mRNA_P-littoralis_Contig184.9.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig184.9.1
Unique NamemRNA_P-littoralis_Contig184.9.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig184.9.1 vs. uniprot
Match: A0A6H5JIE9_9PHAE (Sulfatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIE9_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 2.150e-27
Identity = 48/67 (71.64%), Postives = 57/67 (85.07%), Query Frame = 1 
Query:    7 IPSHRGFDSFMGYLNGEEMYWTHQSLEAELLGRKFFDFGFGNSTGYYDIIDRPLPDHVQTGSLSSDD 207
            IPS RGFD+++GYLN EEMYWTHQS  A+  GRKFFDFGFGN+TGYYDIIDR LPDH++ G++S  D
Sbjct:  265 IPSQRGFDTYLGYLNDEEMYWTHQSWTAKYNGRKFFDFGFGNATGYYDIIDRELPDHLRDGTVSDGD 331
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BLAST of mRNA_P-littoralis_Contig184.9.1 vs. uniprot
Match: D7G1A6_ECTSI (Formylglycine-dependent sulfatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1A6_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 2.050e-19
Identity = 42/69 (60.87%), Postives = 51/69 (73.91%), Query Frame = 1 
Query:   10 PSHRGFDSFMGYLNGEEMYWTHQSLEAELLGRKFFDFGFGNSTGYYDIIDR--PLP---DHVQTGSLSS 201
            P  RGF+++ GYLN EEMYWTHQ+  A + GRKFFDFGFGN+TG+YD+I+R  P P   D V TG  SS
Sbjct:  226 PHRRGFETYFGYLNDEEMYWTHQTWTATINGRKFFDFGFGNATGFYDVIERFDPPPGDDDLVSTGPTSS 294
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BLAST of mRNA_P-littoralis_Contig184.9.1 vs. uniprot
Match: A0A6H5L6W1_9PHAE (Sulfatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6W1_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 4.940e-16
Identity = 33/53 (62.26%), Postives = 41/53 (77.36%), Query Frame = 1 
Query:    7 IPSHRGFDSFMGYLNGEEMYWTHQSLEAELLGRKFFDFGFGNSTGYYDIIDRP 165
            +PS RGFD++MGYL G E YWTH+++     GR   DFGFGN++GYYDIIDRP
Sbjct:  174 VPSQRGFDTYMGYLGGFEAYWTHETIGVISDGRHVCDFGFGNASGYYDIIDRP 226
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BLAST of mRNA_P-littoralis_Contig184.9.1 vs. uniprot
Match: A0A6H5K4V1_9PHAE (Sulfatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4V1_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 7.290e-14
Identity = 29/50 (58.00%), Postives = 42/50 (84.00%), Query Frame = 1 
Query:    4 AIPSHRGFDSFMGYLNGEEMYWTHQSLEAELLGRKFFDFGFGNSTGYYDI 153
            ++PS RGF +F+GYLNG + Y++H++ EA + GR FFDFG+GN+TGYYD+
Sbjct:  299 SLPSKRGFKTFLGYLNGIDTYYSHKNPEASVDGRHFFDFGYGNATGYYDV 348
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BLAST of mRNA_P-littoralis_Contig184.9.1 vs. uniprot
Match: D7FLR4_ECTSI (Formylglycine-dependent sulfatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLR4_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 4.740e-13
Identity = 28/50 (56.00%), Postives = 42/50 (84.00%), Query Frame = 1 
Query:    4 AIPSHRGFDSFMGYLNGEEMYWTHQSLEAELLGRKFFDFGFGNSTGYYDI 153
            ++PS RGF +F+GYLNG E Y++H++ EA + G+ FFDFG+GN+TGY+D+
Sbjct:  329 SLPSQRGFKTFLGYLNGIETYYSHKNPEASVDGQYFFDFGYGNATGYHDV 378
