prot_P-littoralis_Contig186.31.12 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig186.31.12
Unique Nameprot_P-littoralis_Contig186.31.12
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length776
Homology
BLAST of mRNA_P-littoralis_Contig186.31.12 vs. uniprot
Match: D7FKV7_ECTSI (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKV7_ECTSI)

HSP 1 Score: 1305 bits (3377), Expect = 0.000e+0
Identity = 671/775 (86.58%), Postives = 688/775 (88.77%), Query Frame = 0
Query:    1 MGDQYYVDEYDEELDMDELKDYMSPDEGDGDLAGFERPEMNVDFSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIAEDGLMHPFDQATGLTKGFAFVNFLNPQDAKQAAGTLNGWQLDKSHNIKVFPFEQLARLKSLPEEYETPEPKAFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWCEKLQAPTLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGEQFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQILRAFPMSTTTVADGAASLFRWSADGKYLARKGKNLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVIEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQATLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQASALRLEAHFYVSLSAQPNLFRPACHFLVQGILFCPLERNFTCLTKVDHRVRSNLCLSFKECGGLCALPLRVAQGERFNEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXXXXXXXKMKIEFRQQVAEMKLRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 775
            MGDQYYVDEYDEE DMDELKDYMSPDEGDGDLAGFERPE+NVD STAVVVSNLPQVVEAKHEKLGGVVRKVFS+MGTIA+DGL HPFD+ TGLTKGFAFVNFLNPQDAKQAA TLNGWQLDKSH IKV+PFEQLARL+SLPEEYE+PEPK FKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMW EKLQ P+LCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGE+FEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQ+LRAFPM+TTT ADGAASLFRWSADGKYLARKGK+LISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSV+EIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQ+TLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQ                                                                          GERF+EFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXXXXX  +MK+EFRQQVAEM LRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ
Sbjct:    1 MGDQYYVDEYDEEPDMDELKDYMSPDEGDGDLAGFERPELNVDLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSKMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAADGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQ--------------------------------------------------------------------------GERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXXXXXKIQMKLEFRQQVAEMNLRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 701          
BLAST of mRNA_P-littoralis_Contig186.31.12 vs. uniprot
Match: A0A835YNH6_9STRA (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNH6_9STRA)

HSP 1 Score: 812 bits (2098), Expect = 3.570e-286
Identity = 405/759 (53.36%), Postives = 509/759 (67.06%), Query Frame = 0
Query:   17 DELKDYMSPDEGDGD-LAGFERPEMNVDFSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIAEDGLMHPFDQATGLTKGFAFVNFLNPQDAKQAAGTLNGWQLDKSHNIKVFPFEQLARLKSLPEEYETPEPKAFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWCEKLQAPTLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGEQFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQILRAFPMSTTTVADGAASLFRWSADGKYLARKGKNLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDN--VLAYWAPEQANAPARVSVIEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLG-DVPKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQATLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQASALRLEAHFYVSLSAQPNLFRPACHFLVQGILFCPLERNFTCLTKVDHRVRSNLCLSFKECGGLCALPLRVAQGERFNEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXXXXXXXKMKIEFRQQVAEMKLRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVK 771
