prot_P-littoralis_Contig186.77.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig186.77.2
Unique Nameprot_P-littoralis_Contig186.77.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length209
Homology
BLAST of mRNA_P-littoralis_Contig186.77.2 vs. uniprot
Match: D7FKU4_ECTSI (Chlorophyll binding protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKU4_ECTSI)

HSP 1 Score: 328 bits (842), Expect = 2.670e-112
Identity = 155/179 (86.59%), Postives = 170/179 (94.97%), Query Frame = 0
Query:    1 MKMSFENELGAQAPLGFWDPLYWLENADQERFDRLRYVEIKHGRISMLAVLGHIVQENVRLPGNLNFDTPFADMPNGLSAISKMGGFGVAQIVIFIGFLELFIMKQKEGSFPGDMSRVNPFEKQWESFDEETKLKKRAIELNNGRAAQMGIFALVVHEVLGGQPYIINNILGEWLSHIF 179
            MKMSFENELGAQ PLGFWDPLYWLE+ADQERFDRLRYVEIKHGRI MLA+LGHI QENVRLPGNLNF+TPFADMPNGL+AISKMG FGVAQIV FIGFLELF+MKQKEGSFPGDMSR+NPFEKQWESFDEETKL+KRAIELNNGRAAQMGIFALV+HE+L G+PYIIN I+G+ + ++F
Sbjct:   39 MKMSFENELGAQPPLGFWDPLYWLEDADQERFDRLRYVEIKHGRICMLAILGHITQENVRLPGNLNFETPFADMPNGLTAISKMGPFGVAQIVAFIGFLELFVMKQKEGSFPGDMSRINPFEKQWESFDEETKLRKRAIELNNGRAAQMGIFALVIHEILDGEPYIINKIVGDTIGNVF 217          
BLAST of mRNA_P-littoralis_Contig186.77.2 vs. uniprot
Match: Q9FEP5_SACLA (Light harvesting protein lhcf3 (Fragment) n=1 Tax=Saccharina latissima TaxID=309358 RepID=Q9FEP5_SACLA)

HSP 1 Score: 311 bits (796), Expect = 1.260e-105
Identity = 150/175 (85.71%), Postives = 162/175 (92.57%), Query Frame = 0
Query:    1 MKMSFENELGAQAPLGFWDPLYWLENADQERFDRLRYVEIKHGRISMLAVLGHIVQENVRLPGNLNF--DTPFADMPNGLSAISKMGGFGVAQIVIFIGFLELFIMKQKEGSFPGDMSRVNPFEKQWESFDEETKLKKRAIELNNGRAAQMGIFALVVHEVLGGQPYIINNILGE 173
            MKMSFENELG QAPLG+WDPLYWLENADQERFDRLRYVEIKHGRI MLA+LGHIVQENVRLPG L+F  D  FADMPNGL A+SKMG  GVAQIVIFIGFLE+F+MKQKEGSFPGDMSRVNPFEKQW+SFDEETKL+KRAIELNNGRAAQMGIF L+VHEV+  QPY+INN+LGE
Sbjct:   17 MKMSFENELGVQAPLGYWDPLYWLENADQERFDRLRYVEIKHGRICMLAILGHIVQENVRLPGMLSFSNDQSFADMPNGLGALSKMGPIGVAQIVIFIGFLEVFVMKQKEGSFPGDMSRVNPFEKQWDSFDEETKLRKRAIELNNGRAAQMGIFGLIVHEVINNQPYVINNLLGE 191          
BLAST of mRNA_P-littoralis_Contig186.77.2 vs. uniprot
Match: D7FIR0_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIR0_ECTSI)

