prot_P-littoralis_Contig186.44.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig186.44.1
Unique Nameprot_P-littoralis_Contig186.44.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length230
Homology
BLAST of mRNA_P-littoralis_Contig186.44.1 vs. uniprot
Match: A0A6H5KCX6_9PHAE (LHCP protein n=20 Tax=Phaeophyceae TaxID=2870 RepID=A0A6H5KCX6_9PHAE)

HSP 1 Score: 300 bits (769), Expect = 7.610e-101
Identity = 158/225 (70.22%), Postives = 180/225 (80.00%), Query Frame = 0
Query:    7 VALASVASASAFVAPSAFNGGVVSQQAKASSSSLTMAAKKGPVSSGGNFESALGAQPPLGFYDPAGLLKNADQERFDRLRYVEIKHGRISMLAVAGHLIQQNFRLPGMLSTSADLSFADMPNGLAALSKIPPLGLFQIIAFIGFLEIGVMKQKEGSFPGDMTLGGEPYA--WTKFSDEVKEQKRAIELNNGRAAQMGILGLMMHEAVNNHPYIINDLLGAPYTFN 229
            +ALA  ASA+AFVAPSAFNG  V+  AK SSS++ M           +FES +GAQPPLGF+DP GLL +ADQERF+RLRYVE+KHGRI+MLA+AGHL QQN RLPGMLS SA+LSFADMPNG+AALSKIPP GL QI AF+GFLE+ VMK  EGSFPGD T GG P+A  W   S+E +E KRAIELNNGRAAQMGIL LM+HE +NN PYIINDLLGA YTFN
Sbjct:    6 MALACAASANAFVAPSAFNGAAVATPAK-SSSAMKM-----------SFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNVRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILALMVHEELNNKPYIINDLLGASYTFN 218          
BLAST of mRNA_P-littoralis_Contig186.44.1 vs. uniprot
Match: A0A6H5JHT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT6_9PHAE)

HSP 1 Score: 284 bits (726), Expect = 2.920e-94
Identity = 146/210 (69.52%), Postives = 166/210 (79.05%), Query Frame = 0
Query:   22 SAFNGGVVSQQAKASSSSLTMAAKKGPVSSGGNFESALGAQPPLGFYDPAGLLKNADQERFDRLRYVEIKHGRISMLAVAGHLIQQNFRLPGMLSTSADLSFADMPNGLAALSKIPPLGLFQIIAFIGFLEIGVMKQKEGSFPGDMTLGGEPYA--WTKFSDEVKEQKRAIELNNGRAAQMGILGLMMHEAVNNHPYIINDLLGAPYTFN 229
            SAFNG  V+  AK SSS++ M           +FES +GAQPPLGF+DP GLL +ADQERF+RLRYVE+KHGRI+MLA+AGHL QQN RLPGMLS SADLSFADMPNG+AALSKIPP GL QI AF+GFLE+ VMK  EGSFPGD T GG P+A  W   S+E +  KRAIELNNGRAAQMGIL LM+HE +NN PY+INDLLGA YTFN
Sbjct:   24 SAFNGAAVATSAK-SSSAMKM-----------SFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNVRLPGMLSNSADLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYTFN 221          
BLAST of mRNA_P-littoralis_Contig186.44.1 vs. uniprot
Match: FCPB_MACPY (Fucoxanthin-chlorophyll a-c binding protein B, chloroplastic n=6 Tax=Phaeophyceae TaxID=2870 RepID=FCPB_MACPY)

HSP 1 Score: 283 bits (725), Expect = 3.620e-94
Identity = 149/229 (65.07%), Postives = 175/229 (76.42%), Query Frame = 0
Query:    3 MELAVALASVASASAFVAPSAFNGGVVSQQAKASSSSLTMAAKKGPVSSGGNFESALGAQPPLGFYDPAGLLKNADQERFDRLRYVEIKHGRISMLAVAGHLIQQNFRLPGMLSTSADLSFADMPNGLAALSKIPPLGLFQIIAFIGFLEIGVMKQKEGSFPGDMTLGGEPY--AWTKFSDEVKEQKRAIELNNGRAAQMGILGLMMHEAVNNHPYIINDLLGAPYTFN 229
            M+ AV   + A+A  F  PSAFNG  ++  AKA S+ + M           +FES +GAQ PLGF+DP GLL +ADQERF+RLRYVE+KHGRI+MLA+AGHL QQN RLPGMLS SA+LSFADMPNG+AALSKIPP GL QI AFIGFLE+ VMK  EGSFPGD TLGG P+  +W   S+E +  KRAIELNNGRAAQMGIL LM+HE +NN PY+INDL+GA YTFN
Sbjct:    1 MKSAVMAVACAAAPGFRGPSAFNGAALTTSAKACSA-MKM-----------SFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGASWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLVGASYTFN 217          
BLAST of mRNA_P-littoralis_Contig186.44.1 vs. uniprot
Match: A0A6H5JDS8_9PHAE (LHCP protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDS8_9PHAE)

