mRNA_P-littoralis_Contig185.37.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig185.37.1
Unique NamemRNA_P-littoralis_Contig185.37.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig185.37.1 vs. uniprot
Match: D7FHT1_ECTSI (Alpha/beta hydrolase fold n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHT1_ECTSI)

HSP 1 Score: 500 bits (1288), Expect = 4.210e-171
Identity = 254/299 (84.95%), Postives = 269/299 (89.97%), Query Frame = 1
Query:    1 MGLLSYAMTIGAIGVGLFALAKRNHEKASVPREEQFVRFKSYGDSSKQPLVIVPGLDGVTAFFSDIVPELTLNFHVIVFNLPLASPPLSAAAAEGESYGMPLIARRLAEVMDDAGIKGGASIVGESFGGMVAQRLALDFPDKVKRLVLLSSLAKPELTPIVKFKADFVLPVVEAIGYLLPFVAQSLFSVAHLPDVVEKHEPLWAKHLFLKEASWADHWSVMARTKVALSFDTTTELKRIKTGALVLFGEDDTFTATGAQQLLNGIEGSRKKGLPGGHLCHITSPKAFSREVTEYLLAGS 897
            MGLLSY MTI AIGVGLFALAKRNHE+A  PR+EQF+ FK YGD +KQPLVIVPGLDGVTAFFSDIVPEL LNFHV++FNLPLASPPLS AA EGE Y M  IARRLA VM+DAGIKGGASIVGESFGGMVAQRLALDFPDKVK LVLLSSLAK EL P VKFKADFVLPVVE+IGYLLPFVAQSLFSVAH+PDVVEK EPLWAKHL LKEASW DHWSVMARTK+AL FDTT EL+ IKTGALVLFGE+DTFTATGAQQL++GIEGSRK GLPGGHLCHITSPKAFS  VT+YLL  S
Sbjct:    1 MGLLSYLMTISAIGVGLFALAKRNHERAGAPRQEQFIPFKKYGDDTKQPLVIVPGLDGVTAFFSDIVPELALNFHVVMFNLPLASPPLSRAAVEGERYDMSYIARRLAGVMEDAGIKGGASIVGESFGGMVAQRLALDFPDKVKGLVLLSSLAKLELPPSVKFKADFVLPVVESIGYLLPFVAQSLFSVAHMPDVVEKDEPLWAKHLVLKEASWVDHWSVMARTKIALDFDTTHELENIKTGALVLFGENDTFTATGAQQLIDGIEGSRKVGLPGGHLCHITSPKAFSEAVTDYLLVSS 299          
BLAST of mRNA_P-littoralis_Contig185.37.1 vs. uniprot
Match: A0A7S2XZC0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZC0_9STRA)

HSP 1 Score: 261 bits (668), Expect = 1.870e-78
Identity = 128/261 (49.04%), Postives = 177/261 (67.82%), Query Frame = 1
Query:  106 FVRFKSYGDSSKQPLVIVPGLDGVTAFFSDIVPELTLNFHVIVFNLPLASPPLSAAAAEGESYGMPLIARRLAEVMDDAGIKGGASIVGESFGGMVAQRLALDFPDKVKRLVLLSSLAKPELTPIVKFKADFVLPVVEAIGYLLPFVAQSLFSVAHLPDVVEKHEPLWAKHLFLKEASWADHWSVMARTKVALSFDTTTELKRIKTGALVLFGEDDTFTATGAQQLLNGIEGSRKKGLPGGHLCHITSPKAFSREVTEYLL 888
            F RFK +GD S  P+V++PGLDG T+FF+D++PELT  FHV+VFNLPLA  P        E Y    +A  L  VM++ G+   A +VGESFGG++AQRLA+D+P +VK+LV+LSSLAK E+ P V FKA ++LPVVE +G   P +AQ+LF+  H+ DV+E HEP W K  F KEASWA H+SVMAR K+ +  +   E+  +    L+++G+DD FT  G++ L   I+ S    +PGGHL H+TSPK F+  V  +++
Sbjct:   28 FERFKQFGDPSNPPVVLIPGLDGCTSFFADVIPELTPKFHVVVFNLPLADEPFRKNPNRTEPYSFQYMAGELVSVMEELGLPE-AYVVGESFGGVIAQRLAIDYPRRVKKLVVLSSLAKTEMPPEVAFKAKYLLPVVETLGLAFPGLAQTLFAYLHVDDVIEPHEPEWVKQFFKKEASWAHHYSVMARLKLVIPLNMAVEVGYLPHKVLIIYGQDDHFTRKGSEHLHQIIQASEIVAMPGGHLPHVTSPKLFAELVENFIV 287          
BLAST of mRNA_P-littoralis_Contig185.37.1 vs. uniprot
Match: A0A7S3UUZ2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UUZ2_HETAK)

HSP 1 Score: 258 bits (659), Expect = 6.760e-77
Identity = 129/264 (48.86%), Postives = 173/264 (65.53%), Query Frame = 1
Query:   94 REEQFVRFKSYGDSSKQPLVIVPGLDGVTAFFSDIVPELTLNFHVIVFNLPLASPPLSAAAAEGESYGMPLIARRLAEVMDDAGIKGGASIVGESFGGMVAQRLALDFPDKVKRLVLLSSLAKPELTPIVKFKADFVLPVVEAIGYLLPFVAQSLFSVAHLPDVVEKHEPLWAKHLFLKEASWADHWSVMARTKVALSFDTTTELKRIKTGALVLFGEDDTFTATGAQQLLNGIEGSRKKGLPGGHLCHITSPKAFSREVTEYL 885
            +E  F  +K YG+    PL+I+PGLDG T+FFSD++PE T  ++V+VFNLPLA  P      +  +Y    IA  L +VMD   I   A ++GESFGG+VAQ+  +D PD V RLV+LSSLAK ++ PI+ FKA+++LP V  +G L P  AQ+LF+  H+ DV+E HEP W K  F KEASWA H+SVMAR  + +  D   E+K IK   L+L+G+DD FT   +  L   I  SR  GLPGGHL H+T+PK+F+ EV  +L
