prot_P-littoralis_Contig183.90.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig183.90.2
Unique Name	prot_P-littoralis_Contig183.90.2
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	591

Homology

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BLAST of mRNA_P-littoralis_Contig183.90.2 vs. uniprot
Match: A0A6H5JEY2_9PHAE (HTH CENPB-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEY2_9PHAE)

HSP 1 Score: 854 bits (2206), Expect = 3.580e-308
Identity = 430/551 (78.04%), Postives = 485/551 (88.02%), Query Frame = 0

Query:   42 MKPERIASLEKSRDMELNLDAKRTPTPVNADLEARLNQWIKIARQRFE---LGLSGLMIQTQATRFASDMNVTDFTASNGWLHRFLGRYGFAHINLHGEAGDVDRGKAEREIAKIREQLEEFDVELIFNMDETGLFYRCFPRGTYVTRAEGAAGVNKKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVFRHVRKPPCPYYAQQSAWLDSSICQRWFDEVFVPFVKKNTGKKVVLLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKSQYKTEMVIRLAALIEDWDTVRARKIRRGCRGLSDAGQATMLDVTEILSQKWESFSDQTIVRCWLKATILPREHEDALKGRDTRLDREDK-DAAALDDLCDMVKKMSMPESAKGLDARSMPRLLSDNLFVESASGLTEQEVRSAVETWLSVEDDEEVLREEVELEMEEVTENISRVAVENDASSEEEDQDGRQESCMKSTISEAEVRSRLEDVRSYLYANGNDGEYSETVYLLSKTVHSFTHETQVKRRAKEGGEVQATLRDMW 588
            MKP+++A L KSRD ELNLDA RTPTPV+ DLE RL QWIK+AR RFE   +GLSG+MIQTQAT+FAS+M   DFTAS GWLHRFL RYGF HINLHGEAGDVD+ K E +IAKIREQLE FDVELIFNMDETGLF+RCFPRGTYVTRAE AAGVN+KTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVI TAK+PMVFRH+R+ P PYY+QQSAWLDS++CQRWFDEVFVPFVKK TGKKVVLLWDNCPGHKIKNDDPQI+IIFLPPNVTSVFQPMDMG+LFALK QYKTEMV RLA LI+ WD VRARKIRRGCRGL+DAGQATMLDVTEILS+KWESFS QT++RCWLKA ILPREHE+ALKG+DTRLDREDK D A +DDLC+MV KMSMP SA   D+RS  R+L+DNLFVE ASGLT+ EVR AV+TWLSVEDD EVL EE+ +E++ V E ++ V +++D  SEEED DGR ESC+ ++++EA+VR RLE+ RS+L A G DGEYSET+YLLS+TVHSFTHETQV RRAK+GGEVQATL DMW
Sbjct:    1 MKPDKLAELHKSRDSELNLDALRTPTPVHDDLEKRLLQWIKVARARFETTKIGLSGIMIQTQATKFASEMGKKDFTASKGWLHRFLKRYGFKHINLHGEAGDVDKTKYEEQIAKIREQLEGFDVELIFNMDETGLFFRCFPRGTYVTRAEDAAGVNRKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVISTAKNPMVFRHIRRSPIPYYSQQSAWLDSTLCQRWFDEVFVPFVKKTTGKKVVLLWDNCPGHKIKNDDPQIIIIFLPPNVTSVFQPMDMGILFALKCQYKTEMVARLADLIDVWDAVRARKIRRGCRGLNDAGQATMLDVTEILSEKWESFSSQTVIRCWLKANILPREHENALKGKDTRLDREDKEDTAIIDDLCEMVSKMSMPASAT--DSRSTARVLTDNLFVEKASGLTDAEVRQAVKTWLSVEDDPEVLEEEIAMELQAVDEQLAGVTLDDDVPSEEEDDDGRSESCVTTSLTEADVRFRLEECRSFLNAKGKDGEYSETLYLLSRTVHSFTHETQVNRRAKQGGEVQATLGDMW 549

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BLAST of mRNA_P-littoralis_Contig183.90.2 vs. uniprot
Match: A0A6H5JNS8_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS8_9PHAE)

HSP 1 Score: 814 bits (2102), Expect = 1.070e-291
Identity = 421/586 (71.84%), Postives = 478/586 (81.57%), Query Frame = 0

