mRNA_P-littoralis_Contig186.17.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig186.17.1 vs. uniprot
Match: D8LGJ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGJ2_ECTSI) HSP 1 Score: 100 bits (249), Expect = 8.590e-24 Identity = 46/72 (63.89%), Postives = 57/72 (79.17%), Query Frame = 2
Query: 5 LTREQVVSMTSAIGATTPFCMANATGGAKHANKAQGPLEWVTANIPDGFTHDQHYTAEAHGVDLPVSIHQGV 220
+T++Q++ M ++IGA TP+ MANATGGAKHANKA GP +WV + DGF D Y A+AHGVDLPVSIHQGV
Sbjct: 213 VTQDQMLEMVASIGAATPYSMANATGGAKHANKAAGPGKWVREHCADGFADDPFYEADAHGVDLPVSIHQGV 284
BLAST of mRNA_P-littoralis_Contig186.17.1 vs. uniprot
Match: A0A6H5J9K2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9K2_9PHAE) HSP 1 Score: 102 bits (253), Expect = 1.510e-23 Identity = 49/74 (66.22%), Postives = 56/74 (75.68%), Query Frame = 2
Query: 5 LTREQVVSMTSAIGATTPFCMANATGGAKHANKAQGPLEWVTANIPDGFTHDQHYTAEAHGVDLPVSIHQGVRQ 226
LT EQVV M + IGA+TPFCMANATGGAKHANK+ P +W+ + D + YTA AHGVDLPVSIHQGVRQ
Sbjct: 869 LTEEQVVDMATKIGASTPFCMANATGGAKHANKSADPTKWLQDHSSDAVADEPFYTACAHGVDLPVSIHQGVRQ 942
BLAST of mRNA_P-littoralis_Contig186.17.1 vs. uniprot
Match: D8LEN1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEN1_ECTSI) HSP 1 Score: 100 bits (249), Expect = 5.020e-23 Identity = 46/72 (63.89%), Postives = 57/72 (79.17%), Query Frame = 2
Query: 5 LTREQVVSMTSAIGATTPFCMANATGGAKHANKAQGPLEWVTANIPDGFTHDQHYTAEAHGVDLPVSIHQGV 220
+T++Q++ M ++IGA TP+ MANATGGAKHANKA GP +WV + DGF D Y A+AHGVDLPVSIHQGV
Sbjct: 504 VTQDQMLEMVASIGAATPYSMANATGGAKHANKAAGPGKWVREHCADGFADDPFYEADAHGVDLPVSIHQGV 575
BLAST of mRNA_P-littoralis_Contig186.17.1 vs. uniprot
Match: D7FIA9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIA9_ECTSI) HSP 1 Score: 100 bits (249), Expect = 5.170e-23 Identity = 46/72 (63.89%), Postives = 57/72 (79.17%), Query Frame = 2
Query: 5 LTREQVVSMTSAIGATTPFCMANATGGAKHANKAQGPLEWVTANIPDGFTHDQHYTAEAHGVDLPVSIHQGV 220
+T++Q++ M ++IGA TP+ MANATGGAKHANKA GP +WV + DGF D Y A+AHGVDLPVSIHQGV
Sbjct: 567 VTQDQMLEMVASIGAATPYSMANATGGAKHANKAAGPGKWVREHCADGFADDPFYDADAHGVDLPVSIHQGV 638
BLAST of mRNA_P-littoralis_Contig186.17.1 vs. uniprot
Match: A0A6H5L6D9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D9_9PHAE) HSP 1 Score: 100 bits (248), Expect = 7.220e-23 Identity = 45/72 (62.50%), Postives = 57/72 (79.17%), Query Frame = 2
Query: 5 LTREQVVSMTSAIGATTPFCMANATGGAKHANKAQGPLEWVTANIPDGFTHDQHYTAEAHGVDLPVSIHQGV 220
+T++Q++ M +++GA TP+ MANATGGAKHANKA GP +WV + DGF D Y A+AHGVDLPVSIHQGV
Sbjct: 1326 VTQDQMLEMVASVGAATPYSMANATGGAKHANKAAGPGKWVREHCADGFADDPFYDADAHGVDLPVSIHQGV 1397
BLAST of mRNA_P-littoralis_Contig186.17.1 vs. uniprot
Match: A0A6H5JZK8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZK8_9PHAE) HSP 1 Score: 94.7 bits (234), Expect = 1.510e-22 Identity = 41/72 (56.94%), Postives = 54/72 (75.00%), Query Frame = 2
Query: 5 LTREQVVSMTSAIGATTPFCMANATGGAKHANKAQGPLEWVTANIPDGFTHDQHYTAEAHGVDLPVSIHQGV 220
+T++Q++ M +++GA TP+ M N TGGAKHANKA GP +WV + DGF D Y A+AHG+DLP SIHQGV
Sbjct: 12 VTQDQMLEMVTSMGAATPYSMGNVTGGAKHANKAAGPRKWVREHCADGFADDSFYDADAHGMDLPASIHQGV 83