Sbjct:   24 KEPHFEAYKQYGNPENPPLIIIPGLDGCTSFFSDVIPEFTPMYNVVVFNLPLAPSPFQRTRKDTPAYSFKFIASELKKVMDTLSIDK-AHVIGESFGGVVAQQFTIDHPDAVDRLVVLSSLAKTDMPPIIAFKANYLLPAVRGLGLLFPGAAQTLFAHLHVGDVIEPHEPKWVKDFFKKEASWAHHYSVMARLAIVIPLDILEEVKAIKHPTLLLYGKDDHFTGKDSLILNKAIPNSRMVGLPGGHLPHLTNPKSFAAEVQAFL 286          
BLAST of mRNA_P-littoralis_Contig185.37.1 vs. uniprot
Match: F0YAM6_AURAN (AB hydrolase-1 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAM6_AURAN)

HSP 1 Score: 215 bits (548), Expect = 5.330e-61
Identity = 116/258 (44.96%), Postives = 161/258 (62.40%), Query Frame = 1
Query:  112 RFKSYGDSSKQPLVIVPGLDGVTAFFSDIVPELTLNFHVIVFNLPLASPPLSAAAAEGESYGMPLIARRLAEVMDDAGIKGGASIVGESFGGMVAQRLALDFPDKVKRLVLLSSLAKPELTPIVKFKADFVLPVVEAIGYLLPFVAQSLFSVAHLPDVVEKHEPLWAKHLFLKEASWADHWSVMARTKVALSFDTTTELKRIKTGALVLFGEDDTFTATGAQQLLNGIEGSRKKGLPGGHLCHITSPKAFSREVTEYL 885
            R+++YG+ +  P+V++PGLDG  +F++  +PELT    V+V+ LPL S      AA  ++Y    +AR LA+ +D+  I   A +VGESFGG+VA   AL+   +V RL+LLSSLAK ELT  V  K  F LPVV  IG   P VAQ++F+  H  DVVE  EP W  + F+KEASWA H SVMAR  + +  D T  +  ++    +++G DDTFT      LL  +  + K  LPGGHL H+TSPKAF+R V +++
Sbjct:   32 RYRTYGNPALPPVVLIPGLDGCASFYAGALPELTRERFVVVYELPLVS------AANRDAYTFSYLARGLADALDELDIDA-APVVGESFGGVVAMHAALEHETRVTRLLLLSSLAKTELTTEVWLKKTFALPVVRVIGRAFPNVAQTIFAYVHASDVVEASEPEWVTNFFIKEASWAHHASVMARLSIVIPLDITARVVHLRQKTRLVYGADDTFTGATTDALLALLPDADKVALPGGHLPHLTSPKAFARLVLDFV 282          
BLAST of mRNA_P-littoralis_Contig185.37.1 vs. uniprot
Match: A0A7S3ZKI3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZKI3_9STRA)

HSP 1 Score: 215 bits (547), Expect = 4.330e-60
Identity = 119/270 (44.07%), Postives = 167/270 (61.85%), Query Frame = 1
Query:  112 RFKSYGDSSKQPLVIVPGLDGVTAFFSDIVPELTLNFHVIVFNLPLASPPLSAAAAEGESYGMPLIARRLAEVMDDAGIKGGASIVGESFGGMVAQRLALDFPDKVKRLVLLSSLAKPELTPIVKFKADFVLPVVEAIGYLLPFVAQSLFSVAHLPDVVEKHEPLWAKHLFLKEASWADHWSVMARTKVALSFDTTTELKRIKTGALVLFGEDDTFTATGAQQLLNGIEGSRKKG-----------LPGGHLCHITSPKAFSREVTEYLL 888
            R+++YGD +K PLV++PGLDG T FF  +VPEL  +F V+V++LPL           G++Y    +A  +A  +D+  I+  ASI+GESFGG+VAQ +AL+  ++V+ LVLLSSLAK ELT +VKFK   +LP+VE +G   P +AQ++F+  H  DVVE  EP WA+ LF+KEASWA H SVM R K+  + D    + RI    L++ G DD+FT     +L   ++   + G           LPGGHL H+TS   F+R V + L 
Sbjct:   34 RYQTYGDRAKPPLVVIPGLDGCTVFFQGVVPELVRDFFVVVYDLPLYDG--------GQNYTFSYLANDVAAALDELAIER-ASIIGESFGGVVAQHVALEHSERVEALVLLSSLAKTELTAVVKFKLHCLLPLVEFLGRAFPGIAQTIFAKVHASDVVEASEPAWARSLFVKEASWAHHASVMQRIKIVAALDIEDRVPRIAAPVLLVRGADDSFTGHTTARLRALLQSRGQVGTFPGGAVDVVTLPGGHLPHVTSSDLFARAVRDALF 294          
BLAST of mRNA_P-littoralis_Contig185.37.1 vs. uniprot
Match: D7G1R2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1R2_ECTSI)

HSP 1 Score: 204 bits (518), Expect = 2.170e-58
Identity = 109/167 (65.27%), Postives = 121/167 (72.46%), Query Frame = 1
Query:  388 MVAQRLALDFPDKVKRLVLLSSLAKPELTPIVKFKADFVLPVVEAIGYLLPFVAQSLFSVAHLPDVVEKHEPLWAKHLFLKEASWADHWSVMARTKVALSFDTTTELKRIKTGALVLFGEDDTFTATGAQQLLNGIEGSRKKGLPGGHLCHITSPKAFSREVTEYLL 888
            MVAQRLALDFP KV R+VLLSSLAKP+LTP+V+FK                               VEKHEP WAK +FLKEAS+A HWSVMARTK+ALSFDTT ELK IKTGALVL+GEDDTFTATGAQQLL+GIEGS+  GLPGGHLCHITSPK FS+     +L