Query:   10 QRLEIVRAVQGGQQRSKVAQDFGVGKAYITKLMKPERIASLEKSRDMELNLDAKRTPTPVNADLEARLNQWIKIARQRFE---LGLSGLMIQTQATRFASDMNVTDFTASNGWLHRFLGRYGFAHINLHGEAGDVDRGKAEREIAKIREQLEEFDVELIFNMDETGLFYRCFPRGTYVTRAEGAAGVNKKTARGSKAMKAKDRCTVVACCNTTGSLKVP---LAVIHTAKDPMVFRHVRKPPCPYYAQQSAWLDSSICQRWFDEVFVPFVKKNTGKKVVLLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKSQYKTEMVIRLAALIEDWDTVRARKIRRGCRGLSDAGQATMLDVTEILSQKWESFSDQTIVRCWLKATILPREHEDALKGRDTRLDREDKD-AAALDDLCDMVKKMSMPESAKGLDARSMPRLLSDNLFVESASGLTEQEVRSAVETWLSVEDDEEVLREEVELEMEEVTENISRVAVENDASSEEEDQDGRQESCMKSTISEAEVRSRLEDVRSYLYANGNDGEYSETVYLLSKTVHSFTHETQVKRRAKEGGEVQATLRDMW 588
            QRL IV+ VQGG +RS VA  + VG +YI+KLM PE+IA LEK RDMELN DA R P PV+ ++E +L +WIKIAR RF+   +G+SG MIQ QA + A+ M  T+F A+NGWL+RFL RY F H+ LHGEAGDVD+ K   EI +IREQL+EFDV+ IFNMDE GLF+RCFPRGTYVTR E AAGVN KTARGSKAMKAKDRCTVVACCNTTGSL VP   LAVI T+K PMVFRHVRKPPCPY+AQ SAWLD++ICQRWFDEVFVPFVK  T KKV LLWDNCPGHKIK++DPQIVIIFLPPNV SV+QPM+MG+LF LK QYKTEMV RLA LIEDWDTVRARKI+RGCRGLSDAGQATMLDVTEI SQKW SF  QT++RCWLKA ILPREH   LKG DTRLDREDKD AA +D LCDM  KMSMP S    D RSMPR+L+DNLFVE  + LTEQEVR+AV+TWL+VEDD EVL+EEVELE++ V  +++ +  ++D SSEE D DGR ESC+ S+++E EV SRLEDVRSYLYA G  GEY ET YLLSKTVHSFT ETQ  RRAK  GEVQ TLRDMW
Sbjct:    3 QRLHIVKEVQGGAKRSMVAAKWNVGTSYISKLMNPEKIAELEKVRDMELNQDALRAPKPVHDEVEEKLRKWIKIARARFDATKMGVSGSMIQAQALKIAAQMGKTNFKATNGWLYRFLKRYSFTHVQLHGEAGDVDKQKVAEEIERIREQLQEFDVDFIFNMDEMGLFFRCFPRGTYVTRGEAAAGVNSKTARGSKAMKAKDRCTVVACCNTTGSLMVPFXPLAVISTSKKPMVFRHVRKPPCPYFAQSSAWLDAAICQRWFDEVFVPFVKGKTSKKVALLWDNCPGHKIKSNDPQIVIIFLPPNVNSVYQPMNMGILFVLKCQYKTEMVARLADLIEDWDTVRARKIQRGCRGLSDAGQATMLDVTEICSQKWRSFDVQTVIRCWLKAGILPREHCKVLKGMDTRLDREDKDDAAIIDGLCDMATKMSMPASVT--DCRSMPRVLTDNLFVEKGTDLTEQEVRTAVKTWLTVEDDPEVLKEEVELELQAVDRDLAGLETDDDVSSEEGDGDGRPESCITSSLTEGEVISRLEDVRSYLYAKGRSGEYRETQYLLSKTVHSFTDETQQSRRAKPRGEVQGTLRDMW 586

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BLAST of mRNA_P-littoralis_Contig183.90.2 vs. uniprot
Match: A0A6H5JV64_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV64_9PHAE)

HSP 1 Score: 791 bits (2042), Expect = 3.650e-281
Identity = 403/518 (77.80%), Postives = 453/518 (87.45%), Query Frame = 0

