prot_P-littoralis_Contig183.47.4 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig183.47.4
Unique Nameprot_P-littoralis_Contig183.47.4
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length980
Homology
BLAST of mRNA_P-littoralis_Contig183.47.4 vs. uniprot
Match: A0A6H5K212_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K212_9PHAE)

HSP 1 Score: 637 bits (1642), Expect = 3.440e-208
Identity = 506/989 (51.16%), Postives = 550/989 (55.61%), Query Frame = 0
Query:    3 GGSGGASLFDMVMSGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSQIMPERTRLSVAATTGARAEGGKPVASSLSGMLGGMRGLQPAXXXXXXXXXTPMGNSNKVAEKDGSAGSGRRGDVGGDSSEDWMAINLEKLSNFRVPETRMGYPDGAREGLRRSATAPSRSSGLFREQADGGAAAGGLRSSAEAXXXTAAAGGTGELRWQFGCSHPLGRRRQPQQAXXXXXXXXXXXXXXXXXSLSGXXXXXXXXATRAKEISGEACSRLGTTVAASASXXXXXXXXXGTARHGRTAPPFPLPPSSPPLPPPDFPLRTRVRFEMAPGVPVPPGIGSLPGHLEFRALKAFAAGGMKIGTHQXXXXXXXXXXXXXXXXXXXXXGSAGRDGMGAGSNG---------ESEDEGVEDGXXXXXXXXXXXRRRG-RGFGGADS-------AVPXXXXXXXXXXXXXAKIKEETDNAMEAWRKATLYWEHPATALPPEALAAQKAAQARVAKNPAHATRAQDNGNRPGGSAASGWASFFWSRRRDWQQAFCSLYYGLISRKGDGXXXXXXXXXXXXXXXXXXXVGESHAEEGFYLQCPRYTVLWRLARESGGADGEGGNGRLIPAAAMTRSTRRLRKRLTAAGIEFKMPLDPAGDERDVQA---DEDVLEEWKAMDATGNAKPGAVYANDEDRSRPHLSLLTFRGHMAVHGLFDFILEACGHP---MGGGXXXXXVXXXXXXXXXXXXXXXRMGAGGDVPLLLSREPFLNASLKALKVRQNGPMHRSRAAKSAKSGGEDSVVQVLELVGHVLPSALGDLSLAMAAACTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGEGDKATAA--PRGRAXXXXXGEGERGLEKTGPTTASRRSSGVSXXXXXXXXXXXXXXXXXXXXAQAESPRAAAPAAGHGKALFRAVGSVDPDTAHLNAGFGALEKE 966
            GG GGASLFDMVMSG S                                           R+RLSVAA TGARAEGGKPVASSLSGMLGGMRG QPA                   +++G   + R   V   S+EDWMA NLEKLSNFRVPETR+G+P+G REGLRRSATAPSRS    R +             AE     AAAG  GE RW+FGC HPLGR ++                                                                  GT R    AP  PL  S    PPPD PLRTRVRFEMAPGV VP GIGSLPGHLE RAL+AFAAG + +                         G   R G+G G            ++   GV  G              G RG GG ++       A  XXXXXXXXXXXXX     + + AME WRKATLYWEHPAT LP EALAAQK+AQ+RVAK+PAHAT+AQD+G RPGGSAASGW SFFWSRRRDW+QAF SLYYGLISR   G      XXXXXXXXX      E    EGFYLQCP YTV WRL RE GGA+ EG   RL+PAA MTRSTRRLRKRLTAAGIEF MPLDPAGD+RD QA   DEDVLEEWKAMDATGNAKPGAVYAN+EDRSRP LSLLTFRGHMAVHGLFDF+LEACGH    +GGG                     RMG+GGDVPLLLSREPFLNASLKALKVRQ GPMHRSRA  SA   G+DS VQVLELVGHVLPSAL DL+LAMA+ACT          XXXXXXXXXXXXXXXXXXXXXXXXX                    G    ATA   PR R                 P   ++ ++GV                         SP AAA     G ALFRAVG VDPDT HLNAGF AL +E