Sbjct:    1 MVAQRLALDFPAKVDRMVLLSSLAKPDLTPVVRFK-------------------------------VEKHEPRWAKRVFLKEASFAHHWSVMARTKIALSFDTTDELKDIKTGALVLYGEDDTFTATGAQQLLDGIEGSKTLGLPGGHLCHITSPKTFSKIGLPMML 136          
BLAST of mRNA_P-littoralis_Contig185.37.1 vs. uniprot
Match: A0A7S2B727_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B727_9STRA)

HSP 1 Score: 167 bits (423), Expect = 2.780e-44
Identity = 85/193 (44.04%), Postives = 121/193 (62.69%), Query Frame = 1
Query:  307 IARRLAEVMDDAGIKGGASIVGESFGGMVAQRLALDFPDKVKRLVLLSSLAKPELTPIVKFKADFVLPVVEAIGYLLPFVAQSLFSVAHLPDVVEKHEPLWAKHLFLKEASWADHWSVMARTKVALSFDTTTELKRIKTGALVLFGEDDTFTATGAQQLLNGIEGSRKKGLPGGHLCHITSPKAFSREVTEYL 885
            +A  L  V+D+ G+ G   +VGESFGG+VAQ +AL  P +VK + ++SSL   ELT  V+ KA  +LP+VEA+G+  P VAQ LF+  H+ DVVE  EP W K  F+KEASW  H+SVM R ++ +  D     K+I+   L+++G +D FT  G  +L   +  S+   LPGGHL H+T PK F+  V  ++
Sbjct:    3 MAASLVGVLDELGL-GAVHLVGESFGGVVAQHVALASPGRVKTMTIMSSLCHTELTVKVQLKAKILLPIVEALGFFFPGVAQFLFAALHVDDVVESFEPTWVKDFFVKEASWVHHYSVMKRIRLVIGLDMCERSKQIQQKTLLVYGREDNFTLPGTMELHRNLPNSQLFDLPGGHLPHLTEPKEFAAAVDAFV 194          
BLAST of mRNA_P-littoralis_Contig185.37.1 vs. uniprot
Match: A0A7Y5YM81_9PSED (Alpha/beta fold hydrolase n=1 Tax=Pseudomonas sp. C1C7 TaxID=2735272 RepID=A0A7Y5YM81_9PSED)

HSP 1 Score: 90.9 bits (224), Expect = 1.380e-16
Identity = 80/256 (31.25%), Postives = 127/256 (49.61%), Query Frame = 1
Query:  130 DSSKQPLVIVPGLDGVTAFFSDIVPELTLNFHVIVFNLPLASPPLSAAAAEGESYGMPLIARRLAEVMDDAGIKGGASIVGESFGGMVAQRLALDFPDKVKRLVLLSSLAKPELTPIVKFKADFVLPVVEAIGYLL-PFVAQSLFSVAHLPDVVEKHEPLWAKHLFLKEASWADHWSVMARTKVALSFDTTTELKRIKTGALVLFGEDDTFTA-TGAQQLLNGIEGSRKKGLPGGHLCHITSPKAFSREVTEYLLA 891
            D++ Q +V++ GL G   F+++    L  +F V+  ++  +     +AA  G    +  +A  +  V+D AG++  A +VG S GG+VAQ LA+ FP +V RLVL ++ A   +      KA   +   +A   L+   +   LFS+  L D  E+  P  +      +    + W  +      L+FD    L  I+T  LVL G DD     + A+QL  GIEG+  + +PGGHL +I S  AF RE+  +  A
Sbjct:   17 DTATQTVVLLHGLGGDAGFWANEQQALARHFRVLALDMRGSG---RSAACSGP-LSIEDLAADVVTVLDAAGVES-AHVVGFSMGGLVAQALAVTFPQRVSRLVLAATFATTNVQARHFLKAVASVYRNDASARLMYDLIVPWLFSLPFLSD--ERAAPFLSYPEDGADDQSREDW--LCLLDADLAFDGRDRLASIRTPTLVLAGADDALAPPSDAEQLARGIEGAVLRVIPGGHLFNIESADAFERELLGFFQA 263          
BLAST of mRNA_P-littoralis_Contig185.37.1 vs. uniprot
Match: A0A327KBB1_9HYPH (AB hydrolase-1 domain-containing protein n=2 Tax=Rhodoplanes piscinae TaxID=444923 RepID=A0A327KBB1_9HYPH)

HSP 1 Score: 87.8 bits (216), Expect = 1.520e-15
Identity = 75/250 (30.00%), Postives = 124/250 (49.60%), Query Frame = 1
Query:  145 PLVIVPGLDGVTAFFSDIVPELTLNFHVIVFN-LPLASPPLSAAAAEGESYGMPLIARRLAEVMDDAGIKGGASIVGESFGGMVAQRLALDFPDKVKRLVLLSSLAKPELTPIVKFKADFVLPVVEAIGYLLPFVAQSLFSVAHLPDVVEKHEPLWAKHLFLKEASWADHWSVMARTKVALSFDTTTELKRIKTGALVLFGEDDTFTATG-AQQLLNGIEGSRKKGLP-GGHLCHITSPKAFSREVTEYL 885
            PL +V GL GV A+++++VP L+ +F VI+ + +P  +   S A A   S+ +  +A  LA ++D  G      ++G S G  V Q +ALD+P+++ RLVL +  A P+      F   F +     I   +P   +      + P  + +H    AK +   +A+     ++ AR  + ++FD    L  I+   LV+  EDD  T    +++L  GI  +R   LP GGH C  T+P+ F   V  +L
Sbjct:   21 PLALVTGLGGVAAYWTNLVPVLSRSFSVILHDQIPTGA---SRARARRTSHSVEALAADLAALLDHLGCDR-CHLIGHSTGAAVGQVMALDYPERLGRLVLYAGWAGPDP----HFSYCFEIRRRALIERGVPAYNEMGPLFLYPPRWIARHRDRVAKIIADADAAPPPVEAIAARIDMIVAFDRRARLGAIRAPTLVVCAEDDILTPPHLSEELAAGIPDARLARLPWGGHACSQTAPEDFLAAVLPFL 262          