Query:    2 GQNKLTVRQRLEIVRAVQGGQQRSKVAQDFGVGKAYITKLMKPERIASLEKSRDMELNLDAKRTPTPVNADLEARLNQWIKIARQRFE---LGLSGLMIQTQATRFASDMNVTDFTASNGWLHRFLGRYGFAHINLHGEAGDVDRGKAEREIAKIREQLEEFDVELIFNMDETGLFYRCFPRGTYVTRAEGAAGVNKKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVFRHVRKPPCPYYAQQSAWLDSSICQRWFDEVFVPFVKKNTGKKVVLLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKSQYKTEMVIRLAALIEDWDTVRARKIRRGCRGLSDAGQATMLDVTEILSQKWESFSDQTIVRCWLKATILPREHEDALKGRDTRLDREDK-DAAALDDLCDMVKKMSMPESAKGLDARSMPRLLSDNLFVESASGLTEQEVRSAVETWLSVEDDEEVLREEVELEMEEVTENISRVAVENDASSEEEDQDG 515
            GQNKLT  QRL++VR VQ G+QRSKVA  +GV  +YI+KLMKP+++A L KSRD ELNLDA RTPTPV+ DLE RL QWIK+AR RFE   +GLSG+MIQTQAT+FAS+M   DFTAS GWLHRFL RYGF HINLHGEAGDVD+ K E +IAKIREQLE FDVELIFNMDETGLF+RCFPRGTYVTRAE AAGVN+KTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVI TAK+PMVFRH+R+ P PYY+QQSAWLDS++CQRWFDEVFVPFVKK TGKKVVLLWDNCPGHKIKNDDPQI+IIFLPPNVTSVFQPMDMG+LFALK QYKTEMV RLA LI+ WD VRARKIRRGCRGL+DAGQATMLDVTEILS+KWESFS QT++RCWLKA ILPREHE+ALKG+DTRLDREDK D A +DDLC+MV KMSMP SA   D+RS  R+L+DNLFVE ASGLT+ EVR AV+TWLSVEDD EVL EE+ +E++ V E ++ V +++D  SEEED DG
Sbjct:  166 GQNKLTTGQRLQLVRDVQAGKQRSKVAATYGVTTSYISKLMKPDKLAELHKSRDSELNLDALRTPTPVHDDLEKRLLQWIKVARARFETTKIGLSGIMIQTQATKFASEMGKKDFTASKGWLHRFLKRYGFKHINLHGEAGDVDKTKYEEQIAKIREQLEGFDVELIFNMDETGLFFRCFPRGTYVTRAEDAAGVNRKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVISTAKNPMVFRHIRRSPIPYYSQQSAWLDSTLCQRWFDEVFVPFVKKTTGKKVVLLWDNCPGHKIKNDDPQIIIIFLPPNVTSVFQPMDMGILFALKCQYKTEMVARLADLIDVWDAVRARKIRRGCRGLNDAGQATMLDVTEILSEKWESFSSQTVIRCWLKANILPREHENALKGKDTRLDREDKEDTAIIDDLCEMVSKMSMPASAT--DSRSTARVLTDNLFVEKASGLTDAEVRQAVKTWLSVEDDPEVLEEEIAMELQAVDEQLAGVTLDDDVPSEEEDDDG 681

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BLAST of mRNA_P-littoralis_Contig183.90.2 vs. uniprot
Match: A0A6H5JV34_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV34_9PHAE)

HSP 1 Score: 693 bits (1788), Expect = 1.820e-245
Identity = 372/536 (69.40%), Postives = 415/536 (77.43%), Query Frame = 0

Query:   86 QRFELGLSGLMIQTQATRFASDMNVTDFTASNGWLHRFLGRYGFAHINLHGEAGDV---------------------------------DRGKAEREIAKIREQLEEFDVELIFNMDETGLFYRCFPRGTYVTRAEGAAGVNKKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVFRHVRKPPCPYYAQQSAWLDSSICQRWFDEVFVPFVKKNTGKKVVLLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKSQYKTEMVIRLAALIEDWDTVRARKIRRGCRGLSDAGQATMLDVTEILSQKWESFSDQTIVRCWLKATILPREHEDALKGRDTRLDREDKDAAALDDLCDMVKKMSMPESAKGLDARSMPRLLSDNLFVESASGLTEQEVRSAVETWLSVEDDEEVLREEVELEMEEVTENISRVAVENDASSEEEDQDGRQESCMKSTISEAEVRSRLEDVRSYLYANGNDGEYSETVYLLSKTVHSFTHETQVKRRAKEGGEVQATLRDMW 588
            Q  +LGLSG+MI+TQAT+FA+++NVT+FTAS+GWLHRFL RYG  HINLHGEAGD                                  ++  AE+EIA+I EQL+ FDVELIFNM+ETGLF+RCFPRGTYVTR+E AAG+N+KTARGSKAMKAKDRCTVV+CCNTTGSLKVPLAVIHTAKDPMVFRHVRKP CPYYAQ+S WLDSS+CQRWFDEVFVPFVKK TGKKV LLWDNCPGH+IKNDDPQIVIIFLPPNVTSVFQPMDMG                                   CRGL++AGQ TMLDVTEILSQKWESF DQT++RCWLKATILP EHE ALK +DTRLDRED  AAALDDLCDMV+KMSMPE AK LDARS PR+ ++NLFVESASGLTE EVRSA+ TWLSVEDD+EVLR+EVELEMEEVTEN+S V VE D SSEEE   GR     KSTIS  +VRSR+EDVRS+LY +  DGE+SET +LL K    FTH+TQVKRRAKE GEVQATL DMW
Sbjct:    2 QTTKLGLSGIMIRTQATKFAAEINVTNFTASDGWLHRFLSRYGLVHINLHGEAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKAAAEKEIAQIWEQLQGFDVELIFNMEETGLFHRCFPRGTYVTRSESAAGLNQKTARGSKAMKAKDRCTVVSCCNTTGSLKVPLAVIHTAKDPMVFRHVRKPACPYYAQKSGWLDSSLCQRWFDEVFVPFVKKTTGKKVALLWDNCPGHRIKNDDPQIVIIFLPPNVTSVFQPMDMG-----------------------------------CRGLNEAGQPTMLDVTEILSQKWESFLDQTVIRCWLKATILPGEHESALKDKDTRLDREDPWAAALDDLCDMVEKMSMPECAKDLDARSKPRVWTENLFVESASGLTE-EVRSAMRTWLSVEDDKEVLRDEVELEMEEVTENMSNVHVEEDVSSEEEGDHGRPV-VHKSTISTGKVRSRVEDVRSFLYTHERDGEFSETAHLLPK----FTHDTQVKRRAKEWGEVQATLWDMW 496

