mRNA_P-littoralis_Contig186.21.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig186.21.1
Unique NamemRNA_P-littoralis_Contig186.21.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig186.21.1 vs. uniprot
Match: D7FIA9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIA9_ECTSI)

HSP 1 Score: 318 bits (814), Expect = 8.020e-98
Identity = 158/272 (58.09%), Postives = 201/272 (73.90%), Query Frame = 3
Query:  579 FKVVVDRILRIWRGTDAGKEGAPCIIAGDEETYSHLRNLMGIEPDKYRQIRRYPGHWHILLHIVKALNGRYWGAGVEFVAQALGTDDKKSGDASNYRRAHQTLSVTYEALWTMCLEMYLEEI-TSGDIRAEDQRNADGVVEWIKARNVHR-TFDLWAQFLLHDYPAYMTFRVALRTGNFLLRLDALRRIAEIFFITEKDRFQMLLLDHFTEMARMSPSDTKVMAELFFVALGKDAQARIGLDERQEVANRLNKTCTKRILSSSLGKMAPLAR 1388
             K  + R+  IW G+ AGK GAP I+ GDEETY H+ ++M  +P +YRQ+RRYPG WH+LLH+ KA+  RYWGAGVEFVA+ LGTD  KSG+ SNYRRAH  ++  + A   +C E YL+ + T  D   E+ +  DGVV WI AR   R TF +W QFLLHDYPAY+ FR ALRTGNF LRL+ LRRIA IFFIT KD++Q L++DH TE++R   +D +V++ELF V+LG D  ARIGLDERQEV+NRL KT TKRILSS++ K+AP+A+
Sbjct:  131 MKGAIQRVQGIWCGSPAGKAGAPFILGGDEETYKHMYHVMAQDPREYRQVRRYPGDWHLLLHMAKAMLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHITAFWAAFMALCREEYLKSLPTPSDRPVEEDKVVDGVVRWIVARAESRKTFAVWKQFLLHDYPAYIAFRTALRTGNFGLRLEGLRRIAPIFFITGKDKYQFLVVDHLTEVSRYLRNDMRVVSELFSVSLGPDTFARIGLDERQEVSNRLYKTLTKRILSSTIEKLAPIAQ 402          
BLAST of mRNA_P-littoralis_Contig186.21.1 vs. uniprot
Match: A0A6H5K3J0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3J0_9PHAE)

HSP 1 Score: 312 bits (799), Expect = 5.630e-97
Identity = 167/266 (62.78%), Postives = 198/266 (74.44%), Query Frame = 3
Query:  591 VDRILRIWRGTDAGKEGAPCIIAGDEETYSHLRNLMGIEPDKYRQIRRYPGHWHILLHIVKALNGRYWGAGVEFVAQALGTDDKKSGDASNYRRAHQTLSVTYEALWTMCLEMYLEEITSGDIRAEDQRNADGVVEWIKARNV-HRTFDLWAQFLLHDYPAYMTFRVALRTGNFLLRLDALRRIAEIFFITEKDRFQMLLLDHFTEMARMSPSDTKVMAELFFVALGKDAQARIGLDERQEVANRLNKTCTKRILSSSLGKMAPLA 1385
            VDRILRIWRGT AGK GAPCIIAGDEETY  L ++   E   YRQ+RRYPG WH+LLH+ KAL  RYWGAGVEFVA+ LGTD+ KS + SNYRRAH  L V +EA  ++C +M L      D+ AED  +   VV WIK R   H+TF LW QFLLHD+PAYM FR ALRTG+F+LRLDALRRIA IF+IT KDR+Q L++D   EM+RMS SD KV+ +LF V+L KDA AR+GLDERQ + NR+ KT TKRIL S + K+AP A
Sbjct:  182 VDRILRIWRGTVAGKNGAPCIIAGDEETYRVLYHIQKQERMAYRQLRRYPGDWHLLLHMAKALLKRYWGAGVEFVAKDLGTDNSKSSEGSNYRRAHHHLVVMWEARMSLCPKMCLPP--GEDMTAEDADSM--VVAWIKKRAAEHKTFALWQQFLLHDFPAYMAFRTALRTGDFMLRLDALRRIAPIFYITGKDRYQFLVVD-LAEMSRMSESDLKVIVKLFSVSLSKDACARLGLDERQGLTNRMYKTLTKRILPSFIHKLAPTA 442          
BLAST of mRNA_P-littoralis_Contig186.21.1 vs. uniprot