BLAST of mRNA_P-littoralis_Contig185.37.1 vs. uniprot
Match: A0A248WEU4_9HYPH (Alpha/beta hydrolase n=2 Tax=Rhizobium sp. 11515TR TaxID=2028343 RepID=A0A248WEU4_9HYPH)

HSP 1 Score: 82.8 bits (203), Expect = 7.640e-14
Identity = 77/259 (29.73%), Postives = 125/259 (48.26%), Query Frame = 1
Query:  136 SKQPLVIVPGLDGVTAFFSDIVPELTLNFHVIVFNLPLASPPLSAAAAEGESYGMPLIARRLAEVMDDAGIKGGASIVGESFGGMVAQRLALDFPDKVKRLVLLSSLAKPELTPIVKFKADFVLPVVEA-IGYLL---PFVAQSL-FSVAHLPDVVEKHEPLWAKHLFLKEASWADHWSVMARTKVALSFDTTTELKRIKTGALVLFGEDDTFTAT-GAQQLLNGIEGSRKKGLPGGHLCHITSPKAFSREVTEYLLAG 894
            S + L+++PGL G  +F++ I P L  N+ VI F+          +      Y +  IA+   E++ D G +  A +VG S GGMVAQ LALD+P+ VK LV+  S  +P+     +F++ F     EA +G LL   P V Q+L  ++ +  D ++ H       +   +A+ +       R ++ LS     EL  IK   LV+   DD       +Q+L   I G++   L G H      P+ F++ V +++  G
Sbjct:   19 SGEALLLIPGLGGSASFWAAIAPRLAENYKVISFD----HRGTGRSDRPNGKYSIARIAKDAQEILLDEGARS-AIVVGHSTGGMVAQYLALDYPELVKHLVISGSWERPDA----RFRSMF-----EARLGVLLAAGPRVYQTLTHAIGYTADYLDTHREELGIVIGGAQAALSPLAVAAGRIEMLLSDHRAGELASIKAPTLVIGATDDALIPFYHSQRLAALIPGAQLTILDGAHFYPKVHPERFAKIVRQFVEHG 263          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig185.37.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHT1_ECTSI4.210e-17184.95Alpha/beta hydrolase fold n=2 Tax=Ectocarpus TaxID... [more]
A0A7S2XZC0_9STRA1.870e-7849.04Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3UUZ2_HETAK6.760e-7748.86Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
F0YAM6_AURAN5.330e-6144.96AB hydrolase-1 domain-containing protein n=1 Tax=A... [more]
A0A7S3ZKI3_9STRA4.330e-6044.07Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
D7G1R2_ECTSI2.170e-5865.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2B727_9STRA2.780e-4444.04Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7Y5YM81_9PSED1.380e-1631.25Alpha/beta fold hydrolase n=1 Tax=Pseudomonas sp. ... [more]
A0A327KBB1_9HYPH1.520e-1530.00AB hydrolase-1 domain-containing protein n=2 Tax=R... [more]
A0A248WEU4_9HYPH7.640e-1429.73Alpha/beta hydrolase n=2 Tax=Rhizobium sp. 11515TR... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig185contigP-littoralis_Contig185:237979..246697 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1168059.KB899087_gene1863
PFAMsAbhydrolase_1,FSH1
Model size2106
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC02769
KEGG koko:K09023
KEGG ReactionR09983
KEGG Pathwayko00240,ko01100,map00240,map01100
Hectar predicted targeting categorysignal peptide
Exons9
Evalue1.1e-16
EggNOG OGsCOG2267@1|root,COG2267@2|Bacteria,1MVAI@1224|Proteobacteria,2U64E@28211|Alphaproteobacteria,3F2E5@335928|Xanthobacteraceae
DescriptionSerine aminopeptidase, S33
Cds size900
COG categoryI
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig185.37.1prot_P-littoralis_Contig185.37.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig185 237979..245491 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789887.6012027-CDS-P-littoralis_Contig185:237978..2380381680789887.6012027-CDS-P-littoralis_Contig185:237978..238038Pylaiella littoralis U1_48CDSP-littoralis_Contig185 237979..238038 +
