mRNA_P-littoralis_Contig185.32.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig185.32.1 vs. uniprot
Match: A0A6H5JUK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK3_9PHAE) HSP 1 Score: 316 bits (810), Expect = 1.660e-101 Identity = 151/178 (84.83%), Postives = 159/178 (89.33%), Query Frame = 2
Query: 644 RLD--CTSPEAVDALRDAVAISGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSRLSPDTNLDASLLSFRDDFLKANSGKRPDWVVTSPPYKGAVGFVKAALAVATKGAALKLPLSFLEPCADRGGWLAETPPAVCVFLRRAKYTHAHHVKVGEFWGVWYIDGGSCDNSRGSRLVFCPE 1171
RLD CT PEAV+ L++AVAI+GCVLDMCGGPEDAVAQ F TCEVLTNDVSSRLS TNLDASLLSFRD+F KAN GK+PDWVVTSPPYKGAVGFVKAALAVATKG ALKLPLSFLEPCADRGGWL + PPAVC+FLRRAKYTHAHHVKVGEFWGVWY DGG C S GSRLVFCPE
Sbjct: 125 RLDRYCTLPEAVEVLQNAVAIAGCVLDMCGGPEDAVAQGFRSTCEVLTNDVSSRLSAGTNLDASLLSFRDNFRKANPGKQPDWVVTSPPYKGAVGFVKAALAVATKGVALKLPLSFLEPCADRGGWLVDNPPAVCIFLRRAKYTHAHHVKVGEFWGVWYTDGGCCGKSGGSRLVFCPE 302
BLAST of mRNA_P-littoralis_Contig185.32.1 vs. uniprot
Match: D7G0Y0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Y0_ECTSI) HSP 1 Score: 239 bits (610), Expect = 5.370e-73 Identity = 115/173 (66.47%), Postives = 131/173 (75.72%), Query Frame = 2
Query: 653 CTSPEAVDALRDAVAISGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSRLSPDTNLDASLLSFRDDFLKANSGKRPDWVVTSPPYKGAVGFVKAALAVATKGAALKLPLSFLEPCADRGGWLAETPPAVCVFLRRAKYTHAHHVKVGEFWGVWYIDGGSCDNSRGSRLVFCPE 1171
CTSPEA+DA AV I+GCVLDMCGGP DAVA R TCE+LTNDVSS DTNLDASL SF +DFL A SGKRP+WV TSPPY A+ FVKAA+++ATKG K+ + FLEPCAD GGWL PP++CVFLRRAKYT A++ K EFWGVWY SC N +RLVFCPE
Sbjct: 31 CTSPEAMDASLGAVDITGCVLDMCGGPTDAVATRLRSTCEILTNDVSSGRPADTNLDASLESFPEDFLAAYSGKRPEWVATSPPYSRALTFVKAAMSLATKGVTFKMHIFFLEPCADWGGWLQTNPPSLCVFLRRAKYTRANNAKTSEFWGVWYTQEMSCRNR--TRLVFCPE 201
BLAST of mRNA_P-littoralis_Contig185.32.1 vs. uniprot
Match: A0A6H5K929_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K929_9PHAE) HSP 1 Score: 229 bits (584), Expect = 4.210e-70 Identity = 111/151 (73.51%), Postives = 117/151 (77.48%), Query Frame = 2
Query: 719 MCGGPEDAVAQRFGGTCEVLTNDVSSRLSPDTNLDASLLSFRDDFLKANSGKRPDWVVTSPPYKGAVGFVKAALAVATKGAALKLPLSFLEPCADRGGWLAETPPAVCVFLRRAKYTHAHHVKVGEFWGVWYIDGGSCDNSRGSRLVFCPE 1171
MCGGPEDAVA FGGTCEVLTNDVSSRLSP A+ GK+PDWVVTSPPYKGAVGFVKA LAVA KG AL+LPLSF +PCADRG WL + PP +C FLRRAKYTHAHHVKVGEFWGVWY DGG C S GSRLVFCPE
Sbjct: 1 MCGGPEDAVALGFGGTCEVLTNDVSSRLSP-----------------AHPGKQPDWVVTSPPYKGAVGFVKAVLAVAAKGVALRLPLSFRKPCADRGSWLVDNPPVMCGFLRRAKYTHAHHVKVGEFWGVWYTDGG-CGKSGGSRLVFCPE 133
BLAST of mRNA_P-littoralis_Contig185.32.1 vs. uniprot
Match: A0A6H5K049_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K049_9PHAE) HSP 1 Score: 229 bits (583), Expect = 1.370e-68 Identity = 109/157 (69.43%), Postives = 124/157 (78.98%), Query Frame = 2
Query: 653 CTSPEAVDALRDAVAISGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSRLSPDTNLDASLLSFRDDFLKANSGKRPDWVVTSPPYKGAVGFVKAALAVATKGAALKLPLSFLEPCADRGGWLAETPPAVCVFLRRAKYTHAHHVKVGEFWGVWYIDG 1123
