGGCQWMDGQKGAAIKKKGEGRAVHVSDIIGVDRGVAVIGKEAWGMMQED-----KSVGYAPAVEVIAQGPATGDGDVPECFVVRQRYERSGIYFGRKEGDGEDGHAVKFVQDAVELLKAMPADCGVTKTKNDPRTGAVIMTVGQNSDG-----YWTNDRMCKQIPGLIAIHELTSEPHRPMVMVFDNSTGHAAYEEGALVASHIQKKPGGGQVILDDFLDDQGNLVHATFREGDTVLFDTHVYAAKTPEQLEEEEREAAKK 640
BLAST of mRNA_P-littoralis_Contig186.146.1 vs. uniprot
Match: A0A6H5K527_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K527_9PHAE) HSP 1 Score: 258 bits (658), Expect = 5.940e-75 Identity = 153/311 (49.20%), Postives = 180/311 (57.88%), Query Frame = 2
Query: 20 NGTSDDCNCHDCKCAQFVDGTRVNSGVPFNPHDLDAPDGRGNFYLLPDHEVKALYFHDETRTKENDNGSCQWMSNAKCAAIKKKGEGRAAHISSMIGVDSGVSQIGQEAWGMMQRGAGRRFKCVTSRPFREVLRQKGG*G*GRPCD-------QERTGCGQATEAGG-----------------------C*LPGDENQERS----LDSGDNHDGGCEPGRVLDERMCAQILAPFAIHELTSDAHRQLVMVFDNSTGHAAYEAGALLANHIPLRPGGEQVVLDDFEDGNGNLVHTTFRVGDEIRFTTVIYA 850
N S DC+CHDCK FVD +RV PFN DL A DG+G+F LLPDHEV ALYFHDET KEND+G CQWM K AAIKKKGEGRA H+S +IGVD GV+ IG+EAWGMMQ K V P EV+ Q G G + ER+G + G C + +N R+ + G N DG ++RMC QI AIHELTS+ HR +VMVFDNSTGHAAYE GAL+A+HI +PGG QV+LDDF D GNLVH TFR GD + T +YA
Sbjct: 781 NWISADCDCHDCKRTPFVDSSRV----PFNRRDLSASDGQGDFCLLPDHEVLALYFHDETTAKENDDGGCQWMDGQKGAAIKKKGEGRAVHVSDIIGVDRGVAVIGKEAWGMMQED-----KSVGYAPAVEVIAQGPATGDGDVPECFVVRQRYERSGIYFGRKEGDGEDGHAVKFVQDAVELLKAMPADCGVTKTKNDPRTGAVIMTVGQNSDG-----YWTNDRMCKQIPGLIAIHELTSEPHRPMVMVFDNSTGHAAYEEGALVASHIQKKPGGGQVILDDFLDDQGNLVHATFREGDTVLLDTHVYA 1077
BLAST of mRNA_P-littoralis_Contig186.146.1 vs. uniprot
Match: A0A6H5KH16_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH16_9PHAE) HSP 1 Score: 241 bits (615), Expect = 1.220e-74 Identity = 148/298 (49.66%), Postives = 180/298 (60.40%), Query Frame = 2
Query: 80 TRVNSGVPFNPHDLDAPDGRGNFYLLPDHEVKALYFHDETRTKENDNGSCQWMSNAKCAAIKKKGEGRAAHISSMIGVDSGVSQIGQEAWGMMQ----------------RGAGRRFKCVTSRPFREVLRQKGG*G*GRPCDQERTGCG-----QATEA-----GGC*LPGDENQERS----LDSGDNHDGGCEPGRVLDERMCAQILAPFAIHELTSDAHRQLVMVFDNSTGHAAYEAGALLANHIPLRPGGEQVVLDDFEDGNGNLVHTTFRVGDEIRFTTVIYARKTPGQVEAEK 883
T + VPFNPHDL DGRG+F L+PDHEV ALYFHDET KEND+GS QW+S K AAIKKKGEGRAAHIS +IGVD GV+ IG+EAWGMMQ R A + + T R F ++ G GR + + G A E G C + +N + + G DG R+L+ QI AIHELTS+ HRQLVMVFDNSTGH+A+ AGAL+ H+ LRPGG Q L +FED GN VHTTFRVGD++RFTT ++A KT ++EAEK
Sbjct: 6 TNTSLRVPFNPHDLLGRDGRGDFCLVPDHEVLALYFHDETTAKENDDGSNQWVSVLKGAAIKKKGEGRAAHISDIIGVDRGVAAIGKEAWGMMQEDMNVVEDKENPVEVARPAPKDGEAPTHRVFPGRY-ERSGIYFGRKEGEGKDGHAVKLVQDAVELLKGIPGACQVKKTKNDSSTAAVIMTVGQYQDGYWNCARMLE-----QIPGLIAIHELTSEPHRQLVMVFDNSTGHSAFGAGALVGEHVALRPGGAQGALRNFEDDEGNPVHTTFRVGDKLRFTTNVFAPKTEEELEAEK 297