HSP 1 Score: 233 bits (594), Expect = 1.550e-74
Identity = 119/181 (65.75%), Postives = 142/181 (78.45%), Query Frame = 0
Query:    1 MKMSFENELGAQAPLGFWDPLYWL-ENADQERFDRLRYVEIKHGRISMLAVLGHIVQENVRLPGNL--NFDTPFADMPNGLSAISKMGGFGVAQIVIFIGFLELFIMKQKEGSFPGDMSRVNPFEKQWESFDEETKLKKRAIELNNGRAAQMGIFALVVHEVLGGQPYIINNILGEWLSHI 178
            MKMSFE E+GAQAP+G+WDPL  L ++  QERFDRLRYVEIKHGRI+MLA+LGHI  +N R PG L  + D  FAD PNGL+AISK+  +G+ QI +FIGFLE  +M QKEGSFPGDMS +NPFEK+WES+ EE +  KRAIELNNGRAAQMGI  L+VHE +   PY+IN ILG   SH+
Sbjct:   42 MKMSFETEIGAQAPIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRIAMLAILGHITAQNFRFPGMLAPSADLSFADCPNGLAAISKIPLYGLIQIFLFIGFLETKVMLQKEGSFPGDMSLINPFEKEWESWTEEEQATKRAIELNNGRAAQMGILGLMVHEQINNTPYVINEILG---SHV 219          
BLAST of mRNA_P-littoralis_Contig186.77.2 vs. uniprot
Match: A0A6H5JHT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT6_9PHAE)

HSP 1 Score: 231 bits (589), Expect = 8.600e-74
Identity = 114/175 (65.14%), Postives = 140/175 (80.00%), Query Frame = 0
Query:    1 MKMSFENELGAQAPLGFWDPLYWLENADQERFDRLRYVEIKHGRISMLAVLGHIVQENVRLPGNLN--FDTPFADMPNGLSAISKMGGFGVAQIVIFIGFLELFIMKQKEGSFPGDMSRV-NPFEKQWESFDEETKLKKRAIELNNGRAAQMGIFALVVHEVLGGQPYIINNILG 172
            MKMSFE+E+GAQ PLGFWDPL  L +ADQERF+RLRYVE+KHGRI+MLA+ GH+ Q+NVRLPG L+   D  FADMPNG++A+SK+   G+AQI  F+GFLEL +MK  EGSFPGD +   NPF   W++  EET+  KRAIELNNGRAAQMGI AL+VHE L  +PY+IN++LG
Sbjct:   41 MKMSFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNVRLPGMLSNSADLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLG 215          
BLAST of mRNA_P-littoralis_Contig186.77.2 vs. uniprot
Match: A0A6H5JDS8_9PHAE (LHCP protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDS8_9PHAE)

HSP 1 Score: 229 bits (584), Expect = 1.320e-73
Identity = 114/175 (65.14%), Postives = 140/175 (80.00%), Query Frame = 0
Query:    1 MKMSFENELGAQAPLGFWDPLYWLENADQERFDRLRYVEIKHGRISMLAVLGHIVQENVRLPGNLN--FDTPFADMPNGLSAISKMGGFGVAQIVIFIGFLELFIMKQKEGSFPGDMSRV-NPFEKQWESFDEETKLKKRAIELNNGRAAQMGIFALVVHEVLGGQPYIINNILG 172
            MKMSFE+E+GAQ PLGFWDPL  LE+ADQERF+RLRYVE+KHGRI+MLA+ GH+ Q+N RLPG L+   +  FADMPNG++A+SK+   G+AQI  FIGFLEL +MK  EGSFPGD +   NPF   W++  EET+  KRAIELNNGRAAQMGI AL+VHE L  +PY+IN++LG
Sbjct:    1 MKMSFESEIGAQPPLGFWDPLGLLEDADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGSSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLG 175          
BLAST of mRNA_P-littoralis_Contig186.77.2 vs. uniprot
Match: A0A6H5KCX6_9PHAE (LHCP protein n=20 Tax=Phaeophyceae TaxID=2870 RepID=A0A6H5KCX6_9PHAE)