CTSP ++AL V+ISGCVLDMCGG +DAVA R TC+VLTNDV RLSP TNLDAS SF DDFL A+ G++PDW+VTSPPYKGA+ FVKAAL VA KG ALKLPLSFLEPCADR GWL PPA+C+ + RA+Y AH V+VGEFWGVWY G
Sbjct: 72 CTSPATLEALLGVVSISGCVLDMCGGTDDAVAIRLRDTCQVLTNDVGPRLSPATNLDASSASFTDDFLAAHHGQQPDWIVTSPPYKGALAFVKAALTVAKKGVALKLPLSFLEPCADRAGWLQANPPALCMMMSRARYQPAH-VRVGEFWGVWYPPG 227
BLAST of mRNA_P-littoralis_Contig185.32.1 vs. uniprot
Match: D8LSI1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSI1_ECTSI) HSP 1 Score: 216 bits (549), Expect = 1.160e-64 Identity = 103/151 (68.21%), Postives = 117/151 (77.48%), Query Frame = 2
Query: 719 MCGGPEDAVAQRFGGTCEVLTNDVSSRLSPDTNLDASLLSFRDDFLKANSGKRPDWVVTSPPYKGAVGFVKAALAVATKGAALKLPLSFLEPCADRGGWLAETPPAVCVFLRRAKYTHAHHVKVGEFWGVWYIDGGSCDNSRGSRLVFCPE 1171
MCGGP DAVA R TCE+LTNDVSS DTNL+ASL F +DFL A SGKRP+WVVTSPPY A+ FVKAA+++ATKG A K+P+ FLEPCADRGGWL PP+VCVFLRRAKYT A++ K GEFWGVWY SC N +RLVFCPE
Sbjct: 1 MCGGPTDAVATRLRSTCEILTNDVSSGRPADTNLNASLELFPEDFLAAYSGKRPEWVVTSPPYSRALTFVKAAMSLATKGVAFKMPIFFLEPCADRGGWLQTNPPSVCVFLRRAKYTRANNAKTGEFWGVWYPQEMSCRNR--TRLVFCPE 149
BLAST of mRNA_P-littoralis_Contig185.32.1 vs. uniprot
Match: A0A6H5KHQ4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHQ4_9PHAE) HSP 1 Score: 207 bits (528), Expect = 1.570e-59 Identity = 109/176 (61.93%), Postives = 124/176 (70.45%), Query Frame = 2
Query: 653 CTSPEAVDALRDAVAISGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSRLS------PDTNLDASLLSFRDDFLKANSGKRPDWVVTSPPYKGAVGFVKAALAVATKGAALKLPLSFLEPCADRGGWLAETPPAVCVFLRRAKYTHAHHVKVGEFWGVWYIDGGSCDNSRGSRLVF 1162
CTS AV+AL DAV +SG VLDMCGGP+DAVA++ TCEV+TNDVSSRLS PDT+LDAS +F +FL ++P+ VV SPPYKGAV FVKAAL VA G ALK LSFLEPC DR WL PP VCVFLRRA YT HV +GEFWGVWY GG G++LVF
Sbjct: 120 CTSIVAVEALLDAVNVSGRVLDMCGGPDDAVARKLRDTCEVVTNDVSSRLSSDARRAPDTSLDASKSTFAAEFLADGFQQQPERVVASPPYKGAVKFVKAALCVAKHGVALKRSLSFLEPCVDRADWLEANPPTVCVFLRRASYT-PEHVMMGEFWGVWYCTGGDRTAVGGTKLVF 294
BLAST of mRNA_P-littoralis_Contig185.32.1 vs. uniprot
Match: D7FJU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJU4_ECTSI) HSP 1 Score: 204 bits (519), Expect = 3.360e-59 Identity = 98/138 (71.01%), Postives = 112/138 (81.16%), Query Frame = 2
Query: 653 CTSPEAVDALRDAVAISGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSRLSP-----DTNLDASLLSFRDDFLKANSGKRPDWVVTSPPYKGAVGFVKAALAVATKGAALKLPLSFLEPCADRGGWLAETPPAVCVFL 1051
CTSPEAV+AL AV + GCVLDMCGGP DA+A R G TC+V+TND+S+RLSP DTNLDASL SF DFL A G+RPDWV+TSPPYKGA+ +VK+AL++A KG ALKLPLSFLEPCADRGGWL PPAVCVF
Sbjct: 84 CTSPEAVEALLGAVELEGCVLDMCGGPGDAIATRLGATCKVVTNDISTRLSPGGLPPDTNLDASLASFAVDFLLAKPGQRPDWVLTSPPYKGALEYVKSALSLAAKGVALKLPLSFLEPCADRGGWLQANPPAVCVFF 221
BLAST of mRNA_P-littoralis_Contig185.32.1 vs. uniprot
Match: A0A6H5L1N5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1N5_9PHAE) HSP 1 Score: 190 bits (482), Expect = 2.700e-54 Identity = 108/186 (58.06%), Postives = 115/186 (61.83%), Query Frame = 2
