mRNA_P-littoralis_Contig186.21.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig186.21.1 vs. uniprot
Match: D7FIA9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIA9_ECTSI) HSP 1 Score: 318 bits (814), Expect = 8.020e-98 Identity = 158/272 (58.09%), Postives = 201/272 (73.90%), Query Frame = 3
Query: 579 FKVVVDRILRIWRGTDAGKEGAPCIIAGDEETYSHLRNLMGIEPDKYRQIRRYPGHWHILLHIVKALNGRYWGAGVEFVAQALGTDDKKSGDASNYRRAHQTLSVTYEALWTMCLEMYLEEI-TSGDIRAEDQRNADGVVEWIKARNVHR-TFDLWAQFLLHDYPAYMTFRVALRTGNFLLRLDALRRIAEIFFITEKDRFQMLLLDHFTEMARMSPSDTKVMAELFFVALGKDAQARIGLDERQEVANRLNKTCTKRILSSSLGKMAPLAR 1388
K + R+ IW G+ AGK GAP I+ GDEETY H+ ++M +P +YRQ+RRYPG WH+LLH+ KA+ RYWGAGVEFVA+ LGTD KSG+ SNYRRAH ++ + A +C E YL+ + T D E+ + DGVV WI AR R TF +W QFLLHDYPAY+ FR ALRTGNF LRL+ LRRIA IFFIT KD++Q L++DH TE++R +D +V++ELF V+LG D ARIGLDERQEV+NRL KT TKRILSS++ K+AP+A+
Sbjct: 131 MKGAIQRVQGIWCGSPAGKAGAPFILGGDEETYKHMYHVMAQDPREYRQVRRYPGDWHLLLHMAKAMLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHITAFWAAFMALCREEYLKSLPTPSDRPVEEDKVVDGVVRWIVARAESRKTFAVWKQFLLHDYPAYIAFRTALRTGNFGLRLEGLRRIAPIFFITGKDKYQFLVVDHLTEVSRYLRNDMRVVSELFSVSLGPDTFARIGLDERQEVSNRLYKTLTKRILSSTIEKLAPIAQ 402
BLAST of mRNA_P-littoralis_Contig186.21.1 vs. uniprot
Match: A0A6H5K3J0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3J0_9PHAE) HSP 1 Score: 312 bits (799), Expect = 5.630e-97 Identity = 167/266 (62.78%), Postives = 198/266 (74.44%), Query Frame = 3
Query: 591 VDRILRIWRGTDAGKEGAPCIIAGDEETYSHLRNLMGIEPDKYRQIRRYPGHWHILLHIVKALNGRYWGAGVEFVAQALGTDDKKSGDASNYRRAHQTLSVTYEALWTMCLEMYLEEITSGDIRAEDQRNADGVVEWIKARNV-HRTFDLWAQFLLHDYPAYMTFRVALRTGNFLLRLDALRRIAEIFFITEKDRFQMLLLDHFTEMARMSPSDTKVMAELFFVALGKDAQARIGLDERQEVANRLNKTCTKRILSSSLGKMAPLA 1385
VDRILRIWRGT AGK GAPCIIAGDEETY L ++ E YRQ+RRYPG WH+LLH+ KAL RYWGAGVEFVA+ LGTD+ KS + SNYRRAH L V +EA ++C +M L D+ AED + VV WIK R H+TF LW QFLLHD+PAYM FR ALRTG+F+LRLDALRRIA IF+IT KDR+Q L++D EM+RMS SD KV+ +LF V+L KDA AR+GLDERQ + NR+ KT TKRIL S + K+AP A
Sbjct: 182 VDRILRIWRGTVAGKNGAPCIIAGDEETYRVLYHIQKQERMAYRQLRRYPGDWHLLLHMAKALLKRYWGAGVEFVAKDLGTDNSKSSEGSNYRRAHHHLVVMWEARMSLCPKMCLPP--GEDMTAEDADSM--VVAWIKKRAAEHKTFALWQQFLLHDFPAYMAFRTALRTGDFMLRLDALRRIAPIFYITGKDRYQFLVVD-LAEMSRMSESDLKVIVKLFSVSLSKDACARLGLDERQGLTNRMYKTLTKRILPSFIHKLAPTA 442
BLAST of mRNA_P-littoralis_Contig186.21.1 vs. uniprot