            D L D+MS ++ D D L  F+RP++ +DFSTAVVV N+P+V   K  KL GVV K+F++ GTI E+G+  P D A G + GF F+NF   ++A+ A   +N +QLDK H   VFP+E+L +L S+P+EY  P P  ++PR D  SWLADE HRDQFV+RYS P   G   HE  V WCE+   PT CYGGEREK  GKAW EL++ WSPQGTYL + H+PGIALWGGEQFEKQGRF H +VKV+EFSPCE Y++TCNF+  ++A+IVWEV +G +LR FP        G  SLF+WS DG+++ARKG++ +SIY LPSM LLDKKSLKA G++DFEWSP  +   LAYWAPEQ N PARVSV+EIPSRK+LRQKNL  VSECRLHWQ+EG YLCVKVLRHSK+KKTMYNNFE+FRV +P VPVE +E +  V AFAWEP GDRFA+V G ++P++ +TFYTMKGGA  NEL E+ TL+D+P NH+YWSP G   ++AAMG++ G  NG L FYDVE++  L+++EHFR +Y+EWDPSGRY CTAV+QP+ GSHWKAQMDNGY+L+SFQ                                                                          GE+F E  KDNFYQ+ WRPRP SLL+S EKKKVV+NL+KYE+                      + K  FR  VA  + RL  R  ELV+LR+GYDS DE+++ V++RT EV++SVK
Sbjct:   29 DPLADWMSEEDPDDDGLGDFQRPQLRMDFSTAVVVDNIPRVPAEKLVKLRGVVTKLFNQCGTIQENGICIPTD-AAGESLGFMFINFTTAEEARSAVAVINNYQLDKRHQFHVFPYERLDQLASVPDEYAPPPPMEYRPRPDLGSWLADENHRDQFVIRYSMPGVGGTPAHETIVNWCERFAPPTQCYGGEREKAQGKAWVELYVTWSPQGTYLASLHIPGIALWGGEQFEKQGRFAHSNVKVIEFSPCENYLLTCNFDTTERAMIVWEVRSGAVLRTFP--ARAFEGGPPSLFKWSPDGRFIARKGRDCVSIYALPSMALLDKKSLKATGIADFEWSPSTSSCALAYWAPEQDNTPARVSVVEIPSRKDLRQKNLFNVSECRLHWQNEGTYLCVKVLRHSKTKKTMYNNFELFRVADPQVPVEMLELRSNVIAFAWEPTGDRFAIVHGTELPRVNITFYTMKGGASGNELAEVVTLEDKPVNHLYWSPQGQFIVMAAMGENTGGTNGYLNFYDVESKTILRESEHFRLSYLEWDPSGRYICTAVNQPIDGSHWKAQMDNGYRLWSFQ--------------------------------------------------------------------------GEQFYELTKDNFYQVLWRPRPVSLLSSEEKKKVVRNLKKYERRFERADKIASRRKARAAMAGKVRQKQAFRAHVAARRERLLARHHELVELRDGYDSHDEANFFVETRTREVIMSVK 710          
BLAST of mRNA_P-littoralis_Contig186.31.12 vs. uniprot
Match: A0A6H5KAX0_9PHAE (eIF2A domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAX0_9PHAE)

HSP 1 Score: 590 bits (1522), Expect = 2.920e-204
Identity = 327/485 (67.42%), Postives = 339/485 (69.90%), Query Frame = 0
Query:  297 STTTVADGAASLFRWSADGKYLARKGKNLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVIEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQATLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQASALRLEAHFYVSLSAQPNLFRPACHFLVQGILFCPLERNFTCLTKVDHRVRSNLCLSFKECGGLCALPLRVAQGERFNEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXXXXXXXKMKIEFRQQ------VAEMKLRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 775
            S  +V DGAASLFRWSADGKYLARKGK+LISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSV+EIPSRKELRQKNLVMVSECRLHW                                            QVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQ LETLQDRPFNHIYWSP+GNIC+LAAMGDDVGPHNGRLEFYDVENQ+TLKQTEHFRCNYIEWDPSGRYACTAVSQPVTG HWKAQMDNGYQLFSFQ                                                                          GERF+EFKKD+FYQIQWRPRPASLLTSAEKKKVVKNLRKY+K       XXXXXX         +MK+EFRQQ      VA+MKLRLE RRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ
Sbjct:    8 SFLSVEDGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHW--------------------------------------------QVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQVLETLQDRPFNHIYWSPVGNICILAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGGHWKAQMDNGYQLFSFQ--------------------------------------------------------------------------GERFHEFKKDHFYQIQWRPRPASLLTSAEKKKVVKNLRKYDKRFEKDDRXXXXXXAREAMADKIQMKLEFRQQASGLSRVADMKLRLEARRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 374          
BLAST of mRNA_P-littoralis_Contig186.31.12 vs. uniprot
Match: A0A8K1FRG0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FRG0_PYTOL)

HSP 1 Score: 593 bits (1528), Expect = 2.710e-200
Identity = 326/739 (44.11%), Postives = 430/739 (58.19%), Query Frame = 0