Query: 620 N*FRLL*TRLD--CTSPEAVDALRDAVAISGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSRLSPDTNLDASLLSFRDDFLKANSGKRPDWVVTSPPYKGAVGFVKAALAVATKGAALKLPLSFLEPCADRGGWLAETPPAVCVFLRRAKYTHAHHVKVGEFWGVWYIDGGSCDNSRGSRLVFCPE 1171
N R RLD CTSP AVDALR AVAI+GCVLDMCGGPEDAVAQ FGGTC TNLDASL+ F D+F+K N GK+PDWVVTSPPYKG+VGFV AALAVATKG ALKL L P P +VGEFWGVWY DG C NS SRLVFCPE
Sbjct: 36 NLSRTTRRRLDRYCTSPAAVDALRAAVAITGCVLDMCGGPEDAVAQGFGGTC--------------TNLDASLVYFPDEFIKDNPGKKPDWVVTSPPYKGSVGFVHAALAVATKGVALKLSLYSWNP----------VPTG----------------EVGEFWGVWYTDGSYCGNSGVSRLVFCPE 181
BLAST of mRNA_P-littoralis_Contig185.32.1 vs. uniprot
Match: A0A6H5KU02_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU02_9PHAE) HSP 1 Score: 178 bits (452), Expect = 6.740e-49 Identity = 84/125 (67.20%), Postives = 98/125 (78.40%), Query Frame = 2
Query: 797 RLSPDTNLDASLLSFRDDFLKANSGKRPDWVVTSPPYKGAVGFVKAALAVATKGAALKLPLSFLEPCADRGGWLAETPPAVCVFLRRAKYTHAHHVKVGEFWGVWYIDGGSCDNSRGSRLVFCPE 1171
R DTNLDASL SF +DFL A SGKRP+WVVTSPPY A+ FVKAA+++ATKG K+P+S LEPCADRGGWL PP+VC+FLRRAKYT A++ K+GEFWGVWY SC N +RLVFCPE
Sbjct: 134 RRPADTNLDASLESFPEDFLAAYSGKRPEWVVTSPPYSRALTFVKAAMSLATKGVEFKMPISCLEPCADRGGWLQTNPPSVCLFLRRAKYTRANNAKMGEFWGVWYTQEVSCRNK--TRLVFCPE 256
BLAST of mRNA_P-littoralis_Contig185.32.1 vs. uniprot
Match: A0A6H5KAM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAM1_9PHAE) HSP 1 Score: 172 bits (435), Expect = 4.500e-48 Identity = 80/128 (62.50%), Postives = 97/128 (75.78%), Query Frame = 2
Query: 788 VSSRLSPDTNLDASLLSFRDDFLKANSGKRPDWVVTSPPYKGAVGFVKAALAVATKGAALKLPLSFLEPCADRGGWLAETPPAVCVFLRRAKYTHAHHVKVGEFWGVWYIDGGSCDNSRGSRLVFCPE 1171
V +LSPDTNLDAS S+ DD+L A++G++PDWVV SPPYKGA+ FVKAAL VA +G ALKLPLSFLEPCADR GWL E PP++C+ + RA+Y AH V+VGEFWGVWY GG ++L F P
Sbjct: 6 VVCKLSPDTNLDASSTSYADDYLAAHNGQQPDWVVASPPYKGALSFVKAALTVAKEGVALKLPLSFLEPCADRAGWLQENPPSLCMMMSRARYQPAH-VRVGEFWGVWYPPGGGSSIGDSTKLSFLPS 132 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig185.32.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig185.32.1 >prot_P-littoralis_Contig185.32.1 ID=prot_P-littoralis_Contig185.32.1|Name=mRNA_P-littoralis_Contig185.32.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=152bp MCGGPEDAVAQRFGGTCEVLTNDVSSRLSPDTNLDASLLSFRDDFLKANSback to top mRNA from alignment at P-littoralis_Contig185:178541..180458- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig185.32.1 ID=mRNA_P-littoralis_Contig185.32.1|Name=mRNA_P-littoralis_Contig185.32.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1918bp|location=Sequence derived from alignment at P-littoralis_Contig185:178541..180458- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig185:178541..180458- >mRNA_P-littoralis_Contig185.32.1 ID=mRNA_P-littoralis_Contig185.32.1|Name=mRNA_P-littoralis_Contig185.32.1|organism=Pylaiella littoralis U1_48|type=CDS|length=456bp|location=Sequence derived from alignment at P-littoralis_Contig185:178541..180458- (Pylaiella littoralis U1_48)back to top |