HSP 1 Score: 276 bits (707), Expect = 5.790e-92
Identity = 133/178 (74.72%), Postives = 152/178 (85.39%), Query Frame = 0
Query:   54 NFESALGAQPPLGFYDPAGLLKNADQERFDRLRYVEIKHGRISMLAVAGHLIQQNFRLPGMLSTSADLSFADMPNGLAALSKIPPLGLFQIIAFIGFLEIGVMKQKEGSFPGDMTLGGEPY--AWTKFSDEVKEQKRAIELNNGRAAQMGILGLMMHEAVNNHPYIINDLLGAPYTFN 229
            +FES +GAQPPLGF+DP GLL++ADQERF+RLRYVE+KHGRI+MLA+AGHL QQN RLPGMLS SA+LSFADMPNG+AALSKIPP GL QI AFIGFLE+ VMK  EGSFPGD TLGG P+  +W   S+E +  KRAIELNNGRAAQMGIL LM+HE +NN PY+INDLLGA Y FN
Sbjct:    4 SFESEIGAQPPLGFWDPLGLLEDADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGSSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYNFN 181          
BLAST of mRNA_P-littoralis_Contig186.44.1 vs. uniprot
Match: D8LNK6_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNK6_ECTSI)

HSP 1 Score: 283 bits (723), Expect = 1.340e-91
Identity = 145/209 (69.38%), Postives = 167/209 (79.90%), Query Frame = 0
Query:   23 AFNGGVVSQQAKASSSSLTMAAKKGPVSSGGNFESALGAQPPLGFYDPAGLLKNADQERFDRLRYVEIKHGRISMLAVAGHLIQQNFRLPGMLSTSADLSFADMPNGLAALSKIPPLGLFQIIAFIGFLEIGVMKQKEGSFPGDMTLGGEPY--AWTKFSDEVKEQKRAIELNNGRAAQMGILGLMMHEAVNNHPYIINDLLGAPYTFN 229
            AFNG  V+  AK SSS++ M           +FES +GAQPPLGF+DP GLL++ADQERF+RLRYVE+KHGRI+MLA+AGHL QQN RLPGMLS SA+LSFADMPNG+AALSKIPP GL QI AFIGFLE+ VMK  EGSFPGD TLGG P+  +W   S+E +  KRAIELNNGRAAQMGIL LM+HE +NN PY+INDLLGA YTFN
Sbjct:  181 AFNGAAVATPAK-SSSAMKM-----------SFESEIGAQPPLGFWDPLGLLEDADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGSSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYTFN 377          
BLAST of mRNA_P-littoralis_Contig186.44.1 vs. uniprot
Match: FCPF_MACPY (Fucoxanthin-chlorophyll a-c binding protein F, chloroplastic (Fragment) n=1 Tax=Macrocystis pyrifera TaxID=35122 RepID=FCPF_MACPY)

HSP 1 Score: 276 bits (707), Expect = 1.610e-91
Identity = 143/211 (67.77%), Postives = 164/211 (77.73%), Query Frame = 0
Query:   21 PSAFNGGVVSQQAKASSSSLTMAAKKGPVSSGGNFESALGAQPPLGFYDPAGLLKNADQERFDRLRYVEIKHGRISMLAVAGHLIQQNFRLPGMLSTSADLSFADMPNGLAALSKIPPLGLFQIIAFIGFLEIGVMKQKEGSFPGDMTLGGEPYA--WTKFSDEVKEQKRAIELNNGRAAQMGILGLMMHEAVNNHPYIINDLLGAPYTFN 229
            PSAFNG  +S  AK SSS++ M           +FES +GAQ PLGF+DP GLL +ADQERF+RLRYVE+KHGRI+MLA+AGHL QQN RLPGMLS SA+LSFADMPNG+AALSKIPP GL QI  FIGFLE+ VMK  EGSFPGD  +GG P+A  W   S E +  KRAIELNNGRAAQMGILG+M+HE ++N PYI NDLLGA YTFN
Sbjct:   13 PSAFNGAALSTPAK-SSSAMKM-----------SFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFIIGGNPFASSWDSMSSETQASKRAIELNNGRAAQMGILGMMVHEELSNQPYITNDLLGASYTFN 211          
BLAST of mRNA_P-littoralis_Contig186.44.1 vs. uniprot
Match: FCPD_MACPY (Fucoxanthin-chlorophyll a-c binding protein D, chloroplastic (Fragment) n=2 Tax=Phaeophyceae TaxID=2870 RepID=FCPD_MACPY)