Match: A0A6H5L6D9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D9_9PHAE)

HSP 1 Score: 328 bits (841), Expect = 2.270e-96
Identity = 162/272 (59.56%), Postives = 203/272 (74.63%), Query Frame = 3
Query:  579 FKVVVDRILRIWRGTDAGKEGAPCIIAGDEETYSHLRNLMGIEPDKYRQIRRYPGHWHILLHIVKALNGRYWGAGVEFVAQALGTDDKKSGDASNYRRAHQTLSVTYEALWTMCLEMYLEEI-TSGDIRAEDQRNADGVVEWIKARNV-HRTFDLWAQFLLHDYPAYMTFRVALRTGNFLLRLDALRRIAEIFFITEKDRFQMLLLDHFTEMARMSPSDTKVMAELFFVALGKDAQARIGLDERQEVANRLNKTCTKRILSSSLGKMAPLAR 1388
             K  + RI  IW G+ AGK GAP I+ GDEETY H+ ++M  EP +YRQ+RRYPG WH+LLH+ KA+  RYWGAGVEFVA+ LGTD  KSG+ SNYRRAH  ++  + A   +C E YL+ + T GD   E+    DGVV WI AR   H+TF +W QFLLHDYPAY+ FR ALRTGNF LRL+ LRRIA IFFIT KD++Q L++DH TE++R S +D +V++ELF V+LG D  ARIGLDERQEV+NRL KT TKRILSS++ K+AP+A+
Sbjct:  890 MKAAIQRIQGIWCGSPAGKAGAPFILGGDEETYKHMYHVMAQEPREYRQVRRYPGDWHLLLHMAKAMLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHITAFWAAFMALCREEYLKSLSTPGDRPVEEDEVVDGVVRWIVARTESHKTFAVWKQFLLHDYPAYIAFRTALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLVVDHLTEVSRYSRNDMRVVSELFSVSLGPDTFARIGLDERQEVSNRLYKTLTKRILSSTIEKLAPIAQ 1161          
BLAST of mRNA_P-littoralis_Contig186.21.1 vs. uniprot
Match: A0A6H5JDT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDT2_9PHAE)

HSP 1 Score: 310 bits (794), Expect = 1.420e-95
Identity = 166/269 (61.71%), Postives = 193/269 (71.75%), Query Frame = 3
Query:  582 KVVVDRILRIWRGTDAGKEGAPCIIAGDEETYSHLRNLMGIEPDKYRQIRRYPGHWHILLHIVKALNGRYWGAGVEFVAQALGTDDKKSGDASNYRRAHQTLSVTYEALWTMCLEMYLEEITSGDIRAEDQRNADGVVEWIKARNV-HRTFDLWAQFLLHDYPAYMTFRVALRTGNFLLRLDALRRIAEIFFITEKDRFQMLLLDHFTEMARMSPSDTKVMAELFFVALGKDAQARIGLDERQEVANRLNKTCTKRILSSSLGKMAPLA 1385
            K  +D ILRIWRGT AGK+GAPCIIAGDEETY  L ++   E   YRQ RRYPG WH+ LH+ KAL  RYWGAGVEFVA+ LGTD+ KS + SNYRRAH  L V                 T GD+ AED  +   VV WIK R   H+TF LW QFLLHD+PAY+TFR ALRTG+F+LRLDALRRIA IF+IT KDR+Q L++DH  EM+ MS SD KV+AELF V+L KDA AR+GLDERQEVANR+ KT TK IL S + K+AP A
Sbjct:  193 KAAIDCILRIWRGTVAGKDGAPCIIAGDEETYRVLYHIQKQERVAYRQFRRYPGDWHLHLHVAKALLKRYWGAGVEFVAKDLGTDNSKSSEGSNYRRAHHHLVVMAS--------------TRGDMTAEDADSM--VVAWIKKRAAKHKTFALWEQFLLHDFPAYVTFRTALRTGDFMLRLDALRRIAPIFYITGKDRYQFLVVDHLAEMSTMSESDLKVIAELFSVSLSKDACARLGLDERQEVANRMYKTLTKWILPSFIHKLAPTA 445          
BLAST of mRNA_P-littoralis_Contig186.21.1 vs. uniprot
Match: A0A6H5JYE1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYE1_9PHAE)

HSP 1 Score: 301 bits (770), Expect = 9.440e-91
Identity = 150/272 (55.15%), Postives = 192/272 (70.59%), Query Frame = 3