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BLAST of mRNA_P-littoralis_Contig184.9.1 vs. uniprot
Match: D8LRL9_ECTSI (Formylglycine-dependent sulfatase, C-terminal Formylglycine-dependent sulfatase, N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRL9_ECTSI)

HSP 1 Score: 62.8 bits (151), Expect = 8.460e-10
Identity = 29/68 (42.65%), Postives = 39/68 (57.35%), Query Frame = 1 
Query:    7 IPSHRGFDSFMGYLNGEEMYWTHQSLEAELLGRK------------FFDFGFGNSTGYYDIIDR-PLP 171
            +P  RGF++++GY  G E YWTH++       R+            FFDFGFGN TGYYD++ R P P
Sbjct:  108 MPHLRGFETYLGYTQGRETYWTHEANWHYPFSRRDYPYQQPNQDGVFFDFGFGNETGYYDVMQRSPAP 175
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BLAST of mRNA_P-littoralis_Contig184.9.1 vs. uniprot
Match: A0A6H5JFF9_9PHAE (Sulfatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFF9_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 1.590e-9
Identity = 26/67 (38.81%), Postives = 38/67 (56.72%), Query Frame = 1 
Query:    7 IPSHRGFDSFMGYLNGEEMYWTHQSLEAELLGRK------------FFDFGFGNSTGYYDIIDRPLP 171
            +P  RGF++++GY  G E YWTH++       ++            FFDFGFGN TGYYD++ +  P
Sbjct:  210 MPHRRGFETYLGYTQGRETYWTHEANWHYPFSQRDYPHQQPHQDGIFFDFGFGNETGYYDVMQKSPP 276
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BLAST of mRNA_P-littoralis_Contig184.9.1 vs. uniprot
Match: A0A2T7NLT9_POMCA (Sulfatase domain-containing protein n=2 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NLT9_POMCA)

HSP 1 Score: 50.4 bits (119), Expect = 1.860e-5
Identity = 27/67 (40.30%), Postives = 37/67 (55.22%), Query Frame = 1 
Query:    7 IPSHRGFDSFMGYLNGEEMYWTHQSLEAE--LLGRKFFDFGFGNSTGYYDIIDRPLPDHVQTGSLSS 201
            +P+HRGFD+F GYL G E Y+TH   + E  +L     D  F      YD+ D  +P   QTG+ S+
Sbjct:  102 LPTHRGFDTFYGYLTGSEDYYTHFRCDGEHDVLKNASSDLEFCG----YDLRDNEVPVKDQTGNYST 164
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig184.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5JIE9_9PHAE2.150e-2771.64Sulfatase domain-containing protein n=2 Tax=Ectoca... [more]
D7G1A6_ECTSI2.050e-1960.87Formylglycine-dependent sulfatase n=1 Tax=Ectocarp... [more]
A0A6H5L6W1_9PHAE4.940e-1662.26Sulfatase domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5K4V1_9PHAE7.290e-1458.00Sulfatase domain-containing protein n=1 Tax=Ectoca... [more]
D7FLR4_ECTSI4.740e-1356.00Formylglycine-dependent sulfatase n=1 Tax=Ectocarp... [more]
D8LRL9_ECTSI8.460e-1042.65Formylglycine-dependent sulfatase, C-terminal Form... [more]
A0A6H5JFF9_9PHAE1.590e-938.81Sulfatase domain-containing protein n=1 Tax=Ectoca... [more]
A0A2T7NLT9_POMCA1.860e-540.30Sulfatase domain-containing protein n=2 Tax=Pomace... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig184contigP-littoralis_Contig184:33077..33820 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FLS5
PFAMsSulfatase
Model size216
Max annot lvl2759|Eukaryota
KEGG koko:K01280