HSP 1 Score: 229 bits (583), Expect = 6.350e-73
Identity = 114/175 (65.14%), Postives = 140/175 (80.00%), Query Frame = 0
Query:    1 MKMSFENELGAQAPLGFWDPLYWLENADQERFDRLRYVEIKHGRISMLAVLGHIVQENVRLPGNLN--FDTPFADMPNGLSAISKMGGFGVAQIVIFIGFLELFIMKQKEGSFPGDMSRV-NPFEKQWESFDEETKLKKRAIELNNGRAAQMGIFALVVHEVLGGQPYIINNILG 172
            MKMSFE+E+GAQ PLGFWDPL  L +ADQERF+RLRYVE+KHGRI+MLA+ GH+ Q+NVRLPG L+   +  FADMPNG++A+SK+   G+AQI  F+GFLEL +MK  EGSFPGD +   NPF   W++  EET+  KRAIELNNGRAAQMGI AL+VHE L  +PYIIN++LG
Sbjct:   38 MKMSFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNVRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILALMVHEELNNKPYIINDLLG 212          
BLAST of mRNA_P-littoralis_Contig186.77.2 vs. uniprot
Match: FCPB_MACPY (Fucoxanthin-chlorophyll a-c binding protein B, chloroplastic n=6 Tax=Phaeophyceae TaxID=2870 RepID=FCPB_MACPY)

HSP 1 Score: 227 bits (579), Expect = 2.490e-72
Identity = 113/175 (64.57%), Postives = 140/175 (80.00%), Query Frame = 0
Query:    1 MKMSFENELGAQAPLGFWDPLYWLENADQERFDRLRYVEIKHGRISMLAVLGHIVQENVRLPGNLN--FDTPFADMPNGLSAISKMGGFGVAQIVIFIGFLELFIMKQKEGSFPGDMSRV-NPFEKQWESFDEETKLKKRAIELNNGRAAQMGIFALVVHEVLGGQPYIINNILG 172
            MKMSFE+E+GAQAPLGFWDPL  L +ADQERF+RLRYVE+KHGRI+MLA+ GH+ Q+N RLPG L+   +  FADMPNG++A+SK+   G+AQI  FIGFLEL +MK  EGSFPGD +   NPF   W++  EET+  KRAIELNNGRAAQMGI AL+VHE L  +PY+IN+++G
Sbjct:   37 MKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGASWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLVG 211          
BLAST of mRNA_P-littoralis_Contig186.77.2 vs. uniprot
Match: FCPD_MACPY (Fucoxanthin-chlorophyll a-c binding protein D, chloroplastic (Fragment) n=2 Tax=Phaeophyceae TaxID=2870 RepID=FCPD_MACPY)

HSP 1 Score: 225 bits (574), Expect = 4.530e-72
Identity = 114/175 (65.14%), Postives = 139/175 (79.43%), Query Frame = 0
Query:    1 MKMSFENELGAQAPLGFWDPLYWLENADQERFDRLRYVEIKHGRISMLAVLGHIVQENVRLPGNLN--FDTPFADMPNGLSAISKMGGFGVAQIVIFIGFLELFIMKQKEGSFPGDMSRV-NPFEKQWESFDEETKLKKRAIELNNGRAAQMGIFALVVHEVLGGQPYIINNILG 172
            MKMSFE E+GAQAPLGFWDPL  L +ADQERF+RLRYVE+KHGRI+MLA+ GH+ Q+N RLPG L+   +  FADMPNG++A+SK+   G+AQI  FIGFLEL +MK  EGSFPGD +   NPF   W++  EET+  KRAIELNNGRAAQMGI AL+VHE L  +PY+IN++LG
Sbjct:    2 MKMSFELEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNARLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFTLGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLG 176          
BLAST of mRNA_P-littoralis_Contig186.77.2 vs. uniprot
Match: FCPF_MACPY (Fucoxanthin-chlorophyll a-c binding protein F, chloroplastic (Fragment) n=1 Tax=Macrocystis pyrifera TaxID=35122 RepID=FCPF_MACPY)