Query:  579 FKVVVDRILRIWRGTDAGKEGAPCIIAGDEETYSHLRNLMGIEPDKYRQIRRYPGHWHILLHIVKALNGRYWGAGVEFVAQALGTDDKKSGDASNYRRAHQTLSVTYEALWTMCLEMYLEEI-TSGDIRAEDQRNADGVVEWIKAR-NVHRTFDLWAQFLLHDYPAYMTFRVALRTGNFLLRLDALRRIAEIFFITEKDRFQMLLLDHFTEMARMSPSDTKVMAELFFVALGKDAQARIGLDERQEVANRLNKTCTKRILSSSLGKMAPLAR 1388
             K  + R+  IW G+ AGK GAP I+ GDEETY H+ ++M  +P +YRQ+RRYPG WH+LLH+ K +  RYWGAGVEFVA+ LGTD  KSG+ SNYRRAH      + A   +C + YLE + T GD   E+    DGVV WI AR   H+TF +W QFLLHDY  Y+ FR ALRTGNF LRL+ LRRIA I F+T KD++Q L+ DH TE++  S +D +V++ELF V+ G D  ARIGLDER+EV+NRL KT  KRILSS++ K+ P+A+
Sbjct:    1 MKGAIQRVQGIWCGSLAGKAGAPFILGGDEETYKHMYHVMAQKPREYRQVRRYPGDWHLLLHMAKVMLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHAMAFWAAFIALCRQEYLESLPTPGDRPVEEDNVVDGVVRWIVARAESHKTFAVWKQFLLHDYHEYIAFRTALRTGNFRLRLEGLRRIAPILFVTGKDKYQFLVADHLTEVSGYSRNDMRVVSELFSVSHGPDTFARIGLDERKEVSNRLYKTLAKRILSSTIEKLTPIAQ 272          
BLAST of mRNA_P-littoralis_Contig186.21.1 vs. uniprot
Match: A0A6H5L1K3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1K3_9PHAE)

HSP 1 Score: 297 bits (760), Expect = 3.510e-87
Identity = 154/274 (56.20%), Postives = 194/274 (70.80%), Query Frame = 3
Query:  579 FKVVVDRILRIWRGTDAGKEGAPCIIAGDEETYSHLRNLMGIEPDKYRQIRRYPGHWHILLHIVKALNGRYWGAGVEFVAQALGTDDKKSGDASNYRRAHQTLSVTYEALWTMCLEMYLEEITSGDIRAEDQRNADGVVEWIKAR-NVHRTFDLWAQFLLHDYPAYMTFRVALRTGNFLLRLDALRRIAEIFFITEKDRFQMLL---LDHFTEMARMSPSDTKVMAELFFVALGKDAQARIGLDERQEVANRLNKTCTKRILSSSLGKMAPLAR 1388
             K    R+  IW G+ AGK  AP I+ GDEETY H+ ++M  EP +YRQ+RRYPG WH+LLH+ KA+  RYWGAGVEFVA+ LGTD  KSG+ SNYRRAH  ++    A W   + + +EE           +  DGVV WI AR   H+ F +W QFLLHDYPAY+ FR ALRTGNF LRL+ LRRIA IFFIT KD++Q L+   +DH TE++R S +D +V++ELF V+LG D  ARIGLDERQEV+NRL KT TKRILSS++ K+AP+A+
Sbjct:    1 MKGATQRVQVIWCGSLAGKAAAPFILGGDEETYKHMYHVMAQEPREYRQVRRYPGDWHLLLHMAKAMLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHIT----AFWAAFMALPVEE----------DKVVDGVVRWIVARAESHKAFAVWKQFLLHDYPAYIAFRTALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLVFLVVDHLTEVSRYSRNDMRVVSELFSVSLGPDTFARIGLDERQEVSNRLYKTLTKRILSSTIEKLAPIAQ 260          
BLAST of mRNA_P-littoralis_Contig186.21.1 vs. uniprot
Match: A0A6H5JA33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA33_9PHAE)

HSP 1 Score: 268 bits (686), Expect = 3.650e-83
Identity = 136/236 (57.63%), Postives = 171/236 (72.46%), Query Frame = 3
Query:  684 LRNLMGIEPDKYRQIRRYPGHWHILLHIVKALNGRYWGAGVEFVAQALGTDDKKSGDASNYRRAHQTLSVTYEALWTMCLEMYLEEITSGDIRAEDQRNADGVVEWIKARNVHR-TFDLWAQFLLHDYPAYMTFRVALRTGNFLLRLDALRRIAEIFFITEKDRFQMLLLDHFTEMARMSPSDTKVMAELFFVALGKDAQARIGLDERQEVANRLNKTCTKRILSSSLGKMAPLAR 1388