BLAST of mRNA_P-littoralis_Contig186.17.1 vs. uniprot
Match: A0A6H5KG39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG39_9PHAE) HSP 1 Score: 99.0 bits (245), Expect = 1.760e-22 Identity = 48/74 (64.86%), Postives = 56/74 (75.68%), Query Frame = 2
Query: 5 LTREQVVSMTSAIGATTPFCMANATGGAKHANKAQGPLEWVTANIPDGFTHDQHYTAEAHGVDLPVSIHQGVRQ 226
LT EQVV M + IGA+T FCMANATGGAKHANK+ GP +W+ + + + YTA AHGVDLPVSIHQGVRQ
Sbjct: 18 LTEEQVVDMATKIGASTLFCMANATGGAKHANKSAGPTKWLQDHSSNAVADEPFYTACAHGVDLPVSIHQGVRQ 91
BLAST of mRNA_P-littoralis_Contig186.17.1 vs. uniprot
Match: A0A6H5KXZ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXZ6_9PHAE) HSP 1 Score: 96.3 bits (238), Expect = 3.110e-22 Identity = 44/73 (60.27%), Postives = 56/73 (76.71%), Query Frame = 2
Query: 5 LTREQVVSMTSAIGATTPFCMANATGGAKHANKAQGPLEWVTANIPDGFTHDQHYTAEAHGVDLPVSIHQGVR 223
+T++Q++ M ++IGA TP+ MANATGGAKHA KA GP +WV + DGF D Y A+A GVDLPVSIHQG+R
Sbjct: 12 VTQDQMLDMVASIGAATPYSMANATGGAKHATKAAGPGKWVREHCADGFAEDPSYDADARGVDLPVSIHQGMR 84
BLAST of mRNA_P-littoralis_Contig186.17.1 vs. uniprot
Match: A0A6H5K5E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5E1_9PHAE) HSP 1 Score: 98.2 bits (243), Expect = 3.400e-22 Identity = 46/74 (62.16%), Postives = 56/74 (75.68%), Query Frame = 2
Query: 5 LTREQVVSMTSAIGATTPFCMANATGGAKHANKAQGPLEWVTANIPDGFTHDQHYTAEAHGVDLPVSIHQGVRQ 226
L+ EQVV M + IGA+TPF MANATGGAKHANK++GP +W+ + D + YT A+GVDLPVSIHQGVRQ
Sbjct: 561 LSEEQVVDMATRIGASTPFSMANATGGAKHANKSEGPTKWLQDHSSDAVADEPFYTVHAYGVDLPVSIHQGVRQ 634
BLAST of mRNA_P-littoralis_Contig186.17.1 vs. uniprot
Match: A0A6H5JAK2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAK2_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 4.480e-22 Identity = 45/72 (62.50%), Postives = 56/72 (77.78%), Query Frame = 2
Query: 5 LTREQVVSMTSAIGATTPFCMANATGGAKHANKAQGPLEWVTANIPDGFTHDQHYTAEAHGVDLPVSIHQGV 220
+T+ +++ M ++IGA TP+ MANATGGAKHANKA GP +WV + DGF D Y A+AHGVDLPVSIHQGV
Sbjct: 218 VTQAKMLEMVASIGAATPYSMANATGGAKHANKAAGPGKWVREHCADGFADDPFYDADAHGVDLPVSIHQGV 289 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig186.17.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig186.17.1 >prot_P-littoralis_Contig186.17.1 ID=prot_P-littoralis_Contig186.17.1|Name=mRNA_P-littoralis_Contig186.17.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=76bp GAHEGAGGEHDVSNRSYNAFLHGERHRRGQARQQSPRSARVGHRQHTRWLback to top mRNA from alignment at P-littoralis_Contig186:64512..71120- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig186.17.1 ID=mRNA_P-littoralis_Contig186.17.1|Name=mRNA_P-littoralis_Contig186.17.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6609bp|location=Sequence derived from alignment at P-littoralis_Contig186:64512..71120- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig186:64512..71120- >mRNA_P-littoralis_Contig186.17.1 ID=mRNA_P-littoralis_Contig186.17.1|Name=mRNA_P-littoralis_Contig186.17.1|organism=Pylaiella littoralis U1_48|type=CDS|length=228bp|location=Sequence derived from alignment at P-littoralis_Contig186:64512..71120- (Pylaiella littoralis U1_48)back to top |