1680789887.6115882-CDS-P-littoralis_Contig185:241980..2421391680789887.6115882-CDS-P-littoralis_Contig185:241980..242139Pylaiella littoralis U1_48CDSP-littoralis_Contig185 241981..242139 +
1680789887.6201842-CDS-P-littoralis_Contig185:242695..2428151680789887.6201842-CDS-P-littoralis_Contig185:242695..242815Pylaiella littoralis U1_48CDSP-littoralis_Contig185 242696..242815 +
1680789887.635089-CDS-P-littoralis_Contig185:243296..2433911680789887.635089-CDS-P-littoralis_Contig185:243296..243391Pylaiella littoralis U1_48CDSP-littoralis_Contig185 243297..243391 +
1680789887.6459782-CDS-P-littoralis_Contig185:243549..2436071680789887.6459782-CDS-P-littoralis_Contig185:243549..243607Pylaiella littoralis U1_48CDSP-littoralis_Contig185 243550..243607 +
1680789887.660447-CDS-P-littoralis_Contig185:244222..2443151680789887.660447-CDS-P-littoralis_Contig185:244222..244315Pylaiella littoralis U1_48CDSP-littoralis_Contig185 244223..244315 +
1680789887.6716137-CDS-P-littoralis_Contig185:244610..2447301680789887.6716137-CDS-P-littoralis_Contig185:244610..244730Pylaiella littoralis U1_48CDSP-littoralis_Contig185 244611..244730 +
1680789887.6808474-CDS-P-littoralis_Contig185:244942..2450501680789887.6808474-CDS-P-littoralis_Contig185:244942..245050Pylaiella littoralis U1_48CDSP-littoralis_Contig185 244943..245050 +
1680789887.688921-CDS-P-littoralis_Contig185:245404..2454911680789887.688921-CDS-P-littoralis_Contig185:245404..245491Pylaiella littoralis U1_48CDSP-littoralis_Contig185 245405..245491 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789887.7085733-UTR-P-littoralis_Contig185:245491..2466971680789887.7085733-UTR-P-littoralis_Contig185:245491..246697Pylaiella littoralis U1_48UTRP-littoralis_Contig185 245492..246697 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig185.37.1

>prot_P-littoralis_Contig185.37.1 ID=prot_P-littoralis_Contig185.37.1|Name=mRNA_P-littoralis_Contig185.37.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=300bp
MGLLSYAMTIGAIGVGLFALAKRNHEKASVPREEQFVRFKSYGDSSKQPL
VIVPGLDGVTAFFSDIVPELTLNFHVIVFNLPLASPPLSAAAAEGESYGM
PLIARRLAEVMDDAGIKGGASIVGESFGGMVAQRLALDFPDKVKRLVLLS
SLAKPELTPIVKFKADFVLPVVEAIGYLLPFVAQSLFSVAHLPDVVEKHE
PLWAKHLFLKEASWADHWSVMARTKVALSFDTTTELKRIKTGALVLFGED
DTFTATGAQQLLNGIEGSRKKGLPGGHLCHITSPKAFSREVTEYLLAGS*
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mRNA from alignment at P-littoralis_Contig185:237979..246697+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig185.37.1 ID=mRNA_P-littoralis_Contig185.37.1|Name=mRNA_P-littoralis_Contig185.37.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=8719bp|location=Sequence derived from alignment at P-littoralis_Contig185:237979..246697+ (Pylaiella littoralis U1_48)
ATGGGGTTGCTCTCTTATGCAATGACGATTGGTGCCATCGGCGTCGGCCT GTTTGCTTTGGTGAGGCCATGGGCGTGGTTGGATGTCGTTGTTGGTTCCT CCGACAGCAGTACTTTGCACTTCGTCCTGCTGCGTCTTCTCAGTCATCAT GACCCCCAACAGCAGAGAAGAAGCAGCAACAACACACCTGTTTGAAGGTC ATCGGTTTGTCTTGATGGGCAGGTAGTTTGGAGAGTAGTGCGCTGACTGT GCCATGTATTTCAGAACCATCTATACGCACCACGTTCTGGATCGACGGCA AATAAATGTACAACCCTACTGACAGTCCCGCCGGTGTTACACGGGATACC AAAAGAGTTTACCGGTGTTACAAGAGAAGAGTACAGAAACACTGGTAGAC GTGCTTCACTTTTTGTGTTCGTTGCAATAGCTGCTCCAGATCCTTGTCTG GAGAGAGGCGAACACATTGATGTTTTTGCAAGTTGAAAAAAAAAAGAAGG GTTTACACATCATGCATCGTCACGTAATATCTGCTGTTTGGAACATCATC