Query:   43 DFSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIAEDGLMHPFDQATGLTKGFAFVNFLNPQDAKQAAGTLNGWQLDKSHNIKVFPFEQLARLKSLPEEYETPEPKAFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWCEKLQAPTLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGEQFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQILRAFPMSTTT-----VADGAASLFRWSADGKYLARKGKNLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVIEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDV-PKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQATLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQASALRLEAHFYVSLSAQPNLFRPACHFLVQGILFCPLERNFTCLTKVDHRVRSNLCLSFKECGGLCALPLRVAQGERFNEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXXXXXXXKMKIEFRQQVAEMKLRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 775
            D+S  VVV  LP V  AKH KL  VV+K+FS++GT+ +  +  PF  A G T GFAFV F     A  A  T+N + LDK H + V  +  L + +  PEE+  P+ + F    +  +WL D   RD FVLR+S          E E+ W +K +  TL Y G REK  GK WC  +++WSPQGTYL TFH  GIALWGG+ +EK GRF HK+VK+  FSP E Y++T +    + AII+W+V T ++LRAFP    T     V  G  + F+WSAD +++AR+GK++IS+YELPSM+LLDKKSLKA+GV DF WSP D +LAYWAPE  N PARVS++E+PSR+E+RQKNL  VS+C+L W   G +L VKV RHSKSKKT++ NFEIFRV E LVPVE+ E K  + AF++EP G RFA+V G+   +L V+FY M GGA KNEL  L TL D+P +H+YWSP GN  +LA +G+     NG LEF+D + + ++   EHF+C ++EWDPSGR   +AV QP+  S++K QMDNG+ L++FQ                                                                          G++  E KKD FYQ  WRPRP +LL+  E K VVKNL+KYEK                      +   EF   VA        RRQE + L NGYDS+D+  Y+V++R+ + VLS KE +Q
Sbjct:   46 DYSMCVVVGGLPVVDNAKHGKLLNVVKKIFSQVGTVVDIDM--PF-AANGNTNGFAFVEFEQDTHANDAVRTINNFALDKRHTLLVNKYTDLEKYQKTPEEFVAPKIEKFVEPKNLKTWLMDSARRDMFVLRHST---------ETEIFWSDKGEV-TLDYDGAREKTNGKQWCSQYVLWSPQGTYLATFHPQGIALWGGDNYEKVGRFAHKNVKIAVFSPQENYLVTLSETDTENAIIIWDVKTSKMLRAFPAGKPTGAKGEVVQGLMTPFKWSADDRFVARRGKDVISVYELPSMKLLDKKSLKADGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLQWHPNGTFLNVKVTRHSKSKKTLFTNFEIFRVHESLVPVESFEMKDTIVAFSFEPKGSRFAIVHGEGNQRLNVSFYDMNGGAKKNELTLLYTLTDKPCSHLYWSPHGNNIVLAGLGEI----NGVLEFWDTDEKQSITIQEHFKCTHVEWDPSGRVVSSAVCQPIDNSYYKFQMDNGFTLWTFQ--------------------------------------------------------------------------GKKLLEEKKDAFYQFLWRPRPRTLLSDKEYKDVVKNLKKYEKRFNEMDRMKERERIAAEKAEKQRQHQEFVDLVAARAETARARRQEYIALLNGYDSEDDDEYIVETRSYDDVLSEKEEVQ 693          
BLAST of mRNA_P-littoralis_Contig186.31.12 vs. uniprot
Match: M4BHP4_HYAAE (Eukaryotic translation initiation factor 3 subunit B n=15 Tax=Peronosporaceae TaxID=4777 RepID=M4BHP4_HYAAE)

HSP 1 Score: 593 bits (1528), Expect = 7.030e-200
Identity = 326/763 (42.73%), Postives = 441/763 (57.80%), Query Frame = 0
Query:   21 DYMSPDEGDGDLA--GFERPEMNVDFSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIAEDGLMHPFDQATGLTKGFAFVNFLNPQDAKQAAGTLNGWQLDKSHNIKVFPFEQLARLKSLPEEYETPEPKAFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWCEKLQAPTLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGEQFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQILRAFPMSTTT-----VADGAASLFRWSADGKYLARKGKNLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVIEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDVPK-LEVTFYTMKGGAG-KNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQATLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQASALRLEAHFYVSLSAQPNLFRPACHFLVQGILFCPLERNFTCLTKVDHRVRSNLCLSFKECGGLCALPLRVAQGERFNEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXXXXXXXKMKIEFRQQVAEMKLRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 774
            DY+S +E + ++     E  +   DFS AVVV  LP V ++KH KL  VV+K+F ++G++ +  +  PF    G T GFAFV +     A  A  T+N + LDK H + V  +E + R    P+E+  P+   F    +  SWL D   RD FVLR+           E E+ W +K +   L Y G+REK  GK WC  +++WSPQGTYL TFH  GIALWGG+++EK GRF HK VK+  FSP E Y++T +  + + AII+W+V T ++LRAFP    T     V  G  + F+WSAD KY+AR+G ++IS+YELPSM+LL+KKSL+AEGV DF WSP D +LAYWAPE  N PARVS++E+PSR E+RQKNL  VS+C+LHW  +G +LCVKV RHSKSKKTMY NFE+FRV+E LVPVE +E K  + AFAWEP G RFA V G+  + L V+FY M GG+    E+  L TL+D+  +H+YWSP+GN  +LA +G+     NG+LEF+D   Q ++   EHF+C+++EWDPSGR   TAV QP+  S++K  MDNGY L++FQ                                                                          G++  E KKD F+Q  WRPRP +LL+ A+ K VVKNL+K+EK                      K + EF++ + +  +   GRR E + L  GYDSDDE+ Y+V   T + VL VKE +