Sbjct:  305 GGGGGASLFDMVMSGVSSCSPQSSIGGGESNGG---------------------------RSRLSVAAATGARAEGGKPVASSLSGMLGGMRGRQPAASGR---------------DEEGCGVAARGAGVDQTSTEDWMAKNLEKLSNFRVPETRVGFPEGGREGLRRSATAPSRSPFPPRPE----------EQQAETPQVGAAAGRAGEPRWEFGCWHPLGRGQREDAPVSD-----------------------------------------------------------GT-RLNVEAPDNPLSSS----PPPDLPLRTRVRFEMAPGVAVPRGIGSLPGHLESRALRAFAAGSLGMRNRSED-------------------GGVSRQGLGRGGXXXXXXXXXXEQAWSSGVTGGGSVGGRRARRAETLGERGRGGHEAGANDGTAAXXXXXXXXXXXXXXXXXXXXKEEEAMEKWRKATLYWEHPATPLPQEALAAQKSAQSRVAKSPAHATKAQDSGARPGGSAASGWTSFFWSRRRDWEQAFGSLYYGLISRNRGGGEGARGXXXXXXXXXAAEGEREG---EGFYLQCPLYTVAWRLVRERGGAEDEGT--RLVPAAVMTRSTRRLRKRLTAAGIEFGMPLDPAGDQRDAQASHADEDVLEEWKAMDATGNAKPGAVYANEEDRSRPQLSLLTFRGHMAVHGLFDFLLEACGHSTGVVGGGGLAAS------------GRGGRMGSGGDVPLLLSREPFLNASLKALKVRQKGPMHRSRATVSA---GQDSAVQVLELVGHVLPSALADLALAMASACTAGRNLGDNSNXXXXXXXXXXXXXXXXXXXXXXXXXGAA----------------GGVSKPATAGLGPRRRQ----------------PPPEAQATAGVYAKDARGKNHVGDDG----------SPTAAAAGPERGPALFRAVGGVDPDTTHLNAGFEALLEE 1096          
BLAST of mRNA_P-littoralis_Contig183.47.4 vs. uniprot
Match: D7FXK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXK2_ECTSI)

HSP 1 Score: 590 bits (1521), Expect = 6.890e-197
Identity = 420/743 (56.53%), Postives = 456/743 (61.37%), Query Frame = 0
Query:   63 RTRLSVAATTGARAEGGKPVASSLSGMLGGMRGLQPAXXXXXXXXXTPMGNSNKVAEKDGSAGSGRRGDVGGDSSEDWMAINLEKLSNFRVPETRMGYPDGAREGLRRSATAPSRSSGLFREQADGGAAAGGLRSSAEAXXXTAAAGGTGELRWQFGCSHPLGRRRQPQQAXXXXXXXXXXXXXXXXXSLSGXXXXXXXXATRAKEISGEACSRLGTTVAASASXXXXXXXXXGTARHGRTAPPFPLPPSSPPLPPPDFPLRTRVRFEMAPGVPVPPGIGSLPGHLEFRALKAFAAGGMKIGTHQXXXXXXXXXXXXXXXXXXXXXGSAGRDGMGAGSNG----ESEDE----------GVEDGXXXXXXXXXXXRRRGRGFGGAD-----SAVPXXXXXXXXXXXXXAKIKEETDNAMEAWRKATLYWEHPATALPPEALAAQKAAQARVAKNPAHATRAQDNGNRPGGSAASGWASFFWSRRRDWQQAFCSLYYGLISRKGDGXXXXXXXXXXXXXXXXXXXVGESHAEEGFYLQCPRYTVLWRLARESGGADGEGGNGR-LIPAAAMTRSTRRLRKRLTAAGIEFKMPLDPAGDERDVQADEDVLEEWKAMDATGNAKPGAVYANDEDRSRPHLSLLTFRGHMAVHGLFDFILEACGHP---MGGGXXXXXVXXXXXXXXXXXXXXXRMGAGGDVPLLLSREPFLNASLKALKVRQNGPMHRSRAAKSAKSGGEDSVVQV 782
            R+RLSVAA TGARAEGGKPVASSLSGMLGGMRG QPA              S++  E+ G A  G    VG  S+EDWMAINLEKLSNFRVPETRMG+P+G REGLRRSATAPSRS   F  +A+           AE     AAAG  GE RW+FGC HPLGR +Q QQ                                           R    V+             GT R    AP  PL  SSPP  P D PLRTRVRFEMAPGV VP GIGSLPGHLE RAL+AFAAG + +                         G   R G+G G       +SE E          G   G           R R R   GA+     +AV    XXXXXXXXXX   ++E D AME WRKATLYWEHPAT LP EALAAQKAAQ+RVAK+PAHAT+AQD+G RPGGSAASGW SFFWSRRRDW+QAF SLYYGLISR   G        XXXXXXXXXXX         FYLQCP YTV+W L RE GGA+ +G   R L+PAA MTRSTRRLRKRLTAAGIEF MPLDPAGD+RD QADEDVLEEWKAMDATGNAKPGAVYAN+EDRSRP LSLLTFRGHMAVHGLFDF+LEACGH    +GGG                     RMG GGDVPLLLSREPFLNASLKALKV+Q GPMHRSRA  SA   G+DS VQV