AACCAAACCGCTCCGGGCAACTTCACACGTCAAAACTTGGTGAGGCTATC AAACACAGAGTGTGTGTTGCACTTGTCCACACAAAAGTTCCTGTTATGGA GCAGGGCACGATCTGCCTTGTACCGTCACATTTCTTTGTTACCGGGCCAC AGGAGGTAAGAAGTACGAAGTAGTATTACATCGATCGGTATCACGATCGG TATCATCACGCTGTTGTTGTCAGCAATAACACAAACATTATCACGCCAAG GATGATCCTAACAGCAAATATAAATTGTAAACACTCAACACATGATGTAA CCTGTGTCACACAAGACGACCACCAAATTCTATTGTTGAGCCTGATACCC TCAGGGGAGCTGCATCGGTACATTATCTGATGAGTTTAAAAGAAACATGA AAACACTCGTAGATGTATCTTGCTTTGCGTTCGTTGCAATATCTACTCAA GAAACACTAATGTTTTGTAAGATTAAAAAAAAAAATTACACCCCCCCGTC TCGCCGCAGAGAGACCCAGACAACTCTGCTTTTGTCCTAGCACTCCTCCG TACCTCATCTTGAGAGTTATGAGTTGGGGTTTTGGTAGGGTTGGGTCGGA GTCAAAGGTGGTTTCATACCTCGGCCTCGGCGTCAAAGTAGCCGTGTAGG ACAAGTCCCACGACAAGAATTTATATACTTGGTGTACTAAGAACTGTAAA TGATGTGGAACGTAGATCAGCGCTACATCGACCACCTCTACAAGTCTTTA GCCTAAATCCTATGGCACACAGATGTTGAGGAAAATATCTGCAACGGTTA TTCTCTTCAACAATTTGTCGGGTGAAAACCGGTGGGCCCAAGCTGGTCAG CATGTCTTATGGGGCGTGCGGGTTTTCGAACCTGTACGAGTATGTGGTTT CGAAGTGTCCTCCAGAAGCGCGGTGCAAGAGGTACATAGGTTGCACGATA CGTGCAGGGACCAGGCCGCACGTCCACGCACTCGCGTGCCACCATCTGTC TGACAGTAGAACGAAACCAACAAACTGCTGTACACACAGAAATGGGTTCA CAGAAGCGGCAGTCGTGGTAGGGTAGGCGATCATGCCCGGTGAGTCGTTG AATCTAGATGTTATCTTTTCGCGCCTTCGCGCGCGGTAGTTGCCATAAGA GCAACGGGCTGCTCATGACATCATGTCGTTCGCTTCCTCATGTACTCGAG CCAGGCTTCATCACGGCTCGGGTGTGGGGTTCGATTGTTTGTGCTTGTTG TGGTACTGGGTATATGTGCGCTCTACACGATCATCGCAAATAACAACAGC AACAATGCTACAGCAGTAGTAGTAGCTCGGGGATGCAGTGCGACCCCATG ATGAAGGCCGAATCGACAAAAACTCAACACCTGTCGACCAAAATTCAAAA TTTGTATGATACGTGGAGACAGACGTAATTTCGGCCCAGAATCGGTCGGA CTCGCTCCCCGATTGTTGTCGACAATTTTGAGACGACGAATTGCCAACAA TTCGTCTGCCATGGCGATGATCCAAAATTAGTTCCAACTAGATTTGAAGA TCTGTTTTCTCGTAATTGGTAACCATAAAATTCAGCCCCATATGGCCATT AAAATCAGCTGAGACTATTTTTGGGATCCCTGAGCTATGTACACAAACCT TGAAAATTCAAAAACCCTCCGTTTTAGTCGAACAGGCGATGGTGCTTTCT CGTTGTGAAATCAAATGAAGTTCATTAAACGACAGCAGACAGGAACAGAT ACCAAAGAACTCCCAAGTTCCGATTATTTCGAAACGGAGATATTAATGAT GGTGACCCTCGGTGTCATTGCCGCGACGCGGTTGTCATAGCTCGCGTGAG GCTCAACGACGGTCGCAAGAAGAGGGTGTGTGCTGCTAGGCACTTCCAAA TCGCGGTGGTGTGCACCCCTAGCAGCCAGCAGCAGCAAGCTGTGTGTGTG TGACATGCCTCTCTTCCTTTCTCTTGCCTACTCCCCCACCTGTCTCATCT CTCTCAGCGTTGTGTGATATAGACCGAAAGTTGCACATTAATCGACGCGC AGAGGCGCGGCTATCTCGGCGAACCGGGCACGAGTTTGGCAGGAAGTAGT TGTGAGGGATCCCACTGAGAAAGCCCTTTCGTACGCACCCAGCGGTTTGT GAAATGATTTTGGGTTAGTCTCGTTCTCTTGGAAACGCGCTACGATTAAT TTGCACGCTCGAACACACAAACGGACAGCCATGGTCCGAACTACACGCCC CCGAGGAGGGTATATTTTTGCATGCACACACCTCCGGGGTATATTCCAGG CGGGGTGTTCAAGGAAGAGCTCTAAAGGAAAGCTCTACACTCCATTTGTA CGCTGAATGCTGCTGCTGCGGCGGCCGTTGCTCCACCTCCAGCTCGTTGC TTTGAAAAATGATGTTTTTCGCTTTCTCATCTCCTGCTGCTACGACGCCA GGGCCTACGCACCTGATCCAAACCATCCACACGTTTGGTCAAGGTTTTTT GTGAGAGATGGCGCTCTTCGAGGTAGAAGGAAAAGGTGTAGTTCTGAGTT TATTTGAAACCAACCTGTTGTCTGTGAAGGCTAGAGACAAGGGCAGCGAA TACGATGTCAGAGTTTCAGGATTTTTTGTGGTGTTGGGCCACTGCCTCGC TGCCAGATTCCCGAGAAATGAAGCCTGATTAACACTATTAATCTTCCTGC CTATCCGACGCACTGGGTGGTAACGCCCAGTTCACAAATGGTCACACATG AAGAGGACAATGTCCAGGTAAGACTAGAAAACACGTCGGGCAGATCCAGA TGTCACCGGCCATCCAGTCCCGCCATCGTGGGCCTATTTGAACGTTTTTG GCGATTACACTTTCCGACCTGCGCAACACCGCGGAACCCGCAGCCAGCAG ACCTGCTTTTGAAAAGCCATATTTTCGGTGGAGGCGCTGACTCTCAGTGG TGTCATGCGGTTCGTAAAACTTCCGCCATTGCCCCCGCCCACAGGTCAGG TCAAGGGCTTGTCGATCACATCACAGATATCTTCAAAGCATCCACATCGG AAAGTATAGTTGGAAGCTCTTCTGGGACAGGCTTCTCATTGCCCGACCCC CGCTGTTGAGAAAGGAATGCACCTGTGATATCCTGCCGAATGTTACGCCG ACTCCGGCCGGATGTGCCATACTCTATGTCAGGTGTAAGGTCACGTCGAC