Sbjct:   22 DYLSDEEVEDEVMTKAHEEADFCNDFSMAVVVGGLPVVDDSKHGKLLNVVKKIFGQVGSVVDIDM--PFGD-DGNTTGFAFVEYEQEAHANDAVRTINSFALDKRHTMNVNKYEDVERYLKTPDEFVAPKVDKFVEPKNLKSWLTDPSRRDMFVLRHGT---------ETEIFWSDKGEVE-LDYAGDREKTNGKQWCMQYVLWSPQGTYLATFHPQGIALWGGDKYEKVGRFAHKKVKLAMFSPNENYLITVSETEQESAIIIWDVKTSKLLRAFPAGKPTGAKGEVVQGLMTPFKWSADDKYVARRGTDVISVYELPSMKLLEKKSLRAEGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRHEVRQKNLFNVSDCKLHWHPDGTFLCVKVTRHSKSKKTMYTNFELFRVQEQLVPVEMLEVKDNIVAFAWEPKGTRFAAVHGEGQQHLNVSFYDMDGGSNVAKEVTLLYTLKDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDTTEQQSITVQEHFKCSHVEWDPSGRVVATAVCQPLDNSYYKLTMDNGYNLWTFQ--------------------------------------------------------------------------GKKLLEEKKDTFFQFLWRPRPRTLLSDAQYKNVVKNLKKFEKRFDQMDRFKERERLAAENAERNKKEQEFQELLQKRLITAAGRRAEYLSLLGGYDSDDENEYIVQKHTYDDVLEVKEEV 693          
BLAST of mRNA_P-littoralis_Contig186.31.12 vs. uniprot
Match: G5A2B4_PHYSP (Eukaryotic translation initiation factor 3 subunit B n=7 Tax=Phytophthora TaxID=4783 RepID=G5A2B4_PHYSP)

HSP 1 Score: 586 bits (1510), Expect = 1.440e-197
Identity = 325/763 (42.60%), Postives = 436/763 (57.14%), Query Frame = 0
Query:   21 DYMSPDEGDGDLAGFERPEMNV--DFSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIAEDGLMHPFDQATGLTKGFAFVNFLNPQDAKQAAGTLNGWQLDKSHNIKVFPFEQLARLKSLPEEYETPEPKAFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWCEKLQAPTLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGEQFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQILRAFPMSTTT-----VADGAASLFRWSADGKYLARKGKNLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVIEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGD-VPKLEVTFYTMKGGAGK-NELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQATLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQASALRLEAHFYVSLSAQPNLFRPACHFLVQGILFCPLERNFTCLTKVDHRVRSNLCLSFKECGGLCALPLRVAQGERFNEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXXXXXXXKMKIEFRQQVAEMKLRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 774
            DY+S +E + ++      E +   D+S +VVV  LP V E KH KL  VV+K+F ++G + +  +  PF    G T GFAFV +     A  A  T+N + LDK H + V  +E + R +  P E+  P+   F    +  +WLAD   RD FVLR+           E E+ W +K +   L Y G+REK   K WC  +++WSPQGTYL TFH  GIALWGG+++EK GRF HK+VK+  FSP E Y++T +  + D AII+W+V T ++LRAFP    T     V  G  + F+WSAD KY+AR+GK++ISIYELPSM+LL+KKSL+AEGV DF WSP D +LAYWAPE  N PARVS++E+PSR+E+RQKNL  VS+C+LHW   G +LCVKV RHSKSKKTMY NFE+FRV E LVPVE +E K+ + AFAWEP G RFA   G+   +L V+FY M GG+    E+  L TL+D+  +H+YWSP+GN  +LA +G+     NG+LEF+D   Q ++   EHF+C ++EWDPSGR   TAV QP+  S++K  MDNGY L++FQ                                                                          G++  E KKD FYQ  WRPRP +LL+  E   VVKNL+K+EK                      + + EF++ + +       RR E V L +GYDS+DES Y+V S T + VL  KE +
Sbjct:   22 DYLSDEEVEDEVTSKAHEEADFCNDYSMSVVVGGLPFVDETKHGKLLNVVKKIFGQVGPVVD--IRMPFGGG-GKTTGFAFVEYEQEAHANDAVRTINNFALDKRHTMLVNKYEDIERFQKTPAEFAAPKVDKFVEPKNLKTWLADPARRDMFVLRHGS---------ETELFWSDKGEIE-LDYAGDREKLNDKQWCSQYVLWSPQGTYLATFHPQGIALWGGDKYEKVGRFAHKNVKLAVFSPNENYILTLSETEQDSAIIIWDVKTSKMLRAFPAGKPTGAKGEVVQGLMTPFKWSADDKYVARRGKDVISIYELPSMKLLEKKSLRAEGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCVKVTRHSKSKKTMYTNFELFRVHEQLVPVEMLEVKESIVAFAWEPKGTRFATAHGEGQQRLNVSFYDMDGGSKSVKEVTLLYTLKDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDATEQQSITVQEHFKCTHVEWDPSGRVVATAVCQPLDNSYYKFTMDNGYTLWTFQ--------------------------------------------------------------------------GKQLLEEKKDAFYQFLWRPRPRTLLSDEEYNNVVKNLKKFEKRFDQMDRLKERERLAAEKAERNRQEQEFQELLEKRLASAAARRAEYVALLDGYDSEDESEYIVQSHTYDDVLETKEEV 693          