Sbjct:   24 RSRLSVAAATGARAEGGKPVASSLSGMLGGMRGRQPAA-------------SSRDEERCGVAARGAG--VGQTSTEDWMAINLEKLSNFRVPETRMGFPEGGREGLRRSATAPSRSP--FPPRAE--------EKQAETRQAGAAAGRAGEPRWEFGCWHPLGRGQQQQQ------------------------------------------QRQDAPVS------------DGT-RLTDEAPDNPLS-SSPPXXP-DLPLRTRVRFEMAPGVAVPRGIGSLPGHLESRALRAFAAGSVGMRNRSED-------------------GGDPRQGLGRGGGNXXXXDSEKEQGWSSGVAGGGSVGGRRARLAETLGERGRDRHEAGANDGTAGTAVAIEAXXXXXXXXXXXXERKE-DEAMEKWRKATLYWEHPATPLPQEALAAQKAAQSRVAKSPAHATKAQDSGARPGGSAASGWTSFFWSRRRDWEQAFGSLYYGLISRNRGGGEGARGGRXXXXXXXXXXXXXXXXXX--FYLQCPLYTVVWTLVRERGGAEDDGTRRRRLVPAALMTRSTRRLRKRLTAAGIEFGMPLDPAGDQRDAQADEDVLEEWKAMDATGNAKPGAVYANEEDRSRPQLSLLTFRGHMAVHGLFDFLLEACGHSTGVVGGGGLAAS------------GRGGRMGLGGDVPLLLSREPFLNASLKALKVQQKGPMHRSRATVSA---GQDSAVQV 647          
BLAST of mRNA_P-littoralis_Contig183.47.4 vs. uniprot
Match: A0A835YIS8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIS8_9STRA)

HSP 1 Score: 121 bits (303), Expect = 6.830e-25
Identity = 109/369 (29.54%), Postives = 164/369 (44.44%), Query Frame = 0
Query:  452 AKIKEETDNAMEAWRKATLYWEHPATALPPEALAAQKAAQARVAKNPAHATRAQDNGNRPGGSAASGWASFFWSRRRDWQQAFCSLYYGLISRKGDGXXXXXXXXXXXXXXXXXXXVGESHAEEGFYLQCPRYTVLWRLARESGGADGEGGNGRLIPAAAMTRSTRRLRKRLTAAGIEFKMPLDPAGDERDVQADEDVLEEWKAMDATGNAKPGAVYANDEDRS-RPHLSLLTFRGHMAVHGLFDFILEACGHPMGGGXXXXXVXXXXXXXXXXXXXXXRMGAGGDVPLLLSREPFLNASLKALKVRQNGPMHRSRAAKSAKSGGE-----------------DSVVQVLELVGHVLPSALGDLSLAMA 802
            A  +    NA+  W+ AT+YW HPATALPP A++AQ  A   +++      RA       G  + +GW++F+  RR+DWQ+AF SL+Y L S                         G++ +   FYL+   +T  +    ++        +G+   AA +TRS+R+ R++LT AG+ F MPLD     R V AD    +   A  A    +  + Y   ++ S RPH +LL  R   ++  L++  LE  G P GGG                       G   DVPLLL+  PFL+A+L+ L+ R +G      A      GG+                  ++   LEL G +LP  +  L+ A A
Sbjct:  117 AAARANVANAVSEWQAATMYWVHPATALPPSAMSAQGRAMDVLSQADVALERAPH-----GMESITGWSAFYLVRRQDWQEAFRSLFYSLWSPGPTAAAHPGGTGGNGG--------GDACS---FYLRTVTHTTFFHATTDA--------SGQRSVAAVITRSSRQSRRQLTDAGVAFAMPLDTTNAHRHVSADP--ADAAAAAAALARLRDESAYVGRDNASARPHTTLLLVRSQESLVALYEAELERWG-PQGGGGGLVA------------------GKAQDVPLLLAARPFLHATLRRLQPRVSG------AIAGLARGGQRXXXXXXXXXXXXXXXGGTLTHQLELAGPMLPCTVRRLAAAAA 434          
BLAST of mRNA_P-littoralis_Contig183.47.4 vs. uniprot
Match: A0A433PW49_9FUNG (Uncharacterized protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PW49_9FUNG)

HSP 1 Score: 65.9 bits (159), Expect = 7.140e-8
Identity = 59/207 (28.50%), Postives = 93/207 (44.93%), Query Frame = 0
Query:  610 AAMTRSTRRLRKRLTAAGIEFKMPL--------DPAGDERDVQAD--EDVLEEWKAMDATGNAKPGAVYANDEDR--SRPHLSLLTFRGHMAVHGLFDFILEACGHPMGGGXXXXXVXXXXXXXXXXXXXXXRMGAGGDVPLLLSREPFLNASLKALKVRQNGPMHRSRAAKSAKSGGEDSVVQVLELVGHVLPSALGDLSLAMAAA 804
            A + +STR LRK L    I F++PL        DP  D  D  A+  E+VL E   ++     +PG+      DR       S+L FRGHM VHGLF+F+L                                  + G  P+L++   FLNA++K  ++ +NG + R     S       ++ ++ ++ G++LP++L  L L +A A