GCAAAGAACGTTATCAGATCTGAGCTAGATGATCCAAGCGAAAGAAGCCA CGAGAGAACGCCTTGAACTCGAGAGCCTATTTATTTTGCAGTTGTTGTTT GTTGCATCAACAGCGACGAACAGATGCGACGGAAGTAACCGCGGAAGGTG GGCGCTAAGGCCTAACTGCTTAGCCATCCGAACCCCGGTTCCATCCTCGC AGCTTAGTCATCTCCACCCCGGGATCTACGGACTTCTGTTCGTACGACGC AGGCGAAGCGCAACCACGAGAAAGCGTCTGTGCCTCGCGAAGAGCAATTT GTCCGGTTCAAGTCGTACGGGGACAGCTCGAAGCAGCCCCTTGTCATCGT GCCGGGATTGGACGGCGTGACGGCTTTTTTTTCCGACATTGTGCCTGAGC TAACCTTGAATGTGAGCGAGGGGAGGCGGAGAGAAATGATTGAGAGGCGG CGTGAGAGCGAGGAACGGGAAGATAGCATGTGCATACTTTGTCAGCTGCT AGCAAGAGACGCGCGTGCAGAGAGAGACAGGACGAGATTAGAGTAAGTAG AGCGATAGGGATGGAAGAGACGGAGACATAGAAAACAAATGACAGAGAGA GGAGCACGTGCAGACAAGAGGCAGGACGAGAGTAGAGAAAGAGAAGCGAT AACAACAAAGAGATACAGAGAACTGGAATCACAGGACAAAAGTCACTAGT CGCACCGCAATACGGTATTCTTGCATATCCCCCCCCCCCCCCCTTTAGCT CTGAGCTGGTTTTTACTTAAAACTAGGGGAGTTCAGATCCCGCTGGCGTT CCCTGATTCTATCCCCGGGAAATATTTGCCCGATGATGCTTGTACAATTA TCCCCGGGAGATTTCGTCCCCCGTTCCAAACTATCTAAAGAATGGAACTT CGCGATTCGCAATCACTCCCTTGTTGCTCTGACGCTCGTCATTCCTTCAC CATTGGAAAACATGAAGTTTCATGTTATCGTGTTCAACTTGCCGTTGGCG TCACCGCCTCTGAGCGCAGCAGCTGCCGAGGGAGAGTCGTACGGCATGCC CTTGATCGCCAGGCGGTTAGCGGAGGTCATGGATGATGTGAGAGGAAGGC GGCGCTTGCTTTTGTCGTTGCTCAGCAGGCTAATCTCAGCTGGATGCTGA AAGAGCCCCAGCGACACCCGCGCATTTCGTTACTGTATGTGACGTTTTTG TTTGTTCTCGTGTGCGTTGATGTGCGCTTCTGCGGTAGGGATTTCCACGC CACGACCCTAAGATTATCGCGTGGCGGCTGAACTGAGGCCAACACCGATG TTAGACGGGCCTGTTTTTACACAGGTAGTACCCATCCATTTTTCGGGGGA GTGTGTTTCGTCACTGCGACAAACAGTGGTGGTTAAATATGGACCATGTC ATTGTTTTACTTTTTTCGTGCTCGATGAGAAGACACATACCGGTAGCAGC TGACCTGCCCCCCCGAGATCCATTTGGTAACTGATGACATTCAATTTAAT CGCGAAATGTACTCCCGACACCCACACCACCCTGTCCAAATTTACGTTGT CTTATTTTGGACAATCAGGCGGGAATCAAGGGCGGGGCGAGCATCGTGGG GGAAAGCTTTGGCGGTATGGTTGCTCAGCGGTTGGCTCTCGACTTTCCAG ACAAGGTCAAGCGGTGAGGCTGCGCTCGACTTGCTTCACTCTCAGTGTTG CTCCGGATTCGTTTCAAACACATGAATACGCAGCATTTGGCTATACCCCG AAAGGGATGTGATAGCCCGACGTTTTTTCGTGTTGTTTTCTTCTCGCGCC CCCTCGCTTCGTGTTTTGCAGACTGGTTCTCCTCAGCAGCCTTGCCAAGC CGGAGCTGACACCGATTGTGAAGTTTAAGGTGTGATTGCAGGGGAGGTTA GGGTGTGCCTCCTTCTCGTCTATTGCGAATGCCGTTGTTTCGAGAGATAA TCAGACAGGAAGCCAGAGGAAACGGAACGCATTAAGGAGAGAAAAAGATA ATAAGAGTGCACGGCAGAGGACGGTGAGCACGGCAGAGGACGGTGGTAGC AGAAGGTTGTTTGCTCTGCACGAGGTAAATTATGCCTTATCAGTTACGTT GCAGAGTCGGCCAAGCAGTGGGGTGTCTTGCCGCTCGCCCTTGTGGCTTG TCCTTAGTGCCCTTCCGCGCGACTCTGCCGACAATGTTCACGAGACGAGG GTTGTTTTTGTGGTCGTCGCCCTGCTGGTGGTAAAAAGCATCCTTCACCT GCTTTGCCACGGCGATGTTCAAGTTGGCGCAGAGACCTGTTACCTTGACC AACCGGTACATTCAGAACACCATCTCGATGAATTCGCGGGCGGGATGTCG TCGACGTTACCGAGGTGCATTCCTTTTGACACGTGCTGCTGCTGCTGCTG CCTCTACCACGTTGTGGATAGGTTTTCACTGCTTGATAGTTTGCCGTGTC GCCCATCGTTGGCTCAATCGTTTCTTTCCGACCTCAAAAACAAGGCTGAC TTCGTTCTGCCGGTGGTGGAGGCCATCGGCTACTTGCTGCCGTTCGTGGC GCAGAGCTTGTTCTCAGTGGCGCATCTTCCTGACGTGGTGAGAGGGTTGG TCAGCCGTCGTGCATGAGGTGGGATGGTGCGTCAAACCTTGGCGCAGAGC ATTTGTCGAGTGCACGTAAGTGGGACATGGTAGTGTGGGAGGTTGTCAAA TACCAACCGCCGTCCCTGCGTTCCATTTGTCGTGCCCATCGCCCTACCGT AGTATTGTCGATTACAGCGGTTGGTGGGAGCCTTGCCTTTTTCGCGCCTT GCCCTATGGTGAACATTTTTGAGCGTCTCGCAACACCATGCCTTTTTGAG TCGCGCTCGCCCTCTCCTCGGCTATGGCACAGGTGGAGAAGCATGAACCC TTGTGGGCAAAGCACTTGTTTTTGAAGGAAGCAAGCTGGGCAGATCATTG GTCCGTTATGGCCAGGACAAAGGTTGCCCTTTCCTTCGACACTACGACGG AGGTATGTACGAGTGTGCGTTATTCTGTCTTGATACTCCGTCAACTCAAT ATTTTTCGGAAAGCAGGAAGAGCCCCGACTTTTGCCCAGATTTCGAATTT GAATCGATAGCAAACCGTGGGCGAAGAGCAGTCGGACAAAGAGGGGCTAA