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BLAST of mRNA_P-littoralis_Contig183.90.2 vs. uniprot
Match: A0A6H5KA74_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA74_9PHAE)

HSP 1 Score: 669 bits (1725), Expect = 2.370e-232
Identity = 371/616 (60.23%), Postives = 418/616 (67.86%), Query Frame = 0

Query:    2 GQNKLTVRQRLEIVRAVQGGQQRSKVAQDFGVGKAYITKLMKPERIASLEKSRDMELNLDAKRTPTPVNADLEARLNQWIKIARQRF------------------------------------ELGLSGLMIQTQATRFASDMNVTDFTASNGWLHRFLGRYGFAHINLHGEAGDVDRGKAEREIAKIREQLEEFDVELIFNMDETGLFYRCFPRG--------------------------------------------------------------------------------------------TYVTRAEGAAGVNKKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVFRHVRKPPCPY--YAQQSAWLDSSICQRWFDEVFVPFVKKNTGKKVVLLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKSQYKTEMVIRLAALIEDWDTVRARKIRRGCRGLSDAGQATMLDVTEILSQKWESFSDQTIVRCWLKATILPREHEDALKGRDTRLDREDKDAAALDDLCDMVKKMSMPESAKGLDARSMPRLLSDNLFVESASGLTEQEVRSAVETWLSVEDDEEVLREEVE 487
            G+NKLT+ QR +IV AV+GG+QRSKVA D+ VGKAY++KLMKP  IA+LEK+RD+ELN+ AKRTPTP++A+LE                                                  +LGLSG+MIQTQAT+FA++MNVT+FTASNGWLHRF  RYG  HINLHGEAGDV++  AE+EIA+IREQLE FDVELIFNMDETGLF+RCFPRG                                                                                            TYVTR+EGAAG+N+KTARGSKAMKAKDRCTVVACCNTTGSLKVPLA+IHTAKDPMVFR VRKP CPY  YAQ+SAWLDS++CQRWFDEVFVPFVKK TGKK+ LLWDNCPGH+IKNDDPQIVIIFLPPNVTSVFQPMDMG+LFALK QYKT+M++R                     GL+DAGQ TMLDVTEILSQKWESFSDQT++RCWLKATILP EHE ALK  DTRLDRED  AAALDDL DMV+KMSMPESAK LDARS PR+L+DNLFVESASGLTE EVRSAV TWLSVEDDEE LR+EV+
Sbjct:  120 GENKLTIAQRWKIVEAVRGGRQRSKVAADYNVGKAYVSKLMKPPMIAALEKARDIELNMGAKRTPTPIHAELEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTKLGLSGIMIQTQATKFAAEMNVTNFTASNGWLHRFFSRYGLVHINLHGEAGDVNKAAAEKEIAQIREQLEGFDVELIFNMDETGLFHRCFPRGMYVTRSEGAAGLNQKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAIIHXEGFDVELIFNMDETGLFYRCFXXXXXXXXXXXXXXXXXXPRGTYVTRSEGAAGLNQKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAIIHTAKDPMVFRQVRKPACPYLYYAQKSAWLDSALCQRWFDEVFVPFVKKTTGKKMALLWDNCPGHRIKNDDPQIVIIFLPPNVTSVFQPMDMGILFALKCQYKTKMLMR---------------------GLNDAGQPTMLDVTEILSQKWESFSDQTVIRCWLKATILPGEHESALKDNDTRLDREDPGAAALDDLYDMVEKMSMPESAKDLDARSKPRVLTDNLFVESASGLTE-EVRSAVRTWLSVEDDEENLRDEVD 713