BLAST of mRNA_P-littoralis_Contig186.146.1 vs. uniprot
Match: A0A6H5L669_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L669_9PHAE) HSP 1 Score: 244 bits (624), Expect = 1.660e-71 Identity = 151/311 (48.55%), Postives = 181/311 (58.20%), Query Frame = 2
Query: 38 CNCHDCKCAQFVDGTRVNSGVPFNPHDLDAPDGRGNFYLLPDHEVKALYFHDETRTKENDNGSCQWMSNAKCAAIKKKGEGRAAHISSMIGVDSGVSQIGQEAWGMMQRG------------AGRRFKCVTSRPFREVLR---QKGG*G*GRPCDQERTGCG-----QATEA-----GGC*LPGDENQERS----LDSGDNHDGGCEPGRVLDERMCAQILAPFAIHELTSDAHRQLVMVFDNSTGHAAYEAGALLANHIPLRPGGEQVVLDDFEDGNGNLVHTTFRVGDEIRFTTVIYARKTPGQVEAEK 883
C C DCK F +RV PFNP DL DGRG+F L+PDHEV ALYFHDET KEND+GS QW+S K AAIKKKGEGRAAHIS +IGVD GV+ IG+EAWGMMQ R P V ++ G GR + G A E G C + +N + + G + DG R+L+ QI AIHELTS+ HRQLVMVFDNSTGH+A+ AGAL+ H+ LRPGG Q L +FED GN VHTTFRVGD++RFTT ++A KT ++EAEK
Sbjct: 169 CECRDCKRKPFDSSSRV----PFNPRDLLGRDGRGDFCLVPDHEVLALYFHDETTAKENDDGSNQWVSVLKGAAIKKKGEGRAAHISDIIGVDRGVAAIGKEAWGMMQEDMNVVEDKENPVEVARPAPTDGEAPMHWVFPGRYERSGIYFGRKEGEGNDGYAVKLVQDAVELLKGIPGACQVKKTKNDPSTAAVIMTVGQHQDGYWNCARMLE-----QIPGLIAIHELTSEPHRQLVMVFDNSTGHSAFGAGALVGEHVALRPGGAQGALRNFEDDEGNPVHTTFRVGDKLRFTTNVFAPKTEEELEAEK 470
BLAST of mRNA_P-littoralis_Contig186.146.1 vs. uniprot
Match: A0A6H5JJ42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ42_9PHAE) HSP 1 Score: 249 bits (635), Expect = 2.880e-71 Identity = 154/313 (49.20%), Postives = 180/313 (57.51%), Query Frame = 2
Query: 35 DCNCHDCKCAQFVDGTRVNSGVPFNPHDLDAPDGRGNFYLLPDHEVKALYFHDETRTKENDNGSCQWMSNAKCAAIKKKGEGRAAHISSMIGVDSGVSQIGQEAWGMMQRGAGRR---FKCVTSRPFRE-----------VLRQKGG*G*GRPCDQERTGC-GQATE------------AGGC*LPGDENQERS----LDSGDNHDGGCEPGRVLDERMCAQILAPFAIHELTSDAHRQLVMVFDNSTGHAAYEAGALLANHIPLRPGGEQVVLDDFEDGNGNLVHTTFRVGDEIRFTTVIYARKTPGQVEAE 880
DC C+DCK FV V+S VPFN DL A DG G+F L+PDHEV +LYFHDET KEND+G CQWMS K AAIKKKGEGRA H+S +IGVD GV+ IG+EAWGMMQ V P E + + G GR QE G G A + C + EN + + G N DG +ERMC QI AIHELTS+ HR LVMVFDNSTGHAAYE AL+A+HI PGG Q +LDDF D GNLV TTFR GD++ F +YA KTP Q++AE
Sbjct: 743 DCACYDCKRTPFV----VSSRVPFNRRDLSASDGLGDFCLVPDHEVMSLYFHDETTAKENDDGGCQWMSIEKGAAIKKKGEGRAVHVSDIIGVDRGVAVIGKEAWGMMQEDMDVLEDVVDLVEVEPATEDGEAPKHGASTLYNGRSGIYFGR---QEGDGVDGHAVKFVQDAVKLLKAMPDDCGVTKTENDPSTGAVIMTVGQNQDGFWN-----NERMCKQIPGLIAIHELTSEPHRPLVMVFDNSTGHAAYETSALVASHINKGPGGGQAILDDFLDDEGNLVRTTFRAGDKLLFKAQVYAAKTPEQLKAE 1043
BLAST of mRNA_P-littoralis_Contig186.146.1 vs. uniprot
Match: A0A6H5KS65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS65_9PHAE) HSP 1 Score: 232 bits (592), Expect = 2.120e-69 Identity = 144/297 (48.48%), Postives = 173/297 (58.25%), Query Frame = 2