BLAST of mRNA_P-littoralis_Contig186.31.12 vs. uniprot
Match: A0A0P1APB3_PLAHL (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1APB3_PLAHL)

HSP 1 Score: 586 bits (1510), Expect = 1.440e-197
Identity = 327/773 (42.30%), Postives = 446/773 (57.70%), Query Frame = 0
Query:   10 YDEELDMDELKDYMSPDEGDGDLAGFERPEMNVDFSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIAEDGLMHPFDQATGLTKGFAFVNFLNPQDAKQAAGTLNGWQLDKSHNIKVFPFEQLARLKSLPEEYETPEPKAFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWCEKLQAPTLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGEQFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQILRAFPMSTTT-----VADGAASLFRWSADGKYLARKGKNLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVIEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGD-VPKLEVTFYTMKGGA-GKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQATLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQASALRLEAHFYVSLSAQPNLFRPACHFLVQGILFCPLERNFTCLTKVDHRVRSNLCLSFKECGGLCALPLRVAQGERFNEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXXXXXXXKMKIEFRQQVAEMKLRLEG-RRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 774
            Y E L  +EL+D M+           E  +   D+S A+VV  LP V E+KH KL  VV+K+F ++G + +  +  PFD ++G T GFAF+ +     A  A  T+N + LDK H + V  +E + R    PEE+  P   +F    +  +WL D   RD FVLR+           E E+ W +K +   L Y G+REK+ GK WC  +++WSPQG+YL TFH  GIALWGGE++EK GRF HK+VK+  FSP E Y++T +  + + AII+W+V T ++LRAFP   +T     V  G  + F+WSAD K++AR+GK++IS+YELPSM+LLDKKSL+AEGV DF WSP D +LAYWAPE  N PARVS++E+PSR+E+RQKNL  VS+C+LHW   G +LCVKV RHSKSKKTM+ NFE+FRV E LVPVE +E K  + AFAWEP G RFA V G+   +L V+FY M GG+    E+  L TL D+  +H+YWSP+GN  +LA +G+     NG+LEF+DV  Q ++   EHF+C ++EWDPSGR   TAV QP+  S++K  MDNGY L++FQ                                                                          G++  E KK+ FYQ  WRPRP +LL+ +E   VVKNL+ +EK                      + + EF Q++ + +L +   RR E + L +GYDS DES Y+V S T + VL +KE +
Sbjct:   20 YAEYLSDEELEDEMT-------TKAHEEADFANDYSMAIVVGGLPVVDESKHGKLLNVVKKIFGQVGNVVD--IQVPFD-SSGKTTGFAFIEYEQEAHANDAVRTINNFALDKRHTMIVNKYEDMERYVKTPEEFIPPTINSFVEPKNLKTWLMDPARRDMFVLRHGS---------ETEIFWSDKGELE-LDYAGDREKKNGKQWCSQYVLWSPQGSYLATFHPQGIALWGGEKYEKVGRFAHKNVKLAVFSPHEKYLITLSETEQEAAIIIWDVQTSKMLRAFPAGKSTGVKGEVVQGLMTPFKWSADDKFVARRGKDVISVYELPSMKLLDKKSLRAEGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCVKVTRHSKSKKTMFTNFELFRVHEQLVPVEMLEMKDNIVAFAWEPKGTRFATVHGEGQQRLNVSFYDMDGGSKSSKEVTLLYTLTDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDVSEQQSITIQEHFKCTHVEWDPSGRVVATAVCQPLDNSYYKFTMDNGYTLWTFQ--------------------------------------------------------------------------GKQLLEEKKETFYQFLWRPRPRTLLSESEYNHVVKNLKTFEKRFDQMDRLKERERLAALNAERKREEQEF-QELLDRRLAIAAARRAEYIALLDGYDSQDESEYIVQSHTYDDVLEIKEEV 693          
BLAST of mRNA_P-littoralis_Contig186.31.12 vs. uniprot
Match: A0A3M6VP81_9STRA (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VP81_9STRA)

HSP 1 Score: 581 bits (1498), Expect = 9.220e-196
Identity = 324/763 (42.46%), Postives = 438/763 (57.40%), Query Frame = 0
Query:   21 DYMSPDEGDGDLA--GFERPEMNVDFSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIAEDGLMHPFDQATGLTKGFAFVNFLNPQDAKQAAGTLNGWQLDKSHNIKVFPFEQLARLKSLPEEYETPEPKAFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWCEKLQAPTLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGEQFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQILRAFPMSTTT-----VADGAASLFRWSADGKYLARKGKNLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVIEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGD-VPKLEVTFYTMKG-GAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQATLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQASALRLEAHFYVSLSAQPNLFRPACHFLVQGILFCPLERNFTCLTKVDHRVRSNLCLSFKECGGLCALPLRVAQGERFNEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXXXXXXXKMKIEFRQQVAEMKLRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 774