Match: A0A6H5L6D9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D9_9PHAE) HSP 1 Score: 328 bits (841), Expect = 2.270e-96 Identity = 162/272 (59.56%), Postives = 203/272 (74.63%), Query Frame = 3
Query: 579 FKVVVDRILRIWRGTDAGKEGAPCIIAGDEETYSHLRNLMGIEPDKYRQIRRYPGHWHILLHIVKALNGRYWGAGVEFVAQALGTDDKKSGDASNYRRAHQTLSVTYEALWTMCLEMYLEEI-TSGDIRAEDQRNADGVVEWIKARNV-HRTFDLWAQFLLHDYPAYMTFRVALRTGNFLLRLDALRRIAEIFFITEKDRFQMLLLDHFTEMARMSPSDTKVMAELFFVALGKDAQARIGLDERQEVANRLNKTCTKRILSSSLGKMAPLAR 1388
K + RI IW G+ AGK GAP I+ GDEETY H+ ++M EP +YRQ+RRYPG WH+LLH+ KA+ RYWGAGVEFVA+ LGTD KSG+ SNYRRAH ++ + A +C E YL+ + T GD E+ DGVV WI AR H+TF +W QFLLHDYPAY+ FR ALRTGNF LRL+ LRRIA IFFIT KD++Q L++DH TE++R S +D +V++ELF V+LG D ARIGLDERQEV+NRL KT TKRILSS++ K+AP+A+
Sbjct: 890 MKAAIQRIQGIWCGSPAGKAGAPFILGGDEETYKHMYHVMAQEPREYRQVRRYPGDWHLLLHMAKAMLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHITAFWAAFMALCREEYLKSLSTPGDRPVEEDEVVDGVVRWIVARTESHKTFAVWKQFLLHDYPAYIAFRTALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLVVDHLTEVSRYSRNDMRVVSELFSVSLGPDTFARIGLDERQEVSNRLYKTLTKRILSSTIEKLAPIAQ 1161
BLAST of mRNA_P-littoralis_Contig186.21.1 vs. uniprot
Match: A0A6H5JDT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDT2_9PHAE) HSP 1 Score: 310 bits (794), Expect = 1.420e-95 Identity = 166/269 (61.71%), Postives = 193/269 (71.75%), Query Frame = 3
Query: 582 KVVVDRILRIWRGTDAGKEGAPCIIAGDEETYSHLRNLMGIEPDKYRQIRRYPGHWHILLHIVKALNGRYWGAGVEFVAQALGTDDKKSGDASNYRRAHQTLSVTYEALWTMCLEMYLEEITSGDIRAEDQRNADGVVEWIKARNV-HRTFDLWAQFLLHDYPAYMTFRVALRTGNFLLRLDALRRIAEIFFITEKDRFQMLLLDHFTEMARMSPSDTKVMAELFFVALGKDAQARIGLDERQEVANRLNKTCTKRILSSSLGKMAPLA 1385
K +D ILRIWRGT AGK+GAPCIIAGDEETY L ++ E YRQ RRYPG WH+ LH+ KAL RYWGAGVEFVA+ LGTD+ KS + SNYRRAH L V T GD+ AED + VV WIK R H+TF LW QFLLHD+PAY+TFR ALRTG+F+LRLDALRRIA IF+IT KDR+Q L++DH EM+ MS SD KV+AELF V+L KDA AR+GLDERQEVANR+ KT TK IL S + K+AP A
Sbjct: 193 KAAIDCILRIWRGTVAGKDGAPCIIAGDEETYRVLYHIQKQERVAYRQFRRYPGDWHLHLHVAKALLKRYWGAGVEFVAKDLGTDNSKSSEGSNYRRAHHHLVVMAS--------------TRGDMTAEDADSM--VVAWIKKRAAKHKTFALWEQFLLHDFPAYVTFRTALRTGDFMLRLDALRRIAPIFYITGKDRYQFLVVDHLAEMSTMSESDLKVIAELFSVSLSKDACARLGLDERQEVANRMYKTLTKWILPSFIHKLAPTA 445
BLAST of mRNA_P-littoralis_Contig186.21.1 vs. uniprot
Match: A0A6H5JYE1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYE1_9PHAE) HSP 1 Score: 301 bits (770), Expect = 9.440e-91 Identity = 150/272 (55.15%), Postives = 192/272 (70.59%), Query Frame = 3
