prot_P-littoralis_Contig183.22.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig183.22.1
Unique Nameprot_P-littoralis_Contig183.22.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length105
Homology
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BLAST of mRNA_P-littoralis_Contig183.22.1 vs. uniprot
Match: D8LFC4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFC4_ECTSI)

HSP 1 Score: 63.9 bits (154), Expect = 8.490e-10
Identity = 35/88 (39.77%), Postives = 49/88 (55.68%), Query Frame = 0 
Query:   20 RLSSIVRAAGDASEESEALPLAVSPRCVQPGCERDGSLVMVTCDICNGALHRSCGA---TTDDDDEECE-PGHRCTTCATRSGKRKHA 103
            R   + RA  D S  S  LP+   P C++P C   G++ MV+C+ICNG +HR CG    T +DD E  +  G RC+ CA  +  +K A
Sbjct:  213 RHGDLGRAEADTSAASANLPVIYCPACIEPECNMSGNMSMVSCNICNGNIHRFCGVLGGTRNDDGETNDFEGTRCSPCAAANKGKKRA 300
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig183.22.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LFC4_ECTSI8.490e-1039.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 45..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig183contigP-littoralis_Contig183:162937..163251 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig183.22.1mRNA_P-littoralis_Contig183.22.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig183 162937..163266 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig183.22.1 ID=prot_P-littoralis_Contig183.22.1|Name=mRNA_P-littoralis_Contig183.22.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=105bp
MRDPPPVAMPAPSVHALRDRLSSIVRAAGDASEESEALPLAVSPRCVQPG
CERDGSLVMVTCDICNGALHRSCGATTDDDDEECEPGHRCTTCATRSGKR
KHAG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011011Znf_FYVE_PHD