            + ++M  EP +YRQ+RRYPG WH LLH+ KA+  RYWGAGVEFVA+ LGTD  KSG+ SNYRRAH  ++  + A   +C E YL     GD   E+    DGVV W+ AR   R TF +W QFLLHDYPAY+ FR ALRTGNF LRL+ L RIA IFFIT KD++Q L++ H TE++R S +  +V++ELF V+L  D  ARIGLDERQEV+NRL KT TKRILSS++ K+AP+A+
Sbjct:    1 MYHVMAQEPREYRQVRRYPGDWHFLLHMAKAMLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHITAFWAAFMALCREEYLSLPMPGDRPVEEDTVVDGVVLWLVARTGSRKTFVVWKQFLLHDYPAYIAFRTALRTGNFRLRLEGLHRIAPIFFITGKDKYQFLVVHHLTEVSRYSRNGMRVVSELFSVSLAPDTFARIGLDERQEVSNRLYKTLTKRILSSTIEKLAPIAQ 236          
BLAST of mRNA_P-littoralis_Contig186.21.1 vs. uniprot
Match: A0A6H5JXE3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXE3_9PHAE)

HSP 1 Score: 261 bits (667), Expect = 1.060e-80
Identity = 133/237 (56.12%), Postives = 174/237 (73.42%), Query Frame = 3
Query:  684 LRNLMGIEPDKYRQIRRYPGHWHILLHIVKALNGRYWGAGVEFVAQALGTDDKKSGDASNYRRAHQTLSVTYEALWTMCLEMYLEEI-TSGDIRAEDQRNADGVVEWIKAR-NVHRTFDLWAQFLLHDYPAYMTFRVALRTGNFLLRLDALRRIAEIFFITEKDRFQMLLLDHFTEMARMSPSDTKVMAELFFVALGKDAQARIGLDERQEVANRLNKTCTKRILSSSLGKMAPLAR 1388
            + ++M  E  +YRQ+RRYPG WH+LLH+ KA+  RYWGAGVEFVA+ LG D+ KSG+ SNYRRA   ++    A   +C + YL+ + T GD   E+ +  DGVV WI AR   H+TF +W QFLLHDYPAY+ F  ALRTGNF LRL+ LRRIA +F IT KD++  L++DH TE++R S +D +V++ELF V+LG D  ARIGLDERQ V+NRL KT TKRILSS++ K+AP+A+
Sbjct:    1 MYHVMAQESSEYRQVRRYPGDWHLLLHMAKAMLTRYWGAGVEFVAKDLGIDESKSGEGSNYRRAFHHITWFLAAFMALCRQEYLKSLQTPGDRPVEEDKVVDGVVRWIVARAESHKTFAVWKQFLLHDYPAYIAFPTALRTGNFRLRLEGLRRIAPVFSITGKDKYHFLVVDHLTEVSRYSRNDMRVVSELFSVSLGPDTFARIGLDERQ-VSNRLYKTLTKRILSSTIEKLAPIAQ 236          
BLAST of mRNA_P-littoralis_Contig186.21.1 vs. uniprot
Match: A0A6H5JR31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR31_9PHAE)

HSP 1 Score: 274 bits (701), Expect = 2.690e-80
Identity = 142/223 (63.68%), Postives = 168/223 (75.34%), Query Frame = 3
Query:  591 VDRILRIWRGTDAGKEGAPCIIAGDEETYSHLRNLMGIEPDKYRQIRRYPGHWHILLHIVKALNGRYWGAGVEFVAQALGTDDKKSGDASNYRRAHQTLSVTYEALWTMCLEMYLEEITSGDIRAEDQRNADGV-VEWIKARNV-HRTFDLWAQFLLHDYPAYMTFRVALRTGNFLLRLDALRRIAEIFFITEKDRFQMLLLDHFTEMARMSPSDTKVMAELF 1253
            +DRILRIWRGTDAGK+G PCIIAGDEETY  L ++   E   YRQ RRYPG WH+LLH+ KAL  R WGAGVEFVA+ LGTD+ KS + SNYRRAH  L V +EAL ++C EM L       + AED   AD + V WI  R   H+TF LW QFLLHD+PAYMTFR+ALRTG+F+LRLDAL RIA IF+IT KDR+Q+L++DH  EM+RMS SD +VMAELF
Sbjct:  542 IDRILRIWRGTDAGKDGTPCIIAGDEETYRVLYHIQKQERIAYRQFRRYPGDWHLLLHMAKALLKRCWGAGVEFVAKDLGTDNSKSSEGSNYRRAHHHLVVMWEALMSLCREMCLPP--GEGMLAED---ADSMAVAWINKRAAEHKTFALWEQFLLHDFPAYMTFRIALRTGDFMLRLDALHRIAPIFYITGKDRYQLLVVDHLAEMSRMSESDLRVMAELF 759          