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BLAST of mRNA_P-littoralis_Contig183.90.2 vs. uniprot
Match: A0A6H5K0Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Y4_9PHAE)

HSP 1 Score: 575 bits (1481), Expect = 3.130e-197
Identity = 324/578 (56.06%), Postives = 383/578 (66.26%), Query Frame = 0

Query:    2 GQNKLTVRQRLEIVRAVQGGQQRSKVAQDFGVGKAYITKLMKPERIASLEKSRDMELNLDAKRTPTPVNADLEARLNQWIKIARQRFELGLSGLMIQ----------------------------TQATRFASDMNVTDFTASNGWLHRFLGRYGFAHINLHGEAGDVDRGKAEREIAKIREQLEEFDVELIFNMDETGLFYRCFPRGTYVTRAEGAAGVNKKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVFRHVRKPPCPYYAQQSAWLDSSICQRWFDEVFVPFVKKNTGKKVVLLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKSQYKTEMVIRLAALIEDWDTVRARKIRRGCRGLSDAGQATMLDVTEILSQKWESFSDQTIVRCWLKATILPREHEDALKGRDTRLDREDKD-AAALDDLCDMVKKMSMPESAKGLDARSMPRLLSDNLFVESASGLTEQEVRSAVETWLSVEDDEEVLREEVELEMEEVTENISRVAVENDASSEEEDQDGRQESCMKSTISEAEVRSRLEDVRSYLYANGNDGEY 550
            G+NKL++ QRL IV+ VQGG +RS VA  + VG  Y +K M PE+IA L+K RDMELN DA R P PV+ ++E +L +WIKIAR RF++     ++                              QA + A+ M  T+F A+NGWLHRFL RY F H+ LHGEAGDVD+ K   E  +IREQL+EFDVE I NMDETGLF+RCFPRGT VTR E AAGVN KTARGSKAM AKDRCTVVACCNTTGS   PLAVI T+K PMVFR                                        +V  LWDNCPGHKIK++DP IVI FLPP V SV+QPMDM +LF LK QYKTEMV RLA L+EDWDT                  ATMLDVTEI SQKW SF  QT++RCWLKA ILPREH + LKG DTRLDREDKD AA +D LCDMV KMSMP S    D  SMPR+L+DNLFVE+ + LTEQEVR+AV+TWLSVEDD EV  E VELE++ V  +++ + +++D SSEE D DGR ESC+ S+++E +V SRLEDVRSY+YA G  GEY
Sbjct:   90 GKNKLSMTQRLRIVKEVQGGTKRSMVAAKWSVGTWYTSKFMNPEKIAELKKIRDMELNQDALRAPRPVHDEVEEKLRKWIKIARARFDVSTHFALVMCWSGYNLVAYTPITFRPYTSSHSRPSCWAQALKIAAQMGKTNFKATNGWLHRFLKRYSFTHVQLHGEAGDVDKQKVAEEFERIREQLQEFDVEFICNMDETGLFFRCFPRGTRVTRGEAAAGVNSKTARGSKAMNAKDRCTVVACCNTTGSQMAPLAVISTSKKPMVFR----------------------------------------QVAFLWDNCPGHKIKSNDPHIVINFLPPYVNSVYQPMDMSILFVLKCQYKTEMVARLADLMEDWDT------------------ATMLDVTEICSQKWRSFDVQTVIRCWLKAGILPREHCNVLKGMDTRLDREDKDNAAIIDGLCDMVSKMSMPASVT--DHGSMPRVLTDNLFVETGADLTEQEVRTAVKTWLSVEDDPEVFEEAVELELQAVERDLAGLEMDDDVSSEEGDGDGRPESCISSSLTEGKVVSRLEDVRSYMYAKGRGGEY 607

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BLAST of mRNA_P-littoralis_Contig183.90.2 vs. uniprot
Match: A0A6H5JLK3_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLK3_9PHAE)

HSP 1 Score: 551 bits (1420), Expect = 2.590e-190
Identity = 277/364 (76.10%), Postives = 304/364 (83.52%), Query Frame = 0