Query: 38 CNCHDCKCAQFVDGTRVNSGVPFNPHDLDAPDGRGNFYLLPDHEVKALYFHDETRTKENDNGSCQWMSNAKCAAIKKKGEGRAAHISSMIGVDSGVSQIGQEAWGMMQ----------------RGAGRRFKCVTSRPFREVLRQKGG*G*GRPCDQERTGCG-----QATEA-----GGC*LPGDENQERS----LDSGDNHDGGCEPGRVLDERMCAQILAPFAIHELTSDAHRQLVMVFDNSTGHAAYEAGALLANHIPLRPGGEQVVLDDFEDGNGNLVHTTFRVGDEIRFTT 838
C C DCK F +RV PFNP DL DGRG+F L+PDHEV ALYFHDET KEND+GS QW+S K AAI KKGEGRAAHIS +IGVD GV+ IG+EAWGMMQ R A + + T R F ++ G GR + + G A E G C + +N + + G + DG R+L+ QI AIHELTS+ HRQLVMVFDNSTGH+A+ AG L+ H+ LRPGG Q L +FED GN VHTTFRVGD++RFTT
Sbjct: 151 CECRDCKRKPFDSSSRV----PFNPRDLLGRDGRGDFCLVPDHEVLALYFHDETTAKENDDGSNQWVSVLKGAAINKKGEGRAAHISDIIGVDRGVAAIGKEAWGMMQEDMNVVEDKENPVEVARPAPKDGEAPTHRVFPGRY-ERSGIYFGRKEGEGKDGHAVKLVQDAVELLKGIPGACQVKKTKNDPSTAAVIMTVGQHQDGYWNCARMLE-----QIPGLIAIHELTSEPHRQLVMVFDNSTGHSAFGAGTLVGEHVALRPGGAQGALRNFEDDEGNPVHTTFRVGDKLRFTT 437
BLAST of mRNA_P-littoralis_Contig186.146.1 vs. uniprot
Match: A0A6H5K550_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K550_9PHAE) HSP 1 Score: 204 bits (518), Expect = 6.770e-56 Identity = 129/294 (43.88%), Postives = 162/294 (55.10%), Query Frame = 2
Query: 38 CNCHDCKCAQFVDGTRVNSGVPFNPHDLDAPDGRGNFYLLPDHEVKALYFHDETRTKENDNGSCQWMSNAKCAAIKKKGEGRAAHISSMIGVDSGVSQIGQEAWGMMQRG-----AGRRFKCVTSRPFREVLRQKGG*G*GRPCDQERTGCGQATEAGGC*LPGDENQERS----LDSGDNHDGGCEPGRVLDERMCAQILAPFAIHELTSDAHRQLVMVFDNSTGHAAYEAGALLANHIPLRPGGEQVVLDDFEDGNGNLVHTTFRVGDEIRFTTVIYARKTPGQ--VEAEKH 886
C C+DC D T+V PF+ DL A DG+G++ LLPDHEV +L FHDET TKEND+G QW+S K AA+K KG+GRAAH+S +IGVD G QI ++AWGMMQ G R S + +G G QE T A C + N R+ + G DG +RMCAQ+ A A ELT+ HRQ V +FDNSTGH AY+ ALLA+ I L PGGE+ L FED NG +VH TF+ GD + I+ KTP Q ++ KH
Sbjct: 383 CECYDCSREPVFDSTQV----PFDQRDLIATDGKGDYRLLPDHEVLSLLFHDETTTKENDDGDHQWISATKGAAMKVKGQGRAAHVSDVIGVDLGQLQISEQAWGMMQEDYDVLEGGERPTRGRSGKYLGRTEGEGATGHKVKEVQEAVDLLNKTAAD-CEVLKTANDPRTAVVIMTVGKQQDG-----YWTSDRMCAQLPAALATFELTNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKTALRVFEDDNGRMVHPTFQDGDTLLTDKKIFLPKTPEQKKIKGRKH 666
BLAST of mRNA_P-littoralis_Contig186.146.1 vs. uniprot
Match: A0A6H5JJM4_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJM4_9PHAE) HSP 1 Score: 199 bits (507), Expect = 1.930e-54 Identity = 123/282 (43.62%), Postives = 157/282 (55.67%), Query Frame = 2
Query: 38 CNCHDCKCAQFVDGTRVNSGVPFNPHDLDAPDGRGNFYLLPDHEVKALYFHDETRTKENDNGSCQWMSNAKCAAIKKKGEGRAAHISSMIGVDSGVSQIGQEAWGMMQRGAGRRFKCVTSRPFREVLRQKGG*G*GRPCDQERTGCGQATEAGG-C*LPGDENQERS----LDSGDNHDGGCEPGRVLDERMCAQILAPFAIHELTSDAHRQLVMVFDNSTGHAAYEAGALLANHIPLRPGGEQVVLDDFEDGNGNLVHTTFRVGDEIRFTTVIYARKTPGQ 868