            DY+S +E + ++     E  +   DFS AVVV  LP V E+KH KL  VV+K+F ++G + +  +  PFD  +G T GFAFV +     AK A  T+N + LDK H + V  +E + R +    E+  P+ + F    +  +WL D   RD FVLR+           E E+ W +K +   + Y G+REK  GK WC  +++WSPQGTYL TFH  GIALWGG+++EK GRF HK+V    FSP E Y++T +  + D AII+W+V T ++LRAFP    T     V  G  + F+WSA  KY+AR+G ++ISIYELPSM+LL+KKSL+AEGV DF WSP D +LAYWAPE  N PARVS++E+PSR+E+RQKNL  VS+C+LHW   G +LCVKV RHSKSKKTM+ NFE+FR++E LVPVE +E K  + AFAWEP G RFA V G+   +L V+FY M G      E+  L TL+D+  +H+YWSP+GN  +LA +G+     NG+LEF+D   Q ++   EHF+C ++EWDPSGR   TAV QP+  S++K  MDNGY L++FQ                                                                          G++  E KK++FYQ  WRPRP +LL+ AE KKVVKNL+KYEK                      +   EF++ +  +      RR E + L +GYDS+DE+ Y+V S T + VL  KE I
Sbjct:   22 DYLSDEEAEDEVTIKANEEEDFCNDFSMAVVVGGLPVVDESKHGKLLNVVKKIFGQVGAVVD--IHMPFD-GSGKTTGFAFVEYEQEAHAKDAVRTINNFALDKRHTMIVNKYEDIERYEKTTTEFVAPKVEKFVEPKNLQTWLMDPARRDMFVLRHGS---------ETEIFWSDKGEIEFV-YAGDREKTNGKQWCSQYVLWSPQGTYLATFHPQGIALWGGDKYEKVGRFAHKNVTRAVFSPHENYLITVSETEQDSAIIIWDVKTSKMLRAFPAGKPTGAKNEVVQGLMTPFKWSAGDKYVARRGNDVISIYELPSMKLLEKKSLRAEGVHDFFWSPTDLILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCVKVTRHSKSKKTMFTNFELFRLQEQLVPVEMLEIKDNIVAFAWEPKGTRFATVHGEGQQRLSVSFYDMDGENKSTKEVTLLYTLKDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDATEQQSITVQEHFKCTHVEWDPSGRVVATAVCQPLDNSYYKFTMDNGYTLWTFQ--------------------------------------------------------------------------GKQLLEEKKESFYQFLWRPRPRTLLSDAEYKKVVKNLKKYEKRFDQMDRLKERERQAAKNAERNRKVQEFQELLQRLLAAAAVRRGEYIALLDGYDSEDENEYIVQSHTYDDVLESKEEI 693          
BLAST of mRNA_P-littoralis_Contig186.31.12 vs. uniprot
Match: A0A6G0L700_9STRA (Eukaryotic translation initiation factor 3 subunit B n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0L700_9STRA)

HSP 1 Score: 578 bits (1491), Expect = 1.040e-194
Identity = 321/763 (42.07%), Postives = 435/763 (57.01%), Query Frame = 0
Query:   21 DYMSPDEGDGDLAGFERPEMNV--DFSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIAEDGLMHPFDQATGLTKGFAFVNFLNPQDAKQAAGTLNGWQLDKSHNIKVFPFEQLARLKSLPEEYETPEPKAFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWCEKLQAPTLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGEQFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQILRAFPMSTTT-----VADGAASLFRWSADGKYLARKGKNLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVIEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGD-VPKLEVTFYTMKGGAGK-NELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQATLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQASALRLEAHFYVSLSAQPNLFRPACHFLVQGILFCPLERNFTCLTKVDHRVRSNLCLSFKECGGLCALPLRVAQGERFNEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXXXXXXXKMKIEFRQQVAEMKLRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 774
            DY+S +E + ++      E +   D+S AVVV  LP V E KH KL  VV+K+F ++GT+ +  +  PF  A G T GFAFV +     A  A  T+N + LDK H + V  +E + R +  P ++  P+   F    +  +WL D   RD FVLR+           E E+ W +K +   L Y G+REK  GK WC  +++WS QGTYL TFH  GIALWGG+++EK GRF HK+VK+  FSP E Y++T +    + AII+W+V T ++LRAFP    +     V  G  + F+WSAD KY+AR+GK++IS+YELPSM+LL+KKSL+AE V DF WSP D +LAYWA E  N PARVS++E+PSR+E+RQKNL  VS+C+LHW   G +LCVKV RHSKSKKTMY NFE+FRV E LVPV+ +E K+ + AFAWEP G RFA V G+   +L V+FY M GG+    E+  L TL+D+  +H+YWSP+GN  +LA +G+     NG+LEF+D   Q ++   EHF+C ++EWDPSGR   TAV QP+  S++K  MDNGY L++FQ                                                                          G++  E KKD FYQ  WRPRP +LL+  E   VVKNL+K+EK                      + + EF++ + +       RR E V L +GYDS+DES Y+V S T + VL  KE +
