mRNA_P-littoralis_Contig184.98.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig184.98.1 vs. uniprot
Match: A0A6H5JT76_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JT76_9PHAE) HSP 1 Score: 491 bits (1265), Expect = 2.130e-157 Identity = 286/523 (54.68%), Postives = 350/523 (66.92%), Query Frame = 3
Query: 564 LSSAKGTIDRKKQDEVEELKKSLKHLASLRMWRQATVAFDKAKADGLPLTSSTYSTMINVMSKAGRWKEALELLEEMIAGGPTGGLSGPKIAPSVVSYNAAITACARGNKMPKALAVLGQMHPRSGIKPDLYSYGSVLSGLAKARNPSRAIRLLDEMRAGGVEPDLVCLMSAMGACETKGASKESATVLEMIRELDPPPGSRTMTSILTSAISACVIEGAWEQATDWLTDIRMVNGGGVPPAAAYAAAANACARAGQAVRAQALIAELVGAGGGNGEAEPPTLDCFNAVVLGCAMSGDVEEALRTLREDIPRAGLKPDSQTLTHLLRAYARLKDWEAAVALLDEQRSGVFPNAPPNRHGFNAAIDACGRAGQVRPAIDLLDAMRAASRQNARLKPDHYSYGGALQACRSTGAGAGAAASALDLLRGMEKDRVKLDQRCALAAFSTVSAAAGMEDEATQILEALLESKTSTSEGALAGAKEELVEKIEAGGGGGSKFARALAVLEELETARAGIAASKAVRAAA 2132
LSS GTI+RK+Q +V EL+K L+ ASLRMWR+AT AFDKAKAD LP+T++TY+ INVMSK GRWKEA+ELLEEMIA G GPK+ PSVVSYNAAITAC+R NK+P AL +L +M RSG+ P MRA G+EPDLVCL AM AC +KGA KE+ VLE +RELDP P + TM +LTSAI+ACV EGAWEQATDWLTDIRM GG +PP AYAAAANACARAGQ VRA+ALIAEL GG EA+ PTL+C++AVVLG A++GD +EALR L+ D+P+AGL+P++Q H+L+ +A++ DW+ AV +LDEQRSG FP+APP+R +N AI+ACGR LDAMRAAS +N RL+P M+KD +K DQ C+LAAFS V AA G D+A +ILE L STSEGA+A AKE LVE + + GG +FAR +A E LE A+A AA KA +AA
Sbjct: 131 LSSVDGTIERKQQLKVAELEKQLQRFASLRMWRRATEAFDKAKADRLPITAATYTHAINVMSKGGRWKEAIELLEEMIAAGNDSN-GGPKVTPSVVSYNAAITACSRANKVPAALRLLDEMSSRSGLSPXXXXXXXXXXXXXXXXXXXXXXXXXXXMRAAGMEPDLVCLKGAMEACRSKGAPKEAGVVLEQVRELDPRPSASTMADVLTSAIAACVTEGAWEQATDWLTDIRMARGGRLPPPEAYAAAANACARAGQGVRARALIAELDN--GGKDEAQRPTLECYDAVVLGSALAGDPKEALRILKVDVPKAGLQPNTQGFNHVLQGFAKVGDWKTAVTVLDEQRSGAFPDAPPDRWSYNNAIEACGRXXXXXXXXXXLDAMRAASHRNRRLRPCXXXXXXXXXXXXXXXXXX----XXXXXXXXMKKDGIKGDQLCSLAAFSAV-AAVGRADKAAEILEDLARGGVSTSEGAVASAKEGLVEVLGSDIEGGGRFARVMAAFEVLEAAQAEKAAKKAELSAA 645
BLAST of mRNA_P-littoralis_Contig184.98.1 vs. uniprot
Match: A0A7S2RIC2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RIC2_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 3.760e-13 Identity = 94/361 (26.04%), Postives = 142/361 (39.34%), Query Frame = 3
Query: 837 APSVVSYNAAITACARGNKMPKALAVLGQMHPRSGIKPDLYSYGSVLSGLAKARNPSR-------------------------------AIRLLDEMRAGGVEPDLVCLMSAMGACETKGASKESAT---------------------VLEMIRELDPP---PGSRTMTSILTSAISACVIEGAWEQATDWLTDIRMVNGGGVPPAAAYAAAANACARAGQAVRAQALIAELVGAGGGNGEAEPPTLDCFNAVVLGCAMSGDVEEALRTLREDIPRAGLKPDSQTLTHLLRAYAR--------------LKDWEAAVALLDEQRSGVFPNAPPNRHGFNAAIDACGRAGQVRPAIDLLDAM 1712
+P+VV+YN+ I ACA+ + +AL +L R G+KPD ++Y + +S A+A+ P A RL G + SA K +E LE++ E+ P RT +AI+AC G W +A L R + G A Y +A AC R GQ + A AL+ + E + +D + + L AM+ + L D P PD ++ T ++ A+ + ++ W A+ +LD R G P A PN ++AAI AC R GQ RPA++LLD M