Query:   89 ELGLSGLMIQTQATRFASDMNVTDFTASNGWLHRFLGRYGFAHINLHGEAGDVDRGKAEREIAKIREQLEEFDVELIFNMDETGLFYRCFPRGTYVTRAEGAAGVNKKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVFRHVRKPPCPYYAQQSAWLDSSICQRWFDEVFVPFVKKNTGKKVVLLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKSQYKTEMVIRLAALIEDWDTVRARKIRRGCRGLSDAGQATMLDVTEILSQKWESFSDQTIVRCWLKATILPREHEDALKGRDTRLDREDKDAAALDDLCDMVKKMSMPESAKGLDARSMPRLLSDNL 452
            +LGLSG+MIQTQA + A++MNVT FTASNGWLHRFL RYG  HINLHGEAGDV++  AE++IA+IREQLE FDVELIFNMDETGLF+RC         + GA G+N+K ARGSKAMKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVFRH                      RWFD+VFVPFVKK TGKKV LLWDNCPGH+IKNDDPQIVIIFLPPNV SVFQPMDMG+LFALK QYKTEMV+RLAALIEDWDT RAR+IR GCRGL+DAGQ TMLDVTE+LSQKWESFSDQT++RCWLKATI P EHE ALK  DTRLDRED  A ALDDLCDMV+KMSMPESAK LDARS PR+L+DN+
Sbjct:    5 KLGLSGIMIQTQAPKLAAEMNVTHFTASNGWLHRFLSRYGLVHINLHGEAGDVNKAAAEKKIAQIREQLEGFDVELIFNMDETGLFHRC---------SRGAPGLNQKNARGSKAMKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVFRH----------------------RWFDKVFVPFVKKTTGKKVALLWDNCPGHRIKNDDPQIVIIFLPPNVMSVFQPMDMGILFALKCQYKTEMVMRLAALIEDWDTARARQIRTGCRGLNDAGQPTMLDVTEVLSQKWESFSDQTVIRCWLKATIRPGEHESALKDNDTRLDREDPGATALDDLCDMVEKMSMPESAKDLDARSKPRVLTDNM 337

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BLAST of mRNA_P-littoralis_Contig183.90.2 vs. uniprot
Match: A0A6H5KIE7_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIE7_9PHAE)

HSP 1 Score: 513 bits (1321), Expect = 1.010e-176
Identity = 266/366 (72.68%), Postives = 304/366 (83.06%), Query Frame = 0

Query:  204 MKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVFRHVRKPPCPYYAQQSAWLDSSICQRWFDEVFVPFVKKNTGKKVVLLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKSQYKTEMVIRLAALIEDWDTVRARKIRRGCRGLSDAGQATMLDVTEILSQKWESFSDQTIVRCWLKATILPREHEDALKGRDTRLDREDKD-AAALDDLCDMVKKMSMPESAKGLDARSMPRLLSDNLFVESASGLTEQEVRSAVETWLSVEDDEEVLREEVELEMEEVTENISRVAVENDASSEEEDQDGRQESCMKSTISEAEVRSRLEDVRSYLYANGNDGEYSETVYLLSKTVHSFTHET 568
            MKAKDR T+VACCNTTGSL VP AVI T+K  MVFRHVRKPPC Y+ Q+SAWLD++ICQ WFD+VFVPFVK  T KKV LLWDNCPGHKIK++DPQIVIIFLPP +TSV+QPMDMG+LF LK +YKTEMV RLA LIEDWDTVRARK +RGC+GLSDAGQATMLDVTEI SQKW SF  QT++ CWLKA ILPREH + LKG DTR+DREDKD AA +D LCDMV KM+MP S  G   RSMPR+L+DNL VE  + LTEQEVR+AV+TWL+VEDD EVL EEVELE+  V  +I+ + +++D SSEE D DGR ESC+ S+++E EV SRLEDVRSYLYA G  GEY ET YLLSKTVHSFTHET
Sbjct:    1 MKAKDRWTMVACCNTTGSLMVPFAVISTSKKTMVFRHVRKPPCSYFDQESAWLDAAICQ-WFDKVFVPFVKGKTSKKVALLWDNCPGHKIKSNDPQIVIIFLPPEITSVYQPMDMGILFVLKCRYKTEMVARLADLIEDWDTVRARKFQRGCQGLSDAGQATMLDVTEIGSQKWRSFDVQTVITCWLKAGILPREHCNVLKGMDTRVDREDKDDAAIIDGLCDMVSKMAMPASVTGY--RSMPRVLTDNLLVEKGTDLTEQEVRTAVKTWLTVEDDPEVLEEEVELELHAVERDIAGLEMDDDVSSEEGDGDGRPESCITSSLTEGEVISRLEDVRSYLYAKGRGGEYRETQYLLSKTVHSFTHET 363

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BLAST of mRNA_P-littoralis_Contig183.90.2 vs. uniprot
Match: A0A6H5K549_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K549_9PHAE)

HSP 1 Score: 493 bits (1270), Expect = 1.930e-167
Identity = 275/483 (56.94%), Postives = 325/483 (67.29%), Query Frame = 0