C C++C VD T++ PF+ DL A DG+G++ LLPDHEV +L FHDET KEND+G QW+S K AA+K KGEGRAAHIS +IGVD G QI +E WGMMQ T R + R +G + + +A C + N R+ + G HDG +RMCAQ+ A A+ EL++ HRQ V +FDNSTGH AY+ ALLA+ I L PGGE+ L FED NG VH TF+VGD + I+ KT Q
Sbjct: 338 CECYNCMRKPGVDSTQL----PFDQRDLIATDGKGDYRLLPDHEVLSLLFHDETTAKENDDGDHQWLSADKGAAMKVKGEGRAAHISDVIGVDLGQLQISEEVWGMMQEDK----DAGTERSGKYFGRTEGEGEDSHKVKEIQDAVKVLKKAAADCEVLKTANDPRTAAVIMTVGKQHDG-----YWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKIFLPKTEAQ 606
BLAST of mRNA_P-littoralis_Contig186.146.1 vs. uniprot
Match: A0A6H5KE66_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE66_9PHAE) HSP 1 Score: 181 bits (458), Expect = 1.200e-48 Identity = 114/258 (44.19%), Postives = 144/258 (55.81%), Query Frame = 2
Query: 38 CNCHDCKCAQFVDGTRVNSGVPFNPHDLDAPDGRGNFYLLPDHEVKALYFHDETRTKENDNGSCQWMSNAKCAAIKKKGEGRAAHISSMIGVDSGVSQIGQEAWGMMQRGAGRRFKCVTSRPFREVLRQKGG*G*GRPCDQERTGCGQA-TEAGGC*LPGDENQERS----LDSGDNHDGGCEPGRVLDERMCAQILAPFAIHELTSDAHRQLVMVFDNSTGHAAYEAGALLANHIPLRPGGEQVVLDDFEDGNGNLV 796
C C DCK VD +V F+ DL + DG+G++ LLPDH+V +LYFHDET KEND+G QW+S K A +K KGEGRAAHIS +IGVD G QI +EAWGMMQ T R + R++G G + + T A C + N + + G HD +RMCA++ A A+ ELTS HRQ V++FDNSTGH AY ALLA+ I + PGGE+ L FED NGN V
Sbjct: 197 CECDDCKRKPAVDSAQV----AFDKRDLTSTDGKGDYRLLPDHQVLSLYFHDETTAKENDDGDHQWVSTKKGAPMKVKGEGRAAHISDVIGVDLGQLQISKEAWGMMQEDK----DAETGRSGKYFGRKEGEGVHGHEVKEVQDAVEVLKTAAADCAVLETANDPWTAAVIMTVGQQHDR-----YWTSDRMCARLPAIIAMVELTSGPHRQDVLIFDNSTGHNAYGEDALLAHKINMAPGGEKGALRVFEDDNGNTV 441 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig186.146.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig186.146.1 >prot_P-littoralis_Contig186.146.1 ID=prot_P-littoralis_Contig186.146.1|Name=mRNA_P-littoralis_Contig186.146.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=103bp MCAQILAPFAIHELTSDAHRQLVMVFDNSTGHAAYEAGALLANHIPLRPGback to top mRNA from alignment at P-littoralis_Contig186:414806..415709+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig186.146.1 ID=mRNA_P-littoralis_Contig186.146.1|Name=mRNA_P-littoralis_Contig186.146.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=904bp|location=Sequence derived from alignment at P-littoralis_Contig186:414806..415709+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig186:414806..415709+ >mRNA_P-littoralis_Contig186.146.1 ID=mRNA_P-littoralis_Contig186.146.1|Name=mRNA_P-littoralis_Contig186.146.1|organism=Pylaiella littoralis U1_48|type=CDS|length=309bp|location=Sequence derived from alignment at P-littoralis_Contig186:414806..415709+ (Pylaiella littoralis U1_48)back to top |