prot_P-littoralis_Contig183.78.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig183.78.1
Unique Nameprot_P-littoralis_Contig183.78.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length187
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig183.78.1 vs. uniprot
Match: D7FMP4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMP4_ECTSI)

HSP 1 Score: 94.4 bits (233), Expect = 9.420e-21
Identity = 71/110 (64.55%), Postives = 82/110 (74.55%), Query Frame = 0 
Query:   73 SLSSSRDGRGLQRAPDSTDRGSLFSDGRTTRSLSGASSAASLTPCSSTCTPRETSRTTTTMAMSTARAEATLAVLEAERAQLEHRLKKVEDELRQEQLMTMKESRKRGKR 182
            S SSS+ GRGL  A      GS    GRTT     +S+A SLT  + T TPRET RTTTTMAMSTARAEATLAVLEAERAQLEHRLKKVEDELRQE++++ + ++KRG R
Sbjct:   87 SFSSSKGGRGLPSAY----CGSGVPSGRTTSRSLTSSAAISLTDYA-TDTPRETVRTTTTMAMSTARAEATLAVLEAERAQLEHRLKKVEDELRQERILSKENNKKRGHR 191
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig183.78.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FMP4_ECTSI9.420e-2164.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 137..171
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..83
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..111
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig183contigP-littoralis_Contig183:373529..375024 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig183.78.1mRNA_P-littoralis_Contig183.78.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig183 373529..375024 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig183.78.1 ID=prot_P-littoralis_Contig183.78.1|Name=mRNA_P-littoralis_Contig183.78.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=187bp
HHWQHGVTPRFSSGPTREQIKGHKPNPKSAAATATAPPLMSRSSKISQGS
ARNAEQTAETQRSARSTATTVASLSSSRDGRGLQRAPDSTDRGSLFSDGR
TTRSLSGASSAASLTPCSSTCTPRETSRTTTTMAMSTARAEATLAVLEAE
RAQLEHRLKKVEDELRQEQLMTMKESRKRGKRRTVR*
back to top