Sbjct: 22 SPTVVTYNSVIAACAKAGRWLEALQLLYAAKTR-GVKPDKFTYAAAISACARAKPPKAEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGRLRRPNTGRGQQRRGAEGGSAASPATRKAGGREGTASLDNVIADMWRSTKARTGPERALELLEEMQADGIKPNGRTF----GTAITACASRGLWRRALGLLVTAREM--GYDLGLAVYNSALYACERGGQPLHALALLQFM--------ENDQAWVDAWESESLVAAMASTARQELWAQLGDRPTPA--PDVRSYTAVISAFGKAMRNERPKEGSGYAVEWWRVALEVLDRSRQGA-PAARPNLFAYSAAISACARGGQWRPAMNLLDEM 364
BLAST of mRNA_P-littoralis_Contig184.98.1 vs. uniprot
Match: A0A813GM44_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813GM44_POLGL) HSP 1 Score: 70.9 bits (172), Expect = 8.400e-9 Identity = 56/165 (33.94%), Postives = 78/165 (47.27%), Query Frame = 3
Query: 756 GRWKEALELLEEMIAGGPTGGLSGPKIAPSVVSYNAAITACARGNKMPK--ALAVLGQMHPRSGIKPDLYSYGSVLSGLAKARNPSR--------AIRLLDEMRAGGVEPDLVCLMSAMGACETKGASKESATVLEMIRELDPPPGSRTMTSILTSAISACVIEG 1220
G W AL LL E G + P VVS+ A ++ACARG + P+ ALA+LG+ R G+K DL +Y S L+ L+ N A++LL E+R G PD V + + +GA G + A L ++ E+ P LT AI EG
Sbjct: 344 GEWAWALCLLREAQRG---------SLPPDVVSFAAVVSACARGVRCPRPLALALLGEAKHR-GLKLDLVAYNSALAALSGGTNNKNSNNNSWRLALQLLQELRLEGHLPDAVGINAVLGAVAGSGGGSQWAEALVLLGEM---PAFHLQPDALTFAICVTAFEG 495
BLAST of mRNA_P-littoralis_Contig184.98.1 vs. uniprot
Match: A0A438IH69_VITVI (Pentatricopeptide repeat-containing protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438IH69_VITVI) HSP 1 Score: 65.9 bits (159), Expect = 7.610e-8 Identity = 41/145 (28.28%), Postives = 72/145 (49.66%), Query Frame = 3
Query: 720 TYSTMINVMSKAGRWKEALELLEEMIAGGPTGGLSGPKIAPSVVSYNAAITACARGNKMPKALAVLGQMHPRSGIKPDLYSYGSVLSGLAKARNPSRAIRLLDEMRAGGVEPDLVCLMSAMGACETKGASKESATVLEMIRELDP 1154
T++ MI +++ GR KEALELL+EM+A G + P+ V++ + +AC + + L + M + G+ P + YG ++ L +A + A D +R VEPD + S + AC+ V +++ +L P
Sbjct: 85 TWTAMITGLARHGRGKEALELLDEMVAYG---------VKPNAVTFTSLFSACCHAGLVEEGLQLFHSMRSKFGVTPGIQHYGCIVDLLGRAGHLKEAY---DFVRGMPVEPDAILWRSLLSACKVHRDVVMGEEVGKLLLQLQP 217
BLAST of mRNA_P-littoralis_Contig184.98.1 vs. uniprot
Match: A0A438DRJ5_VITVI (Pentatricopeptide repeat-containing protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438DRJ5_VITVI) HSP 1 Score: 65.9 bits (159), Expect = 2.440e-7 Identity = 41/145 (28.28%), Postives = 72/145 (49.66%), Query Frame = 3
Query: 720 TYSTMINVMSKAGRWKEALELLEEMIAGGPTGGLSGPKIAPSVVSYNAAITACARGNKMPKALAVLGQMHPRSGIKPDLYSYGSVLSGLAKARNPSRAIRLLDEMRAGGVEPDLVCLMSAMGACETKGASKESATVLEMIRELDP 1154
T++ MI +++ GR KEALELL+EM+A G + P+ V++ + +AC + + L + M + G+ P + YG ++ L +A + A D +R VEPD + S + AC+ V +++ +L P
Sbjct: 246 TWTAMITGLARHGRGKEALELLDEMVAYG---------VKPNAVTFTSLFSACCHAGLVEEGLQLFHSMRSKFGVTPGIQHYGCIVDLLGRAGHLKEAY---DFVRGMPVEPDAILWRSLLSACKVHRDVVMGEEVGKLLLQLQP 378