Query:   27 VAQDFGVGKAYI-TKLMKPERIASLEKSRDMELNLDAKRTPTPVNADLEARLNQWIKIARQRF----------------------------------------ELGLSGLMIQTQATRFASDMNVTDFTASNGWLHRFLGRYGFAHINLHGEAGDVDRGKAEREIAKIREQLEEFDVELIFNMDETGLFYRCFPRGTYVTRAEGAAGVNKKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVFRHVRKP------PCPYYAQQSAWLDSSICQRWFDEVFVPFVKKNTGKKVVLLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKSQYKTEMVIRLAALIEDWDTVRARKIRRGCRGLSDAGQATMLDVTEILSQKWESFSDQTIVRCWLKATILPREHEDALKGRDTRLDREDKD-AAALDDLCDMVKKMSMPESAKGLDARSMPRLLSDNLFVESASGLT 461
            V   + VG +YI +KL+ PE+IA LEK RDMELN DA R P PV+ ++E +L +WIKIAR+R                                         ++G+SG MIQ QA + A+ M   +F A+NGWLHRFL RY F ++ L G+AGDVD+ K   EI +IREQL+EFDVE IFNMDE GLF+RCFPRGT+VTR + AAGVN KTARGSKAMKAKDRCTVVACCNT GSL VPLAVI T++  M+FRHVRK       P    A++S     ++         +PFVK  T KK  LLWDNCPGHKI+++D Q+VII LPPNVTS++QP DMG+LF LK QYK E+V RLA LIEDWDTVRARK +RGCRGLSDAGQATMLDVTEI SQKW                ILPREH + LKG DTRLDRE KD AA +D LCDMV KMSMP SA   D RSMPR+L++NLFVE  + LT
Sbjct:    2 VGAKWNVGTSYIISKLVDPEKIAELEKVRDMELNQDALRAPKPVHDEVEEKLRKWIKIARERSNVSTYLALVMCWSGYNLVVYTPTPFRPYTSSHSRPSCWATKIGVSGSMIQAQALKIAAQMGKANFKATNGWLHRFLKRYSFTYVQLRGKAGDVDKQKVAEEIERIREQLQEFDVEFIFNMDEMGLFFRCFPRGTHVTRGQAAAGVNSKTARGSKAMKAKDRCTVVACCNTIGSLMVPLAVISTSRKSMIFRHVRKTAMSLLRPGECLARRSHL--PAVTSSRTGTPSIPFVKGKTSKKEALLWDNCPGHKIESNDSQVVIILLPPNVTSIYQPTDMGILFVLKCQYKAEVVARLADLIEDWDTVRARKTQRGCRGLSDAGQATMLDVTEICSQKWH---------------ILPREHCNVLKGMDTRLDREAKDDAAIMDGLCDMVSKMSMPASAT--DYRSMPRVLTNNLFVEKGTDLT 465

[Close]

BLAST of mRNA_P-littoralis_Contig183.90.2 vs. uniprot
Match: A0A6H5KFG9_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFG9_9PHAE)

HSP 1 Score: 492 bits (1266), Expect = 2.000e-167
Identity = 251/364 (68.96%), Postives = 283/364 (77.75%), Query Frame = 0

Query:   50 LEKSRDMELNLDAKRTPTPVNADLEARLNQWIKIARQRF---ELGLSGLMIQTQATRFASDMNVTDFTASNGWLHRFLGRYGFAHINLHGEAGDVDRGKAEREIAKIREQLEEFDVELIFNMDETGLFYRCFPRGTYVTRAEGAAGVNKKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVFRHVRKPPCPYYAQQSAWLDSSICQRWFDEVFVPFVKKNTGKKVVLLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKSQYKTEMVIRLAALIEDWDTVRARKIRRGCRGLSDAGQATMLDVTEILSQKWESFSDQTIVRCWLKATILPREHEDALKGRDTRL 410
            L K+  MELN +A+R P PV A+LE R+ +WIKIA++RF   ++GLSG MIQ +A +FAS+M +    ASNGWLHR L R    HINLHGEAGDVD+ K + +IA+  EQL EFDVE IFNMDET LFYRCFPRGTYVTR E AAGVNK TARGSKAMKA                 VPLAVI TA +PMVFR VR+ PCPYYAQ SAWLD+S+CQRWFDEVFVPFVK  T +KV L WDNCPGHKI N+DPQIVIIFLPP VTSVFQPMDMG LF LK Q K EMV+RL+ +IEDWDTVRAR I RGC+GLSDAGQAT LDV EIL+QKWESFSDQT+VRCW KATILP EHE+  K +DTRL
Sbjct:   16 LNKAVQMELNPEARRVPEPVEAELEQRVLKWIKIAQERFMTTKIGLSGTMIQHRAVKFASEMGIK-LAASNGWLHRSLKRCQLKHINLHGEAGDVDQEKVQEKIAQTEEQLNEFDVEFIFNMDETALFYRCFPRGTYVTRQEDAAGVNKNTARGSKAMKAX----------------VPLAVIGTAANPMVFRKVRELPCPYYAQASAWLDASLCQRWFDEVFVPFVKSKTARKVTLTWDNCPGHKIINNDPQIVIIFLPPLVTSVFQPMDMGALFTLKCQNKPEMVVRLSDVIEDWDTVRARNIPRGCQGLSDAGQATTLDVAEILTQKWESFSDQTVVRCWPKATILPEEHENVFKRKDTRL 362