BLAST of mRNA_P-littoralis_Contig186.21.1 vs. uniprot
Match: A0A6H5J9K2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9K2_9PHAE)

HSP 1 Score: 252 bits (644), Expect = 1.120e-70
Identity = 148/270 (54.81%), Postives = 172/270 (63.70%), Query Frame = 3
Query:  582 KVVVDRILRIWRGTDAGKEGAPCIIAGDEETYSHLRNLMGIEPDKYRQIRRYPGHWHILLHIVKALNGRYWGAGVEFVAQALGTDDKKSGDASNYRRAHQTLSVTYEALWTMCLEMYLEEITSGDIRAEDQRNADGVVEWIKARNV-HRTFDLWAQFLLHDYPAYMTFRVALRTGNFLLRLDALRRIAEIFFITEKDRFQMLLLDHFTEMARMSPSDTKVMAELFFVALGKDAQARIGLDERQEVANRLNKTCTKRILSSSLGKMAPLAR 1388
            K  +DRILRIWRGTDAGK+GAPCIIAG EETY  L ++   E   YRQ RR                                    KS + SNYRRAH  L V +EAL +   EM L       + AED  +   VV WIK R   H+TF LW QFLLHD+PAYMTFR ALRTG+F+LRLDALRRIA IF+IT KDR+Q L++DH  EM+RMS SD +VMAELF V+L KDA AR+GL ERQEVANRL KT TKRIL S + K+AP A+
Sbjct:  495 KAAIDRILRIWRGTDAGKDGAPCIIAGAEETYRVLYHIQKQERIAYRQFRR------------------------------------KSSEGSNYRRAHHHLVVMWEALMSSYREMCLPP--GEGMLAEDADSK--VVAWIKKRAAEHKTFALWKQFLLHDFPAYMTFRTALRTGDFMLRLDALRRIAPIFYITGKDRYQFLVVDHLAEMSRMSESDLRVMAELFSVSLSKDACARLGLGERQEVANRLYKTLTKRILPSFVHKLAPTAQ 724          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig186.21.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIA9_ECTSI8.020e-9858.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K3J0_9PHAE5.630e-9762.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L6D9_9PHAE2.270e-9659.56Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JDT2_9PHAE1.420e-9561.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYE1_9PHAE9.440e-9155.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L1K3_9PHAE3.510e-8756.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JA33_9PHAE3.650e-8357.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXE3_9PHAE1.060e-8056.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JR31_9PHAE2.690e-8063.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J9K2_9PHAE1.120e-7054.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig186contigP-littoralis_Contig186:71590..73954 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FIA9
Model size1388
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue2.73e-86
EggNOG OGs2D5KK@1|root,2SYVY@2759|Eukaryota
Cds size693