Query: 579 FKVVVDRILRIWRGTDAGKEGAPCIIAGDEETYSHLRNLMGIEPDKYRQIRRYPGHWHILLHIVKALNGRYWGAGVEFVAQALGTDDKKSGDASNYRRAHQTLSVTYEALWTMCLEMYLEEI-TSGDIRAEDQRNADGVVEWIKAR-NVHRTFDLWAQFLLHDYPAYMTFRVALRTGNFLLRLDALRRIAEIFFITEKDRFQMLLLDHFTEMARMSPSDTKVMAELFFVALGKDAQARIGLDERQEVANRLNKTCTKRILSSSLGKMAPLAR 1388
K + R+ IW G+ AGK GAP I+ GDEETY H+ ++M +P +YRQ+RRYPG WH+LLH+ K + RYWGAGVEFVA+ LGTD KSG+ SNYRRAH + A +C + YLE + T GD E+ DGVV WI AR H+TF +W QFLLHDY Y+ FR ALRTGNF LRL+ LRRIA I F+T KD++Q L+ DH TE++ S +D +V++ELF V+ G D ARIGLDER+EV+NRL KT KRILSS++ K+ P+A+
Sbjct: 1 MKGAIQRVQGIWCGSLAGKAGAPFILGGDEETYKHMYHVMAQKPREYRQVRRYPGDWHLLLHMAKVMLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHAMAFWAAFIALCRQEYLESLPTPGDRPVEEDNVVDGVVRWIVARAESHKTFAVWKQFLLHDYHEYIAFRTALRTGNFRLRLEGLRRIAPILFVTGKDKYQFLVADHLTEVSGYSRNDMRVVSELFSVSHGPDTFARIGLDERKEVSNRLYKTLAKRILSSTIEKLTPIAQ 272
BLAST of mRNA_P-littoralis_Contig186.21.1 vs. uniprot
Match: A0A6H5L1K3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1K3_9PHAE) HSP 1 Score: 297 bits (760), Expect = 3.510e-87 Identity = 154/274 (56.20%), Postives = 194/274 (70.80%), Query Frame = 3
Query: 579 FKVVVDRILRIWRGTDAGKEGAPCIIAGDEETYSHLRNLMGIEPDKYRQIRRYPGHWHILLHIVKALNGRYWGAGVEFVAQALGTDDKKSGDASNYRRAHQTLSVTYEALWTMCLEMYLEEITSGDIRAEDQRNADGVVEWIKAR-NVHRTFDLWAQFLLHDYPAYMTFRVALRTGNFLLRLDALRRIAEIFFITEKDRFQMLL---LDHFTEMARMSPSDTKVMAELFFVALGKDAQARIGLDERQEVANRLNKTCTKRILSSSLGKMAPLAR 1388
K R+ IW G+ AGK AP I+ GDEETY H+ ++M EP +YRQ+RRYPG WH+LLH+ KA+ RYWGAGVEFVA+ LGTD KSG+ SNYRRAH ++ A W + + +EE + DGVV WI AR H+ F +W QFLLHDYPAY+ FR ALRTGNF LRL+ LRRIA IFFIT KD++Q L+ +DH TE++R S +D +V++ELF V+LG D ARIGLDERQEV+NRL KT TKRILSS++ K+AP+A+
Sbjct: 1 MKGATQRVQVIWCGSLAGKAAAPFILGGDEETYKHMYHVMAQEPREYRQVRRYPGDWHLLLHMAKAMLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHIT----AFWAAFMALPVEE----------DKVVDGVVRWIVARAESHKAFAVWKQFLLHDYPAYIAFRTALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLVFLVVDHLTEVSRYSRNDMRVVSELFSVSLGPDTFARIGLDERQEVSNRLYKTLTKRILSSTIEKLAPIAQ 260
BLAST of mRNA_P-littoralis_Contig186.21.1 vs. uniprot
Match: A0A6H5JA33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA33_9PHAE) HSP 1 Score: 268 bits (686), Expect = 3.650e-83 Identity = 136/236 (57.63%), Postives = 171/236 (72.46%), Query Frame = 3