Sbjct:    9 AVLNKSTRGLRKALEKEDIPFELPLNRSANDNIDPNADAMDADANNNENVLAELGKLE---ELQPGSTRVVQRDRIVGNARRSVLVFRGHMGVHGLFNFLLN------------------------WRDNRVEFRSRGP-PMLVAPCVFLNATVKQAEITRNGTIRRMTTDPSTNRSAMQTLYRI-DIDGYLLPTSLYALLLTVARA 186          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig183.47.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5K212_9PHAE3.440e-20851.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXK2_ECTSI6.890e-19756.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YIS8_9STRA6.830e-2529.54Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A433PW49_9FUNG7.140e-828.50Uncharacterized protein n=1 Tax=Endogone sp. FLAS-... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 218..240
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 304..322
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 361..431
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 155..195
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..140
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 811..980
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 823..842
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 294..323
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 96..111
NoneNo IPR availablePANTHERPTHR12972:SF0PROTEIN DOWNSTREAM NEIGHBOR OF SONcoord: 577..805
NoneNo IPR availablePANTHERPTHR12972:SF0PROTEIN DOWNSTREAM NEIGHBOR OF SONcoord: 455..540
IPR024861DonsonPANTHERPTHR12972DOWNSTREAM NEIGHBOR OF SONcoord: 455..540
IPR024861DonsonPANTHERPTHR12972DOWNSTREAM NEIGHBOR OF SONcoord: 577..805

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig183contigP-littoralis_Contig183:225951..233246 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig183.47.4mRNA_P-littoralis_Contig183.47.4Pylaiella littoralis U1_48mRNAP-littoralis_Contig183 225949..233246 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig183.47.4 ID=prot_P-littoralis_Contig183.47.4|Name=mRNA_P-littoralis_Contig183.47.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=980bp
GGGGSGGASLFDMVMSGASCSSQPSSGGGGTGGGNSGGSRGASDGSIGSG
GGGGGDSQIMPERTRLSVAATTGARAEGGKPVASSLSGMLGGMRGLQPAP
PPPPPPIPTPMGNSNKVAEKDGSAGSGRRGDVGGDSSEDWMAINLEKLSN
FRVPETRMGYPDGAREGLRRSATAPSRSSGLFREQADGGAAAGGLRSSAE
ASAATAAAGGTGELRWQFGCSHPLGRRRQPQQAQQAHTTAAAAGTTSVAV
SLSGREAAAAAAATRAKEISGEACSRLGTTVAASASASAATAAAAGTARH
GRTAPPFPLPPSSPPLPPPDFPLRTRVRFEMAPGVPVPPGIGSLPGHLEF
RALKAFAAGGMKIGTHQHQHQQEYGSHRQQRRRRRQRPGSAGRDGMGAGS
NGESEDEGVEDGGGGDIGGGDAGRRRGRGFGGADSAVPAAAAAAAEDEAA
AAKIKEETDNAMEAWRKATLYWEHPATALPPEALAAQKAAQARVAKNPAH
ATRAQDNGNRPGGSAASGWASFFWSRRRDWQQAFCSLYYGLISRKGDGGG
GGGGGGGGGGGGGGGGGVGESHAEEGFYLQCPRYTVLWRLARESGGADGE
GGNGRLIPAAAMTRSTRRLRKRLTAAGIEFKMPLDPAGDERDVQADEDVL
EEWKAMDATGNAKPGAVYANDEDRSRPHLSLLTFRGHMAVHGLFDFILEA
CGHPMGGGGGGGGVAGGAGSSGGGGGAGGRMGAGGDVPLLLSREPFLNAS
LKALKVRQNGPMHRSRAAKSAKSGGEDSVVQVLELVGHVLPSALGDLSLA
MAAACTAGGNNSSSSGSSSGSSSNDEDDDEDDDDEDDDDYRQSENGDGGV
TAAAAAAAAASGEGDKATAAPRGRAAAATAGEGERGLEKTGPTTASRRSS
GVSAAENRKGGGPPPCRPPATTAAQAESPRAAAPAAGHGKALFRAVGSVD
PDTAHLNAGFGALEKESACPPSAKRDGGEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024861Donson