Sbjct:   22 DYLSDEEVEDEVTSKAHEEADFCNDYSMAVVVGGLPAVDETKHAKLLNVVKKIFGQVGTVVD--IHMPFG-AGGKTTGFAFVEYAQEAHANDAVRTINNFALDKRHTMLVNKYEDIERFQKTPAQFTAPKVDKFVEPKNLQTWLVDPARRDMFVLRHGS---------ETELFWSDKGELE-LDYAGDREKTNGKQWCSQYVLWSTQGTYLATFHPQGIALWGGDKYEKVGRFAHKNVKLAVFSPNEKYLITVSETDVESAIIIWDVKTSKMLRAFPAGKPSAVKGEVVQGLMTPFKWSADDKYVARRGKDVISVYELPSMKLLEKKSLRAENVHDFFWSPTDPILAYWASEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCVKVTRHSKSKKTMYTNFELFRVHEQLVPVDMLEVKENIVAFAWEPKGTRFATVHGEGQQRLNVSFYDMDGGSKSVKEVTLLYTLKDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDASEQQSITVQEHFKCTHVEWDPSGRVVATAVCQPLDNSYYKLTMDNGYTLWTFQ--------------------------------------------------------------------------GKQLLEEKKDAFYQFLWRPRPRTLLSDEEYNNVVKNLKKFEKRFDQMDRLKERERLAAEKAERNRKEQEFQELLEKRLATATARRAEYVALLDGYDSEDESEYIVQSHTYDDVLEEKEEV 693          
BLAST of mRNA_P-littoralis_Contig186.31.12 vs. uniprot
Match: F0W6T6_9STRA (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W6T6_9STRA)

HSP 1 Score: 573 bits (1477), Expect = 1.290e-192
Identity = 321/777 (41.31%), Postives = 439/777 (56.50%), Query Frame = 0
Query:   13 ELDMDELKDYMSPDEG--DGDLAGFERPEMNVDFSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIAEDGLMHPFDQATGLTKGFAFVNFLNPQDAKQAAGTLNGWQLDKSHNIKVFPFEQLARLKSLPEEYETPEPKAFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWCEKLQAPTLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGEQFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQILRAFPMS-----TTTVADGAASLFRWSADGKYLARKGKNLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVIEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDVP-KLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQATLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQASALRLEAHFYVSLSAQPNLFRPACHFLVQGILFCPLERNFTCLTKVDHRVRSNLCLSFKECGGLCALPLRVAQGERFNEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXXXXXXXKMKIEFRQQVAEMKLRLEGRRQELVDLR-------NGYDSDDESHYVVDSRTGEVVLSVKEVI 774
            E +  E  DY+S ++   D D       E   DFST V+V  LP V  +KH KL  V+RK+FS++G I +  L  P   + G T GFAF+ + +   A  A  TL+ + LDK+H + V  +  L +  SLPE+Y  P  + FK   D  +WL D + RD F LR+           E+E+ W +K +  TL Y G REK  GK WC  +L+WSPQGTYL TFH  GIALW GE ++K  RF HK VK   FSP E Y+ T +    ++AIIVW+V + +ILRAFP       T  V  G  + F+WS D +++ R+GK++IS++ELPSM+LL+KKSLKA+G+ DF WSP D +LAYWAPE+ N PARVS++E+PSR ELRQ+NL  VS+C+LHW   G +LCVKV RHSKSKKT+Y NFE+FR+RE L+PVE +E K  V AFAWEP G RF ++ G+ P +  ++FY MKGG   NE+  L TL  +  +H YWSP GN  +LA +G+     NG+LEF+D + Q ++   EHF+C ++EWDPSGR   TAV QP+  S++K QMDNG+ L+SFQ                                                                          G+   E KK+ FYQ  WRPRP SLLT  E  +VV+NL+KY++                      K +I  R+ + E +  +E R Q +++ R       +GYDS++E+ Y++ + T + V+S KE I
Sbjct:   14 EKEAQEYADYLSEEDSNDDADAVKLNEQEFCNDFSTCVIVGGLPVVDTSKHAKLCNVIRKIFSQIGPIID--LQMPIT-SNGKTNGFAFLAYEDADLAANAIRTLHQFALDKTHTLHVNAYRDLKKYASLPEKYVDPPIEEFKEPKDLKAWLRDPERRDMFALRHGT---------ESEIYWIDKGEI-TLEYDGAREKTNGKQWCSQYLLWSPQGTYLATFHPQGIALWAGEGYQKVARFAHKHVKRCIFSPNEKYLTTVSETDTERAIIVWDVASSRILRAFPAGISKAETNEVVQGLKTPFKWSCDDRFITRRGKDVISVHELPSMQLLEKKSLKADGIHDFVWSPTDPILAYWAPEKDNVPARVSLVELPSRNELRQQNLFNVSDCKLHWHPNGTFLCVKVTRHSKSKKTLYTNFELFRIREALIPVEMLEMKDPVIAFAWEPKGSRFVIIHGESPTRASISFYDMKGGGRNNEITLLYTLTAKQCSHAYWSPHGNHIVLAGLGE----LNGKLEFWDTDEQQSITLQEHFKCTHVEWDPSGRIVMTAVCQPIESSYYKHQMDNGFMLWSFQ--------------------------------------------------------------------------GKLLLEEKKNAFYQFLWRPRPRSLLTEEEYAEVVRNLKKYQRNYNELDRMKERERSE-------KKQIRKREMLQEHQKLVEKRTQAIMEQRAGYIAGLDGYDSENENEYIIQTTTHDKVVSQKEEI 692          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig186.31.12 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKV7_ECTSI0.000e+086.58Eukaryotic translation initiation factor 3 subunit... [more]
A0A835YNH6_9STRA3.570e-28653.36Eukaryotic translation initiation factor 3 subunit... [more]