HSP 1 Score: 271 bits (694), Expect = 5.690e-90
Identity = 132/178 (74.16%), Postives = 149/178 (83.71%), Query Frame = 0
Query:   54 NFESALGAQPPLGFYDPAGLLKNADQERFDRLRYVEIKHGRISMLAVAGHLIQQNFRLPGMLSTSADLSFADMPNGLAALSKIPPLGLFQIIAFIGFLEIGVMKQKEGSFPGDMTLGGEPYA--WTKFSDEVKEQKRAIELNNGRAAQMGILGLMMHEAVNNHPYIINDLLGAPYTFN 229
            +FE  +GAQ PLGF+DP GLL +ADQERF+RLRYVE+KHGRI+MLA+AGHL QQN RLPGMLS SA+LSFADMPNG+AALSKIPP GL QI  FIGFLE+ VMK  EGSFPGD TLGG P+A  W   S+E +E KRAIELNNGRAAQMGIL LM+HE +NN PY+INDLLGA Y FN
Sbjct:    5 SFELEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNARLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFTLGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGASYNFN 182          
BLAST of mRNA_P-littoralis_Contig186.44.1 vs. uniprot
Match: FCPC_MACPY (Fucoxanthin-chlorophyll a-c binding protein C, chloroplastic n=6 Tax=Phaeophyceae TaxID=2870 RepID=FCPC_MACPY)

HSP 1 Score: 270 bits (691), Expect = 5.170e-89
Identity = 141/211 (66.82%), Postives = 163/211 (77.25%), Query Frame = 0
Query:   21 PSAFNGGVVSQQAKASSSSLTMAAKKGPVSSGGNFESALGAQPPLGFYDPAGLLKNADQERFDRLRYVEIKHGRISMLAVAGHLIQQNFRLPGMLSTSADLSFADMPNGLAALSKIPPLGLFQIIAFIGFLEIGVMKQKEGSFPGDMTLGGEPYA--WTKFSDEVKEQKRAIELNNGRAAQMGILGLMMHEAVNNHPYIINDLLGAPYTFN 229
            PSAFNG  ++  AK SSS++ M           +FES +GAQ PLGF+DP GLL++ADQ+ F+RLRYVE+K GRI+MLA+AGHL QQN RLPGMLS SA+LSFADMPNG+AALSKIPP GL QI  FIGFLE+ VMK  EGSFPGD TLGG P+A  W   S E +  KRAIELNNGRAAQMGIL LM+HE +NN PY+INDLLGA Y FN
Sbjct:   18 PSAFNGAALTTSAK-SSSAMKM-----------SFESEIGAQAPLGFWDPLGLLEDADQDAFERLRYVEVKLGRIAMLAIAGHLTQQNARLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFTLGGNPFASSWDAMSAETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGASYNFN 216          
BLAST of mRNA_P-littoralis_Contig186.44.1 vs. uniprot
Match: A0A6H5KBS3_9PHAE (LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBS3_9PHAE)

HSP 1 Score: 264 bits (674), Expect = 1.410e-86
Identity = 133/203 (65.52%), Postives = 151/203 (74.38%), Query Frame = 0
Query:   54 NFESALGAQPPLGFYDPAGLLKNA-------------------------DQERFDRLRYVEIKHGRISMLAVAGHLIQQNFRLPGMLSTSADLSFADMPNGLAALSKIPPLGLFQIIAFIGFLEIGVMKQKEGSFPGDMTLGGEPYA--WTKFSDEVKEQKRAIELNNGRAAQMGILGLMMHEAVNNHPYIINDLLGAPYTFN 229
            +FES LGAQPPLGF+DP GLL +                          DQERFDRLRYVE+KHGRISMLAVAGHL+ QN+R PG LS  A L+FADMPNG+AA+SKIPPLGL QI+AFIGFLE+ VMK  EGSFPGDMT+GG P+A  W   S+E K  KRAIELNNGRAAQMGIL +M+HE ++N PYIINDLL APYTFN
Sbjct:    4 SFESELGAQPPLGFFDPLGLLIDQVVPQLPPSCQSSLLVICADGLEPWEDQERFDRLRYVEVKHGRISMLAVAGHLVAQNYRFPGYLSYDAKLTFADMPNGVAAISKIPPLGLAQIVAFIGFLELNVMKNVEGSFPGDMTIGGNPFAAQWDAMSEETKLSKRAIELNNGRAAQMGILAMMIHEEISNQPYIINDLLNAPYTFN 206          
BLAST of mRNA_P-littoralis_Contig186.44.1 vs. uniprot
Match: A0A7S2UU90_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU90_9STRA)