BLAST of mRNA_P-littoralis_Contig184.98.1 vs. uniprot
Match: D7TUI5_VITVI (Uncharacterized protein n=3 Tax=Vitis TaxID=3603 RepID=D7TUI5_VITVI) HSP 1 Score: 65.9 bits (159), Expect = 2.760e-7 Identity = 41/145 (28.28%), Postives = 72/145 (49.66%), Query Frame = 3
Query: 720 TYSTMINVMSKAGRWKEALELLEEMIAGGPTGGLSGPKIAPSVVSYNAAITACARGNKMPKALAVLGQMHPRSGIKPDLYSYGSVLSGLAKARNPSRAIRLLDEMRAGGVEPDLVCLMSAMGACETKGASKESATVLEMIRELDP 1154
T++ MI +++ GR KEALELL+EM+A G + P+ V++ + +AC + + L + M + G+ P + YG ++ L +A + A D +R VEPD + S + AC+ V +++ +L P
Sbjct: 284 TWTAMITGLARHGRGKEALELLDEMVAYG---------VKPNAVTFTSLFSACCHAGLVEEGLQLFHSMRSKFGVTPGIQHYGCIVDLLGRAGHLKEAY---DFVRGMPVEPDAILWRSLLSACKVHRDVVMGEEVGKLLLQLQP 416
BLAST of mRNA_P-littoralis_Contig184.98.1 vs. uniprot
Match: A0A7S4QZZ5_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4QZZ5_9DINO) HSP 1 Score: 66.2 bits (160), Expect = 3.170e-7 Identity = 50/180 (27.78%), Postives = 82/180 (45.56%), Query Frame = 3
Query: 648 LRMWRQATVAFDKAKADGLPLT----------SSTYSTMINVMSKAGRWKEALELLEEMIAGGPTGGLSGPKIAPSVVSYNAAITACARGNKMPKALAVLGQMHP-----RSGIKPDLYSYGSVLSGLAKARNPSRAIRLLDEMRAGGVEPDLVCLMSAMGACETKGASKESATVLEMIR 1142
L+ W + + GLP T +S + ++ +S+ W+EA+ L + G + + +YNAAITAC RG + +A+A+ + R G+ PDL++Y + + R R + LL EMRA VEPD V L S + AC A +++ ++R
Sbjct: 209 LQRWSDSIHTLQALRRRGLPSTLRRVLRSRSAASHGTAAVSALSRRQLWQEAVALFSALRTG---------RADLDIFAYNAAITACHRGQQAAEAMALGEEAEELAGQGRRGLAPDLFTYNASIGACDDWR---RVLALLGEMRARTVEPDAVTLNSTVSACSRGRAWEQALGAFRVLR 376
BLAST of mRNA_P-littoralis_Contig184.98.1 vs. uniprot
Match: A0A7S1TCT4_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TCT4_9RHOD) HSP 1 Score: 65.9 bits (159), Expect = 4.160e-7 Identity = 57/223 (25.56%), Postives = 106/223 (47.53%), Query Frame = 3
Query: 723 YSTMINVMSKAGRWKEALELLEEMIAGGPTGGLSGPKIAPSVVSYNAAITACARGNKMPKALAVLGQMHPRSGIKPDLYSYGSVLSGLAKARNPSR----AIRLLDEMRAGGVEPDLVCLMSAMGACETKGASKESATVLEMIRELDPPPGSRTMTSILTSAISACVIEGAWEQATDWLTDIRMVNGGGVPPAAAYAAAANACARAGQAVRAQALIAELVGAG 1379
++T+I ++ A +L+EM A G + P+ +YNA I AC ++ +A + G+M G++P++ S+ +L+ A S+ + L++M A GV+P+L+ + +C G K++ V+ ++E P T++L I W A + ++R + A +++ ACARAGQ RA+AL+ ++ AG
Sbjct: 312 WTTLIKSHARMNDLDAAFSVLKEMRACG---------LNPNDHTYNALIAACVSCRRLRRARLLFGEML-YDGVEPNVISWNIILNWHATIGRGSKRYEATLAALEDMVASGVQPNLISFTTLAKSCLVGGNMKQAENVISRMKEHGITPD----TALLNQMIKGYGSVLRWRPALEIFDELRKTS---KADATSHSLVIEACARAGQIERAEALLVAMIEAG 517
BLAST of mRNA_P-littoralis_Contig184.98.1 vs. uniprot
Match: B7GE16_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GE16_PHATC) HSP 1 Score: 63.2 bits (152), Expect = 1.670e-6 Identity = 83/308 (26.95%), Postives = 127/308 (41.23%), Query Frame = 3