Query: 684 LRNLMGIEPDKYRQIRRYPGHWHILLHIVKALNGRYWGAGVEFVAQALGTDDKKSGDASNYRRAHQTLSVTYEALWTMCLEMYLEEITSGDIRAEDQRNADGVVEWIKARNVHR-TFDLWAQFLLHDYPAYMTFRVALRTGNFLLRLDALRRIAEIFFITEKDRFQMLLLDHFTEMARMSPSDTKVMAELFFVALGKDAQARIGLDERQEVANRLNKTCTKRILSSSLGKMAPLAR 1388
+ ++M EP +YRQ+RRYPG WH LLH+ KA+ RYWGAGVEFVA+ LGTD KSG+ SNYRRAH ++ + A +C E YL GD E+ DGVV W+ AR R TF +W QFLLHDYPAY+ FR ALRTGNF LRL+ L RIA IFFIT KD++Q L++ H TE++R S + +V++ELF V+L D ARIGLDERQEV+NRL KT TKRILSS++ K+AP+A+
Sbjct: 1 MYHVMAQEPREYRQVRRYPGDWHFLLHMAKAMLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHITAFWAAFMALCREEYLSLPMPGDRPVEEDTVVDGVVLWLVARTGSRKTFVVWKQFLLHDYPAYIAFRTALRTGNFRLRLEGLHRIAPIFFITGKDKYQFLVVHHLTEVSRYSRNGMRVVSELFSVSLAPDTFARIGLDERQEVSNRLYKTLTKRILSSTIEKLAPIAQ 236
BLAST of mRNA_P-littoralis_Contig186.21.1 vs. uniprot
Match: A0A6H5JXE3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXE3_9PHAE) HSP 1 Score: 261 bits (667), Expect = 1.060e-80 Identity = 133/237 (56.12%), Postives = 174/237 (73.42%), Query Frame = 3
Query: 684 LRNLMGIEPDKYRQIRRYPGHWHILLHIVKALNGRYWGAGVEFVAQALGTDDKKSGDASNYRRAHQTLSVTYEALWTMCLEMYLEEI-TSGDIRAEDQRNADGVVEWIKAR-NVHRTFDLWAQFLLHDYPAYMTFRVALRTGNFLLRLDALRRIAEIFFITEKDRFQMLLLDHFTEMARMSPSDTKVMAELFFVALGKDAQARIGLDERQEVANRLNKTCTKRILSSSLGKMAPLAR 1388
+ ++M E +YRQ+RRYPG WH+LLH+ KA+ RYWGAGVEFVA+ LG D+ KSG+ SNYRRA ++ A +C + YL+ + T GD E+ + DGVV WI AR H+TF +W QFLLHDYPAY+ F ALRTGNF LRL+ LRRIA +F IT KD++ L++DH TE++R S +D +V++ELF V+LG D ARIGLDERQ V+NRL KT TKRILSS++ K+AP+A+
Sbjct: 1 MYHVMAQESSEYRQVRRYPGDWHLLLHMAKAMLTRYWGAGVEFVAKDLGIDESKSGEGSNYRRAFHHITWFLAAFMALCRQEYLKSLQTPGDRPVEEDKVVDGVVRWIVARAESHKTFAVWKQFLLHDYPAYIAFPTALRTGNFRLRLEGLRRIAPVFSITGKDKYHFLVVDHLTEVSRYSRNDMRVVSELFSVSLGPDTFARIGLDERQ-VSNRLYKTLTKRILSSTIEKLAPIAQ 236
BLAST of mRNA_P-littoralis_Contig186.21.1 vs. uniprot
Match: A0A6H5JR31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR31_9PHAE) HSP 1 Score: 274 bits (701), Expect = 2.690e-80 Identity = 142/223 (63.68%), Postives = 168/223 (75.34%), Query Frame = 3
Query: 591 VDRILRIWRGTDAGKEGAPCIIAGDEETYSHLRNLMGIEPDKYRQIRRYPGHWHILLHIVKALNGRYWGAGVEFVAQALGTDDKKSGDASNYRRAHQTLSVTYEALWTMCLEMYLEEITSGDIRAEDQRNADGV-VEWIKARNV-HRTFDLWAQFLLHDYPAYMTFRVALRTGNFLLRLDALRRIAEIFFITEKDRFQMLLLDHFTEMARMSPSDTKVMAELF 1253
+DRILRIWRGTDAGK+G PCIIAGDEETY L ++ E YRQ RRYPG WH+LLH+ KAL R WGAGVEFVA+ LGTD+ KS + SNYRRAH L V +EAL ++C EM L + AED AD + V WI R H+TF LW QFLLHD+PAYMTFR+ALRTG+F+LRLDAL RIA IF+IT KDR+Q+L++DH EM+RMS SD +VMAELF