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789889.8660092-CDS-P-littoralis_Contig186:71589..722821680789889.8660092-CDS-P-littoralis_Contig186:71589..72282Pylaiella littoralis U1_48CDSP-littoralis_Contig186 71590..72282 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789889.8776093-UTR-P-littoralis_Contig186:72282..724751680789889.8776093-UTR-P-littoralis_Contig186:72282..72475Pylaiella littoralis U1_48UTRP-littoralis_Contig186 72283..72475 -
1680789889.8886583-UTR-P-littoralis_Contig186:73452..739541680789889.8886583-UTR-P-littoralis_Contig186:73452..73954Pylaiella littoralis U1_48UTRP-littoralis_Contig186 73453..73954 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig186.21.1prot_P-littoralis_Contig186.21.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig186 71590..72282 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig186.21.1

>prot_P-littoralis_Contig186.21.1 ID=prot_P-littoralis_Contig186.21.1|Name=mRNA_P-littoralis_Contig186.21.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=231bp
MGIEPDKYRQIRRYPGHWHILLHIVKALNGRYWGAGVEFVAQALGTDDKK
SGDASNYRRAHQTLSVTYEALWTMCLEMYLEEITSGDIRAEDQRNADGVV
EWIKARNVHRTFDLWAQFLLHDYPAYMTFRVALRTGNFLLRLDALRRIAE
IFFITEKDRFQMLLLDHFTEMARMSPSDTKVMAELFFVALGKDAQARIGL
DERQEVANRLNKTCTKRILSSSLGKMAPLAR
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mRNA from alignment at P-littoralis_Contig186:71590..73954-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig186.21.1 ID=mRNA_P-littoralis_Contig186.21.1|Name=mRNA_P-littoralis_Contig186.21.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2365bp|location=Sequence derived from alignment at P-littoralis_Contig186:71590..73954- (Pylaiella littoralis U1_48)
CCCAGTATTTGGCTTCTCACTATATCAAAGGGGCTCAATGGGCGAAGGCA AAGGTACCTGTCGCGAAGTTATCGACTTTTGCGCCGAGCACGGCCTGTGG GCGACGACTTCCCGAGTGGACCATAGAGAAAGTTTTCACGCGACAATCGT AAAGGACGAAGACATCCTTCCCAAGAATGCCACCTGCGCGGCCATTCCCC ACGACAACTGTGACTTTGACCCAAGAATCGGAGAACGTCAGGGAGAGGGG CCTCACATATCGACAATAGCGGCATCAGCCGTGACGGTGGGGCCCGAGGT GGGTAGGCTCGAAGACGCTTCTAAGCTGAGGCCCCGAAGGTCTCTGACGC TGGACAATATTATTTCGGGATCGGACGCGGAGGGGAGTGAGTGGCGGTAC CAGACGTTCGTGATGGACTTCCAGCGCGCCGTCTTCAACAGTGCGTCGAT GAGGTTAAGCGGATCAAATGTGTCTACATGCATGGAGGCTGAACTCCGAA AGGTGAGATGTTCTTCGAATAGTGATAAAAATAGATATCCATGTATATTC ACTCTGTTGTTTCACGCCACCTCTCGGACGGAGATTTGGGTCGTGGGGTA AATATTCGTAGGCCACGAATCAGTGTCTTCTGACGGTGGGTTTTCTTTAC CGCTGAGTATCGCAAGGGGAATGTTCGCACGGGAAGCATTTATCAAGATC GACTGTGCGGGAAGTTTTAATCAAGATCGTGTCCATACTGATGCGAGTCT GTTTTCAGAACGTTTTATCTTTGTTCGACAGCGTGCACTAAAACAATACG CTTGATCTGTGACATTATTATAGCCATCATGTGTGTTCGATCGTCAAAGT ACAATAGCTTTGGTGGTGATCTTAACGTAATGGTCGTACAGAATATAGCA TAAGACGCATACGTAATAACATAAAAAAATAGCTTTTACTGATGACCATT TTTGAGTCGAAATACCTATTCGAAGAATTTTCCTTCGAAGACCTTTGTTG