Query: 819 LSGPKIAPSVVSYNAAITACARGNKMPKALAVLGQMHPRSGIKPDLYSYGSVLSGLAKARNP--SRAIRLLDEM-RAGGVEPDLVCLMSAMGACETKGASKESATVLEMIRELD--PPPGSRTMTSILTSAISACVIEGAWEQATDWLTDIRMVNGGGVPPAAAYAAAANACARAGQAVRAQAL-IAELVG-------------AGGGNGEAEPPTLDCFNAVVLGCAMSGDVEEALRTLREDIP----RAGLKPDSQTLTHLLRAYARLKDWEAAVALLDEQRSGVFPNAPPNRHGFNAAIDACGRA 1673
L+GP P+V ++ A ++ AR K +A+A L M + G+ P+ Y + +S +KA P A+ LL+ R G+ +V +A+ A G + + +L+ + P P + T ++L SAC W + + RM G A + +AC G A AQAL + EL G P + V+ CA G ++ALR LRE I RA + D T + A A +W+ A LL++ R PN F A + AC A
Sbjct: 124 LAGP--VPNVYTFGALMSVLARAGKAEQAVAWLDTMQDKYGVTPNQVVYHAAISACSKADPPRVDMAMDLLERATRTEGLTLTVVGYNAAVSAAARAGDADVAIRLLQRMETEPALPKPDAVTYGTVL----SACAKTFRWNELLHYAA--RMQERGFGLDTLAATSMLHACQELGLA--AQALHVLELCKLDVTYQRRTAGWLVAGRKQPLHGPDAVVYRLVITACARGGAWQDALRVLREYIEVQPERATSEDDVAVYTAAMGALAHAGEWKQAFFLLEQMRKRAIV---PNESTFVALLAACATA 418
BLAST of mRNA_P-littoralis_Contig184.98.1 vs. uniprot
Match: A0A813HU93_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HU93_POLGL) HSP 1 Score: 60.8 bits (146), Expect = 4.230e-6 Identity = 53/175 (30.29%), Postives = 76/175 (43.43%), Query Frame = 3
Query: 720 TYSTMINVMSKAGRWKEALELLEEMIAGGPTGGLSGPKIAPSVVSYNAAITACARGNKMPKALAVLGQMHPRSGIKPDLYSYGSVLSGLAKARNPSRAIRLLDEMRAGGVEPD---LVCLMSAMGACETKGASKESATVLEMIRELDPPPGSRTMTSILTSAISACVIEGAWEQA 1235
TY G W+ A+ L T APS+VS NAA++AC R LA+ M + G +PD S G+ +S L + RA++LL+E R G+ P L C+ +A+ TK + ++ +R P S S+ T CV G WEQA
Sbjct: 125 TYEVTCLAAQAGGLWQAAVTALGSAWTSAQTA-------APSLVSANAALSACERCTAWEAVLAIAKDMK-QMGPEPDALSLGACVSALGASGRWGRALQLLEEGRYAGLTPGSFGLSCMTNALEGLWTK-----ALCLVRDMRASQLEPNSIAFNSLST----VCVKAGRWEQA 282 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig184.98.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig184.98.1 >prot_P-littoralis_Contig184.98.1 ID=prot_P-littoralis_Contig184.98.1|Name=mRNA_P-littoralis_Contig184.98.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=676bp MKNHAAAAAGTAVMMALISTTECFMSTTTTPTRSASRGSSSHPATTSADAback to top mRNA from alignment at P-littoralis_Contig184:356595..366354+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig184.98.1 ID=mRNA_P-littoralis_Contig184.98.1|Name=mRNA_P-littoralis_Contig184.98.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=9760bp|location=Sequence derived from alignment at P-littoralis_Contig184:356595..366354+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig184:356595..366354+ >mRNA_P-littoralis_Contig184.98.1 ID=mRNA_P-littoralis_Contig184.98.1|Name=mRNA_P-littoralis_Contig184.98.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2028bp|location=Sequence derived from alignment at P-littoralis_Contig184:356595..366354+ (Pylaiella littoralis U1_48)back to top |