Sbjct: 542 IDRILRIWRGTDAGKDGTPCIIAGDEETYRVLYHIQKQERIAYRQFRRYPGDWHLLLHMAKALLKRCWGAGVEFVAKDLGTDNSKSSEGSNYRRAHHHLVVMWEALMSLCREMCLPP--GEGMLAED---ADSMAVAWINKRAAEHKTFALWEQFLLHDFPAYMTFRIALRTGDFMLRLDALHRIAPIFYITGKDRYQLLVVDHLAEMSRMSESDLRVMAELF 759
BLAST of mRNA_P-littoralis_Contig186.21.1 vs. uniprot
Match: A0A6H5J9K2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9K2_9PHAE) HSP 1 Score: 252 bits (644), Expect = 1.120e-70 Identity = 148/270 (54.81%), Postives = 172/270 (63.70%), Query Frame = 3
Query: 582 KVVVDRILRIWRGTDAGKEGAPCIIAGDEETYSHLRNLMGIEPDKYRQIRRYPGHWHILLHIVKALNGRYWGAGVEFVAQALGTDDKKSGDASNYRRAHQTLSVTYEALWTMCLEMYLEEITSGDIRAEDQRNADGVVEWIKARNV-HRTFDLWAQFLLHDYPAYMTFRVALRTGNFLLRLDALRRIAEIFFITEKDRFQMLLLDHFTEMARMSPSDTKVMAELFFVALGKDAQARIGLDERQEVANRLNKTCTKRILSSSLGKMAPLAR 1388
K +DRILRIWRGTDAGK+GAPCIIAG EETY L ++ E YRQ RR KS + SNYRRAH L V +EAL + EM L + AED + VV WIK R H+TF LW QFLLHD+PAYMTFR ALRTG+F+LRLDALRRIA IF+IT KDR+Q L++DH EM+RMS SD +VMAELF V+L KDA AR+GL ERQEVANRL KT TKRIL S + K+AP A+
Sbjct: 495 KAAIDRILRIWRGTDAGKDGAPCIIAGAEETYRVLYHIQKQERIAYRQFRR------------------------------------KSSEGSNYRRAHHHLVVMWEALMSSYREMCLPP--GEGMLAEDADSK--VVAWIKKRAAEHKTFALWKQFLLHDFPAYMTFRTALRTGDFMLRLDALRRIAPIFYITGKDRYQFLVVDHLAEMSRMSESDLRVMAELFSVSLSKDACARLGLGERQEVANRLYKTLTKRILPSFVHKLAPTAQ 724 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig186.21.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig186.21.1 >prot_P-littoralis_Contig186.21.1 ID=prot_P-littoralis_Contig186.21.1|Name=mRNA_P-littoralis_Contig186.21.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=231bp MGIEPDKYRQIRRYPGHWHILLHIVKALNGRYWGAGVEFVAQALGTDDKKback to top mRNA from alignment at P-littoralis_Contig186:71590..73954- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig186.21.1 ID=mRNA_P-littoralis_Contig186.21.1|Name=mRNA_P-littoralis_Contig186.21.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2365bp|location=Sequence derived from alignment at P-littoralis_Contig186:71590..73954- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig186:71590..73954- >mRNA_P-littoralis_Contig186.21.1 ID=mRNA_P-littoralis_Contig186.21.1|Name=mRNA_P-littoralis_Contig186.21.1|organism=Pylaiella littoralis U1_48|type=CDS|length=693bp|location=Sequence derived from alignment at P-littoralis_Contig186:71590..73954- (Pylaiella littoralis U1_48)back to top |