prot_P-littoralis_Contig185.71.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig185.71.2
Unique Name	prot_P-littoralis_Contig185.71.2
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	369

Homology

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BLAST of mRNA_P-littoralis_Contig185.71.2 vs. uniprot
Match: D7FHS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHS4_ECTSI)

HSP 1 Score: 118 bits (296), Expect = 2.180e-27
Identity = 62/76 (81.58%), Postives = 69/76 (90.79%), Query Frame = 0

Query:    7 IPADSLMLSAIKDATVSTSTINPARITSAVQKMRPEWCVNKRRVKRLLRSMNNDAWKAAVDPTVSVGNPTSSRGSS 82
            +P DS +  AIKDATVSTST+NPARITSAVQKMRP+WCVNKRRVKRLLRSMNNDAWKAAV+ TV+ GNP S+RGSS
Sbjct:   34 LPDDSTLTIAIKDATVSTSTVNPARITSAVQKMRPDWCVNKRRVKRLLRSMNNDAWKAAVNTTVNAGNP-SARGSS 108

[Close]

BLAST of mRNA_P-littoralis_Contig185.71.2 vs. uniprot
Match: A0A6H5K3S6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3S6_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 2.040e-16
Identity = 163/357 (45.66%), Postives = 172/357 (48.18%), Query Frame = 0

Query:   39 MRPEWCVNKRRVKRLLRSMNNDAWKAAVDPTVSVGNPTSSRGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVEPTAAATASRGSTRAAAXXXXXXXXXXXXLKLADKAXXXXXXXXXXXXXXXXXXXXXXSLALAGAAAA-----------AEEGGVCHTAPASPGSPVGSTYASVASSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRS-------------LSDSLTLEPDLELEPGVDLKADLGI---GPDVRERQGSDGDDCCSAGNXXXXXXXADERSEPADNLGFEMIDKAEVVGEAAVAAAAAESSGSTNGKARKAWPWAWTRSS 368
            MRP+WCVNKRRVKRLLRSMNNDAWKAAV+ TV+ GNP S RGSS                                  T  ATAS   +  A XXXXXXXXXXXX       XXXXXXXXXXXXXXXXXXXXXX                         GVC TAPASPGSP G T A+ A++     XXXXXXXXX                        XXXXXXXX                   LS+SL L  DLELEPGVDLKADLGI    P                  XXX       R+E ADNLGFEMIDKAEVVG  A            NGK RK      TRSS
Sbjct:    1 MRPDWCVNKRRVKRLLRSMNNDAWKAAVNTTVNAGNP-SGRGSST---------------------------------TTIATASEPPSAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGXXXGVCETAPASPGSPAGPTTAATAAATAVGSXXXXXXXXXAPLLSPAETVGSCQPGANCSATAGXXXXXXXXGAPWEDGGVVAPVEGGEEPLSESLDLATDLELEPGVDLKADLGIVTNAPAAXXXXXXXXXXXXXXXXXXXSAVSDSGRAEAADNLGFEMIDKAEVVGSGAGTG--------VNGKTRKXXXXXXTRSS 315

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig185.71.2 vs. uniprot

BLAST of mRNA_P-littoralis_Contig185.71.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FHS4_ECTSI	2.180e-27	81.58	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5K3S6_9PHAE	2.040e-16	45.66	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 137..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 230..268
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 344..368
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 249..267
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 289..320

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig185	contig	P-littoralis_Contig185:375674..381690 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig185.71.2	mRNA_P-littoralis_Contig185.71.2	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig185 375018..382288 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig185.71.2 ID=prot_P-littoralis_Contig185.71.2|Name=mRNA_P-littoralis_Contig185.71.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=369bp
MATISVIPADSLMLSAIKDATVSTSTINPARITSAVQKMRPEWCVNKRRV
KRLLRSMNNDAWKAAVDPTVSVGNPTSSRGSSGSSSSRDPPTTSTTTTTP
SSAGGVEASSSAAVEPTAAATASRGSTRAAAKAAKAAKAAEKALKLADKA
AAKAADKASAVAAAAKAAAESASLALAGAAAAAEEGGVCHTAPASPGSPV
GSTYASVASSVVVVGGPLLPPPPPVKTAMRAGRAPPATVPGAVAAADGGS
AAQQQQQQQTRSLSDSLTLEPDLELEPGVDLKADLGIGPDVRERQGSDGD
DCCSAGNAASAAAAADERSEPADNLGFEMIDKAEVVGEAAVAAAAAESSG
STNGKARKAWPWAWTRSS*