TCAGGACGTGGTGTTGTTGTGGTGTTTTTGTTTGGACCCGCTTCATCGTT CGATCGACGCACAGCTAAAGAGGATCAAGACCGGCGCCCTGGTTCTGTTC GGAGAGGACGACACGTTCACGGCAACCGGTGCACAGCAGCTCCTCAACGG CATTGAAGGCTCCAGGAAGAAGGCGAGCAAGTAGGCGGTGTTAGCGCGGC AAGTCAAAGACGGGACCTGTAGCGGAATAGGTCCATGTTGCACACAGCCA AACCCTCGACTGCGGTATTAGGTCATCGGTCCAAGGTGTCTGCCGACCAC GGCCCGTGCTCGCATCACGAAGCCAGCGGTGTTGGATCAGTCCAATGACC GGCGACGCCGTTCGGTCGATCACTTTGTGTCGAATTTTCAAGCCGCTGGC ACCGAGACGTTTGACTGCCTGTTGGCTACCTTGAATCGTTTTGTCCCGTT TTGTGGAATTTGTACCCCCTGCTGTCTAATTTTGCAGCGTCCTCTGGTGT CCTCGCCGCCTCTGGTTGCTCCACAGGGCCTGCCCGGGGGACACTTGTGC CATATCACCAGCCCCAAGGCCTTCTCGCGAGAAGTCACGGAGTATCTGCT AGCTGGTTCATAACGAAGCCAATGTCCTTGTACTTTTGGGGCAAGGGGAT GAGAAGAGATGAGAGGCGACTACAGCCTTTTGGCGAGACTCTTGAGCTTA TGCACGTGTCTTCCATTCTTTGGGCACACGTACTATGGGAATGGTCGTGT ATGTACGTTCGAGTTCAATGTTGAGGTGCTTTACCAGGGCTGTTTTGGGT CGTGACTGCAGAGACCTTGACCGCAAGAGCACCGTAAACAACGCTGCTCT TGGCGTGGGTGTGATAGAATGTTTTGACGAGCAGCGTTATCCGGCGAGCA GAAGAAGAGCCGCGGCCTTCGGTAACATGCACTTTTCTGTACAGTAAGTG TAGGAGGCACCTCACCAAGCCGACGAAGGGCGAGGTGGTGGTTTTTGCAG TGTTTGTGTTCGATATACATAGTTGGGTGTTGTCAGTGTACATCCGTCGA GGATTGTTTTGCGTGATGAAGTATCGTTGGCGTTTTTCAGCGGCTGAAAT GGCAAAACCCCACCAACCCGGAAAAGCTGGGTATTTCGGTCGTTTATGAG CCGATGCCAAGTTAGTGTAGTGGAGCTTGAGCTTCCATACTGCTACGCCT ATCACGGCGCTCGGTGTTTCGGCGTATCAGTCATTTCTGGTCTTAGCTCC AGGCTGGAATGCCATCTACTCGAATATCACATGGGTGCGGGTGGAACAAA CGTATCACTTTTCTCGCTGTTACCATTGACCACACAACTCTGGTGACACG AAGCATCAGGCGTACGTTTCGGGGGGGATTAAAAAATTACATGCAGGATG GTCTGGCCAAAATAATTTCACGGTGGCTGAATGGGCTTTTCCCACCCAAT TTTTACGAATCGGACCCTGACCGTGAGTCTGGCCTTCAGATTCGGGCAGG CCACGGCTTGCGACGTGGGTGCTGTCCCCTGTGGAGGATAGGATACCTCT CCAGGGGCGTGCTTGGTACCGAGCTTTATTCCCATTCGGCAAAATATCAT TGATCGTGTTGATGCGAATGTGGTGGCGGGCAAACAAGCAACATGTAGGA GGTGCGAAACACCTAACCAAGAGTAAAAAAAGTGACACCTTCTCCACCTC TGTTGAAAAGTGTCACAAATTCGAATCTTTCTTTAAAACCTTTCAAGGGG TGATTTCTGTTGAGGCTAAAAAAAACGTTCAAGAAAATCATAGCGATGTT TTTTGGAGTGGTGTTTTTT
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Coding sequence (CDS) from alignment at P-littoralis_Contig185:237979..246697+

>mRNA_P-littoralis_Contig185.37.1 ID=mRNA_P-littoralis_Contig185.37.1|Name=mRNA_P-littoralis_Contig185.37.1|organism=Pylaiella littoralis U1_48|type=CDS|length=900bp|location=Sequence derived from alignment at P-littoralis_Contig185:237979..246697+ (Pylaiella littoralis U1_48)
ATGGGGTTGCTCTCTTATGCAATGACGATTGGTGCCATCGGCGTCGGCCT
GTTTGCTTTGGCGAAGCGCAACCACGAGAAAGCGTCTGTGCCTCGCGAAG
AGCAATTTGTCCGGTTCAAGTCGTACGGGGACAGCTCGAAGCAGCCCCTT
GTCATCGTGCCGGGATTGGACGGCGTGACGGCTTTTTTTTCCGACATTGT
GCCTGAGCTAACCTTGAATTTTCATGTTATCGTGTTCAACTTGCCGTTGG
CGTCACCGCCTCTGAGCGCAGCAGCTGCCGAGGGAGAGTCGTACGGCATG
CCCTTGATCGCCAGGCGGTTAGCGGAGGTCATGGATGATGCGGGAATCAA
GGGCGGGGCGAGCATCGTGGGGGAAAGCTTTGGCGGTATGGTTGCTCAGC
GGTTGGCTCTCGACTTTCCAGACAAGGTCAAGCGACTGGTTCTCCTCAGC
AGCCTTGCCAAGCCGGAGCTGACACCGATTGTGAAGTTTAAGGCTGACTT
CGTTCTGCCGGTGGTGGAGGCCATCGGCTACTTGCTGCCGTTCGTGGCGC
AGAGCTTGTTCTCAGTGGCGCATCTTCCTGACGTGGTGGAGAAGCATGAA
CCCTTGTGGGCAAAGCACTTGTTTTTGAAGGAAGCAAGCTGGGCAGATCA
TTGGTCCGTTATGGCCAGGACAAAGGTTGCCCTTTCCTTCGACACTACGA
CGGAGCTAAAGAGGATCAAGACCGGCGCCCTGGTTCTGTTCGGAGAGGAC
GACACGTTCACGGCAACCGGTGCACAGCAGCTCCTCAACGGCATTGAAGG
CTCCAGGAAGAAGGGCCTGCCCGGGGGACACTTGTGCCATATCACCAGCC
CCAAGGCCTTCTCGCGAGAAGTCACGGAGTATCTGCTAGCTGGTTCATAA
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