CTATTTAAAAACACCAGGGTAAGGGCGCAGCAATGGGCCACAACGTTCGA GAGTTTGGTGACATTCGAAGTGGACGCCTTCGGCTAACCCTCACTCTTGG CCTTGGATCTCATGGCAAAAAGTGACACGAAGTTAAGTTGCGACTCTGGA TTGTGGGCGAAAAGCGCCCTTAGTTTAACAACAGTTCTGCAATCAATTGT TTCCATGCAGTGATGAGCCAAACCAAAATATTCCCCAAAGAGGTACCGCA ATAAGAGAGAATAAAAACTGACACGGGCTCGTACCAAACATCACATGACC GACCAAACTTGTTGGACATGCGGAGTACAACTAGATGGTCTGAGTGTTCC CTCTCGAGCTTCACTCTTTGTTTCTTGTCTTGGTTTTGTTTGATCCATAA AACAGATTATACTTTAGCAAACGTTCGTTCACTCTTTCGTCGGGTTTGAA ACCCCTCCCTTCGACACTCTCCAACGCAGGCCATAACTCCGGAGAAAATA GCTGCGGTAGAGTTCGTGTACGCGTTCATCATGCTCGCAAGCACCAAGAG CTTTATTCAAGGTGGTAGTGGACCGAATTCTCCGCATTTGGCGGGGGACT GACGCTGGCAAGGAAGGTGCGCCTTGCATCATCGCGGGAGACGAGGAGAC GTATTCTCATCTGCGAAATCTGATGGGAATAGAACCCGACAAATACCGTC AGATTCGTCGGTATCCAGGCCATTGGCATATCCTTCTTCACATTGTGAAG GCTCTGAACGGACGTTATTGGGGCGCCGGCGTCGAGTTTGTCGCGCAAGC CTTGGGCACTGACGACAAGAAGTCTGGTGACGCGAGCAACTACCGCAGGG CCCACCAGACTCTCTCAGTGACGTACGAAGCTCTTTGGACTATGTGCCTT GAGATGTACCTCGAGGAAATAACGAGTGGAGACATACGGGCAGAGGACCA GCGCAACGCGGACGGGGTGGTTGAGTGGATCAAAGCGCGGAATGTGCACA GGACGTTCGATCTGTGGGCGCAGTTCCTGCTTCATGACTACCCGGCGTAC ATGACCTTCCGGGTCGCCCTGCGTACGGGCAATTTTTTGCTTAGGCTGGA CGCCCTTCGACGCATCGCCGAAATCTTCTTCATCACCGAGAAGGACCGCT TCCAGATGCTCCTGTTGGACCACTTCACGGAAATGGCGCGTATGTCACCT TCGGATACAAAAGTGATGGCCGAGCTCTTCTTCGTCGCCCTCGGCAAAGA TGCGCAGGCACGAATTGGCTTGGATGAGAGGCAGGAGGTGGCGAACCGCT TGAACAAGACTTGCACAAAGAGGATCCTTTCTAGTTCTTTGGGAAAGATG GCGCCGTTAGCTCGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig186:71590..73954-

>mRNA_P-littoralis_Contig186.21.1 ID=mRNA_P-littoralis_Contig186.21.1|Name=mRNA_P-littoralis_Contig186.21.1|organism=Pylaiella littoralis U1_48|type=CDS|length=693bp|location=Sequence derived from alignment at P-littoralis_Contig186:71590..73954- (Pylaiella littoralis U1_48)
ATGGGAATAGAACCCGACAAATACCGTCAGATTCGTCGGTATCCAGGCCA
TTGGCATATCCTTCTTCACATTGTGAAGGCTCTGAACGGACGTTATTGGG
GCGCCGGCGTCGAGTTTGTCGCGCAAGCCTTGGGCACTGACGACAAGAAG
TCTGGTGACGCGAGCAACTACCGCAGGGCCCACCAGACTCTCTCAGTGAC
GTACGAAGCTCTTTGGACTATGTGCCTTGAGATGTACCTCGAGGAAATAA
CGAGTGGAGACATACGGGCAGAGGACCAGCGCAACGCGGACGGGGTGGTT
GAGTGGATCAAAGCGCGGAATGTGCACAGGACGTTCGATCTGTGGGCGCA
GTTCCTGCTTCATGACTACCCGGCGTACATGACCTTCCGGGTCGCCCTGC
GTACGGGCAATTTTTTGCTTAGGCTGGACGCCCTTCGACGCATCGCCGAA
ATCTTCTTCATCACCGAGAAGGACCGCTTCCAGATGCTCCTGTTGGACCA
CTTCACGGAAATGGCGCGTATGTCACCTTCGGATACAAAAGTGATGGCCG
AGCTCTTCTTCGTCGCCCTCGGCAAAGATGCGCAGGCACGAATTGGCTTG
GATGAGAGGCAGGAGGTGGCGAACCGCTTGAACAAGACTTGCACAAAGAG
GATCCTTTCTAGTTCTTTGGGAAAGATGGCGCCGTTAGCTCGA
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