HSP 1 Score: 253 bits (646), Expect = 2.810e-82
Identity = 138/225 (61.33%), Postives = 164/225 (72.89%), Query Frame = 0
Query:    7 VALASVAS-ASAFVAPSAFNGGVVSQQAKASSSSLTMAAKKGPVSSGGNFESALGAQPPLGFYDPAGLLKNADQERFDRLRYVEIKHGRISMLAVAGHLIQQNFRLPGMLSTSADLSFADMPNGLAALSKIPPLGLFQIIAFIGFLEIGVMKQKEGSFPGDMTLGGEPYAWTK-FSDEVKEQKRAIELNNGRAAQMGILGLMMHEAVNNHPYIINDLLGAPYTFN 229
            +ALA+VA  ASAFV  +    GV       SSS+L M            FE+ +GAQ PLGF+DP GLL NADQERFDRLR+VE+KHGRISMLAV GHL+Q N RLPG +STSADL FAD+PNGLAA SKIPPLG+ Q++ F+G LE GV KQ++   PGD  L      WT+ F++E K QKRAIELNNGRAA MGIL LM+HE ++NHPY+INDL+GA YTFN
Sbjct:    6 LALAAVAGMASAFVPSAPLQTGVAK-----SSSALKM-----------TFETEVGAQNPLGFFDPLGLLDNADQERFDRLRFVELKHGRISMLAVVGHLVQNNVRLPGYISTSADLKFADIPNGLAAFSKIPPLGVVQLVTFVGLLEAGVWKQQDSGIPGDFGL-----RWTQNFTEEEKYQKRAIELNNGRAAMMGILALMVHEKLDNHPYVINDLVGASYTFN 209          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig186.44.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCX6_9PHAE7.610e-10170.22LHCP protein n=20 Tax=Phaeophyceae TaxID=2870 RepI... [more]
A0A6H5JHT6_9PHAE2.920e-9469.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
FCPB_MACPY3.620e-9465.07Fucoxanthin-chlorophyll a-c binding protein B, chl... [more]
A0A6H5JDS8_9PHAE5.790e-9274.72LHCP protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D8LNK6_ECTSI1.340e-9169.38Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
FCPF_MACPY1.610e-9167.77Fucoxanthin-chlorophyll a-c binding protein F, chl... [more]
FCPD_MACPY5.690e-9074.16Fucoxanthin-chlorophyll a-c binding protein D, chl... [more]
FCPC_MACPY5.170e-8966.82Fucoxanthin-chlorophyll a-c binding protein C, chl... [more]
A0A6H5KBS3_9PHAE1.410e-8665.52LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A7S2UU90_9STRA2.810e-8261.33Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.3460.10Chlorophyll a/b binding protein domaincoord: 54..227
e-value: 4.0E-33
score: 116.8
NoneNo IPR availablePANTHERPTHR21649:SF89CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTICcoord: 3..215
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 54..220
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 58..209
e-value: 2.8E-31
score: 109.2
IPR001344Chlorophyll A-B binding protein, plant and chromistaPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 3..215

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig186contigP-littoralis_Contig186:132353..136190 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig186.44.1mRNA_P-littoralis_Contig186.44.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig186 131027..136190 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig186.44.1 ID=prot_P-littoralis_Contig186.44.1|Name=mRNA_P-littoralis_Contig186.44.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=230bp
MKMELAVALASVASASAFVAPSAFNGGVVSQQAKASSSSLTMAAKKGPVS
SGGNFESALGAQPPLGFYDPAGLLKNADQERFDRLRYVEIKHGRISMLAV
AGHLIQQNFRLPGMLSTSADLSFADMPNGLAALSKIPPLGLFQIIAFIGF
LEIGVMKQKEGSFPGDMTLGGEPYAWTKFSDEVKEQKRAIELNNGRAAQM
GILGLMMHEAVNNHPYIINDLLGAPYTFN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022796Chloroa_b-bind
IPR001344Chloro_AB-bd_pln