A0A6H5KAX0_9PHAE2.920e-20467.42eIF2A domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A8K1FRG0_PYTOL2.710e-20044.11Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
M4BHP4_HYAAE7.030e-20042.73Eukaryotic translation initiation factor 3 subunit... [more]
G5A2B4_PHYSP1.440e-19742.60Eukaryotic translation initiation factor 3 subunit... [more]
A0A0P1APB3_PLAHL1.440e-19742.30Eukaryotic translation initiation factor 3 subunit... [more]
A0A3M6VP81_9STRA9.220e-19642.46Eukaryotic translation initiation factor 3 subunit... [more]
A0A6G0L700_9STRA1.040e-19442.07Eukaryotic translation initiation factor 3 subunit... [more]
F0W6T6_9STRA1.290e-19241.31Eukaryotic translation initiation factor 3 subunit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 47..129
e-value: 3.7E-4
score: 29.8
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 68..123
e-value: 1.1E-5
score: 25.2
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 46..133
score: 13.17433
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 45..129
e-value: 6.0E-17
score: 63.3
IPR013979Translation initiation factor, beta propellor-like domainPFAMPF08662eIF2Acoord: 387..584
e-value: 2.6E-40
score: 138.4
IPR011400Eukaryotic translation initiation factor 3 subunit BPIRSFPIRSF036424Transl_init_eIF3bcoord: 4..599
e-value: 1.7E-175
score: 582.9
coord: 648..775
e-value: 1.5E-20
score: 70.8
IPR011400Eukaryotic translation initiation factor 3 subunit BPANTHERPTHR14068EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATEDcoord: 654..774
coord: 31..585
IPR011400Eukaryotic translation initiation factor 3 subunit BHAMAPMF_03001eIF3bcoord: 41..730
score: 74.096252
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 218..514
e-value: 8.7E-11
score: 43.3
NoneNo IPR availablePANTHERPTHR14068:SF0EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Bcoord: 31..585
NoneNo IPR availablePANTHERPTHR14068:SF0EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Bcoord: 654..774
NoneNo IPR availableSUPERFAMILY82171DPP6 N-terminal domain-likecoord: 220..558
IPR034363eIF3B, RNA recognition motifCDDcd12278RRM_eIF3Bcoord: 45..128
e-value: 2.89979E-28
score: 106.506
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 38..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig186contigP-littoralis_Contig186:98240..113582 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig186.31.12mRNA_P-littoralis_Contig186.31.12Pylaiella littoralis U1_48mRNAP-littoralis_Contig186 97250..113685 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig186.31.12 ID=prot_P-littoralis_Contig186.31.12|Name=mRNA_P-littoralis_Contig186.31.12|organism=Pylaiella littoralis U1_48|type=polypeptide|length=776bp
MGDQYYVDEYDEELDMDELKDYMSPDEGDGDLAGFERPEMNVDFSTAVVV
SNLPQVVEAKHEKLGGVVRKVFSRMGTIAEDGLMHPFDQATGLTKGFAFV
NFLNPQDAKQAAGTLNGWQLDKSHNIKVFPFEQLARLKSLPEEYETPEPK
AFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWCEKLQAPT
LCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGEQFEKQGR
FPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQILRAFPMSTTT
VADGAASLFRWSADGKYLARKGKNLISIYELPSMRLLDKKSLKAEGVSDF
EWSPKDNVLAYWAPEQANAPARVSVIEIPSRKELRQKNLVMVSECRLHWQ
DEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAW
EPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWS
PMGNICLLAAMGDDVGPHNGRLEFYDVENQATLKQTEHFRCNYIEWDPSG
RYACTAVSQPVTGSHWKAQMDNGYQLFSFQASALRLEAHFYVSLSAQPNL
FRPACHFLVQGILFCPLERNFTCLTKVDHRVRSNLCLSFKECGGLCALPL
RVAQGERFNEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKRFEK
DDREKDRRKAREAMSDKIKMKIEFRQQVAEMKLRLEGRRQELVDLRNGYD
SDDESHYVVDSRTGEVVLSVKEVIQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR013979TIF_beta_prop-like
IPR011400EIF3B
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR034363eIF3B_RRM
IPR035979RBD_domain_sf