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.08e-26
EggNOG OGsCOG3119@1|root,KOG3867@2759|Eukaryota
EC3.4.14.10
Descriptionsulfuric ester hydrolase activity
Cds size216
COG categoryP
BRITEko00000,ko01000,ko01002,ko03110
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789884.374861-CDS-P-littoralis_Contig184:33076..332141680789884.374861-CDS-P-littoralis_Contig184:33076..33214Pylaiella littoralis U1_48CDSP-littoralis_Contig184 33077..33214 -
1680789884.3851924-CDS-P-littoralis_Contig184:33742..338201680789884.3851924-CDS-P-littoralis_Contig184:33742..33820Pylaiella littoralis U1_48CDSP-littoralis_Contig184 33743..33820 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig184.9.1prot_P-littoralis_Contig184.9.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig184 33077..33820 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig184.9.1

>prot_P-littoralis_Contig184.9.1 ID=prot_P-littoralis_Contig184.9.1|Name=mRNA_P-littoralis_Contig184.9.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=72bp
PAIPSHRGFDSFMGYLNGEEMYWTHQSLEAELLGRKFFDFGFGNSTGYYD
IIDRPLPDHVQTGSLSSDDGM*
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mRNA from alignment at P-littoralis_Contig184:33077..33820-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig184.9.1 ID=mRNA_P-littoralis_Contig184.9.1|Name=mRNA_P-littoralis_Contig184.9.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=744bp|location=Sequence derived from alignment at P-littoralis_Contig184:33077..33820- (Pylaiella littoralis U1_48)
CCCGCTATCCCCAGCCACAGGGGCTTCGACAGTTTCATGGGCTACCTCAA
CGGCGAGGAGATGTATTGGACGCACCAGGTGTGTGCAGGTTTGGCGTGCA
CGGCTAGCGTAACGAGGCCGGCGGAAGGTGTGTTGTTATCCTGCAGTCGC
CGCAGCGGCCAAAAACGTATGAGCAGGAAGGAGCAGCGTTGGACGAGGTC
GTATATGCGTCTCGTCCGCCGATTGGAAATCGTGCAGACGACTTGAAAAG
CTTCCGTTCCCTTCGAACGACGCATGTGTGCTCTTGATTTGTCGGCCACC
AACCGGCGTAAATATTGCGATGCGACCGGTCGTGGTGACACGTGTTGTTA
TTGCTGCTGATGGTCGAGTTGTCATTGCTCTGTCATAGCGCTTGCCCTTG
TCGTGTAAGTCATTGCCGAAATGAAGGCGACGAGAGCAGGGCCATTCTCG
AATGAGCGCCATGCTCCTGTTGAACGTTATGCCGTTGCCCTTGGAGTTTT
GACGGCGTTCCTTCTCACCTGCGGCTTCGGAGAAATGTCTATCGCTAGCC
GGCGCTTTAACCGTTTTTTTCGCGATTTTTGATAAATTCCTATGCGTTAC
CACCAGAGTTTGGAAGCCGAACTGCTCGGGCGAAAGTTCTTCGACTTTGG
GTTCGGCAATTCTACTGGGTATTACGATATCATCGACAGGCCTCTCCCCG
ACCACGTGCAAACCGGCTCTCTCTCCAGTGATGACGGTATGTGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig184:33077..33820-

>mRNA_P-littoralis_Contig184.9.1 ID=mRNA_P-littoralis_Contig184.9.1|Name=mRNA_P-littoralis_Contig184.9.1|organism=Pylaiella littoralis U1_48|type=CDS|length=216bp|location=Sequence derived from alignment at P-littoralis_Contig184:33077..33820- (Pylaiella littoralis U1_48)
CCCGCTATCCCCAGCCACAGGGGCTTCGACAGTTTCATGGGCTACCTCAA
CGGCGAGGAGATGTATTGGACGCACCAGAGTTTGGAAGCCGAACTGCTCG
GGCGAAAGTTCTTCGACTTTGGGTTCGGCAATTCTACTGGGTATTACGAT
ATCATCGACAGGCCTCTCCCCGACCACGTGCAAACCGGCTCTCTCTCCAG
TGATGACGGTATGTGA
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