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig183.90.2 vs. uniprot

BLAST of mRNA_P-littoralis_Contig183.90.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JEY2_9PHAE	3.580e-308	78.04	HTH CENPB-type domain-containing protein n=2 Tax=E...	[more]
A0A6H5JNS8_9PHAE	1.070e-291	71.84	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]
A0A6H5JV64_9PHAE	3.650e-281	77.80	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]
A0A6H5JV34_9PHAE	1.820e-245	69.40	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]
A0A6H5KA74_9PHAE	2.370e-232	60.23	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]
A0A6H5K0Y4_9PHAE	3.130e-197	56.06	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JLK3_9PHAE	2.590e-190	76.10	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]
A0A6H5KIE7_9PHAE	1.010e-176	72.68	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5K549_9PHAE	1.930e-167	56.94	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]
A0A6H5KFG9_9PHAE	2.000e-167	68.96	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 143..163
None	No IPR available	COILS	Coil	Coil	coord: 476..503
None	No IPR available	GENE3D	1.10.10.60		coord: 71..127 e-value: 1.7E-13 score: 52.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 499..524
None	No IPR available	PANTHER	PTHR19303	TRANSPOSON	coord: 8..350
None	No IPR available	PANTHER	PTHR19303:SF17	TIGGER TRANSPOSABLE ELEMENT-DERIVED PROTEIN 7	coord: 8..350
IPR006600	HTH CenpB-type DNA-binding domain	SMART	SM00674	cenpb	coord: 67..133 e-value: 8.8E-11 score: 51.8
IPR006600	HTH CenpB-type DNA-binding domain	PFAM	PF03221	HTH_Tnp_Tc5	coord: 70..131 e-value: 7.2E-12 score: 45.1
IPR006600	HTH CenpB-type DNA-binding domain	PROSITE	PS51253	HTH_CENPB	coord: 61..133 score: 12.98941
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 143..393 e-value: 5.9E-8 score: 34.4
IPR004875	DDE superfamily endonuclease domain	PFAM	PF03184	DDE_1	coord: 207..389 e-value: 4.3E-33 score: 114.4
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 64..128

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig183	contig	P-littoralis_Contig183:407204..409511 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig183.90.2	mRNA_P-littoralis_Contig183.90.2	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig183 407204..409511 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig183.90.2 ID=prot_P-littoralis_Contig183.90.2|Name=mRNA_P-littoralis_Contig183.90.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=591bp
LGQNKLTVRQRLEIVRAVQGGQQRSKVAQDFGVGKAYITKLMKPERIASL
EKSRDMELNLDAKRTPTPVNADLEARLNQWIKIARQRFELGLSGLMIQTQ
ATRFASDMNVTDFTASNGWLHRFLGRYGFAHINLHGEAGDVDRGKAEREI
AKIREQLEEFDVELIFNMDETGLFYRCFPRGTYVTRAEGAAGVNKKTARG
SKAMKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVFRHVRKPPCPYYA
QQSAWLDSSICQRWFDEVFVPFVKKNTGKKVVLLWDNCPGHKIKNDDPQI
VIIFLPPNVTSVFQPMDMGVLFALKSQYKTEMVIRLAALIEDWDTVRARK
IRRGCRGLSDAGQATMLDVTEILSQKWESFSDQTIVRCWLKATILPREHE
DALKGRDTRLDREDKDAAALDDLCDMVKKMSMPESAKGLDARSMPRLLSD
NLFVESASGLTEQEVRSAVETWLSVEDDEEVLREEVELEMEEVTENISRV
AVENDASSEEEDQDGRQESCMKSTISEAEVRSRLEDVRSYLYANGNDGEY
SETVYLLSKTVHSFTHETQVKRRAKEGGEVQATLRDMWAT*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006600	HTH_CenpB_DNA-bd_dom
IPR036397	RNaseH_sf
IPR004875	DDE_SF_endonuclease_dom
IPR009057	Homeobox-like_sf