HSP 1 Score: 224 bits (570), Expect = 4.750e-71
Identity = 113/175 (64.57%), Postives = 137/175 (78.29%), Query Frame = 0
Query:    1 MKMSFENELGAQAPLGFWDPLYWLENADQERFDRLRYVEIKHGRISMLAVLGHIVQENVRLPGNLN--FDTPFADMPNGLSAISKMGGFGVAQIVIFIGFLELFIMKQKEGSFPGD-MSRVNPFEKQWESFDEETKLKKRAIELNNGRAAQMGIFALVVHEVLGGQPYIINNILG 172
            MKMSFE+E+GAQAPLGFWDPL  L +ADQERF+RLRYVE+KHGRI+MLA+ GH+ Q+N RLPG L+   +  FADMPNG++A+SK+   G+AQI  FIGFLEL +MK  EGSFPGD +   NPF   W+S   ET+  KRAIELNNGRAAQMGI  ++VHE L  QPYI N++LG
Sbjct:   31 MKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFIIGGNPFASSWDSMSSETQASKRAIELNNGRAAQMGILGMMVHEELSNQPYITNDLLG 205          
BLAST of mRNA_P-littoralis_Contig186.77.2 vs. uniprot
Match: D8LNK6_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNK6_ECTSI)

HSP 1 Score: 229 bits (584), Expect = 5.750e-71
Identity = 114/175 (65.14%), Postives = 140/175 (80.00%), Query Frame = 0
Query:    1 MKMSFENELGAQAPLGFWDPLYWLENADQERFDRLRYVEIKHGRISMLAVLGHIVQENVRLPGNLN--FDTPFADMPNGLSAISKMGGFGVAQIVIFIGFLELFIMKQKEGSFPGDMSRV-NPFEKQWESFDEETKLKKRAIELNNGRAAQMGIFALVVHEVLGGQPYIINNILG 172
            MKMSFE+E+GAQ PLGFWDPL  LE+ADQERF+RLRYVE+KHGRI+MLA+ GH+ Q+N RLPG L+   +  FADMPNG++A+SK+   G+AQI  FIGFLEL +MK  EGSFPGD +   NPF   W++  EET+  KRAIELNNGRAAQMGI AL+VHE L  +PY+IN++LG
Sbjct:  197 MKMSFESEIGAQPPLGFWDPLGLLEDADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGSSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLG 371          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig186.77.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKU4_ECTSI2.670e-11286.59Chlorophyll binding protein n=2 Tax=Ectocarpus Tax... [more]
Q9FEP5_SACLA1.260e-10585.71Light harvesting protein lhcf3 (Fragment) n=1 Tax=... [more]
D7FIR0_ECTSI1.550e-7465.75Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
A0A6H5JHT6_9PHAE8.600e-7465.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JDS8_9PHAE1.320e-7365.14LHCP protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5KCX6_9PHAE6.350e-7365.14LHCP protein n=20 Tax=Phaeophyceae TaxID=2870 RepI... [more]
FCPB_MACPY2.490e-7264.57Fucoxanthin-chlorophyll a-c binding protein B, chl... [more]
FCPD_MACPY4.530e-7265.14Fucoxanthin-chlorophyll a-c binding protein D, chl... [more]
FCPF_MACPY4.750e-7164.57Fucoxanthin-chlorophyll a-c binding protein F, chl... [more]
D8LNK6_ECTSI5.750e-7165.14Light harvesting complex protein n=1 Tax=Ectocarpu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 6..158
e-value: 3.0E-32
score: 112.4
NoneNo IPR availableGENE3D1.10.3460.10Chlorophyll a/b binding protein domaincoord: 5..177
e-value: 7.0E-29
score: 102.9
NoneNo IPR availablePANTHERPTHR21649:SF89CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTICcoord: 4..170
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 2..169
IPR001344Chlorophyll A-B binding protein, plant and chromistaPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 4..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig186contigP-littoralis_Contig186:207557..208725 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig186.77.2mRNA_P-littoralis_Contig186.77.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig186 207472..211171 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig186.77.2 ID=prot_P-littoralis_Contig186.77.2|Name=mRNA_P-littoralis_Contig186.77.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=209bp
MKMSFENELGAQAPLGFWDPLYWLENADQERFDRLRYVEIKHGRISMLAV
LGHIVQENVRLPGNLNFDTPFADMPNGLSAISKMGGFGVAQIVIFIGFLE
LFIMKQKEGSFPGDMSRVNPFEKQWESFDEETKLKKRAIELNNGRAAQMG
IFALVVHEVLGGQPYIINNILGEWLSHIFQQAHFERWPCCAFESYFWQTA
RERFILVK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022796Chloroa_b-bind
IPR001344Chloro_AB-bd_pln